Citrus Sinensis ID: 019139

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM
Secondary Structure (PSIPRED)
ccccccEEEEEEEEEEccccccEEEEEEEccccccEEEEEEEEEEEcccccEEEEcccccccccccccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccccEEEccEEEEEEEEccccccEEEEEccEEEEEcccccccEEEEEcccccccccEEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccEEEccccccccHHHHHHHHccccccEEEEEEEcHHHHHHHHHHccccccEEEEEEEcccccEEEEcccccccccEEEEEEcccccccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHcccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccHc
Coil and Loop (DISEMBL)
MSTEGQVITCKAavawepnkplviedvqvappqagEVRIKILFTALChtdaytwsgkdpeglfpcilgheAAGIVesvgegvtevqpgdhvipcyqaecreckfcksgktnlcgkvrgatgagvmmndrksrfsingkpiyhfmgtstfsQYTVVHdvsvakidpqapldkvcllgcgvptglgavwntakvepgsivAVFGLGTVGLAVAEGAKaagasrvigididpkkfdraknfgvtefvnpkdhdkpiQQVLVDLtdggvdysfecIGNVSVMRAALECCHKGWGTSVIVGVAasgqeistrpfqlvtgrvwkgtafggfksrsqvpWLVDKYMKKVNLM
Flexible Loop (DISEMBL)
mstegqvitckaavawepnkpLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFcksgktnlcgkvrgatgagvmmndRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGakaagasrvigididpkkfdRAKNFGVtefvnpkdhdkpIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAsgqeistrpfqlvtgrvWKGTafggfksrsqvpwlvdkYMKKVNLM
Low Complexity Region (SEG)
MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVglavaegakaagaSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM
Disordered region (IsUnstruct)
******VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMK*****
Disordered Region (DISOPRED)
****GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM
Disordered Region (DISEMBL)
MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM
Disordered Region (DISPRO)
****GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVN**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.985	0.892	0.938	0.0
Q0DWH1	381	Alcohol dehydrogenase cla	yes	no	0.985	0.892	0.935	0.0
Q96533	379	Alcohol dehydrogenase cla	yes	no	0.988	0.899	0.926	0.0
P93629	381	Alcohol dehydrogenase cla	N/A	no	0.982	0.889	0.941	0.0
P80572	378	Alcohol dehydrogenase cla	N/A	no	0.985	0.899	0.897	0.0
P79896	376	Alcohol dehydrogenase cla	N/A	no	0.985	0.904	0.712	1e-142
P81601	375	Alcohol dehydrogenase cla	N/A	no	0.982	0.904	0.688	1e-138
P81600	375	Alcohol dehydrogenase cla	N/A	no	0.982	0.904	0.688	1e-138
Q54TC2	379	Alcohol dehydrogenase cla	yes	no	0.985	0.897	0.700	1e-136
Q3ZC42	374	Alcohol dehydrogenase cla	yes	no	0.971	0.895	0.708	1e-135

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/340 (93%), Positives = 330/340 (97%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST+GQVITCKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4   STQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 303

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+ K
Sbjct: 304 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNK 343

Oryza sativa subsp. indica (taxid: 39946)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 4

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/340 (93%), Positives = 330/340 (97%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST+GQVITCKAAVAWE N+P+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4   STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 303

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+ K
Sbjct: 304 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNK 343

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/341 (92%), Positives = 330/341 (96%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPE
Sbjct: 1   MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G G+MMNDRKSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVP
Sbjct: 121 GVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVP 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVEPGS VA+FGLGTVGLAVAEGAK AGASR+IGIDID KK++ AK FGV
Sbjct: 181 TGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
            EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS
Sbjct: 241 NEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLV+KYM K
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK 341

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/339 (94%), Positives = 330/339 (97%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGL
Sbjct: 5   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG 
Sbjct: 65  FPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGV 124

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTG
Sbjct: 125 GVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTG 184

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
           LGAVWNTAKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTE
Sbjct: 185 LGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTE 244

Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
           FVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC  KGWGTSVIVGVAASGQ
Sbjct: 245 FVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQ 304

Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           EISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKK
Sbjct: 305 EISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKK 343

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/340 (89%), Positives = 324/340 (95%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T+GQVITCKAAVAWEPNKPL IEDV+VAPPQA EVRI+ILFTALCHTDAYT  GKDPEG
Sbjct: 1   ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEG 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG
Sbjct: 61  LFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATG 120

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMM DRKSRFS+ GKPIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPT
Sbjct: 121 VGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPT 180

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID  K+D AKNFGVT
Sbjct: 181 GLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVT 240

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 241 EFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASG 300

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+KK
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKK 340

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P79896|ADHX_SPAAU Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1

 Score =  506 bits (1302), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/341 (71%), Positives = 280/341 (82%), Gaps = 1/341 (0%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M T G+VI CKAAVAWEP KPL IE+V+VAPP A EVRIK+  T +CHTDAYT SG DPE
Sbjct: 1   METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFP ILGHE AG VESVGEGVT+ +PGD VIP Y  +C ECKFCK+ KTNLC K+R   
Sbjct: 61  GLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQ 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G G ++ D+ SRF+  GK ++HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+ 
Sbjct: 121 GQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGIS 179

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TG GA  NTAKVEPGS  AVFGLG VGLAV  G K AGA+R+IGID++P KF+ AK FG 
Sbjct: 180 TGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGA 239

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEFVNPKDH KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI+GVA +
Sbjct: 240 TEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGA 299

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGG+KS   VP LV+ YM K
Sbjct: 300 GQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSK 340

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Sparus aurata (taxid: 8175)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P81601|ADHL_GADMO Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1

 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/340 (68%), Positives = 279/340 (82%), Gaps = 1/340 (0%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T G+ I C+AAVAWE  KPL +E+V+VAPPQAGEVRIKI+ T +CHTDAYT SG DPEG
Sbjct: 1   ATVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEG 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           +FP +LGHE AGIVESVGEGVT+ + GD VIP Y  +C ECKFCK+ KTNLC K+R   G
Sbjct: 61  VFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQG 120

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G+M N   SRFS NG+ ++HFMG+STFS+YTVV ++S+AK+  +APLDKVCLLGC + T
Sbjct: 121 KGLMPNG-TSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAIST 179

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           G GA  NTAKVE GS  AVFGLG +GLAV  G +AAGASR+I ID++P KF  AK FG T
Sbjct: 180 GYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGAT 239

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           + VNPKDH KP++QVLV++TDGGVDYSFEC+GN++VMRAALE CHKGWGTSVI+GVAA+G
Sbjct: 240 DLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAG 299

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGR WKGTAFGG+KS   VP LV++YM K
Sbjct: 300 QEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNK 339

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Gadus morhua (taxid: 8049)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P81600|ADHH_GADMO Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/340 (68%), Positives = 277/340 (81%), Gaps = 1/340 (0%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T GQVI CKAAVAWE  KPL +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG
Sbjct: 1   ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEG 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            FP ILGHE AG+VESVGEGVT+ + GD VIP Y  +C ECKFCK+ KTNLC K+R   G
Sbjct: 61  AFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQG 120

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +M D  SRF+  GK ++HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ T
Sbjct: 121 RG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGIST 179

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           G GA  NTAKVEPGS  AVFGLG VGLA   G K AGA+R+IG+DI+P+KF +A  FG T
Sbjct: 180 GYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGAT 239

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NPKDH +P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI+GVA +G
Sbjct: 240 ECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAG 299

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEI+TRPFQLVTGRVWK TAFGG+KS   VP LV+ YM K
Sbjct: 300 QEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNK 339

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Gadus morhua (taxid: 8049)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q54TC2|ADHX_DICDI Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1

 Score =  484 bits (1245), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/344 (70%), Positives = 272/344 (79%), Gaps = 4/344 (1%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           MSTEG+VITCKAAVAWE  KPLVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPE
Sbjct: 1   MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           G+FPCILGHE  GIVES+GEGVT V+ GDHVIP Y  EC  CKFC S KTNLC K+R   
Sbjct: 61  GIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQ 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G G  M D  +RF   GK I+HFMGTSTFSQYTV+ ++S   +   APLDKVCLLGCG+ 
Sbjct: 121 GKG-QMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGIT 179

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TG GA   TAKVE GS VA+FGLG VGL+VA+GA   GA R+IGID +  KF   K+FG 
Sbjct: 180 TGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGC 239

Query: 241 TEFVNP-KD--HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
           TEF+NP KD    K IQQ LVD+TDGGVDYSFECIGNV+VMRAALECCHKGWG S IVGV
Sbjct: 240 TEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGV 299

Query: 298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           A +G EISTRPFQLVTGRVWKG+AFGG KSRSQ+P ++DKYM K
Sbjct: 300 APAGAEISTRPFQLVTGRVWKGSAFGGVKSRSQLPSIIDKYMDK 343

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q3ZC42|ADHX_BOVIN Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1

 Score =  483 bits (1242), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/336 (70%), Positives = 272/336 (80%), Gaps = 1/336 (0%)

Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           QVI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG +P 
Sbjct: 4   QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPV 63

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
           M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182

Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
             N AKVEPGS  AVFGLG VGLAV  G K AGA+R+IG+DI+  KF RAK FG +E +N
Sbjct: 183 ALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECIN 242

Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIA 302

Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
255585914	379	alcohol dehydrogenase, putative [Ricinus	0.988	0.899	0.947	0.0
353703786	379	alcohol dehydrogenase class III [Solanum	0.988	0.899	0.941	0.0
429840534	378	alcohol dehydrogenase 2 [Diospyros kaki]	0.988	0.902	0.944	0.0
433286663	396	Chain A, Crystal Structure Of S-nitrosog	0.985	0.858	0.941	0.0
224065517	379	glutathione-dependent formaldehyde dehyd	0.988	0.899	0.944	0.0
242063486	381	hypothetical protein SORBIDRAFT_04g03705	0.985	0.892	0.947	0.0
195621922	381	alcohol dehydrogenase class 3 [Zea mays]	0.982	0.889	0.946	0.0
325910821	379	glutathione-dependent formaldehyde dehyd	0.988	0.899	0.944	0.0
194688556	381	unknown [Zea mays] gi|194707152|gb|ACF87	0.982	0.889	0.946	0.0
148886774	381	RecName: Full=Alcohol dehydrogenase clas	0.985	0.892	0.938	0.0

>gi|255585914|ref|XP_002533630.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223526488|gb|EEF28759.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/341 (94%), Positives = 336/341 (98%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+T+GQVI CKAAVA+EPNKPLVIEDVQVAPPQAGEVR++ILFTALCHTDAYTWSGKDPE
Sbjct: 1   MATQGQVIICKAAVAYEPNKPLVIEDVQVAPPQAGEVRVQILFTALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR+CKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRDCKFCKSGKTNLCGKVRAAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVP 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KK+DRAK+FGV
Sbjct: 181 TGLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKYDRAKDFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct: 241 TEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|353703786|ref|NP_001238796.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|283825505|gb|ADB43258.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|322719690|gb|ADX07743.1| alcohol dehydrogenase class III [Solanum habrochaites] gi|322719692|gb|ADX07744.1| alcohol dehydrogenase class III [Solanum chmielewskii]

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/341 (94%), Positives = 336/341 (98%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPE
Sbjct: 1   MATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPC+LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVP 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGV
Sbjct: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct: 241 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVP LVDKY+KK
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKK 341

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|429840534|gb|AGA15794.1| alcohol dehydrogenase 2 [Diospyros kaki]

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/341 (94%), Positives = 332/341 (97%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+T+GQVITCKAAVAWEPNKPL IEDVQVAPPQAGEVRI+ILFTALCHTDAYTWSGKDPE
Sbjct: 1   MATQGQVITCKAAVAWEPNKPLAIEDVQVAPPQAGEVRIQILFTALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPCILGHEAAGIVESVGEGVTEV PGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCILGHEAAGIVESVGEGVTEVHPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G GVMMNDRKSRFSING PIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGTPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLEKVCLLGCGVP 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGV
Sbjct: 181 TGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDTAKNFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAAS
Sbjct: 241 TEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSRS VPWLVDKY+KK
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSHVPWLVDKYLKK 341

Source: Diospyros kaki

Species: Diospyros kaki

Genus: Diospyros

Family: Ebenaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|433286663|pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286664|pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286665|pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286666|pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286667|pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione gi|433286668|pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/340 (94%), Positives = 335/340 (98%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPEG
Sbjct: 19  ATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEG 78

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPC+LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 79  LFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 138

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPT
Sbjct: 139 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPT 198

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGVT
Sbjct: 199 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVT 258

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 259 EFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 318

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVP LVDKY+KK
Sbjct: 319 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKK 358

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065517|ref|XP_002301836.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa] gi|222843562|gb|EEE81109.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa]

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/341 (94%), Positives = 333/341 (97%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+T+GQVITC+AAVAWE NKPLVIE+VQVAPPQAGEVR+KILF ALCHTDAYTWSGKDPE
Sbjct: 1   MATQGQVITCRAAVAWEANKPLVIEEVQVAPPQAGEVRVKILFAALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRTAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVP 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK AGASR+IGIDID KKFDRAK+FGV
Sbjct: 181 TGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDRAKDFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEFVNPKDHDKPIQQVL+DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS
Sbjct: 241 TEFVNPKDHDKPIQQVLIDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVP LVDKYMKK
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPMLVDKYMKK 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242063486|ref|XP_002453032.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor] gi|241932863|gb|EES06008.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor]

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/340 (94%), Positives = 332/340 (97%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4   STQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAG+VESVGEGVTEVQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG
Sbjct: 64  LFPCILGHEAAGVVESVGEGVTEVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATG 123

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPT
Sbjct: 124 VGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPT 183

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDNKKFDVAKNFGVT 243

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG
Sbjct: 244 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 303

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEI+TRPFQLVTGRVWKGTAFGGFKSR+QVPWLVDKYM K
Sbjct: 304 QEIATRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMNK 343

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195621922|gb|ACG32791.1| alcohol dehydrogenase class 3 [Zea mays]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/339 (94%), Positives = 332/339 (97%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGL
Sbjct: 5   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG 
Sbjct: 65  FPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGV 124

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTG
Sbjct: 125 GVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTG 184

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
           LGAVWNTAKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTE
Sbjct: 185 LGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTE 244

Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
           FVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALECCHKGWGTSVIVGVAASGQ
Sbjct: 245 FVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECCHKGWGTSVIVGVAASGQ 304

Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           EISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKK
Sbjct: 305 EISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKK 343

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325910821|dbj|BAJ83825.1| glutathione-dependent formaldehyde dehydrogenase [Epipremnum aureum]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/341 (94%), Positives = 330/341 (96%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M+TE QVITCKAAVAWE NKPL IEDV VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE
Sbjct: 1   MATEAQVITCKAAVAWEANKPLAIEDVLVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
           GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
           G G+MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGV 
Sbjct: 121 GVGIMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVA 180

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TGLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK AGASR+IGIDID KKFD AKNFGV
Sbjct: 181 TGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDVAKNFGV 240

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TEFVNPKD++KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS
Sbjct: 241 TEFVNPKDYEKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK
Sbjct: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341

Source: Epipremnum aureum

Species: Epipremnum aureum

Genus: Scindapsus

Family: Araceae

Order: Alismatales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194688556|gb|ACF78362.1| unknown [Zea mays] gi|194707152|gb|ACF87660.1| unknown [Zea mays] gi|194707766|gb|ACF87967.1| unknown [Zea mays] gi|413939458|gb|AFW74009.1| putative alcohol dehydrogenase superfamily protein [Zea mays]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/339 (94%), Positives = 332/339 (97%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGL
Sbjct: 5   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG 
Sbjct: 65  FPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGV 124

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTG
Sbjct: 125 GVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTG 184

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
           LGAVWNTAKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTE
Sbjct: 185 LGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTE 244

Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
           FVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ
Sbjct: 245 FVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 304

Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           EI+TRPFQLVTGRVWKGTAFGGFKSR+QVPWLVDKYMKK
Sbjct: 305 EIATRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKK 343

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148886774|sp|A2XAZ3.1|ADHX_ORYSI RecName: Full=Alcohol dehydrogenase class-3; AltName: Full=Alcohol dehydrogenase class-III; AltName: Full=Glutathione-dependent formaldehyde dehydrogenase; Short=FALDH; Short=FDH; Short=GSH-FDH; AltName: Full=S-(hydroxymethyl)glutathione dehydrogenase gi|125541608|gb|EAY88003.1| hypothetical protein OsI_09425 [Oryza sativa Indica Group]

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/340 (93%), Positives = 330/340 (97%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST+GQVITCKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4   STQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 303

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLV+KY+ K
Sbjct: 304 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNK 343

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.985	0.904	0.689	2.6e-127
UNIPROTKB|F1NI89	370	ADH5 "Uncharacterized protein"	0.976	0.910	0.693	6.3e-124
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.976	0.901	0.693	6.3e-124
UNIPROTKB|F1NKS6	362	ADH5 "Uncharacterized protein"	0.976	0.930	0.693	6.3e-124
DICTYBASE|DDB_G0281865	379	adh5 "alcohol dehydrogenase, c	0.985	0.897	0.677	8e-124
UNIPROTKB|F1PLM5	376	F1PLM5 "Uncharacterized protei	0.971	0.890	0.693	8e-124
UNIPROTKB|J9PA83	374	ADH5 "Uncharacterized protein"	0.971	0.895	0.693	8e-124
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.971	0.895	0.684	2.1e-123
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.971	0.895	0.687	4.4e-123
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.971	0.895	0.690	5.7e-123

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
 Identities = 235/341 (68%), Positives = 268/341 (78%)

Query:     1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
             M T G+VI CKAAVAWE  KPL IE+V+VAPP+A EVR+KI  T +CHTDAYT SG DPE
Sbjct:     1 MDTTGKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPE 60

Query:    61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
             GLFP ILGHE AG VESVGEGVT+ +PGD VIP Y  +C ECKFCK+ KTNLC K+R   
Sbjct:    61 GLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQ 120

Query:   121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
             G G +M D  SRF+  GK ++HFMGTSTFS+YTVV ++S+AK+D  APLDKVCLLGCG+ 
Sbjct:   121 GQG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGIS 179

Query:   181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
             TG GA  NTAKVE GS  AVFGLG V             +R+IGID++P KF+ AK FG 
Sbjct:   180 TGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGA 239

Query:   241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
             TEFVNPKDH KPIQ+VLV+LTDGGVDYSFECIGNV +MRAALE CHKGWGTSVI+GVA +
Sbjct:   240 TEFVNPKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGA 299

Query:   301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             GQEISTRPFQLVTGR WKGTAFGG+KS   VP LV+ YM K
Sbjct:   300 GQEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNK 340

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
 Identities = 235/339 (69%), Positives = 266/339 (78%)

Query:     7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
             VI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:    67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
             LGHE AGIVESVGEGVT+V+PGD VIP Y  +C ECK+CK+ KTNLC K+R   G G +M
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKG-LM 119

Query:   127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
              D   RF+  GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA 
Sbjct:   120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179

Query:   187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              NTAKVEPGS  AVFGLG V             SR+IGIDI+   + +AK FG  E ++P
Sbjct:   180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239

Query:   247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
             +D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEIST
Sbjct:   240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 299

Query:   307 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
             RPFQLVTGR WKGTAFGG+KS   VP LV+ YM KK+ +
Sbjct:   300 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKV 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
 Identities = 235/339 (69%), Positives = 266/339 (78%)

Query:     7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
             VI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct:     5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 64

Query:    67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
             LGHE AGIVESVGEGVT+V+PGD VIP Y  +C ECK+CK+ KTNLC K+R   G G +M
Sbjct:    65 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKG-LM 123

Query:   127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
              D   RF+  GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA 
Sbjct:   124 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 183

Query:   187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              NTAKVEPGS  AVFGLG V             SR+IGIDI+   + +AK FG  E ++P
Sbjct:   184 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 243

Query:   247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
             +D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEIST
Sbjct:   244 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 303

Query:   307 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
             RPFQLVTGR WKGTAFGG+KS   VP LV+ YM KK+ +
Sbjct:   304 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKV 342

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NKS6 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
 Identities = 235/339 (69%), Positives = 266/339 (78%)

Query:     7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
             VI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:    67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
             LGHE AGIVESVGEGVT+V+PGD VIP Y  +C ECK+CK+ KTNLC K+R   G G +M
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKG-LM 119

Query:   127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
              D   RF+  GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA 
Sbjct:   120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179

Query:   187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              NTAKVEPGS  AVFGLG V             SR+IGIDI+   + +AK FG  E ++P
Sbjct:   180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239

Query:   247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
             +D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAA+GQEIST
Sbjct:   240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 299

Query:   307 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
             RPFQLVTGR WKGTAFGG+KS   VP LV+ YM KK+ +
Sbjct:   300 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKV 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

DICTYBASE|DDB_G0281865 adh5 "alcohol dehydrogenase, class 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
 Identities = 233/344 (67%), Positives = 262/344 (76%)

Query:     1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
             MSTEG+VITCKAAVAWE  KPLVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPE
Sbjct:     1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPE 60

Query:    61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
             G+FPCILGHE  GIVES+GEGVT V+ GDHVIP Y  EC  CKFC S KTNLC K+R   
Sbjct:    61 GIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQ 120

Query:   121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
             G G  M D  +RF   GK I+HFMGTSTFSQYTV+ ++S   +   APLDKVCLLGCG+ 
Sbjct:   121 GKG-QMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGIT 179

Query:   181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
             TG GA   TAKVE GS VA+FGLG V              R+IGID +  KF   K+FG 
Sbjct:   180 TGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGC 239

Query:   241 TEFVNP-KD--HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
             TEF+NP KD    K IQQ LVD+TDGGVDYSFECIGNV+VMRAALECCHKGWG S IVGV
Sbjct:   240 TEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGV 299

Query:   298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             A +G EISTRPFQLVTGRVWKG+AFGG KSRSQ+P ++DKYM K
Sbjct:   300 APAGAEISTRPFQLVTGRVWKGSAFGGVKSRSQLPSIIDKYMDK 343

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
 Identities = 233/336 (69%), Positives = 265/336 (78%)

Query:     6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
             QVI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct:     6 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 65

Query:    66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
             ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct:    66 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 124

Query:   126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
             M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct:   125 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 184

Query:   186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
               NTAKVEPGS  AVFGLG V             SR+IG+DI+  KF RAK FG +E +N
Sbjct:   185 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 244

Query:   246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
             P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAASG+EI+
Sbjct:   245 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIA 304

Query:   306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             TRPFQLVTGRVWKGTAFGG+KS   VP LV +YM +
Sbjct:   305 TRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSR 340

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
 Identities = 233/336 (69%), Positives = 265/336 (78%)

Query:     6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
             QVI CKAAVAWE  KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63

Query:    66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
             ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122

Query:   126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
             M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct:   123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182

Query:   186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
               NTAKVEPGS  AVFGLG V             SR+IG+DI+  KF RAK FG +E +N
Sbjct:   183 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 242

Query:   246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
             P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SVIVGVAASG+EI+
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIA 302

Query:   306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             TRPFQLVTGRVWKGTAFGG+KS   VP LV +YM +
Sbjct:   303 TRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSR 338

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 230/336 (68%), Positives = 265/336 (78%)

Query:     6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
             +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct:     4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63

Query:    66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
             ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122

Query:   126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
             M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct:   123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182

Query:   186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
               NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +N
Sbjct:   183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242

Query:   246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
             P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302

Query:   306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
 Identities = 231/336 (68%), Positives = 264/336 (78%)

Query:     6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
             QVI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63

Query:    66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
             ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122

Query:   126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
             M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA
Sbjct:   123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 182

Query:   186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
               NTAKVEPGS  AVFGLG V             SR+IG+DI+  KF RAK FG +E +N
Sbjct:   183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 242

Query:   246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
             P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302

Query:   306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             TRPFQLVTGR WKGTAFGG+KS   +P LV +YM K
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSK 338

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
 Identities = 232/336 (69%), Positives = 263/336 (78%)

Query:     6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
             QVI CKAAVAWE  KPL IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct:     4 QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63

Query:    66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
             ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122

Query:   126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
             M D  SRF+  GKPI HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct:   123 MPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGA 182

Query:   186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
               NTAKVEPGS  AVFGLG V             SR+IGIDI+  KF +AK FG TE +N
Sbjct:   183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECIN 242

Query:   246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
             P+D  K IQ+VL+++TDGGVD+SFECIGNV VMR+ALE  HKGWG SV+VGVAASG+EIS
Sbjct:   243 PQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEIS 302

Query:   306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q1RFI7	FRMA_ECOUT	1, ., 1, ., 1, ., -	0.6515	0.9536	0.8915	yes	no
P80467	ADHX_UROHA	1, ., 1, ., 1, ., 2, 8, 4	0.7104	0.9681	0.8954	N/A	no
Q96533	ADHX_ARATH	1, ., 1, ., 1, ., 2, 8, 4	0.9266	0.9884	0.8997	yes	no
A7ZIA4	FRMA_ECO24	1, ., 1, ., 1, ., -	0.6545	0.9536	0.8915	yes	no
P25437	FRMA_ECOLI	1, ., 1, ., 1, ., -	0.6515	0.9536	0.8915	N/A	no
P73138	FRMA_SYNY3	1, ., 1, ., 1, ., -	0.6636	0.9536	0.8915	N/A	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.7023	0.9710	0.8957	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.6147	0.9855	0.8947	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.6147	0.9855	0.8947	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.9382	0.9855	0.8923	N/A	no
B1J085	FRMA_ECOLC	1, ., 1, ., 1, ., -	0.6545	0.9536	0.8915	yes	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.6176	0.9855	0.8947	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.7172	0.9710	0.8957	yes	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.5894	0.9884	0.8997	N/A	no
Q0TKS7	FRMA_ECOL5	1, ., 1, ., 1, ., -	0.6515	0.9536	0.8915	yes	no
P81601	ADHL_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.6882	0.9826	0.904	N/A	no
P81600	ADHH_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.6882	0.9826	0.904	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.9410	0.9826	0.8897	N/A	no
A7ZX04	FRMA_ECOHS	1, ., 1, ., 1, ., -	0.6545	0.9536	0.8915	yes	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.6058	0.9855	0.8947	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.6187	0.9884	0.8997	N/A	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.6117	0.9855	0.8947	N/A	no
Q0DWH1	ADHX_ORYSJ	1, ., 1, ., 1, ., 2, 8, 4	0.9352	0.9855	0.8923	yes	no
Q8X5J4	FRMA_ECO57	1, ., 1, ., 1, ., -	0.6545	0.9536	0.8915	N/A	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.8970	0.9855	0.8994	N/A	no
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.7088	0.9797	0.9037	yes	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.6436	0.9942	0.8932	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.7083	0.9710	0.8957	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.6842	0.9826	0.8944	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.7113	0.9710	0.8957	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.6246	0.9855	0.8900	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.6187	0.9884	0.8997	N/A	no
P79896	ADHX_SPAAU	1, ., 1, ., 1, ., 2, 8, 4	0.7126	0.9855	0.9042	N/A	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.6169	0.9826	0.8782	yes	no
O74540	FADH2_SCHPO	1, ., 1, ., 1, ., -	0.6409	0.9739	0.8842	yes	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.5988	0.9826	0.8921	N/A	no
Q3Z550	FRMA_SHISS	1, ., 1, ., 1, ., -	0.6545	0.9536	0.8915	yes	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.6047	0.9826	0.8921	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.6058	0.9855	0.8947	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.6041	0.9884	0.8997	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.6187	0.9884	0.8997	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.7113	0.9710	0.8957	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.7005	0.9855	0.8970	yes	no
P81431	ADHX_OCTVU	1, ., 1, ., 1, ., 2, 8, 4	0.6803	0.9855	0.8994	N/A	no
P80360	ADHX_MYXGL	1, ., 1, ., 1, ., 2, 8, 4	0.6607	0.9710	0.8909	N/A	no
P86884	ADHX_SCYCA	1, ., 1, ., 1, ., 2, 8, 4	0.6991	0.9797	0.8989	N/A	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.6217	0.9884	0.8997	N/A	no
A1A835	FRMA_ECOK1	1, ., 1, ., 1, ., -	0.6515	0.9536	0.8915	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
4th Layer	1.1.1.284	0.994
4th Layer	1.1.1.1	0.994
3rd Layer	1.1.1.73	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSH-FDH1	glutathione-dependent formaldehyde dehydrogenase (380 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XI.3391.1	pyruvate decarboxylase (EC-4.1.1.1) (574 aa)						•			0.899
	gw1.V.2645.1	hypothetical protein (479 aa)						•			0.899
	gw1.III.2325.1	SubName- Full=Putative uncharacterized protein; (514 aa)						•			0.899
	gw1.4555.2.1	annotation not avaliable (88 aa)						•			0.899
	gw1.134.62.1	hypothetical protein (453 aa)						•			0.899
	grail3.0005008802	aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa)						•			0.899
	fgenesh4_pg.C_LG_II000742	hypothetical protein (480 aa)						•			0.899
	eugene3.01840014	pyruvate decarboxylase (549 aa)						•			0.899
	eugene3.00060891	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVI0442	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	345
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	0.0
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	0.0
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	0.0
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	0.0
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-163
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-163
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-145
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-126
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	5e-95
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	3e-91
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-84
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	7e-67
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-60
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	3e-60
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	5e-60
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-54
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-54
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	4e-52
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	5e-48
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-47
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-46
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-46
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-45
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-45
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	9e-45
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	4e-43
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-43
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-41
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	8e-39
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-38
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	3e-37
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-36
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	4e-35
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	5e-35
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-34
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-33
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-33
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	9e-33
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-32
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-30
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	8e-30
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-28
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-28
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-27
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-27
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-26
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-26
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-26
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	1e-25
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-25
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-23
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-23
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-22
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	5e-22
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	5e-22
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-21
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-21
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-21
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	5e-20
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	9e-20
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	5e-19
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	7e-19
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	3e-18
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-18
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-17
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	5e-17
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	5e-17
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-17
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	6e-15
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	7e-15
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-14
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-14
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	9e-14
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	2e-12
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	6e-12
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	9e-12
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	1e-11
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-11
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	4e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	5e-11
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-10
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-09
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-09
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	4e-08
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-07
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-07
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-07
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-07
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	5e-07
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	7e-07
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	9e-07
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	3e-06
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	5e-06
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	9e-06
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	4e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	8e-05
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-04
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-04
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	3e-04
pfam02254	116	pfam02254, TrkA_N, TrkA-N domain	4e-04
cd01075	200	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d	5e-04
TIGR03026	409	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrog	8e-04
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	0.002
COG0677	436	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate de	0.003
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	0.003
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	0.003
pfam13578	105	pfam13578, Methyltransf_24, Methyltransferase doma	0.004

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  717 bits (1852), Expect = 0.0
 Identities = 268/334 (80%), Positives = 292/334 (87%), Gaps = 1/334 (0%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           ITCKAAVAWE  KPL IE+V+VAPP+AGEVRIKIL T +CHTDAYT SG DPEGLFP IL
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHE AGIVESVGEGVT V+PGDHVIP Y  EC ECKFCKSGKTNLC K+R   G G +M 
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKG-LMP 119

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
           D  SRFS  GKPIYHFMGTSTFS+YTVV ++SVAKI+P+APLDKVCLLGCGV TG GAV 
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVL 179

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
           NTAKVEPGS VAVFGLG VGLAV +GAKAAGASR+IGIDI+P KF+ AK FG T+ VNPK
Sbjct: 180 NTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239

Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 307
           DHDKPIQQVLV++TDGGVDY+FECIGNV VMRAALE CHKGWGTSVI+GVAA+GQEISTR
Sbjct: 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTR 299

Query: 308 PFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           PFQLVTGRVWKGTAFGG+KSRSQVP LV+ YMK 
Sbjct: 300 PFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKG 333

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  596 bits (1539), Expect = 0.0
 Identities = 225/334 (67%), Positives = 268/334 (80%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           ITCKAAVAWE  KPLVIE+V+VAPPQA EVRIKIL T+LCHTD Y W  K    LFP IL
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHEAAGIVESVGEGVT+++PGDHV+P +  EC+EC+ CKS K+N+C  +R  T  GVM+N
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
           D KSRFSINGKPIYHF+GTSTFS+YTVVH   VAKI+P+APLDKVCLL CGV TGLGA W
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
           N AKV+ GS VA+FGLG VGLAVAEGA+  GASR+IG+D++P KF++AK FGVTEFVNPK
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240

Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 307
           DHDKP+Q+V+ ++T GGVDYSFEC GN+  M +A EC H GWG +V++GV       ST 
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTH 300

Query: 308 PFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           P  L+ GR  KGT FGG+K ++ +P LV+KYMKK
Sbjct: 301 PMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKK 334

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  540 bits (1393), Expect = 0.0
 Identities = 225/330 (68%), Positives = 273/330 (82%), Gaps = 1/330 (0%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           +AAVAW   +PL IE+V V  PQ GEV ++I+ T +CHTDA+T SG DPEG+FP ILGHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
            AGIVE+VGEGVT V+ GDHVIP Y AEC ECKFC SGKTNLC  VR   G G+M  D  
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
           SRFS +G+PIYH+MG STFS+YTVV ++S+AKI+P APL++VCLLGCGV TG+GAV NTA
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181

Query: 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250
           KVE G  VAVFGLG +GL+V +GA+ A ASR+I IDI+P KF+ AK  G T+ VNP D+D
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241

Query: 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ 310
           KPIQ+V+V++TDGGVDYSFECIGNV+VMRAALECCHKGWG S+I+GVA +GQEISTRPFQ
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301

Query: 311 LVTGRVWKGTAFGGFKSRSQVPWLVDKYMK 340
           LVTGRVW+G+AFGG K R+++P +V++YMK
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMK 331

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  529 bits (1364), Expect = 0.0
 Identities = 216/334 (64%), Positives = 252/334 (75%), Gaps = 4/334 (1%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           I CKAAVAWE  KPLVIE+++VAPP+A EVRIK+L T++CHTD     G     LFP IL
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF-KATLFPVIL 59

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHE AGIVESVGEGVT ++PGD VIP +  +C EC  C+SGKTNLC K R A  +G +M 
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYR-ANESG-LMP 117

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
           D  SRF+  GK IYHF+GTSTFSQYTVV +  VAKIDP APL+ VCLLGCG  TG GA W
Sbjct: 118 DGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAW 177

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
           NTAKVEPGS VAVFGLG VGL+   GAK AGASR+IG+DI+  KF++AK FG T+F+NPK
Sbjct: 178 NTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237

Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 307
           D DKP+ +V+ ++T GGVDYSFEC GN  +M  ALE    GWG SV+VGV   G E+S R
Sbjct: 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIR 296

Query: 308 PFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           PFQL+ GR WKG+ FGGFKSRS VP LV KYM K
Sbjct: 297 PFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  510 bits (1315), Expect = 0.0
 Identities = 203/343 (59%), Positives = 250/343 (72%), Gaps = 3/343 (0%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T G+VI CKAAV WEP KP  IE+++VAPP+A EVRIKI+ T +C +D +  SGK     
Sbjct: 1   TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TP 59

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FP ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ C + ++NLC K       
Sbjct: 60  FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           G+M  D  SRF+  GKPI+HF+GTSTFS+YTVV +++VAKID  APL+KVCL+GCG  TG
Sbjct: 120 GLMQ-DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTG 178

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
            GA  NTAKV PGS  AVFGLG VGL+   G KAAGASR+I +DI+  KF +AK  G TE
Sbjct: 179 YGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238

Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M+AAL  CH+G+G SVIVGV  S Q
Sbjct: 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQ 298

Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
            +S  P  L+TGR WKG  FGG+KS+  VP LV  YM KK NL
Sbjct: 299 NLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNL 341

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  508 bits (1311), Expect = 0.0
 Identities = 212/333 (63%), Positives = 257/333 (77%), Gaps = 4/333 (1%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +  +AAVA E  KPL IE+V + PP+AGEV ++I  T +CHTDA+T SG DPEG FP +L
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHE AGIVE+VGEGVT V+PGDHVI  +  EC +CKFC SGK NLC  +R   G G M  
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP- 118

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
           D  +R S NG P+YH++G STF++YTVVH++S+ KIDP APL+K CLLGCGV TG+GAV 
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
           NTAKVEPG  VAVFGLG VGLA  +GAKAAGA R+I +DI+P+K + AK FG T FVNPK
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238

Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 307
           + D  + + +V+LTDGG DY+FEC+GNV VMR ALE  H+  GTSVI+GVA +GQEISTR
Sbjct: 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTR 296

Query: 308 PFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMK 340
           PFQLVTGRVWKG+AFGG + RS +P LVD YM 
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMA 329

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  459 bits (1182), Expect = e-163
 Identities = 193/332 (58%), Positives = 242/332 (72%), Gaps = 2/332 (0%)

Query: 10  CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
           CKAAV WE  KPL IE+++VAPP+AGEVRIK++ T +CHTD +   GK P    P ILGH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGH 59

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           E AGIVES+G GVT ++PGD VIP +  +C +CK C + + NLC K RG  G G+M  D 
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DG 118

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
            SRF+  GKPI+HF+GTSTF++YTVV ++S+AKIDP APL+KVCL+GCG  TG GA  NT
Sbjct: 119 TSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNT 178

Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           AKV PGS  AVFGLG VGL+V  G KAAGASR+I +DI+  KF++AK  G TE +NP+D 
Sbjct: 179 AKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238

Query: 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
           DKPI +VL ++TDGGVDY+FE IG+   ++ AL+    G GTSV+VGV  SG E +  P 
Sbjct: 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPN 298

Query: 310 QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            L+TGR  KGT FGG+KS+  VP LV  Y +K
Sbjct: 299 DLLTGRTIKGTVFGGWKSKDSVPKLVALYRQK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  459 bits (1182), Expect = e-163
 Identities = 190/345 (55%), Positives = 253/345 (73%), Gaps = 3/345 (0%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DP 59
             T+G+VITCKAAVAW P +PLV+E+++V PPQ  EVRIKIL+T++CHTD   W G+ + 
Sbjct: 2   SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA 61

Query: 60  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
           +  +P ILGHEAAGIVESVGEGV +++ GDHVIP +  EC +C++CK  KTNLC   R  
Sbjct: 62  QRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVD 121

Query: 120 TGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177
               VM+ND K+RFS   +G+PIYHF+ TSTF++YTV+    V KIDP APL K+ LL C
Sbjct: 122 PFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSC 181

Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
           GV TG+GA WNTA V+ GS VA+FGLG VGLAVAEGA+A GAS++IG+DI+P+KF++ K 
Sbjct: 182 GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241

Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            G+T+F+NPKD DKP+ + + ++T GGVDYSFEC GNV V+R A    H GWG +V++G+
Sbjct: 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGI 301

Query: 298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342
             + + +   P +L  GR   G+ FG FK +SQ+P L  + M+ V
Sbjct: 302 HPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGV 346

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  413 bits (1064), Expect = e-145
 Identities = 181/337 (53%), Positives = 240/337 (71%), Gaps = 4/337 (1%)

Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
            VITC+AAVAW   + LV+E+V+V+PPQ  E+RIK++ T+LC +D   W  +    LFP 
Sbjct: 9   NVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPR 65

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           I GHEA+GIVES+GEGVTE + GDHV+  +  EC  C+ C SGK+N+C +V G    GVM
Sbjct: 66  IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMC-QVLGLERKGVM 124

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
            +D+K+RFSI GKP+YH+   S+FS+YTVVH     K+DP APL K+CLL CGV  GLGA
Sbjct: 125 HSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGA 184

Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
            WN A V  GS V +FGLGTVGL+VA+GAK  GAS++IG+DI+P+K ++AK FGVT+F+N
Sbjct: 185 AWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN 244

Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P D  +PIQQV+  +T GG DYSFEC+G+  +   AL+ C  GWG +V +GV  +  E+S
Sbjct: 245 PNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVS 304

Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKV 342
                 ++GR  KG+ FGG+K +S +P LVDKYM K 
Sbjct: 305 AHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKE 341

Length = 378

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  364 bits (937), Expect = e-126
 Identities = 147/331 (44%), Positives = 202/331 (61%), Gaps = 8/331 (2%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           +AAV  E  KPL IE+V++  P  GEV ++I    LCH+D +  +G  P  L P +LGHE
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPL-PAVLGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
            AG+VE VG GVT V+PGDHV+  +   C  C++C  G+ NLC    GA   G  + D  
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGILGGQLPDGT 118

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
            RF+ +G+P+    G  TF++YTVV + SV KID   PLD+  LLGCGV TG+GAV NTA
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178

Query: 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250
           +V PG  VAV G G VGL   +GA+ AGASR+I +D  P+K + A+ FG T  VN  + D
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD 238

Query: 251 KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
             ++ V  DLTDG G DY+FE +G  + +R AL    KG GT+V+VG+   G+ +S    
Sbjct: 239 -AVEAV-RDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPAL 295

Query: 310 QLV-TGRVWKGTAFGGFKSRSQVPWLVDKYM 339
           +L  + +  +G+ +G    R  +P L+D Y 
Sbjct: 296 ELFLSEKRLQGSLYGSANPRRDIPRLLDLYR 326

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  286 bits (734), Expect = 5e-95
 Identities = 124/333 (37%), Positives = 181/333 (54%), Gaps = 7/333 (2%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +   AAV  EP  P V+EDV++  P+  EV ++I+ T +CHTD     G  P    P +L
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVL 59

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHE AG+VE+VG  VT ++PGDHV+  + A C EC  C SG    C        +G   +
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPD 118

Query: 128 DRKSRFSINGKPIY-HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                   +G P++ HF G S+F+ Y VVH+ +V K+D   PL+ +  LGCG+ TG GAV
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
            N  K  PGS +AVFG G VGLA    AK AG + +I +DI   + + AK  G T  +NP
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238

Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
           K+ D  +   + ++T GGVDY+ +  G  +V+  A++      GT  +VG    G E++ 
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTL 295

Query: 307 RPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKY 338
               L+  G+  +G   G    +  +P L++ Y
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELY 328

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  276 bits (709), Expect = 3e-91
 Identities = 136/322 (42%), Positives = 183/322 (56%), Gaps = 6/322 (1%)

Query: 20  KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG 79
           +PLVIE+V++ PP  GEV +KI    LCH+D    +G  P  L P  LGHEAAG+V  VG
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMALGHEAAGVVVEVG 77

Query: 80  EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
           EGVT+++ GDHV+  +   C  C+ C  G+  LC     A GAG +++  + R  + G  
Sbjct: 78  EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGR-RLRLRGGE 136

Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA 199
           I H +G S F++Y VV   SV KID   PL+   L GC V TG+GAV NTA V PG  VA
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196

Query: 200 VFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259
           V GLG VGL+   GA AAGAS+V+ +D++  K   A+  G T  VN  D +  ++QV  +
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN-AVEQV-RE 254

Query: 260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 318
           LT GGVDY+FE  G+V  +  A E   +G GT+V  G+      +S     LV   R  K
Sbjct: 255 LTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLK 313

Query: 319 GTAFGGFKSRSQVPWLVDKYMK 340
           G+  G    R  +P  +  Y+ 
Sbjct: 314 GSYMGSCVPRRDIPRYLALYLS 335

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  259 bits (664), Expect = 2e-84
 Identities = 129/334 (38%), Positives = 186/334 (55%), Gaps = 12/334 (3%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KAAV W P +P  +E++++  P+AGEV +K++ + LCH+D +  +G  P   +P + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDR 129
            AG+V  VG GVT V+PGDHV+  +   C  C++C +G  NLC    GA    G  ++D 
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCD--LGAALLTGSQISDG 120

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
             RF  +G+ +       TFS+YTVV + SV KID   PLDK CL+GCGVPTG G+  N 
Sbjct: 121 TYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNI 180

Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           A V PG  V V G+G VG+   +GA  AGA +VI +D    K ++A  FG T        
Sbjct: 181 ADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFA--SM 238

Query: 250 DKPIQQVLVDLTDG-GVDYSFECIGNV--SVMRAALECCHKGWGTSVIVGVAASGQE-IS 305
           ++ +Q V  +LT+G G D +   +G V    +  AL    KG G  V+ G+       + 
Sbjct: 239 EEAVQLVR-ELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVK 296

Query: 306 TRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKY 338
              F+L    +  +GT FGG   R+ +P L++ Y
Sbjct: 297 VNLFELTLLQKELQGTLFGGANPRADIPRLLELY 330

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  214 bits (547), Expect = 7e-67
 Identities = 105/330 (31%), Positives = 160/330 (48%), Gaps = 9/330 (2%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KAAV   PN PL IE++ V  P+ GE+ I++    +CH+D +   G+ P    P +LGHE
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHE 60

Query: 71  AAGIVESVGEGVT---EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
            +G V  VG  V     +  GD V+  +   C +C++C  GK NLC            + 
Sbjct: 61  ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120

Query: 128 DRKSR-FSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
           D  +R F ++G P+Y +      ++Y VV   ++A +       +  +LGC   T  GA+
Sbjct: 121 DGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGAL 179

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
            + A V PG  VAV G+G VG +  + AKA GAS +I +D+  +K  +AK  G T  VN 
Sbjct: 180 KHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239

Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
              D  +  +       GVD   E +G     + AL+    G G +V+VG+A  G     
Sbjct: 240 AKED-AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEI 297

Query: 307 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVD 336
              +LV   +    ++G  + R  +P LV 
Sbjct: 298 PITRLVRRGIKIIGSYGA-RPRQDLPELVG 326

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  195 bits (497), Expect = 1e-60
 Identities = 81/290 (27%), Positives = 115/290 (39%), Gaps = 31/290 (10%)

Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 94
           EV +++    LC TD +   G  P     P ILGHE AG+V  VG GVT V+ GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
               C  C+ C+                                 I        F++Y V
Sbjct: 61  PNLGCGTCELCRELCPGGG--------------------------ILGEGLDGGFAEYVV 94

Query: 155 VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGA 214
           V   ++  +     L++  LL   + T   A+     ++PG  V V G G VGL  A+ A
Sbjct: 95  VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154

Query: 215 KAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274
           KAAGA RVI  D   +K + AK  G    ++ K+ D    + L     GG D   + +G 
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGG 211

Query: 275 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324
              +  AL     G G  V+VG  + G  +      L       G+  G 
Sbjct: 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT 260

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  196 bits (500), Expect = 3e-60
 Identities = 97/310 (31%), Positives = 138/310 (44%), Gaps = 33/310 (10%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +T KAAV  +  +PL IE+V V  P  GEV IK+    +CHTD +   G  P    P I 
Sbjct: 2   MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIP 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V  VGEGVT ++ GD V +      C EC++C+SG  NLC   +         
Sbjct: 62  GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITG------ 115

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                 ++ +G           +++Y VV    V KI     L +   L C   T   A+
Sbjct: 116 ------YTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL 159

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              A V+PG  VAV G G +G    + AKA GA  VI I    +K + AK  G    +N 
Sbjct: 160 -KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217

Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
            D    ++ V         D   + +G  ++   +L+   +G GT V+VG+   G     
Sbjct: 218 SD-SDALEAV-----KEIADAIIDTVGPATL-EPSLKALRRG-GTLVLVGLPGGGPIPLL 269

Query: 307 RPFQLVTGRV 316
             F L+   +
Sbjct: 270 PAFLLILKEI 279

Length = 339

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  196 bits (500), Expect = 5e-60
 Identities = 123/336 (36%), Positives = 169/336 (50%), Gaps = 19/336 (5%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCIL 67
           T +  +A     P+ +E + V  P  GEV + I    +CHTD  Y   G + E  FP +L
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDE--FPFLL 58

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHEAAG+VE+VGEGVT+V PGD+V+  ++A C +C+ CK G+   C     AT    + +
Sbjct: 59  GHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD 118

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
                    G  +   +G   F++ T+VH     K+DP A      LLGCGV  GLGA  
Sbjct: 119 ---------GTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAV 169

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
           NT  V+ G  VAV G G VG A   GA  AGAS++I +DID +K + A+ FG T  VN  
Sbjct: 170 NTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229

Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
             D P++ +   LT G G D   + +G     + A        GT V+VGV      +  
Sbjct: 230 GTD-PVEAIR-ALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLEL 286

Query: 307 RPFQLVTGR--VWKGTAFGGFKSRSQVPWLVDKYMK 340
            P   V GR    K + +G        P LVD Y++
Sbjct: 287 -PLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQ 321

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  181 bits (461), Expect = 2e-54
 Identities = 88/306 (28%), Positives = 127/306 (41%), Gaps = 22/306 (7%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-CILGH 69
           KAAV +     + +E+     P  G+V I++  T +C +D + + G +P       ILGH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           E  G V  VG  V   + GD V+      C  C++C++G+ NLC        AG+     
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-- 118

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
                I+G           F++Y  V         P    ++   L   + T        
Sbjct: 119 -----IDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163

Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           A V PG  V V G G +GL     AK  GAS VI +D  P++ + AK  G  + V     
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223

Query: 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
           D    ++L      G D   E +G+   +  ALE    G GT V+VGV   G E    P 
Sbjct: 224 DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGV--YGGEDIPLPA 280

Query: 310 QLVTGR 315
            LV  +
Sbjct: 281 GLVVSK 286

Length = 350

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  181 bits (461), Expect = 3e-54
 Identities = 91/307 (29%), Positives = 134/307 (43%), Gaps = 27/307 (8%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           +AAV  E  +PL I +V    P    V +++    +C +D + W G DP+   P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
            AG+V  VGE V+  + GD V   +   C  C +C++G +N+C                 
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------------- 108

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
                       F    +F++Y  V   DV++ ++           LGC   T   A+ +
Sbjct: 109 ---------QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159

Query: 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
            A+V+PG  VAV G G VGL+    A A GA RVI +DID  K + A+  G    VN  +
Sbjct: 160 QARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE 218

Query: 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP 308
            +     V  DLT GG   S + +G     R ++    K  G  V VG+    +     P
Sbjct: 219 VEDVAAAV-RDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALP 276

Query: 309 FQLVTGR 315
              V  R
Sbjct: 277 MDRVVAR 283

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  175 bits (447), Expect = 4e-52
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 27/313 (8%)

Query: 10  CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
            +AAV   P KPL I +V +   + G V +++    +C +D +T +G+ P    P ILGH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 70  EAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
           E  G V ++G GVT       ++ GD V     A C  C  C  G    C   +      
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK----- 115

Query: 124 VMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
                    +         H  G   ++++  +    ++ ++    P +      C + T
Sbjct: 116 ---------YGHEASCDDPHLSG--GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT 164

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
            L A+     V  G  V V G G +GL     AK AGA RVI ID  P++ + A+ FG  
Sbjct: 165 VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGAD 224

Query: 242 EFVNPKDHDKPIQQVLV-DLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
             ++  +   P ++ +V D+T G G D   E  G+ + +   LE   +G GT V+VG  A
Sbjct: 225 ATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVA 283

Query: 300 SGQEISTRPFQLV 312
               +   P ++V
Sbjct: 284 PAGTVPLDPERIV 296

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  165 bits (419), Expect = 5e-48
 Identities = 94/327 (28%), Positives = 141/327 (43%), Gaps = 51/327 (15%)

Query: 13  AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD--AYTWSG-----KDPEGL--- 62
           A  +   K + +E+V   P + GEV+IK+ +  +C +D   Y   G      +       
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL-DGPIFIPTEGHPHLTG 61

Query: 63  --FPCILGHEAAGIVESVGEGVTEVQPGDHVI--PCYQAECRECKFCKSGKTNLCGKVRG 118
              P  LGHE +G+V  VG GVT  + GD V+  P  +  C  C  CK G  NLC  + G
Sbjct: 62  ETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSL-G 118

Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
             G G             G           F++Y VV    V K+    PL++  L+   
Sbjct: 119 FIGLGGG----------GG----------GFAEYVVVPAYHVHKLPDNVPLEEAALVE-- 156

Query: 179 VPT--GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
            P      AV   +  +PG    V G G +GL      KAAGAS++I  +    + + A+
Sbjct: 157 -PLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAE 214

Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295
             G T  ++P + D  +   +  LT G GVD SF+C G  + +  A++      GT+V V
Sbjct: 215 ELGATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNV 271

Query: 296 GVAASGQEISTRPFQLV-TGRVWKGTA 321
            +    + IS  P  LV   +   G+ 
Sbjct: 272 AIW--EKPISFNPNDLVLKEKTLTGSI 296

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  163 bits (414), Expect = 1e-47
 Identities = 98/311 (31%), Positives = 139/311 (44%), Gaps = 50/311 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA V +E    L +E+V V  P   EV IK+    +C TD + + G+      P + GHE
Sbjct: 2   KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHE 59

Query: 71  AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
            AG+V +VG  VT  + GD V     I C      EC +C+ G+ NLC  +   T  GV 
Sbjct: 60  FAGVVVAVGSKVTGFKVGDRVAVDPNIYCG-----ECFYCRRGRPNLCENL---TAVGVT 111

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTG 182
            N         G           F++Y VV    V KI      ++  L   L C     
Sbjct: 112 RN--------GG-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC----- 147

Query: 183 LGAVW--NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
             AV   +   ++PG  V VFG G +GL +A+  K  GASRV   + + +K + AK  G 
Sbjct: 148 --AVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGA 205

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TE V+P   D   Q+   +    G D   E  G    +  A+E   +G GT ++ GV A 
Sbjct: 206 TETVDPSREDPEAQK---EDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAP 261

Query: 301 GQEISTRPFQL 311
              +S  PF++
Sbjct: 262 DARVSISPFEI 272

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  159 bits (405), Expect = 4e-46
 Identities = 90/288 (31%), Positives = 124/288 (43%), Gaps = 27/288 (9%)

Query: 20  KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESV 78
             LV+E+V V  P  GEV +K+    +CH+D +   G  P     P  LGHE AG V  V
Sbjct: 12  GLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEV 71

Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
           G GVT  + GD V       C  C  C+ G+ NLC            +N       I+G 
Sbjct: 72  GAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQGMPGLGIDG- 118

Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198
                     F++Y VV   ++  +    P  +  +    V T   AV    +V+PG  V
Sbjct: 119 ---------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETV 169

Query: 199 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258
            V GLG +GL   + AKA GA  VI +DI  +K + AK  G  E +N  D D P  +   
Sbjct: 170 LVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD-DSPKDKKAA 227

Query: 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
            L  GG D  F+ +G       A +    G G  V+VG+      +  
Sbjct: 228 GL-GGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL 273

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  159 bits (405), Expect = 4e-46
 Identities = 90/314 (28%), Positives = 138/314 (43%), Gaps = 51/314 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA V   P   L  ED+    P  GEV +K+    +C +D   + G       P +LGHE
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYH-PPLVLGHE 59

Query: 71  AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
            +G VE VG GV ++  GD V     +PC      +C++CK G+ +LC            
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNPLLPCG-----KCEYCKKGEYSLCSN---------- 104

Query: 126 MNDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP-- 180
                          Y ++G+     F++Y  V   ++ KI      ++  ++    P  
Sbjct: 105 ---------------YDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIE---PAA 146

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
             L AV   A +  G  V V G GT+GL   +  K  GA RVI +DID +K   A+  G 
Sbjct: 147 VALHAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGA 205

Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
            + +NPK+ D    + + +LT+G G D   E  G+ + +  AL     G G  V+VG+  
Sbjct: 206 DDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPY 261

Query: 300 SGQEISTRPFQLVT 313
               +S   F+ + 
Sbjct: 262 GDVTLSEEAFEKIL 275

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  158 bits (402), Expect = 1e-45
 Identities = 91/300 (30%), Positives = 132/300 (44%), Gaps = 32/300 (10%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA V   P K  + E          +  +++  T++C +D + + G  P      ILGHE
Sbjct: 2   KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
             G V  VG  V  ++PGD V       C  C+FC+ G    C                 
Sbjct: 62  FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE---------------- 105

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGL-GA 185
                NG   +         Q   V     D+++AKI    P +   +L   +PTG  GA
Sbjct: 106 -----NGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA 160

Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
               A ++PGS VAV G G VGL    GA+  GA+R+I +D +P++ D AK  G T+ +N
Sbjct: 161 E--LAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIIN 218

Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304
           PK+    ++Q+L +LT G GVD   E +G       A++    G GT   VGV      +
Sbjct: 219 PKN-GDIVEQIL-ELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPL 275

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  156 bits (396), Expect = 6e-45
 Identities = 96/304 (31%), Positives = 142/304 (46%), Gaps = 39/304 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA V  +P + L + D+    P AGEV +++    +C +D + + G++P   +P ILGHE
Sbjct: 2   KALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
            +G V  VGEGV  ++ GD V   P     C EC  C+ G+ N C  ++      V+   
Sbjct: 61  LSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCENLQ------VLGVH 112

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VW 187
           R      +G           F++Y VV       +     LD+  L+    P  +GA   
Sbjct: 113 R------DG----------GFAEYIVV-PADALLVPEGLSLDQAALVE---PLAIGAHAV 152

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
             A V  G  V V G G +GL V + AKA GA RVI +DID ++ + A+  G  + +N  
Sbjct: 153 RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211

Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE-CCHKGWGTSVIVGVAASGQEIS 305
           D D  +   L +LTDG G D   +  GN + M  A+E   H   G  V+VG++       
Sbjct: 212 DED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG--GRVVLVGLSKGPVTFP 267

Query: 306 TRPF 309
              F
Sbjct: 268 DPEF 271

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  156 bits (396), Expect = 9e-45
 Identities = 105/333 (31%), Positives = 148/333 (44%), Gaps = 81/333 (24%)

Query: 12  AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLF----PCI 66
           AAV   P   L +E+  +  P  GEV +++    +C +D + +  G+   G F    P +
Sbjct: 1   AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI--GDFVVKEPMV 57

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LGHE+AG V +VG GVT ++ GD V     +PC     R C+FCKSG+ NLC  +R    
Sbjct: 58  LGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPC-----RTCEFCKSGRYNLCPDMR---- 108

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHD----------VSV---AKID 164
                                F  T     T  +Y V H           VS+   A ++
Sbjct: 109 ---------------------FAATPPVDGTLCRY-VNHPADFCHKLPDNVSLEEGALVE 146

Query: 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 224
           P +    V +  C            A V PG  V VFG G +GL  A  AKA GA++V+ 
Sbjct: 147 PLS----VGVHAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVV 192

Query: 225 IDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 282
            DIDP + + AK  G T  VN +  D P   + + +L  G G D   EC G  S ++ A+
Sbjct: 193 TDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAI 252

Query: 283 ECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 315
                G GT V+VG+   G+   T P    + R
Sbjct: 253 YATRPG-GTVVLVGM---GKPEVTLPLSAASLR 281

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  151 bits (385), Expect = 4e-43
 Identities = 88/309 (28%), Positives = 130/309 (42%), Gaps = 50/309 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KAAV   PN  + +E+V V  P  GEV +K+    +C TD     G   +   P ILGHE
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 71  AAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
            AG +  VG+GVT  + GD       +PC      EC +C  G  N+C   +        
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCG-----ECHYCLRGNENMCPNYKKFG----- 110

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-----KIDPQAPLDKVCL---LGC 177
                            + G   F++Y  V   +V      K+      ++  L   L C
Sbjct: 111 ---------------NLYDG--GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLAC 153

Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
            +          A ++PG  V V G G +GL  A  AKA+GA +VI  D++  + + AK 
Sbjct: 154 CI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK 208

Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296
            G    ++  + D  +++V  +LTDG G D      G+      ALE   KG G  +  G
Sbjct: 209 LGADYTIDAAEED-LVEKVR-ELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFG 265

Query: 297 VAASGQEIS 305
               G  ++
Sbjct: 266 GLPKGSTVN 274

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  151 bits (383), Expect = 5e-43
 Identities = 96/303 (31%), Positives = 135/303 (44%), Gaps = 34/303 (11%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KAA+  +PNKPL IE+V    P  GEV IK+    +C+ D   W G  P G +P ILGHE
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
             G VE VGEGV   +PGD VI  Y   C +C++C SG+ NLC                 
Sbjct: 62  IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------------- 108

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
                     Y       F++Y  V + S+ K+      +   L  C V T + A+   A
Sbjct: 109 ---------EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KRA 158

Query: 191 KVEPGSIVAV-FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
            V+ G  V V    G VG+   + AKA GA RVI +   P+K    K  G    ++    
Sbjct: 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSKF 217

Query: 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
            + ++++      GG D   E +G    +  +L   +KG G  V++G          RP 
Sbjct: 218 SEDVKKL------GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIGNVT-PDPAPLRPG 268

Query: 310 QLV 312
            L+
Sbjct: 269 LLI 271

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  147 bits (373), Expect = 2e-41
 Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 28/281 (9%)

Query: 19  NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPEGLFPCILGHEAAGIVES 77
           ++ + + +  V  P  GEV +++  + LC +D + +  G         I GHE AG+V +
Sbjct: 9   DRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVA 68

Query: 78  VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
           VG GVT  + GD V+  +   C  C+ C+ G   LC                      + 
Sbjct: 69  VGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLC---------------------TSK 107

Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
           +  Y +      ++Y +V + ++  +          LL CG+ T   A+     V     
Sbjct: 108 RAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDT 166

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257
           V V G G VGL     A+A GA  VIG+D  P++ + AK  G    +N    D    Q +
Sbjct: 167 VLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEI 223

Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            +LT G G D + EC GN +  R ALE     WG  V+VG 
Sbjct: 224 RELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGE 263

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  140 bits (355), Expect = 8e-39
 Identities = 96/308 (31%), Positives = 140/308 (45%), Gaps = 33/308 (10%)

Query: 10  CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
            KAAV  E   KP  ++DV V  P  GEV +K+  + +CHTD +   G  P +   P I 
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIG 60

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE AG+V +VG GV+ ++ GD V +      C +C++C++G   LC        +G   
Sbjct: 61  GHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN---QKNSG--- 114

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                 ++++G          TF++Y +     V  I      ++   L C   T   A+
Sbjct: 115 ------YTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158

Query: 187 WNTAKVEPGSIVAVFGL-GTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
              A ++PG  V + G  G +G L V   AKA G  RVI ID+  +K + AK  G   FV
Sbjct: 159 -KKAGLKPGDWVVISGAGGGLGHLGVQY-AKAMGL-RVIAIDVGDEKLELAKELGADAFV 215

Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304
           + K  D  ++ V      GG         + +    AL+    G GT V VG+   G  I
Sbjct: 216 DFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGF-I 272

Query: 305 STRPFQLV 312
              PF LV
Sbjct: 273 PLDPFDLV 280

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  138 bits (351), Expect = 2e-38
 Identities = 88/310 (28%), Positives = 124/310 (40%), Gaps = 39/310 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KAAV      PL  E+V V  P  GEV IKI    +CHTD +   G      +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
             G V  VG GV   + GD V +      C  C++C+ G  NLC K    TG        
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN-TG-------- 111

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN- 188
              ++  G           +++Y V        +    PL +   L C   T    V++ 
Sbjct: 112 ---YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT----VYSA 154

Query: 189 --TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              A   PG  VAV G+G +G    + A+A G    + I   P K + A+  G  E V+ 
Sbjct: 155 LRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDS 213

Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
                   ++      GG D     + + +   AAL    +G G  V+VG+  S    S 
Sbjct: 214 G------AELDEQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPF-SP 265

Query: 307 RPFQLVTGRV 316
             F L+  R 
Sbjct: 266 DIFPLIMKRQ 275

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  137 bits (347), Expect = 3e-37
 Identities = 91/314 (28%), Positives = 135/314 (42%), Gaps = 38/314 (12%)

Query: 13  AVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
           A+ W     + +E+V    P      +  +++  TA+C +D + + G  P      ILGH
Sbjct: 3   ALVWHGKGDVRVEEV--PDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGH 60

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           E  G+VE VG  V  ++ GD V+  +   C EC +CK G  + C     +     +    
Sbjct: 61  EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA 120

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
            +   I G    H  G     Q   V     DV   KI      +K   L   +PTG  A
Sbjct: 121 GA--GIFGYS--HLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHA 176

Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
               A+V+PG  VAV+G G VGL  A  AK  GA RVI ID  P++ + A++    E +N
Sbjct: 177 A-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235

Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIG---------------------NVSVMRAALE 283
            ++ D  + + L +LT G G D   + +G                         +R A++
Sbjct: 236 FEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQ 294

Query: 284 CCHKGWGTSVIVGV 297
              KG GT  I+GV
Sbjct: 295 AVRKG-GTVSIIGV 307

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  133 bits (337), Expect = 3e-36
 Identities = 86/298 (28%), Positives = 130/298 (43%), Gaps = 35/298 (11%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 67
           KAA  +E  KPL +EDV V  P  G+V +++    +CH+D +   G     L    P  L
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE AG VE VG GV  ++ GD V+  +    C  C++C+ G+ N C             
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVV-VHPPWGCGTCRYCRRGEENYC------------E 108

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
           N R      +G           F++Y +V    + K+       +   L     T   AV
Sbjct: 109 NARFPGIGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158

Query: 187 WNTAKV-EPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
                  +PGS V V G+G +G +AV +  +A   + VI +D   +    A+  G    +
Sbjct: 159 KKALPYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGADHVL 217

Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           N    D  +++V  +LT G G D   + +G+   +  A +   KG G  VIVG    G
Sbjct: 218 NAS--DDVVEEVR-ELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHG 271

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  130 bits (329), Expect = 4e-35
 Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 42/285 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYT-WSGK--DPEGLFPCIL 67
           KA       K   IE   +      +  ++    A C +D +T W G   +  G+   IL
Sbjct: 2   KAFAMLGIGKVGWIE-KPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGM---IL 57

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVI-----PCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           GHEA G+VE VG  V + +PGD VI     P ++         + G  +  G        
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWR-----SVAAQRGYPSQSG-------- 104

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGCGVP 180
             M+   K     +G           F++Y  V+D   ++A +      ++  +L   + 
Sbjct: 105 -GMLGGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TG       A ++ G  VAVFG+G VGL    GA+  GA R+I +   P + + AK +G 
Sbjct: 154 TGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGA 212

Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
           T+ V+ K+ D  ++Q+L  LT G GVD      G       AL+ 
Sbjct: 213 TDIVDYKNGD-VVEQIL-KLTGGKGVDAVIIAGGGQDTFEQALKV 255

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  130 bits (328), Expect = 5e-35
 Identities = 81/295 (27%), Positives = 124/295 (42%), Gaps = 39/295 (13%)

Query: 19  NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVES 77
            + L   D+    P   EV +++   AL H D +   G     L  P ILG + AG+VE+
Sbjct: 12  PEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEA 71

Query: 78  VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
           VG GVT V+PG  V+      C  C++C +G+ NLC                 +++ I G
Sbjct: 72  VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLC-----------------AQYGILG 114

Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT----AKVE 193
               H  G   +++Y  V   ++  I      ++        P      W+     A++ 
Sbjct: 115 ---EHVDG--GYAEYVAVPARNLLPIPDNLSFEE----AAAAPLTFLTAWHMLVTRARLR 165

Query: 194 PGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
           PG  V V G G+ VG A  + AK  GA  VI       K +RAK  G    ++ +  D  
Sbjct: 166 PGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKEDFV 224

Query: 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
             + + +LT   GVD   E +G  +    +L+   +G G  V  G A +G E   
Sbjct: 225 --REVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCG-ATTGYEAPI 274

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  129 bits (327), Expect = 1e-34
 Identities = 84/299 (28%), Positives = 118/299 (39%), Gaps = 37/299 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG------------KD 58
           KAA   EP KPL   ++    P   EV +K+    +CH+D + W G             D
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 59  PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
                P +LGHE  G V +VG    +V+ GD V+      C EC  C +G  NLC K R 
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGR- 120

Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
           A G                  I+   G   +++Y +V                   L C 
Sbjct: 121 ALG------------------IFQDGG---YAEYVIVPHSRYLVDPGGLDPALAATLACS 159

Query: 179 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
             T   AV     +     V + G G +GL      KA G + +I +DID  K + AK  
Sbjct: 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219

Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
           G    VN  D D   +  ++    GGVD   + + N +    A +   KG G  V+VG+
Sbjct: 220 GADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGL 275

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  126 bits (318), Expect = 2e-33
 Identities = 90/271 (33%), Positives = 125/271 (46%), Gaps = 36/271 (13%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQ---AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           KA V   P K   I       P      +  +K+L T +C TD +   G  P      IL
Sbjct: 2   KALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRIL 58

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G+VE VG  VT  + GD V I C  + C  C +C+ G  + C      +G  ++ 
Sbjct: 59  GHEGVGVVEEVGSAVTNFKVGDRVLISCISS-CGTCGYCRKGLYSHC-----ESGGWILG 112

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYT-VVH-DVSVAKIDPQAPLDKVCLLGCGVPTGL- 183
           N       I+G          T ++Y  + H D S+ K+      +   +L   +PTG  
Sbjct: 113 NL------IDG----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156

Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
             V N  KV+PG  VA+ G G VGLA    A+    S++I +D+D  + + AK  G T  
Sbjct: 157 CGVLN-GKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHT 215

Query: 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
           VN    D  I+QVL +LTDG GVD   E +G
Sbjct: 216 VNSAKGD-AIEQVL-ELTDGRGVDVVIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  125 bits (317), Expect = 3e-33
 Identities = 96/301 (31%), Positives = 132/301 (43%), Gaps = 53/301 (17%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDA--YTW-----SGKDPEGLF 63
           KA V  +      + +V V  P  GEV IK+L  ++C TD   Y W     S   P    
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP---- 57

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 119
           P I GHE AG V  VGEGVT V+ GD+V     AE    C +C  C++G  ++C   +  
Sbjct: 58  PLIFGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTK-- 111

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 176
              GV   D       +G           F++Y VV + ++ K D   P +   +   LG
Sbjct: 112 -ILGV---DT------DG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLG 151

Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
             V T L        V  G  V + G G +GL     AKAAGAS VI  D +P + + AK
Sbjct: 152 NAVHTVL-----AGDV-SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205

Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296
             G    +NP++ D  + +V       GVD   E  GN   +   L+    G G   I+G
Sbjct: 206 KMGADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILG 262

Query: 297 V 297
           +
Sbjct: 263 L 263

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  124 bits (313), Expect = 9e-33
 Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 28/294 (9%)

Query: 13  AVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEA 71
           AV ++    + +E+V +       +  +K+   A+C +D + + G  P      +LGHE 
Sbjct: 3   AVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGHEF 61

Query: 72  AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKS 131
            G V  VG  V  ++ GD V+  +   C EC +C+ G++  C K      AG        
Sbjct: 62  VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAG-------- 113

Query: 132 RFSINGKPIYHFMGTSTFSQYTVV--HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
             +++G            ++Y  V   D ++ K+      +   LLG  +PTG       
Sbjct: 114 SPNLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR- 162

Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           A+V PG  VAV G G VGL     A+  GA+RV  +D  P++ +RA   G  E +N +D 
Sbjct: 163 AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFED- 220

Query: 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            +P+++V  + T+G G D   E +G  + +  A +      G    VGV  + +
Sbjct: 221 AEPVERVR-EATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTAEE 272

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  122 bits (310), Expect = 2e-32
 Identities = 86/317 (27%), Positives = 126/317 (39%), Gaps = 47/317 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           K   A + +  L     +  P    +V IKI +  +CH+D +T   +     +P + GHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
             GIV +VG  VT+ + GD V + C    C  C+ CKSG+   C K              
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY--------- 111

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VWN 188
                 NGK     +    ++ + VV +  V KI           L C      G  V++
Sbjct: 112 ------NGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYS 160

Query: 189 ---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
                 V PG  V V G+G +G LAV + AKA GA  V      P K + A   G  EF+
Sbjct: 161 PLKRNGVGPGKRVGVVGIGGLGHLAV-KFAKALGA-EVTAFSRSPSKKEDALKLGADEFI 218

Query: 245 NPKDHD--KPIQQ---VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
             KD +  K       +++D      D        +S+++          GT V+VG   
Sbjct: 219 ATKDPEAMKKAAGSLDLIIDTVSASHDLDPY----LSLLKPG--------GTLVLVGAPE 266

Query: 300 SGQEISTRPFQLVTGRV 316
               +   PF L+ GR 
Sbjct: 267 EPLPVP--PFPLIFGRK 281

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  117 bits (294), Expect = 2e-30
 Identities = 83/281 (29%), Positives = 118/281 (41%), Gaps = 44/281 (15%)

Query: 26  DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85
           +V    P  GEV IK+    +C +D + + G       P +LGHE +G +  VG  V   
Sbjct: 18  EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGW 77

Query: 86  QPGDHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144
           + GD V+       C  C +C+ G  NLC   R   G              +G       
Sbjct: 78  KVGDRVVSETTFSTCGRCPYCRRGDYNLCPH-RKGIGTQA-----------DG------- 118

Query: 145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVF 201
               F++Y +V + S+ ++     L+   L   L   V     AV   + + PG  V VF
Sbjct: 119 ---GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAV----HAVAERSGIRPGDTVVVF 171

Query: 202 GLGTVGLAVAEGAKAAGASRVI-GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD- 259
           G G +GL  A+ AK  GA+ V+ G + D  + D AK  G        D     ++ L + 
Sbjct: 172 GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGA-------DAVNGGEEDLAEL 224

Query: 260 ---LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296
              +TDG G D   EC G V  +  ALE   KG G  V VG
Sbjct: 225 VNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 8e-30
 Identities = 66/222 (29%), Positives = 94/222 (42%), Gaps = 25/222 (11%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA +     +   IE+V    P   EV IK+ +  LC+ D     G  P   +P ILGHE
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
             G VE VGE V   +PGD V     A    C++C+SG+   C                K
Sbjct: 62  VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC----------------K 105

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
           +R    G+ +  F     F++Y  V   S+ K+ P    +   ++ C        +   A
Sbjct: 106 NRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRA 158

Query: 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231
            V+ G  V V G  G VG+   + AKA GA +VI +     K
Sbjct: 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESK 199

Length = 334

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  112 bits (283), Expect = 1e-28
 Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 70/323 (21%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF-------PCILGHEAAGI 74
           L +E+     P  GEVR+++    +C +D + +      G F       P +LGHE +G+
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ----HGGFGTVRLREPMVLGHEVSGV 64

Query: 75  VESVGEGVTEVQPGDHVI-----PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           VE+VG GVT + PG  V      PC       C +C++G+ NLC  +R            
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGT-----CDYCRAGRPNLCLNMR------------ 107

Query: 130 KSRFSINGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP- 180
                        F+G++         F +Y VV       +     L          P 
Sbjct: 108 -------------FLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLR---RAALAEPL 151

Query: 181 -TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
              L AV N A    G  V V G G +G  V   A+ AGA+ ++  D+       A+  G
Sbjct: 152 AVALHAV-NRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMG 210

Query: 240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
             E VN                 G  D  FE  G  + + +AL     G GT V VG+  
Sbjct: 211 ADETVNLARDPLAAYAAD----KGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG 265

Query: 300 SGQEISTRPFQLVTGR--VWKGT 320
               +   P   +  +    +G+
Sbjct: 266 GPVPL---PLNALVAKELDLRGS 285

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  112 bits (281), Expect = 3e-28
 Identities = 88/308 (28%), Positives = 128/308 (41%), Gaps = 37/308 (12%)

Query: 11  KAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
           +A V   P    V  + D  +  P   +  I+++ T +C +D + + G  P    P  +G
Sbjct: 2   RATVIHGPGDIRVEEVPDPVIEEP--TDAVIRVVATCVCGSDLWPYRGVSPTR-APAPIG 58

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           HE  G+VE VG  VT V+PGD VI  +      C FC++G T  C               
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC--------------- 103

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCL-----LGCGVPTG 182
                 ++G     F+         V   D ++ K+      D+  L     L   + TG
Sbjct: 104 ------VHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTG 157

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
             A   +A V PGS V V G G VGL     AK  GA R+I +     +   A+ FG T+
Sbjct: 158 HHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATD 216

Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
            V  +  ++ + +V  +LT G G D   EC+G    M  A+     G G    VGV   G
Sbjct: 217 IVAERG-EEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG 273

Query: 302 QEISTRPF 309
            E+  R  
Sbjct: 274 VELDVREL 281

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  110 bits (276), Expect = 1e-27
 Identities = 79/338 (23%), Positives = 125/338 (36%), Gaps = 60/338 (17%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCIL 67
           KA V  E   P  L + +V    P  GEV +++    +   D     G   P    P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           G EAAG+V +VG GVT  + GD V                          G  G      
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAALGG--------------------VGRDGG----- 96

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
                                +++Y VV    +  +      ++   L     T   A++
Sbjct: 97  ---------------------YAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135

Query: 188 NTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
           + A ++PG  V V G  G VG A  + AKA GA  V+ +    +K +  K  G    +N 
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194

Query: 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           ++ D    + + +LT G GVD   + +G      A+L     G G  V +G  + G  + 
Sbjct: 195 REED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVP 250

Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVN 343
                L+  R+   T  G     S+ P  + + + ++ 
Sbjct: 251 LNLLPLLGKRL---TLRGVT-LGSRDPEALAEALAELF 284

Length = 326

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  110 bits (278), Expect = 1e-27
 Identities = 81/245 (33%), Positives = 115/245 (46%), Gaps = 32/245 (13%)

Query: 39  IKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQ 96
           ++I  TA+C +D + + G+     GL   +LGHEA G VE VG  V  ++ GD V+  + 
Sbjct: 30  VRITTTAICGSDLHMYRGRTGAEPGL---VLGHEAMGEVEEVGSAVESLKVGDRVVVPFN 86

Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTV 154
             C  C+ CK G T +C  V      G                 Y  MG     Q  Y  
Sbjct: 87  VACGRCRNCKRGLTGVCLTVNPGRAGGAYG--------------YVDMGPYGGGQAEYLR 132

Query: 155 V--HDVSVAKIDPQAP----LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 208
           V   D ++ K+  +       D + L     PTG   +   A V+PG  VAVFG G VGL
Sbjct: 133 VPYADFNLLKLPDRDGAKEKDDYLMLSDI-FPTGWHGL-ELAGVQPGDTVAVFGAGPVGL 190

Query: 209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268
             A  A   GASRV  +D  P++ D A++ G    ++  D D P++Q+L  L  GGVD +
Sbjct: 191 MAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD-PVEQIL-GLEPGGVDRA 247

Query: 269 FECIG 273
            +C+G
Sbjct: 248 VDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  100 bits (252), Expect = 2e-26
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 28/133 (21%)

Query: 34  AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIP 93
            GEV +++    +C +D + + G+ P    P ILGHE AGIVE VG GVT ++ GD V+ 
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 94  CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTS---TFS 150
                C +C  C+ G+ NLC                         P   F+G      F+
Sbjct: 61  YPLIPCGKCAACREGRENLC-------------------------PNGKFLGVHLDGGFA 95

Query: 151 QYTVVHDVSVAKI 163
           +Y VV   ++  +
Sbjct: 96  EYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  106 bits (268), Expect = 2e-26
 Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 40/310 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA    EP  PL + +  V  P  GEV IK+    +CH+DA+   G  P   +P + GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVMMN 127
             G +++VGEGV+  + GD V +  +   C  C  C+ G    C  GKV G T  G    
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDG---- 117

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAV 186
                                +++Y +    ++A+I D     +   LL  GV T   A+
Sbjct: 118 --------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGV-TTFNAL 156

Query: 187 WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
            N+   +PG +VAV G+G +G LAV + A   G  R + I     K D A+  G   +++
Sbjct: 157 RNS-GAKPGDLVAVQGIGGLGHLAV-QYAAKMGF-RTVAISRGSDKADLARKLGAHHYID 213

Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
               D    + L +L  GG         N   + A +       G  +I+G  A+G+ ++
Sbjct: 214 TSKEDVA--EALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILG--AAGEPVA 266

Query: 306 TRPFQLVTGR 315
             P QL+ GR
Sbjct: 267 VSPLQLIMGR 276

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  106 bits (267), Expect = 2e-26
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 33/221 (14%)

Query: 11  KAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
           KA V  +P      PL + +V V  P  GEV IK+    +C TD +   G  P    P I
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
            GHE  G VE+VG GVT    GD V +P   + C EC++C+SG+ NLC   R  TG    
Sbjct: 62  PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNAR-FTG---- 116

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
                  ++++G           +++Y V  +     I      ++   L C    G  A
Sbjct: 117 -------YTVDGG----------YAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159

Query: 186 VWNTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASR 221
           +   A ++PG  + ++G G        +A  +GA+    +R
Sbjct: 160 L-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  104 bits (263), Expect = 1e-25
 Identities = 82/293 (27%), Positives = 122/293 (41%), Gaps = 53/293 (18%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-------PEGLF 63
           KA V  +    L + DV V  P   +V IK+  TA+C TD + ++  +            
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV---- 57

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 119
           P ++GHE  G V  VG  VT  + GD V      E    C  C+ C++G+ +LC   R  
Sbjct: 58  PMVVGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC---RNT 110

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 176
            G GV   +R       G           F++Y V+   +V KI    P D   +    G
Sbjct: 111 KGVGV---NR------PG----------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFG 151

Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
             V T L   ++      G  V + G G +G+  A  AK  GA  V+  D++  + + A+
Sbjct: 152 NAVHTALS--FDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205

Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
             G T  VN    D  ++ V+ +L    G D   E  G  S  R  L+  + G
Sbjct: 206 KMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG 256

Length = 341

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 98.5 bits (246), Expect = 3e-25
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 5/133 (3%)

Query: 206 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 264
           VGLA  + AKA GA+RVI +D   +K + AK  G    +N +D D    + + +LT G G
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGRG 59

Query: 265 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324
           VD   +C+G  + +  ALE    G G  V+VG+             L+      G+  GG
Sbjct: 60  VDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGG 118

Query: 325 -FKSRSQVPWLVD 336
             +    +  L  
Sbjct: 119 REEFEEALELLAS 131

Length = 131

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 98.8 bits (246), Expect = 2e-23
 Identities = 83/273 (30%), Positives = 117/273 (42%), Gaps = 37/273 (13%)

Query: 23  VIEDVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGL-FPCILGHEAAGIVESVG 79
            + +V V  P  GEV IK+L T++C TD   Y W       +  P ++GHE AG V  +G
Sbjct: 12  ELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIG 71

Query: 80  EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
            GV  ++ GD+V       C +C  C+ G+ ++C   +     GV   D           
Sbjct: 72  PGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC---QNTKIFGV---DT---------- 115

Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGS 196
                    F++Y VV   ++ K     P +   +   LG  V T L      A    G 
Sbjct: 116 ------DGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL------AGPISGK 163

Query: 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 256
            V V G G +GL     AKA+GA  VI  D +  + + AK  G T  VNP   D  + + 
Sbjct: 164 SVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKE 221

Query: 257 LVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
           + DLTDG GVD   E  G    +   L+    G
Sbjct: 222 VADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG 254

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 98.2 bits (245), Expect = 3e-23
 Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 45/266 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 68
           KAAV  + +   V+ +  + P + GE  +K+ +  +CHTD +  +G   D  G    ILG
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG---RILG 58

Query: 69  HEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           HE  GIV+ VG GVT ++ GD V I  +   C  C++C +G+  LC  V+ A        
Sbjct: 59  HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG------- 111

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA---KIDPQAPLDKVCLLGCGVPTGLG 184
                ++++G      M      Q  V  D +V     +DP       C    GV T   
Sbjct: 112 -----YTVDGG-----MAE----QCIVTADYAVKVPEGLDPAQASSITC---AGVTT-YK 153

Query: 185 AVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
           A+   + ++PG  +A++G G +G LA+        A +VI +DI+  K   AK  G    
Sbjct: 154 AI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLT 211

Query: 244 VNPK---DHDKPIQQVLVDLTDGGVD 266
           +N K   D  K IQ+       GG  
Sbjct: 212 INSKRVEDVAKIIQE-----KTGGAH 232

Length = 338

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 94.6 bits (236), Expect = 2e-22
 Identities = 61/248 (24%), Positives = 85/248 (34%), Gaps = 63/248 (25%)

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
             P   G+ + G V  VG GVT  +PGD V            FC                
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRV------------FC---------------- 50

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
                                  G    ++  VV    +  +    P ++  L      T
Sbjct: 51  ----------------------FGPH--AERVVVPANLLVPLPDGLPPERAALTALA-AT 85

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
            L  V + A+   G  VAV GLG VGL  A+ AKAAGA  V+G+D D  + + A+  G  
Sbjct: 86  ALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA 144

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           + V     D        ++   G D   E  G+ S +  AL       G  V+VG     
Sbjct: 145 DPVAADTAD--------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK 195

Query: 302 QEISTRPF 309
             +    F
Sbjct: 196 PLLLGEEF 203

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 94.6 bits (236), Expect = 5e-22
 Identities = 72/287 (25%), Positives = 96/287 (33%), Gaps = 60/287 (20%)

Query: 11  KAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
           KAAV   P    LV+ DV V  P   EV +K+   AL   D            +P ILG 
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI-PSYPAILGC 60

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           + AG V  VG GVT  + GD V                             G     N  
Sbjct: 61  DFAGTVVEVGSGVTRFKVGDRVA----------------------------GFVHGGNPN 92

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT-------- 181
             R                F +Y V      AKI      ++   L  G+ T        
Sbjct: 93  DPR-------------NGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQK 139

Query: 182 -GLGAVW-NTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
            GL       +    G  V ++G  + VG    + AK AG  +VI     PK FD  K+ 
Sbjct: 140 LGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLVKSL 197

Query: 239 GVTEFVNPKD-HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
           G        D HD  + + +   T G + Y+ +CI      +   E 
Sbjct: 198 GADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 94.9 bits (236), Expect = 5e-22
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 42/234 (17%)

Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV---- 91
           +V +K+  + LC +D            +P  LGHE +G VE+VG GV ++ PGD V    
Sbjct: 27  DVLVKVASSGLCGSDIPRIFKNGAH-YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85

Query: 92  -IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF- 149
            +PC+      C  C  G  +LC K                         Y F+G+    
Sbjct: 86  LLPCFT-----CPECLRGFYSLCAK-------------------------YDFIGSRRDG 115

Query: 150 --SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVG 207
             ++Y VV   ++  +    P++    +   +  GL A ++ A+   G  V + G GT+G
Sbjct: 116 GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIG 173

Query: 208 LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDL 260
           L   + A A GA  V  IDI+ +K   AK+ G  +  N ++   P IQ VL +L
Sbjct: 174 LLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227

Length = 347

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 93.2 bits (232), Expect = 1e-21
 Identities = 72/305 (23%), Positives = 108/305 (35%), Gaps = 71/305 (23%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESV 78
             +E+     P  G+V +++    +C +D   ++ G+        P   GHE  G V ++
Sbjct: 7   FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVAL 66

Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
           G GV  +  GD V                                               
Sbjct: 67  GPGVRGLAVGDRVA---------------------------------------------- 80

Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPG 195
                +    F++Y +        + P     +      LGC +      V+    +  G
Sbjct: 81  ----GLSGGAFAEYDLADADHAVPL-PSLLDGQAFPGEPLGCAL-----NVFRRGWIRAG 130

Query: 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
             VAV G G +GL   + A AAGA RVI ID  P +   A+  G TE V   D +  +++
Sbjct: 131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVV-TDDSEAIVER 189

Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTG 314
           V  +LT G G D   E +G+   +  A E   +  G  VI G    G     RP    T 
Sbjct: 190 V-RELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDG----PRPVPFQTW 243

Query: 315 RVWKG 319
             WKG
Sbjct: 244 N-WKG 247

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 93.7 bits (233), Expect = 2e-21
 Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 40/321 (12%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL--------FPCILGHEAAG 73
           L +EDV V   +  E+ I++    +C +D + +   D +G         FP ++GHE +G
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYE-TDKDGYILYPGLTEFPVVIGHEFSG 97

Query: 74  IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 133
           +VE  G+ V   + GD V       C  C+ C+SG  N C             N ++  F
Sbjct: 98  VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC------------KNLKELGF 145

Query: 134 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL---DKVCLLGCGV-PTGL---GAV 186
           S +G           F++Y  V+     +I+    +   DK    G  V PT +   G  
Sbjct: 146 SADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF 195

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
                  PG+ V V+G G +GLA    AKAAGAS+VI  +I  ++ + AK  G     NP
Sbjct: 196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255

Query: 247 -KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304
            K  D    + ++++T G G D   E  G        +E      G  V +G AA+   +
Sbjct: 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPL 315

Query: 305 STRPFQLVTGRVWKGTAFGGF 325
                Q+   ++       G 
Sbjct: 316 HLEVLQVRRAQIVGAQGHSGH 336

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 91.5 bits (227), Expect = 8e-21
 Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 20/233 (8%)

Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCILGHEAAGIV 75
           EP KP+V   V++    AG+V +K+    +CHTD +Y + G       P  LGHE +G V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 76  ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 135
              G G      G  VI      C EC+ CK+G+  +C   R     G   ND +  F+ 
Sbjct: 66  IQAGAG-AASWIGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPG---NDMQGGFA- 117

Query: 136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG 195
                 H +  +      VV +  +A      PL+ V ++   V T   A    A ++ G
Sbjct: 118 -----SHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPYQAAVQ-AGLKKG 167

Query: 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
            +V V G G VG  + + AKA GA+ V+ IDIDP+K +  K FG    +NPKD
Sbjct: 168 DLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKD 219

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 88.8 bits (221), Expect = 5e-20
 Identities = 62/281 (22%), Positives = 93/281 (33%), Gaps = 67/281 (23%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQA--GEVRIKILFTALCHTDAYTWSG---KDPEGLFPC 65
           KA    E   P V+E   V  P+   GEV +K+    +   D     G          P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           I GH+ AG+V +VG GVT  + GD V                                  
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------------------- 88

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 181
                      G   +   G   +++Y VV    +A        +        +P    T
Sbjct: 89  -----------GMTPFTRGG--AYAEYVVVPADELALKPANLSFE----EAAALPLAGLT 131

Query: 182 GLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
              A++    ++ G  V + G  G VG    + AKA GA RVI         D  ++ G 
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIAT-ASAANADFLRSLGA 189

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAA 281
            E ++    D            GGVD   + +G  ++ R+ 
Sbjct: 190 DEVIDYTKGD-----FERAAAPGGVDAVLDTVGGETLARSL 225

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 88.4 bits (220), Expect = 9e-20
 Identities = 81/315 (25%), Positives = 127/315 (40%), Gaps = 45/315 (14%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 77
           L + +  V  P  GEV +++   +L + D       +     + L P     + AG V +
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPL---SDGAGEVVA 71

Query: 78  VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
           VGEGVT  + GD V+P +                L G       A  +         I+G
Sbjct: 72  VGEGVTRFKVGDRVVPTFFP------------NWLDGPPTAEDEASAL------GGPIDG 113

Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
                       ++Y V+ +  + +       ++   L C   T   A++    ++PG  
Sbjct: 114 ----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDT 163

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257
           V V G G V L   + AKAAGA RVI      +K +RAK  G    +N +      ++VL
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVL 222

Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR- 315
             LT G GVD+  E +G    +  +++    G G   ++G   SG E       L+T   
Sbjct: 223 -KLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGF-LSGFEAPVLLLPLLTKGA 278

Query: 316 VWKGTAFGGFKSRSQ 330
             +G A G   SR+Q
Sbjct: 279 TLRGIAVG---SRAQ 290

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 86.0 bits (214), Expect = 5e-19
 Identities = 81/294 (27%), Positives = 118/294 (40%), Gaps = 59/294 (20%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
           KA V  E   P  LV+E+V   P   GEVRI++    +   D     GK       P + 
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           G E AG+VE+VGEGVT  + GD V+                           TG G    
Sbjct: 62  GSEVAGVVEAVGEGVTGFKVGDRVV-------------------------ALTGQG---- 92

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
                                F++  VV   +V  +      ++   L     T   A+ 
Sbjct: 93  --------------------GFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALV 132

Query: 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
             A+++PG  V V G  G VGLA  + AKA GA RVI      +K   A+  G    ++ 
Sbjct: 133 RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191

Query: 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
              D  +++ +  LT G GVD  ++ +G   V  A+L     G G  +++G A+
Sbjct: 192 --RDPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFAS 241

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 86.0 bits (213), Expect = 7e-19
 Identities = 79/294 (26%), Positives = 119/294 (40%), Gaps = 48/294 (16%)

Query: 20  KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVE 76
             L I+  ++ P    +VR+++    +C +D +   T    D     P ++GHE AGI+E
Sbjct: 27  NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIE 86

Query: 77  SVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN 136
            VG  V  +  GD V       C  C  CK G+ NLC                       
Sbjct: 87  EVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC----------------------- 123

Query: 137 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--------LGCGVPTGLGAVWN 188
             P   F  T           V  A +  + P + V L        L  GV         
Sbjct: 124 --PEMKFFATPPVHGSLANQVVHPADLCFKLP-ENVSLEEGAMCEPLSVGVHA-----CR 175

Query: 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV---- 244
            A + P + V V G G +GL     A+A GA R++ +D+D ++   AK  G  E V    
Sbjct: 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST 235

Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298
           N +D +  ++++   +  GG+D SF+C+G    M  ALE    G G   +VG+ 
Sbjct: 236 NIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMG 287

Length = 364

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 84.5 bits (209), Expect = 3e-18
 Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 25/245 (10%)

Query: 37  VRIKILFTALCHTDAYTWSGKD--PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 94
           V +K++ T +C +D +   G+   P GL   +LGHE  G V   G  V  ++ GD V   
Sbjct: 36  VILKVVTTNICGSDQHMVRGRTTAPTGL---VLGHEITGEVIEKGRDVEFIKIGDIVSVP 92

Query: 95  YQAECRECKFCKSGKTNLCGKVR----GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150
           +   C  C+ CK G T +C  V     GA    V M        + G+  Y  +  + F+
Sbjct: 93  FNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGW-----VGGQSEYVMVPYADFN 147

Query: 151 QYTVV-HDVSVAKIDPQAPLDKVCLLGCGVPTGL-GAVWNTAKVEPGSIVAVFGLGTVGL 208
                  D ++ KI      D   L     PTG  GAV  TA V PGS V + G G VGL
Sbjct: 148 LLKFPDRDQALEKI-----RDLTMLSDI-FPTGYHGAV--TAGVGPGSTVYIAGAGPVGL 199

Query: 209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268
           A A  A+  GA+ VI  D++P +  +A++FG  E V+        +Q+   L +  VD +
Sbjct: 200 AAAASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCA 258

Query: 269 FECIG 273
            +C+G
Sbjct: 259 VDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 83.6 bits (207), Expect = 4e-18
 Identities = 68/252 (26%), Positives = 107/252 (42%), Gaps = 36/252 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           K+ V  +PN  L IE+  +  P AGEVR+K+    +C +D++ + G +P   +P ++GHE
Sbjct: 2   KSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
             G++++VGEGV   + G+ V       C  C  C  GK N+C                 
Sbjct: 61  FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVC----------------- 103

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV---PTGLGA-V 186
           +   + G    H  G   FS+Y VV   +  +I P A  D+       V   P  + A V
Sbjct: 104 TSLVVLG---VHRDG--GFSEYAVVPAKNAHRI-PDAIADQ-----YAVMVEPFTIAANV 152

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 245
                     +  ++G G VGL + +  K       VI  D   ++   AK  G    +N
Sbjct: 153 TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVIN 212

Query: 246 PKDHDKPIQQVL 257
                 P+ + L
Sbjct: 213 NAQE--PLGEAL 222

Length = 339

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 27/254 (10%)

Query: 66  ILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
           +LGHE  G V ++  G T       ++ G  V+      C  C  C+ G    C  +R  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCG 178
                                     +  ++++       ++  +    P       GC 
Sbjct: 61  GHE---------ALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 179 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
             T + A+     ++ G  V V G G +GL  A  A AAGA+RV+  D  P + + A +F
Sbjct: 106 TATVMAALEAAGDLK-GRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298
           G T    P   +   ++        GVD + E  G  + +RA LE    G GT+V+ G  
Sbjct: 165 GATALAEP---EVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220

Query: 299 ASGQEISTRPFQLV 312
             G  ++  P Q+V
Sbjct: 221 FPGGPVALDPEQVV 234

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 80.5 bits (199), Expect = 5e-17
 Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 54/284 (19%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---------KDPEG 61
           +A V   P +   +E+V V  P  GE+ +K+    +C  D   + G         + P  
Sbjct: 2   RAVVCHGP-QDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 62  LFPCILGHEAAGIVESVGEGVTE--VQPGDHVIPCYQAECRECKFCKSG------KTNLC 113
             P I GHE  G V  +GEG  E  V+ GD VI      C  C+FC  G      K +L 
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120

Query: 114 GKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173
           G      G                  +  +M    F +  +VH     K+    P +   
Sbjct: 121 GFQNNVNGG-----------------MAEYM---RFPKEAIVH-----KVPDDIPPEDAI 155

Query: 174 L---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230
           L   L C     L AV + A ++   +V + G G +GL +   A+     ++I +D+  +
Sbjct: 156 LIEPLACA----LHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDE 210

Query: 231 KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
           +   A+ FG    +NP + D  ++++  +LT G G D   E  G
Sbjct: 211 RLALARKFGADVVLNPPEVDV-VEKIK-ELTGGYGCDIYIEATG 252

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 80.4 bits (199), Expect = 5e-17
 Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 51/294 (17%)

Query: 19  NKPLVIEDVQVAPPQAGEVRIKILFTALCHTD----------AYTWSGKDPEGLF-PCIL 67
           + PLV+ DV    P  G+V +K+L   +C +D               G     L    +L
Sbjct: 8   DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67

Query: 68  GHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V   G G   +++ G  V       C +   C  G +        A G     
Sbjct: 68  GHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------EAPGG---- 117

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                                 +++Y ++ +  + ++     ++   L    +  GL AV
Sbjct: 118 ----------------------YAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVGLHAV 154

Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              A++ PG +  V G G +GLAV    KA G   ++  D  P++   A   G    V+P
Sbjct: 155 -RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDP 213

Query: 247 KDHDKPIQQVLVDLTDGGV---DYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
              D P      +L   G       FEC+G   +++  +E    G G  V+VGV
Sbjct: 214 AA-DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 80.2 bits (199), Expect = 5e-17
 Identities = 75/271 (27%), Positives = 106/271 (39%), Gaps = 68/271 (25%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           L  EDV V  P  GEV ++     +   D Y  SG  P  L P +LG E AG+VE+VG G
Sbjct: 14  LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL-PFVLGVEGAGVVEAVGPG 72

Query: 82  VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
           VT  + GD V   Y                                              
Sbjct: 73  VTGFKVGDRV--AY---------------------------------------------- 84

Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV---CLLGCGVPTGLGA---VWNTAKVEPG 195
                  +++Y VV    + K+ P    D+     LL      GL A   +  T  V+PG
Sbjct: 85  -AGPPGAYAEYRVVPASRLVKL-PDGISDETAAALLL-----QGLTAHYLLRETYPVKPG 137

Query: 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254
             V V    G VGL + + AKA GA  VIG     +K + A+  G    +N +D D   +
Sbjct: 138 DTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDEDFV-E 195

Query: 255 QVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
           +V  ++T G GVD  ++ +G       +L+ 
Sbjct: 196 RVR-EITGGRGVDVVYDGVG-KDTFEGSLDS 224

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 74.5 bits (183), Expect = 6e-15
 Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 34/297 (11%)

Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
           +V +KIL+  +CH+D +T   +     +P + GHE  GIV  +G+ V + + GD V +  
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 153
               C+ C+ C     N C K         M+      F+ N   I H  GT  +  Y+ 
Sbjct: 99  IVGSCKSCESCDQDLENYCPK---------MI------FTYNS--IGH-DGTKNYGGYSD 140

Query: 154 --VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 211
             VV    V +     PLD    L C   T    +      EPG  + V GLG +G    
Sbjct: 141 MIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200

Query: 212 EGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270
           +  KA G  +V  I     K D A    G   F+   D +K      +    G +DY  +
Sbjct: 201 KIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDPEK------MKAAIGTMDYIID 253

Query: 271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFK 326
            +  V  +   L    K  G  + +G+     E+    F LV GR +  G+  GG K
Sbjct: 254 TVSAVHAL-GPLLGLLKVNGKLITLGLPEKPLELPI--FPLVLGRKLVGGSDIGGIK 307

Length = 360

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 54/259 (20%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGE 80
           L + D+ V  P  GEV +++  + +   D Y  +G        P + G + AG+VE+VGE
Sbjct: 15  LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGE 74

Query: 81  GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
           GV  ++ GD V            +  +             G                   
Sbjct: 75  GVDGLKVGDRV------------WLTNLGWG------RRQG------------------- 97

Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK-VCLLGCGVP--TGLGAVWNTAKVEPGSI 197
                  T ++Y VV    +  +      ++   L   G+P  T   A+++ A  + G  
Sbjct: 98  -------TAAEYVVVPADQLVPLPDGVSFEQGAAL---GIPALTAYRALFHRAGAKAGET 147

Query: 198 VAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 256
           V V G  G VG A  + A+ AGA RVI      +  +  +  G     N +  D    ++
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED-LADRI 205

Query: 257 LVDLTDGGVDYSFECIGNV 275
           L      GVD   E + NV
Sbjct: 206 LAATAGQGVDVIIEVLANV 224

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 28/218 (12%)

Query: 11  KAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
             A+ +E +  + L +EDV+   P  GEV I++    +   D    +    + + P I G
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPG 59

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
            E AG+VE VG+ V  V+ GD V+   +     C  C SG   LC   R     GV+ N 
Sbjct: 60  AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLC---RNGGIIGVVSN- 115

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
                               +++Y VV + ++ KI      +    L     T   A+  
Sbjct: 116 ------------------GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-K 156

Query: 189 TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225
           TA + PG  V VFG  G  G+   + AK  GA  VI +
Sbjct: 157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAV 193

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 69/292 (23%), Positives = 114/292 (39%), Gaps = 59/292 (20%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
           KA V  +P  P  L + ++ +  P+ G V I++    L  ++ +T  G  P   FP +LG
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
            EA G VE    G     PG  V                           AT  G M   
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRV---------------------------ATAMGGMG-- 90

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
                + +G          ++++YT+V +  V  ID      ++  L     T  G+++ 
Sbjct: 91  ----RTFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFR 136

Query: 189 TAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVN 245
           +  ++PG  + + G GT  VGLA  + AKA GA  V      P++    K  G  E  ++
Sbjct: 137 SLGLQPGDTLLIRG-GTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194

Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
                + ++        GG D   E +G  ++ + +L     G G   + G+
Sbjct: 195 DGAIAEQLRAA-----PGGFDKVLELVGTATL-KDSLRHLRPG-GIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE 80
          L IE++ V  P AGEV I++    L   DA    G   E    P  LG+EAAG+VE+VG 
Sbjct: 15 LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGA 74

Query: 81 GVTEVQPGDHV 91
          GVT    GD V
Sbjct: 75 GVTGFAVGDRV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 50/249 (20%)

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
           P +LGHE  G +       + ++ G  V       C  CK+C S   N C  +R      
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMR------ 111

Query: 124 VMMNDRKSRFSINGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLL 175
                              F G++         F++Y VV          +A  +KV  +
Sbjct: 112 -------------------FFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD-EKV--M 149

Query: 176 GCGVPTGLGAVWNTAKVEPGSI----VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231
               P    AV   A  + G +    V V G+G +G  +    K  GA+ ++  D+ P+ 
Sbjct: 150 AFAEPL---AVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRS 206

Query: 232 FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291
              A+  G  + VNP++ D    +       G  D SFE  G+ S +   LE   +  G 
Sbjct: 207 LSLAREMGADKLVNPQNDDLDHYKA----EKGYFDVSFEVSGHPSSINTCLEVT-RAKGV 261

Query: 292 SVIVGVAAS 300
            V VG+  +
Sbjct: 262 MVQVGMGGA 270

Length = 343

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.4 bits (160), Expect = 6e-12
 Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 58/270 (21%)

Query: 10  CKAAVAWEPNKPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
            KA V  +P   L +   ++    P AGEV +K+    L   D    +   P   +P + 
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVP 60

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           G + AG+V +VG  VT  + GD V                                    
Sbjct: 61  GVDGAGVVVAVGAKVTGWKVGDRV------------------------------------ 84

Query: 128 DRKSRFSINGKPIYHFMGTS--TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
                        YH       +F++YTVV   +V  +      ++   L C   T   A
Sbjct: 85  ------------AYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132

Query: 186 VWNTAKVEPG-SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
           ++   ++E G +I+   G G VG    + AK AG  RVI      + F+  K+ G    +
Sbjct: 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVI 190

Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
           +  D D  + + + ++T G GVD   + +G
Sbjct: 191 DYNDED--VCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.9 bits (159), Expect = 9e-12
 Identities = 69/308 (22%), Positives = 105/308 (34%), Gaps = 72/308 (23%)

Query: 25  EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCILGHEAAGIVESVGEG 81
            +V +  P+ GEV +K+   ++   D     G     L   FP I G + AG V +VG G
Sbjct: 17  VEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSG 76

Query: 82  VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
           VT  + GD V                G+    G                           
Sbjct: 77  VTRFKVGDEVF---------------GRLPPKG--------------------------- 94

Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
              G    ++Y V  +  +AK     +  +   L   G+ T L A+ +  KV+PG  V +
Sbjct: 95  --GG--ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQALRDAGKVKPGQRVLI 149

Query: 201 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259
            G  G VG    + AKA GA  V G+    +  +  ++ G  E ++    D      +  
Sbjct: 150 NGASGGVGTFAVQIAKALGA-HVTGVCS-TRNAELVRSLGADEVIDYTTED-----FVAL 202

Query: 260 LTDGGV-DYSFECIGNVSVMRAALECCH--KGWGTSVIVGVAASGQEISTRPFQLVTGRV 316
              G   D  F+ +GN     +        K  G  V VG              L+   +
Sbjct: 203 TAGGEKYDVIFDAVGNSP--FSLYRASLALKPGGRYVSVG--------GGPSGLLLVLLL 252

Query: 317 WKGTAFGG 324
              T  GG
Sbjct: 253 LPLTLGGG 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 11 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
          KA V      P V E  +V  PQ   G+V +++  + +   D     G        P IL
Sbjct: 2  KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61

Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQ 96
          G + AG+VE+VGEGVT  + GD V  C  
Sbjct: 62 GCDVAGVVEAVGEGVTRFRVGDEVYGCAG 90

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 66/288 (22%), Positives = 102/288 (35%), Gaps = 74/288 (25%)

Query: 13  AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAA 72
           A+  +    L +ED+    P  GE  +++L   +C+TD   + G  P   FP + GHE  
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFV 59

Query: 73  GIVESVGEG-------VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           GIVE   E        V E+             C  C++C+ G    C            
Sbjct: 60  GIVEEGPEAELVGKRVVGEI----------NIACGRCEYCRRGLYTHC------------ 97

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG--- 182
               ++   I  +          F++Y               PL+ + ++   VP     
Sbjct: 98  --PNRTVLGIVDRD-------GAFAEYLT------------LPLENLHVVPDLVPDEQAV 136

Query: 183 ----LGAVWNT---AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
               L A         + PG  VAV G G +GL +A+     G   V+ +    +K   A
Sbjct: 137 FAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALA 195

Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
           +  GV E V P +          +   GG D   E  G+ S +  AL 
Sbjct: 196 RRLGV-ETVLPDE---------AESEGGGFDVVVEATGSPSGLELALR 233

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 63.0 bits (154), Expect = 4e-11
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD------AYTWSGKDPEGLFP 64
           KA         + + D+    P  GEV ++ L   +C TD       Y  +   P G   
Sbjct: 2   KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTA---PPGEDF 58

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC----GKVRGAT 120
            +LGHEA G+VE VG+G + + PGD V+P  +    +C  C+ G+ + C       RG  
Sbjct: 59  LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK 117

Query: 121 GA-GVM 125
           G  G M
Sbjct: 118 GLHGFM 123

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 62.9 bits (153), Expect = 5e-11
 Identities = 58/211 (27%), Positives = 86/211 (40%), Gaps = 18/211 (8%)

Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
           +V IK+++  +CHTD +          +P + GHE  G V  VG  V++   GD V +  
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
               C EC  CKS     C K   +       ND       +GKP         F+   V
Sbjct: 96  IVGCCGECSPCKSDLEQYCNKRIWS------YND----VYTDGKPT-----QGGFASAMV 140

Query: 155 VHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 213
           V    V KI +  AP     LL  GV T    + +    + G    + GLG VG    + 
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199

Query: 214 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
           AKA G    +    D K+ +  ++ G  +++
Sbjct: 200 AKAMGHHVTVISSSDKKREEALEHLGADDYL 230

Length = 357

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 20 KPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAGI 74
           PLV+E V +   PP  GEV +++L   +  +D  T SG     P    P + G+E  G+
Sbjct: 10 LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP--LPAVPGNEGVGV 67

Query: 75 VESVGEGVTEVQPGDHVIP 93
          V  VG GV+ +  G  V+P
Sbjct: 68 VVEVGSGVSGLLVGQRVLP 86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 58.6 bits (143), Expect = 1e-09
 Identities = 66/274 (24%), Positives = 98/274 (35%), Gaps = 69/274 (25%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
           KA V  EP  P  L + +V    P  GEV I++    +   D     G    P G    I
Sbjct: 2   KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASD-I 60

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           LG E AG+V +VG GVT  + GD V                     C  + G  G     
Sbjct: 61  LGLEVAGVVVAVGPGVTGWKVGDRV---------------------CALLAG--GG---- 93

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 182
                                 +++Y VV    +  +     L +       +P    T 
Sbjct: 94  ----------------------YAEYVVVPAGQLLPVPEGLSLVE----AAALPEVFFTA 127

Query: 183 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
              ++    ++ G  V + G G   VG A  + AKA GA RVI      +K +  +  G 
Sbjct: 128 WQNLFQLGGLKAGETVLIHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGA 185

Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
              +N +  D    + + + T G GVD   + +G
Sbjct: 186 DVAINYRTED--FAEEVKEATGGRGVDVILDMVG 217

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 78/301 (25%), Positives = 113/301 (37%), Gaps = 31/301 (10%)

Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
           +V +KILF  +CH+D +T         +P I GHE  GI   VG+ VT+ + GD V +  
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
               C+ C+ C     N C KV                F+ N +          +S   V
Sbjct: 93  IIGSCQSCESCNQDLENYCPKV---------------VFTYNSRSSDGTRNQGGYSDVIV 137

Query: 155 VHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 213
           V    V  I    P D    L C G+       +     E G  + V GLG +G    + 
Sbjct: 138 VDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKI 197

Query: 214 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
            KA G    +      K+ +     G   F+   D  K  + V      G +D+    I 
Sbjct: 198 GKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAV------GTMDF---IID 248

Query: 274 NVSVMRAALECCH--KGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFKSRSQ 330
            VS   A L      K  G  V +G+     ++    F LV GR +  G+  GG K   +
Sbjct: 249 TVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPI--FPLVLGRKMVGGSQIGGMKETQE 306

Query: 331 V 331
           +
Sbjct: 307 M 307

Length = 375

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIV 75
          +P   L I +V    P AGEV ++   + + + D +T  G        P I G EA G+V
Sbjct: 11 DPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVV 70

Query: 76 ESVGEGVTEVQPGDHV 91
          ++VGEGV  +Q G  V
Sbjct: 71 DAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 21 PLVIEDVQVAP--PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78
          P V++ V+  P  P   EV+++     + + D Y  SG  P    P  LG EAAG+V  V
Sbjct: 13 PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKV 72

Query: 79 GEGVTEVQPGDHVI 92
          G GV  ++ GD V+
Sbjct: 73 GSGVKHIKVGDRVV 86

Length = 327

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILGHEAAGIVESVG 79
          L +E   +  P +GEVR+++    L   D     G         P + G E AG VE+VG
Sbjct: 14 LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP-PFVPGFECAGTVEAVG 72

Query: 80 EGVTEVQPGDHVI 92
          EGV + + GD V+
Sbjct: 73 EGVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92
           EV +++    L   D     G  P       LG E +GIV  VG GVT ++ GD V+
Sbjct: 1  DEVEVEVKAAGLNFRDVLVALGLLPGD--ETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 54/259 (20%), Positives = 83/259 (32%), Gaps = 62/259 (23%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVG 79
           L I +     P+  +V IK+    +   D     GK   P G    ILG E AG VE VG
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-ILGLEVAGYVEDVG 74

Query: 80  EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
             V   + GD V+                       + G                     
Sbjct: 75  SDVKRFKEGDRVM---------------------ALLPGG-------------------- 93

Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TGLGAVWNTAKVEPG 195
                    +++Y V H   V  I      ++       +P    T    +     V+ G
Sbjct: 94  --------GYAEYAVAHKGHVMHIPQGYTFEE----AAAIPEAFLTAWQLLKKHGDVKKG 141

Query: 196 SIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254
             V +  G   VG A A+ A+  GA+ +I      +K D  K       +   D +    
Sbjct: 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPDEEGFAP 200

Query: 255 QVLVDLTDGGVDYSFECIG 273
           +V     + GV+   +C+G
Sbjct: 201 KVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 70/324 (21%), Positives = 105/324 (32%), Gaps = 72/324 (22%)

Query: 16  WEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDP-----EGLFPCILGH 69
            EP + L +E  ++ PP    EV +K+L   +   D     G  P         P + G+
Sbjct: 10  GEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGN 69

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           E  G V  VG GV  ++PGD VIP                           G G      
Sbjct: 70  EGVGEVVKVGSGVKSLKPGDWVIP------------------------LRPGLG------ 99

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
                             T+  + VV    + K+      ++   L     T    + + 
Sbjct: 100 ------------------TWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDF 141

Query: 190 AKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV 244
            K++PG  V   G    VG AV + AK  G  + I +  D    +  K      G    +
Sbjct: 142 VKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVL 200

Query: 245 NPKD-HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ- 302
             ++       ++L     G    +  C+G  S    A      G GT V  G   SGQ 
Sbjct: 201 TEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELA-RLLSPG-GTMVTYG-GMSGQP 257

Query: 303 -EISTRPFQLVTGRVWKGTAFGGF 325
             + T         ++K     GF
Sbjct: 258 VTVPTSLL------IFKDITLRGF 275

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 65/273 (23%), Positives = 94/273 (34%), Gaps = 77/273 (28%)

Query: 24  IEDVQVAPPQAGEVRIKILFTALCHTDAYT--WSGKDPEGLFPCILGHEAAGIVESVGEG 81
           +E+V V  P  G+V ++ L+ +L   D Y        P    P  LG    G    V + 
Sbjct: 29  LEEVDVPEPGEGQVLLRTLYLSL---DPYMRGRMSDAPSYAPPVELGEVMVGGT--VAKV 83

Query: 82  V----TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
           V       QPGD V+                                             
Sbjct: 84  VASNHPGFQPGDIVV--------------------------------------------- 98

Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDP-QAPL-DKVCLLGCGVPTGLGA---VWNTAKV 192
                  G S + +Y +     + K+DP  APL   + +LG     GL A   + +  + 
Sbjct: 99  -------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLG---MPGLTAYFGLLDIGQP 148

Query: 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHD 250
           + G  V V    G VG  V + AK  G  RV+GI    +K D      G    ++ K  D
Sbjct: 149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED 207

Query: 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
               Q L +    G+D  FE +G   V+ A L 
Sbjct: 208 --FAQALKEACPKGIDVYFENVGGE-VLDAVLP 237

Length = 340

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 11 KAAVAWEPNK---PLVIEDVQVAPPQAG--EVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
          KA    +P     P  + D+++  P  G  ++ +++   ++   D    +G  P    P 
Sbjct: 2  KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61

Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHV 91
          ILG +A+G+VE+VG  VT  + GD V
Sbjct: 62 ILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 21  PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVES 77
           PL   +  V  P  GE+ +++    +C TD +   G  P     + P   GHE  G V  
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTP---GHEVVGEVAG 70

Query: 78  VGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVR 117
            G        GD V I   +  C  C++C+ G  NLC   R
Sbjct: 71  RGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASR 111

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 49.6 bits (119), Expect = 9e-07
 Identities = 66/253 (26%), Positives = 93/253 (36%), Gaps = 59/253 (23%)

Query: 24  IEDVQVAPPQAGEVRIKILFTALCHTDA-YTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82
           I DV V  P  GEV +K  F  +  +D  +T    DP    P   G E  G V +VGEGV
Sbjct: 20  IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79

Query: 83  TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 142
           T+ + GD V                                                   
Sbjct: 80  TDFKVGDAVA-------------------------------------------------- 89

Query: 143 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 202
            M    F++Y VV       + P+   + + LL  G+ T   A+    +++ G  V V  
Sbjct: 90  TMSFGAFAEYQVVPARHAVPV-PELKPEVLPLLVSGL-TASIALEEVGEMKSGETVLVTA 147

Query: 203 L--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
              GT   AV + AK AG   VIG     +K +  K+ G    +N K  D  + +VL   
Sbjct: 148 AAGGTGQFAV-QLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKE 203

Query: 261 TDGGVDYSFECIG 273
              GVD  +E +G
Sbjct: 204 YPKGVDVVYESVG 216

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 65/282 (23%), Positives = 96/282 (34%), Gaps = 79/282 (28%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAY--TWSGKDPEGLFPCILGH--EAAGI--- 74
             + +V +   + GEV ++ L+ ++   D Y   W         P  LG      G+   
Sbjct: 20  FELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV 76

Query: 75  VESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS 134
           VES        + GD V                                           
Sbjct: 77  VESRSPD---FKVGDLV------------------------------------------- 90

Query: 135 INGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLG-CGVP--TGLGAVWNTA 190
                   F+G   + +Y VV   S + K+DP   L     LG  G+   T    +    
Sbjct: 91  ------SGFLG---WQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIG 141

Query: 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKD 248
           K +PG  V V    G VG  V + AK  GA RV+GI    +K        G    +N K 
Sbjct: 142 KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT 200

Query: 249 HDKPIQQVLVDLTDGGVDYSFECIGNV--SVMRAALECCHKG 288
            D  + + L +    G+D  F+   NV   ++ AAL   +KG
Sbjct: 201 PD--LAEALKEAAPDGIDVYFD---NVGGEILDAALTLLNKG 237

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 28 QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86
          +VAPP  GEVRI++   +L   D     G  P    +P   G EA+G+V +VG  VT + 
Sbjct: 1  EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 87 PGDHVI 92
           GD VI
Sbjct: 61 VGDEVI 66

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 46.6 bits (111), Expect = 9e-06
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC----------- 65
           +P + + +EDV V     GEV + ++   + + + +   G+ P   F             
Sbjct: 25  DPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGE-PVSTFAARQRRGRDEPYH 83

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI 92
           I G +A+GIV +VGEGV   + GD V+
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVV 110

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           I+G +A+G+V  VG GVT  + GD V+  C Q +       + G   L  + R       
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPD-GRDGDPMLSSEQR------- 131

Query: 125 MMNDRKSRFSINGKPIYHFMGT-STFSQYTVVHDVSVAKIDPQAPL----DKVCLLGCGV 179
                          I+ +     +F+++ +V D    ++ P+       +  C    G 
Sbjct: 132 ---------------IWGYETNFGSFAEFALVKD---YQLMPKPKHLTWEEAACPGLTG- 172

Query: 180 PTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
            T    +  WN A V+PG  V ++G  G +G    + A+A G + V  +   P+K +  +
Sbjct: 173 ATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPV-AVVSSPEKAEYCR 231

Query: 237 NFGVTEFVNPKDHD 250
           + G    ++  D  
Sbjct: 232 SLGAEAVIDRNDFG 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 77
          L + +  +  P AGEV +K+  + +   D       +  + P    P   G++  G V++
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPP---LPFTPGYDLVGRVDA 71

Query: 78 VGEGVTEVQPGDHVI 92
          +G GVT  + GD V 
Sbjct: 72 LGSGVTGFEVGDRVA 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 43.5 bits (104), Expect = 8e-05
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVI 92
          LG E AG+V  VG GVT +  GD V+
Sbjct: 26 LGGECAGVVTRVGPGVTGLAVGDRVM 51

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 13 AVAWEPNKPL----VIEDVQVAPPQAGE--VRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
          AV ++   P+     + D+ +  P+ G   + +++   ++   D    +   PE   P I
Sbjct: 2  AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKI 61

Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV 91
          LG +AAG+V +VG+ VT  +PGD V
Sbjct: 62 LGWDAAGVVVAVGDEVTLFKPGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 19/146 (13%)

Query: 143 FMGTSTFSQYTVV---HDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-----AKVE 193
           + G  T SQY +V    D  S+ +      L++        P  LG  +        K+ 
Sbjct: 95  YGGQGTLSQYLLVDPKKDKKSITRKPENISLEE----AAAWPLVLGTAYQILEDLGQKLG 150

Query: 194 PGSIVAVFGLGT-VGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD- 250
           P S V V G  T VG    + AK       V+G     +  +  K  G   F++   H  
Sbjct: 151 PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSG 209

Query: 251 -KPIQQVLVDLTDGG-VDYSFECIGN 274
            K ++ VL ++   G  D   +C+G 
Sbjct: 210 VKLLKPVLENVKGQGKFDLILDCVGG 235

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 11 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
          KA    EP  P V+  V+V  P   AGEV I++    +   D    +GK   P G    I
Sbjct: 2  KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASD-I 60

Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV 91
          LG E AG V +VGEGV+  + GD V
Sbjct: 61 LGLEVAGEVVAVGEGVSRWKVGDRV 85

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           + + G G VG ++AE  +  G   V+ ID DP++ +  +  GV 
Sbjct: 1   IIIIGYGRVGRSLAEELREGG-PDVVVIDKDPERVEELREEGVP 43

This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116

>gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 176 GCGVPTGLGA----VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231
             GV  G+ A    +  T  +E G  VAV GLG VG  +AE     GA ++I  DI+ + 
Sbjct: 6   AYGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEA 63

Query: 232 FDRA-KNFGVT 241
             RA + FG T
Sbjct: 64  VARAAELFGAT 74

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200

>gnl|CDD|234094 TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
           +AV GLG VGL +A      G   V G+DID +K D+    G +    P
Sbjct: 3   IAVIGLGYVGLPLAALLADLGHD-VTGVDIDQEKVDKLNK-GKSPIYEP 49

Enzymes in this family catalyze the NAD-dependent alcohol-to-acid oxidation of nucleotide-linked sugars. Examples include UDP-glucose 6-dehydrogenase (1.1.1.22) , GDP-mannose 6-dehydrogenase (1.1.1.132) , UDP-N-acetylglucosamine 6-dehydrogenase (1.1.1.136), UDP-N-acetyl-D-galactosaminuronic acid dehydrogenase and UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase. These enzymes are most often involved in the biosynthesis of polysaccharides and are often found in operons devoted to that purpose. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. Length = 409

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 59/258 (22%), Positives = 97/258 (37%), Gaps = 62/258 (24%)

Query: 13  AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCH-TDAYTWSGKDPE--GL-FPCILG 68
           A+       + + +V + PP  G++ ++I ++ +   T+   W+G  P   G+ +P + G
Sbjct: 4   AIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPG 63

Query: 69  HEAAGIVESVGEGVTEVQPGDHV-IP---CYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           +E+ G V   G      +PGD V +P   CY                    VRG  G   
Sbjct: 64  YESVGRVVEAGPDTGF-RPGDRVFVPGSNCY------------------EDVRGLFGGA- 103

Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
                                    S+  V     V ++DP   L     L     T   
Sbjct: 104 -------------------------SKRLVTPASRVCRLDPA--LGPQGALLALAATARH 136

Query: 185 AV-WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
           AV     KV P  IV   G GT+G  +A   KAAG S     + +P++ D A  + V   
Sbjct: 137 AVAGAEVKVLPDLIV---GHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEV--- 190

Query: 244 VNPKDHDKPIQQVLVDLT 261
           ++P+   +   + + D +
Sbjct: 191 LDPEKDPRRDYRAIYDAS 208

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|223749 COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
           + V GLG VGL +A  A A+   +VIG+DI+ KK D+   
Sbjct: 12  IGVIGLGYVGLPLA-AAFASAGFKVIGVDINQKKVDKLNR 50

Length = 436

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 20 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESV 78
          K L + + +V  P  GEV IK+    +  +D     G+       P   G E +G V + 
Sbjct: 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAA 75

Query: 79 GEGV 82
          G G 
Sbjct: 76 GGGP 79

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 58/246 (23%), Positives = 85/246 (34%), Gaps = 64/246 (26%)

Query: 25  EDVQVAPPQAGEVRIKILFTALCHTDAYT---WSGKD----------------PEGL-FP 64
           +DV V  P  GEV I++    + +TD  T   W   +                   L FP
Sbjct: 19  DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
            I G +  G V +VGEGV   + G+ V+                       +R       
Sbjct: 79  RIQGADIVGRVVAVGEGVDTARIGERVL---------VDPS----------IRDPPEDDP 119

Query: 125 MMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGV 179
              D              ++G+     F++YTVV   +   ++   PL  V L    C  
Sbjct: 120 ADID--------------YIGSERDGGFAEYTVVPAENAYPVNS--PLSDVELATFPCSY 163

Query: 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
            T    +   A V  G  V V G  G VG A+ + AK  GA  VI +     K +  +  
Sbjct: 164 STAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV-AGAAKEEAVRAL 220

Query: 239 GVTEFV 244
           G    +
Sbjct: 221 GADTVI 226

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|222236 pfam13578, Methyltransf_24, Methyltransferase domain

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 201 FGLGTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258
            G+ T  L +A+  K  G  R+  ID  P  +     +  G+ + V          + L 
Sbjct: 7   SGVST--LWLAQALKDNGLGRLYSIDPWPGAEAGANLRKAGLADRVRL--LRGDSLEALA 62

Query: 259 DLTDGGVDYSF 269
            L DG +D  F
Sbjct: 63  RLPDGSIDLLF 73

This family appears to be a methyltransferase domain. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.98
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.98
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.92
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.89
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.79
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.31
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.15
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.45
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.25
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.13
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.12
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.1
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.98
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.97
PLN02494	477	adenosylhomocysteinase	97.94
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.92
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.87
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.86
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.77
PRK08324	681	short chain dehydrogenase; Validated	97.68
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.68
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.61
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.59
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.57
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.35
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.3
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.26
PRK05693	274	short chain dehydrogenase; Provisional	97.18
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.18
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.17
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.14
PRK06182	273	short chain dehydrogenase; Validated	97.14
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.13
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.12
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.1
PRK05993	277	short chain dehydrogenase; Provisional	96.99
PRK12742	237	oxidoreductase; Provisional	96.95
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.85
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.85
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.84
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.82
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	96.75
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.74
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.72
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.64
PLN03209	576	translocon at the inner envelope of chloroplast su	96.63
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.62
PRK04148	134	hypothetical protein; Provisional	96.61
PRK07326	237	short chain dehydrogenase; Provisional	96.61
TIGR00438	188	rrmJ cell division protein FtsJ.	96.6
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.58
PRK08017	256	oxidoreductase; Provisional	96.58
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.57
PRK07109	334	short chain dehydrogenase; Provisional	96.55
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.52
PRK06139	330	short chain dehydrogenase; Provisional	96.5
PRK07806	248	short chain dehydrogenase; Provisional	96.49
PRK08265	261	short chain dehydrogenase; Provisional	96.48
PRK12828	239	short chain dehydrogenase; Provisional	96.47
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.46
PRK07060	245	short chain dehydrogenase; Provisional	96.3
PRK12939	250	short chain dehydrogenase; Provisional	96.25
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.24
PRK06057	255	short chain dehydrogenase; Provisional	96.23
PRK08177	225	short chain dehydrogenase; Provisional	96.22
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.22
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.19
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.17
PRK06953	222	short chain dehydrogenase; Provisional	96.16
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
PRK08628	258	short chain dehydrogenase; Provisional	96.13
PRK07576	264	short chain dehydrogenase; Provisional	96.13
PRK14967	223	putative methyltransferase; Provisional	96.05
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.01
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.01
PRK06949	258	short chain dehydrogenase; Provisional	95.99
PRK07832	272	short chain dehydrogenase; Provisional	95.98
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.98
PLN02780	320	ketoreductase/ oxidoreductase	95.95
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.94
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.94
PRK07831	262	short chain dehydrogenase; Provisional	95.93
PRK08267	260	short chain dehydrogenase; Provisional	95.93
PRK05872	296	short chain dehydrogenase; Provisional	95.91
PRK07814	263	short chain dehydrogenase; Provisional	95.91
PRK09291	257	short chain dehydrogenase; Provisional	95.9
PRK12829	264	short chain dehydrogenase; Provisional	95.89
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.89
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.88
PRK06128	300	oxidoreductase; Provisional	95.88
PRK07825	273	short chain dehydrogenase; Provisional	95.85
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.83
PRK06841	255	short chain dehydrogenase; Provisional	95.81
PRK06484	520	short chain dehydrogenase; Validated	95.8
PRK09186	256	flagellin modification protein A; Provisional	95.78
PRK08339	263	short chain dehydrogenase; Provisional	95.78
PRK06180	277	short chain dehydrogenase; Provisional	95.78
PRK09242	257	tropinone reductase; Provisional	95.77
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
CHL00194	317	ycf39 Ycf39; Provisional	95.76
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.75
COG4122	219	Predicted O-methyltransferase [General function pr	95.75
PRK07402	196	precorrin-6B methylase; Provisional	95.72
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.69
PRK08263	275	short chain dehydrogenase; Provisional	95.69
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.67
PRK05866	293	short chain dehydrogenase; Provisional	95.66
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.64
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.63
PRK06196	315	oxidoreductase; Provisional	95.62
PRK05867	253	short chain dehydrogenase; Provisional	95.62
PRK06398	258	aldose dehydrogenase; Validated	95.6
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.6
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.58
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.56
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.54
PLN02366	308	spermidine synthase	95.54
PRK06101	240	short chain dehydrogenase; Provisional	95.53
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.53
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.51
PRK07774	250	short chain dehydrogenase; Provisional	95.51
PRK09072	263	short chain dehydrogenase; Provisional	95.5
PRK11207	197	tellurite resistance protein TehB; Provisional	95.5
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.49
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.46
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.46
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.45
PRK00811	283	spermidine synthase; Provisional	95.45
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.45
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.44
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.42
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.41
PRK07985	294	oxidoreductase; Provisional	95.38
PRK06484	520	short chain dehydrogenase; Validated	95.38
PRK06483	236	dihydromonapterin reductase; Provisional	95.36
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.34
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.33
PRK07904	253	short chain dehydrogenase; Provisional	95.32
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.32
PRK07024	257	short chain dehydrogenase; Provisional	95.32
PRK06500	249	short chain dehydrogenase; Provisional	95.32
PRK07478	254	short chain dehydrogenase; Provisional	95.3
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.28
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.26
PRK07062	265	short chain dehydrogenase; Provisional	95.24
PRK12937	245	short chain dehydrogenase; Provisional	95.23
PRK08618	325	ornithine cyclodeaminase; Validated	95.23
PRK08317	241	hypothetical protein; Provisional	95.23
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.23
COG2910	211	Putative NADH-flavin reductase [General function p	95.22
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.2
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.19
PRK05876	275	short chain dehydrogenase; Provisional	95.19
PRK08589	272	short chain dehydrogenase; Validated	95.19
PLN02476	278	O-methyltransferase	95.17
PRK05854	313	short chain dehydrogenase; Provisional	95.17
PRK07890	258	short chain dehydrogenase; Provisional	95.16
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.15
PRK07454	241	short chain dehydrogenase; Provisional	95.14
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.13
PRK08703	239	short chain dehydrogenase; Provisional	95.12
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.12
PRK04457	262	spermidine synthase; Provisional	95.12
PRK00536	262	speE spermidine synthase; Provisional	95.12
PRK07063	260	short chain dehydrogenase; Provisional	95.11
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.09
PRK06181	263	short chain dehydrogenase; Provisional	95.09
KOG0725	270	consensus Reductases with broad range of substrate	95.08
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.07
PRK06179	270	short chain dehydrogenase; Provisional	95.06
PRK06482	276	short chain dehydrogenase; Provisional	95.06
PRK06194	287	hypothetical protein; Provisional	95.06
PRK05884	223	short chain dehydrogenase; Provisional	95.05
PRK06172	253	short chain dehydrogenase; Provisional	95.04
PRK06940	275	short chain dehydrogenase; Provisional	95.03
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.0
PRK06701	290	short chain dehydrogenase; Provisional	95.0
PRK08219	227	short chain dehydrogenase; Provisional	94.98
PRK07677	252	short chain dehydrogenase; Provisional	94.95
PLN02253	280	xanthoxin dehydrogenase	94.94
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	94.94
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.94
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.93
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.93
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	94.92
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.92
PRK08643	256	acetoin reductase; Validated	94.9
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.9
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.89
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.89
PRK06198	260	short chain dehydrogenase; Provisional	94.89
PRK06114	254	short chain dehydrogenase; Provisional	94.88
PRK07856	252	short chain dehydrogenase; Provisional	94.88
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.88
PRK08264	238	short chain dehydrogenase; Validated	94.87
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	94.87
PRK08226	263	short chain dehydrogenase; Provisional	94.86
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.84
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	94.83
PRK12367	245	short chain dehydrogenase; Provisional	94.82
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.82
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.81
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.8
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.79
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.79
PRK06125	259	short chain dehydrogenase; Provisional	94.78
PRK10538	248	malonic semialdehyde reductase; Provisional	94.77
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.75
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.75
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.74
PRK07035	252	short chain dehydrogenase; Provisional	94.73
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.73
PRK08251	248	short chain dehydrogenase; Provisional	94.73
PRK06197	306	short chain dehydrogenase; Provisional	94.73
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.72
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.71
PRK08862	227	short chain dehydrogenase; Provisional	94.7
PRK07574	385	formate dehydrogenase; Provisional	94.7
PRK05875	276	short chain dehydrogenase; Provisional	94.69
PRK06138	252	short chain dehydrogenase; Provisional	94.69
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.64
PRK08328	231	hypothetical protein; Provisional	94.64
PRK07067	257	sorbitol dehydrogenase; Provisional	94.63
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.63
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.62
PRK07074	257	short chain dehydrogenase; Provisional	94.61
PRK12747	252	short chain dehydrogenase; Provisional	94.61
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.59
PRK08303	305	short chain dehydrogenase; Provisional	94.57
PRK05717	255	oxidoreductase; Validated	94.57
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.56
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.56
PRK06914	280	short chain dehydrogenase; Provisional	94.55
PRK07577	234	short chain dehydrogenase; Provisional	94.55
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.54
PRK07791	286	short chain dehydrogenase; Provisional	94.52
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.51
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	94.51
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.5
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.49
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.46
PLN02244	340	tocopherol O-methyltransferase	94.45
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.43
PLN03139	386	formate dehydrogenase; Provisional	94.42
PLN03075	296	nicotianamine synthase; Provisional	94.41
PRK06720	169	hypothetical protein; Provisional	94.4
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.4
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.37
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.36
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.28
PRK12743	256	oxidoreductase; Provisional	94.27
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.27
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.24
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.17
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.15
PRK10669	558	putative cation:proton antiport protein; Provision	94.09
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.09
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	94.08
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.08
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.07
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.06
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.06
PRK01581	374	speE spermidine synthase; Validated	94.04
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	94.03
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.02
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.01
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.98
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.98
PRK08278	273	short chain dehydrogenase; Provisional	93.97
PRK06523	260	short chain dehydrogenase; Provisional	93.95
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	93.86
PRK07417	279	arogenate dehydrogenase; Reviewed	93.86
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.82
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.82
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.79
PRK07102	243	short chain dehydrogenase; Provisional	93.75
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	93.75
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.74
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.73
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.72
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.71
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.7
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.66
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.65
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	93.63
PLN00203	519	glutamyl-tRNA reductase	93.61
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.58
PRK05650	270	short chain dehydrogenase; Provisional	93.58
PRK07340	304	ornithine cyclodeaminase; Validated	93.57
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.56
PLN02928	347	oxidoreductase family protein	93.56
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	93.55
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.54
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.54
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.51
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.5
PRK13243	333	glyoxylate reductase; Reviewed	93.49
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	93.47
PRK04266	226	fibrillarin; Provisional	93.45
PLN02490	340	MPBQ/MSBQ methyltransferase	93.42
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.41
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	93.4
PRK08309	177	short chain dehydrogenase; Provisional	93.37
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	93.35
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.34
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.34
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	93.33
PRK06849	389	hypothetical protein; Provisional	93.31
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.31
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.31
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.3
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.27
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.23
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.23
PLN02589	247	caffeoyl-CoA O-methyltransferase	93.14
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.14
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.13
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.12
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.12
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.1
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.09
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.07
PRK10258	251	biotin biosynthesis protein BioC; Provisional	92.99
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	92.97
PRK05855	582	short chain dehydrogenase; Validated	92.95
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	92.95
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	92.93
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	92.92
PRK13403	335	ketol-acid reductoisomerase; Provisional	92.9
PLN00016	378	RNA-binding protein; Provisional	92.89
PRK09135	249	pteridine reductase; Provisional	92.87
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.84
PRK07411	390	hypothetical protein; Validated	92.83
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	92.83
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	92.8
PRK08300	302	acetaldehyde dehydrogenase; Validated	92.79
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.79
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	92.78
PLN02823	336	spermine synthase	92.78
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	92.74
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	92.73
PRK07775	274	short chain dehydrogenase; Provisional	92.73
PRK09496	453	trkA potassium transporter peripheral membrane com	92.7
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	92.69
PLN02256	304	arogenate dehydrogenase	92.59
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	92.52
KOG1252	362	consensus Cystathionine beta-synthase and related	92.52
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	92.51
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	92.5
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	92.49
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	92.44
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.44
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	92.44
PRK07578	199	short chain dehydrogenase; Provisional	92.43
PRK08936	261	glucose-1-dehydrogenase; Provisional	92.4
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	92.4
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	92.35
PRK08223	287	hypothetical protein; Validated	92.35
PRK13984	604	putative oxidoreductase; Provisional	92.29
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	92.29
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	92.26
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.25
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	92.19
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	92.16
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	92.15
cd02440	107	AdoMet_MTases S-adenosylmethionine-dependent methy	92.15
PRK12935	247	acetoacetyl-CoA reductase; Provisional	92.11
PRK14968	188	putative methyltransferase; Provisional	92.08
PRK12480	330	D-lactate dehydrogenase; Provisional	92.02
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.0
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	91.96
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	91.94

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.8e-62  Score=431.54  Aligned_cols=339  Identities=77%  Similarity=1.291  Sum_probs=326.6

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ..++++||++.+++++||.++|+..++|+.+||+||++++++||+|.+.++|..+...+|.++|||++|+|+++|..|++
T Consensus         3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~   82 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT   82 (375)
T ss_pred             CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence            45689999999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||+|+..+...|++|++|++++.|+|.........+....+|.+|+.-+|+++|||++..+|+||.+++...+++|+
T Consensus        83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            99999999999999999999999999999999998878888789999999999999999999999999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +..+++.++.+.|.++|+|.|.++.+++++|+++.|+|.|++|++++|-||+.|+.+||++|-+++|++.++++|+++++
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i  242 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI  242 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  324 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  324 (345)
                      |+.+....+.+.+.+.|++|+|+.|||+|..++..+++.+...+||+-+++|..+.++.+++++++|+.+.++.|+.+|+
T Consensus       243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG  322 (375)
T KOG0022|consen  243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG  322 (375)
T ss_pred             ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence            99865557889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++.+++++.+++.+.+++.
T Consensus       323 ~K~~~~iP~lV~~y~~~~l  341 (375)
T KOG0022|consen  323 FKSKSDIPKLVKDYMKKKL  341 (375)
T ss_pred             ccchhhhhHHHHHHHhCcc
Confidence            9999999999998888764

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.7e-62  Score=438.49  Aligned_cols=332  Identities=64%  Similarity=1.097  Sum_probs=320.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |++||++.+++++|++++++++++|++||||||+.++|+||+|.+.++|..|.+ +|.++|||++|+|+++|++|+.++|
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            468999999999999999999999999999999999999999999999999888 9999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+..+.-+|+.|++|+++++|+|.........|.. .+|.++++.++.+++|+++.++|+||.++++.++++++++.
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            99999999999999999999999999998888888876 99999999999999999999999999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++.++.+.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+.+||+++.+++|+++++++|+++++|.+
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~  238 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK  238 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS  327 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  327 (345)
                      +.. +..+.+.+++++++|++||++|....+++++.++.+ ||+.+++|....+..+++++..|+.+.+|+|+++|+...
T Consensus       239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p  316 (366)
T COG1062         239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP  316 (366)
T ss_pred             hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence            732 689999999999999999999999999999999999 599999999888889999999998899999999999999


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      +.|++.++++|.+|+.
T Consensus       317 ~~diP~lv~~y~~Gkl  332 (366)
T COG1062         317 RSDIPRLVDLYMAGKL  332 (366)
T ss_pred             ccchhHHHHHHHcCCC
Confidence            9999999999999985

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.2e-61  Score=441.92  Aligned_cols=302  Identities=33%  Similarity=0.487  Sum_probs=276.3

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +++|||+++.+.++++++++++.|+|+++||+|||.|+|+||+|++.++|.++...+|++||||.+|+|+++|++|+.|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            46899999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             CCCEEEe-cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        87 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      +||||.+ +...+|++|.||++|++++|++...   .|.+ .+                  |+||||+++|+.+++++|+
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~------------------GGyaeyv~v~~~~~~~iP~  138 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TD------------------GGYAEYVVVPARYVVKIPE  138 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ec------------------CcceeEEEEchHHeEECCC
Confidence            9999988 8899999999999999999999765   3333 44                  4999999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++++.+||.+.|++.|.|++| +..+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus       139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~  216 (339)
T COG1064         139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN  216 (339)
T ss_pred             CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence            999999999999999999998 55999999999999999999999999999998 9999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      ..+  ++..+.+.+.    +|+++|+++ +.+++.++++|+++ |+++++|.........++...++. +++|.||..++
T Consensus       217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~  288 (339)
T COG1064         217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT  288 (339)
T ss_pred             cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence            874  5566666553    999999999 78899999999998 999999996423456688887777 99999999986


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                      +   .|.++++++..+|++
T Consensus       289 ~---~d~~e~l~f~~~g~I  304 (339)
T COG1064         289 R---ADLEEALDFAAEGKI  304 (339)
T ss_pred             H---HHHHHHHHHHHhCCc
Confidence            5   889999999988875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-55  Score=388.37  Aligned_cols=317  Identities=29%  Similarity=0.446  Sum_probs=280.8

Q ss_pred             CCCCCcceeeeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEe
Q 019139            1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV   78 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~   78 (345)
                      |+++..|.++++|.+..++.  ++++.+++.|+|+++||+||++|+||||+|++.+.|.++..++|+++|||.+|+|+++
T Consensus         1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence            67788899999999999988  5777999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEe-cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           79 GEGVTEVQPGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        79 G~~v~~~~~Gd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      |++|++|++||||-+ ....+|.+|.||+++++++|+..... ..|.. .+|             ..++|+|++|+++++
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~-~DG-------------t~~~ggf~~~~~v~~  145 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVY-HDG-------------TITQGGFQEYAVVDE  145 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccc-cCC-------------CCccCccceeEEEee
Confidence            999999999999954 66799999999999999999964432 33433 444             777889999999999


Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHH
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK  236 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~~  236 (345)
                      .++++||++++++.||.+.|+..|.|.+| ....+.||+++.|.|+|++|++++|+||++|+ +|+++++++ +|.+..+
T Consensus       146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~  223 (360)
T KOG0023|consen  146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK  223 (360)
T ss_pred             eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence            99999999999999999999999999988 77778899999999997799999999999999 999999987 6677778


Q ss_pred             hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-cc
Q 019139          237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GR  315 (345)
Q Consensus       237 ~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  315 (345)
                      .||++.+++..+ +.++.+.+.+.+++++|-+.+.  +...+..++.+++.+ |++|++|.+..  ++.++++.++. .+
T Consensus       224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~  297 (360)
T KOG0023|consen  224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRK  297 (360)
T ss_pred             hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccE
Confidence            899999998874 2678888888888888888776  445699999999998 99999999643  88899999988 99


Q ss_pred             EEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          316 VWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       316 ~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +|.||..|++   .+.++++++..++.+
T Consensus       298 ~I~GS~vG~~---ket~E~Ldf~a~~~i  322 (360)
T KOG0023|consen  298 SIKGSIVGSR---KETQEALDFVARGLI  322 (360)
T ss_pred             EEEeeccccH---HHHHHHHHHHHcCCC
Confidence            9999999977   677777887776643

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.5e-53  Score=374.35  Aligned_cols=307  Identities=27%  Similarity=0.390  Sum_probs=272.1

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCC---CCCcccCcceeEEEEEeCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      +|+|+++.+++. +.++++|.|++ .|+||+|++.++|||++|+|++.......   +.|+++|||.+|+|+++|++|++
T Consensus         4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~   82 (354)
T KOG0024|consen    4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH   82 (354)
T ss_pred             ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence            589999999988 99999999987 99999999999999999999997654322   68999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||||++.|..+|+.|.+|++|++|+|+...+.   +....+|                  ++++|++.+++.++++|
T Consensus        83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KLP  141 (354)
T KOG0024|consen   83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKLP  141 (354)
T ss_pred             cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeCC
Confidence            99999999999999999999999999999998874   2333555                  99999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      ++++++++|.+. ++++++||. +++.++.|++|||+|+|++|+++...||++|+.+|++++..+.|+++++++|++.+.
T Consensus       142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~  219 (354)
T KOG0024|consen  142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD  219 (354)
T ss_pred             CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence            999999999887 799999987 889999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCC--ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          245 NPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       245 ~~~~~~--~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      +.....  +.+.+.+....+. .+|+.|||+|...+++.++..++.+ |++++.|..  ....+|++.+... +++++|+
T Consensus       220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~g~  296 (354)
T KOG0024|consen  220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLRGS  296 (354)
T ss_pred             eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeeeee
Confidence            665522  3334444444443 6999999999999999999999997 999999974  4578999999887 9999999


Q ss_pred             eecCCcccccHHHHHHHHhccccCC
Q 019139          321 AFGGFKSRSQVPWLVDKYMKKVNLM  345 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g~~~~  345 (345)
                      .-+   .+.+++.+++++.+|++-|
T Consensus       297 fry---~~~~y~~ai~li~sGki~~  318 (354)
T KOG0024|consen  297 FRY---CNGDYPTAIELVSSGKIDV  318 (354)
T ss_pred             eee---ccccHHHHHHHHHcCCcCc
Confidence            744   3368999999999998743

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=3.4e-50  Score=383.98  Aligned_cols=339  Identities=56%  Similarity=1.042  Sum_probs=279.9

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      .+|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus         6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740          6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence            46789999999999888999999999999999999999999999999999887642 35789999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccc--cCCCccccccCcceeeeeEEeecceEE
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS--INGKPIYHFMGTSTFSQYTVVHDVSVA  161 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~--~~~~~~~~~~~~g~~a~~~~v~~~~~~  161 (345)
                      .|++||||++.+..+|+.|.+|..++++.|.+....+..+....+|..++.  ..+..+++....|+|+||+++|.+.++
T Consensus        86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~  165 (381)
T PLN02740         86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV  165 (381)
T ss_pred             cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence            999999999999999999999999999999986532110000000100000  001122223335799999999999999


Q ss_pred             EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      ++|+++++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++
T Consensus       166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  245 (381)
T PLN02740        166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT  245 (381)
T ss_pred             ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence            99999999999999999999999887888999999999999999999999999999996799999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEee
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA  321 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  321 (345)
                      .++++.+...++.+.+.+++++++|++||++|++.++..++.++++++|+++++|.......+++++..++++++|.|+.
T Consensus       246 ~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  325 (381)
T PLN02740        246 DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSV  325 (381)
T ss_pred             EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEe
Confidence            99987653234677788777668999999999988899999999882299999998654334566666555689999998


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .+++....+++++++++.+|++
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~i  347 (381)
T PLN02740        326 FGDFKGKSQLPNLAKQCMQGVV  347 (381)
T ss_pred             cCCCCcHHHHHHHHHHHHcCCC
Confidence            8776555788999999998864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=4.3e-50  Score=381.60  Aligned_cols=333  Identities=68%  Similarity=1.173  Sum_probs=277.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++...+++++++++|.|+|.++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            88999999888899999999999999999999999999999999988776556899999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      ||++.+..+|+.|.+|+.++++.|.+.......|+. .+|..++..+|.+.++..+.|+|+||+++|.+.++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            999988899999999999999999875432222322 2221122222333333333479999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+.+|++++.++++++.++++|++.++++.+.
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~  240 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY  240 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence            99999999999999998888899999999999999999999999999999679999999999999999999999987643


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS  329 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  329 (345)
                      ..++.+.+.+++++++|++||++|++.++..+++++++++|+++.+|.......+++++..++.+..+.|+..++.....
T Consensus       241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  320 (368)
T TIGR02818       241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT  320 (368)
T ss_pred             chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence            34566777777777899999999988889999999987339999999854334566666666556678888766554456


Q ss_pred             cHHHHHHHHhcccc
Q 019139          330 QVPWLVDKYMKKVN  343 (345)
Q Consensus       330 ~~~~~~~~~~~g~~  343 (345)
                      ++.++++++++|++
T Consensus       321 ~~~~~~~~~~~g~i  334 (368)
T TIGR02818       321 ELPGIVEQYMKGEI  334 (368)
T ss_pred             HHHHHHHHHHCCCC
Confidence            88999999998864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=8.8e-50  Score=379.95  Aligned_cols=329  Identities=42%  Similarity=0.711  Sum_probs=276.5

Q ss_pred             eeeeeeccCC--------CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139           10 CKAAVAWEPN--------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus        10 ~~a~~~~~~~--------~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      |||+++.+.|        +.++++++|.|+|+++||+|||.++|||++|++.+.|.++. .+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~-~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR-PLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC-CCCccCCccceeEEEEeCCC
Confidence            7899999865        34899999999999999999999999999999999887543 47899999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA  161 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  161 (345)
                      ++.+++||+|++.+...|+.|.+|+.++++.|.+.......|.. .+|...+..++..+.+..+.|+|+||+.+|.+.++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence            99999999999888889999999999999999876432222221 11111111111111111223699999999999999


Q ss_pred             EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      ++|+++++++|+.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  238 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT  238 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999999988888899999999999999999999999999996699999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      .++++.+  .++.+.+.+++++++|++||++|++.++..++++++++ |+++.+|.......++++...++. +++|.|+
T Consensus       239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  315 (371)
T cd08281         239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS  315 (371)
T ss_pred             eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence            9998876  56777888887778999999999887899999999997 999999985433456788887777 9999999


Q ss_pred             eecCCcccccHHHHHHHHhcccc
Q 019139          321 AFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.+++...++++++++++++|++
T Consensus       316 ~~~~~~~~~~~~~~~~l~~~g~i  338 (371)
T cd08281         316 YMGSCVPRRDIPRYLALYLSGRL  338 (371)
T ss_pred             ecCCCChHHHHHHHHHHHHcCCC
Confidence            88766556789999999998875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.1e-49  Score=378.93  Aligned_cols=334  Identities=80%  Similarity=1.303  Sum_probs=282.5

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      +|||+++.+.+++++++++|.|+|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            68999999888889999999999999999999999999999999998877655789999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+..+..+|+.|.+|++++++.|.+.....+.|.. .+|..++..+|.+.++..+.|+|+||+.++.+.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            9999988899999999999999999876533223332 222222222344444444567999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +++++.+++++.|||+++.+..+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++++.++++|+++++++.+
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999999999999878889999999999999999999999999999967999999999999999999999998876


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCccc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR  328 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  328 (345)
                      .++++.+.+.+++++++|++||++|++..+..+++++++++|+++.+|....+..+++++..+..+.++.|+..+.+...
T Consensus       241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  320 (368)
T cd08300         241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR  320 (368)
T ss_pred             cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence            33357777888877799999999998777999999998733999999985433345566655555678889887777667


Q ss_pred             ccHHHHHHHHhcccc
Q 019139          329 SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 ~~~~~~~~~~~~g~~  343 (345)
                      +++.++++++++|++
T Consensus       321 ~~~~~~~~~~~~g~l  335 (368)
T cd08300         321 SQVPKLVEDYMKGKI  335 (368)
T ss_pred             HHHHHHHHHHHcCCC
Confidence            889999999998864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9.9e-50  Score=379.34  Aligned_cols=336  Identities=67%  Similarity=1.169  Sum_probs=281.8

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ++|||+++.+++++++++++|.|+|+++||+||+.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (369)
T cd08301           1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP   80 (369)
T ss_pred             CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence            37999999998888999999999999999999999999999999999887765578999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||||+..+...|+.|.+|+.++++.|.+.......|....++..++...|...+++...|+|+||+++|.+.++++|+++
T Consensus        81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            99999999999999999999999999986432222222111111111223333444445799999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~  240 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK  240 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence            99999999999999999888888999999999999999999999999999986799999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS  327 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  327 (345)
                      +....+.+.+++++++++|++||++|+...+..+++++++++|+++++|.......+++++..++++++|.|++.+++..
T Consensus       241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  320 (369)
T cd08301         241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP  320 (369)
T ss_pred             ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence            53235666777777668999999999887789999999992299999998654345667766555699999998877765


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      +.+++++++++++|+.
T Consensus       321 ~~~~~~~~~~~~~g~~  336 (369)
T cd08301         321 KTDLPNLVEKYMKKEL  336 (369)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            6788999999988864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.3e-48  Score=368.45  Aligned_cols=322  Identities=36%  Similarity=0.588  Sum_probs=273.5

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      +|||+++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|++++.|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            599999999998899999999999999999999999999999999988654 2478999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|++.+...|+.|.+|.++++++|...... .......+|        .......+.|+|+||+.+|.+.++++|++++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~  150 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD  150 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence            9999999999999999999999999854321 000000001        0000001236999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +++|+.+++++.++|+++.+..+++++++|+|+|+|++|++++|+|+++|+++|++++++++++++++++|++.++++.+
T Consensus       151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~  230 (358)
T TIGR03451       151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG  230 (358)
T ss_pred             hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence            99999999999999988878888999999999999999999999999999966999999999999999999999998876


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                        .++.+.+.+++++ ++|++||++|++.++..++++++++ |+++.+|.......+++++..++. ++++.+++.+...
T Consensus       231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  307 (358)
T TIGR03451       231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL  307 (358)
T ss_pred             --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence              5677788888877 8999999999877799999999997 999999985433356778777777 9999999765443


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                      ..++++++++++++|++
T Consensus       308 ~~~~~~~~~~l~~~g~l  324 (358)
T TIGR03451       308 PERDFPMLVDLYLQGRL  324 (358)
T ss_pred             cHHHHHHHHHHHHcCCC
Confidence            45778999999998874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.5e-48  Score=367.41  Aligned_cols=332  Identities=65%  Similarity=1.124  Sum_probs=280.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ++|||+++.+.+++++++++|.|+|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            4689999998888899999999999999999999999999999999988765 457899999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+..+...|++|.+|..++++.|.+.... ..|.. .++...+...|...+++.+.|+|+||++++.+.++++|+++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            99999988899999999999999999986543 22332 33322222233333333445799999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++++.+++++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.+++..
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~  237 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK  237 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence            99999999999999999887888999999999999999999999999999996799999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS  327 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  327 (345)
                      +...++.+.+.+++++++|++||++|+...+..+++++++++|+++.+|... +...++++..++.+++|.|++++++..
T Consensus       238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~  316 (365)
T cd08277         238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKS  316 (365)
T ss_pred             cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCCh
Confidence            5333456677777767899999999987778999999987239999999853 334567776766699999999887755


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      ..++.+++++++++++
T Consensus       317 ~~~~~~~~~~~~~~~~  332 (365)
T cd08277         317 RSDVPKLVSKYMNKKF  332 (365)
T ss_pred             HHHHHHHHHHHHCCCc
Confidence            6788999999988753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.5e-47  Score=365.22  Aligned_cols=330  Identities=54%  Similarity=1.012  Sum_probs=268.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ..|||+++.++++.++++++|.|+|+++||+|||.++|||++|++.+.+..   .+|.++|||++|+|+++|+++++|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            679999999888779999999999999999999999999999999887642   36789999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+..+..+|+.|.+|++++++.|.+.... ..|....+....+...|...++....|+|+||+.+|.+.++++|+++
T Consensus        88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            99999998899999999999999999874321 11111000000000011111111123699999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++++.+.+++.++|+++.+..++++|++|+|+|+|++|++++|+|+++|+..|+++++++++.++++++|++.+++++
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~  246 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN  246 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence            99999999889899998887778899999999999999999999999999996688888899999999999999999876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh-hhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~i~g~~~~~~  325 (345)
                      +.+.++.+.+.+++++++|++||++|....+..+++.+++++|+++.+|....  ...+++ ..++. +++|.|+..+.+
T Consensus       247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~--~~~~~~~~~~~~~~~~i~g~~~~~~  324 (378)
T PLN02827        247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA--KPEVSAHYGLFLSGRTLKGSLFGGW  324 (378)
T ss_pred             ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC--CccccccHHHHhcCceEEeeecCCC
Confidence            53245667777777668999999999877789999999993299999998543  234433 23444 999999988766


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                      ....++.++++++++|++
T Consensus       325 ~~~~~~~~~~~~~~~g~i  342 (378)
T PLN02827        325 KPKSDLPSLVDKYMNKEI  342 (378)
T ss_pred             chhhhHHHHHHHHHcCCC
Confidence            556788899999998875

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.1e-46  Score=354.24  Aligned_cols=302  Identities=28%  Similarity=0.437  Sum_probs=259.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+.+.. ...|.++|||++|+|+++|++++.+++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            78999998765 999999999999999999999999999999988776432 2357999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+..+...|+.|.+|+.++++.|.+...  ..|.. .+                  |+|+||+.+|.+.++++|++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~  138 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS  138 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence            999999999999999999999999987543  12322 23                  4999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +++|+.+++++.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.++++++
T Consensus       139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~  217 (339)
T cd08239         139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ  217 (339)
T ss_pred             HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence            999999999999999987 5677899999999999999999999999999954999999999999999999999998876


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                        .+ .+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|... ...+.. ...++. +++|.|++.++. 
T Consensus       218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~-~~~~~~~~~~i~g~~~~~~-  290 (339)
T cd08239         218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-ELTIEV-SNDLIRKQRTLIGSWYFSV-  290 (339)
T ss_pred             --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-CcccCc-HHHHHhCCCEEEEEecCCH-
Confidence              34 5667777777 8999999999988778999999997 9999999754 223222 234555 999999986543 


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                        +++.++++++++|++
T Consensus       291 --~~~~~~~~~~~~g~i  305 (339)
T cd08239         291 --PDMEECAEFLARHKL  305 (339)
T ss_pred             --HHHHHHHHHHHcCCC
Confidence              678999999998864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.3e-46  Score=354.31  Aligned_cols=309  Identities=28%  Similarity=0.382  Sum_probs=253.2

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCc-ccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |+++++..++...++++.+.|.+.|+||+|||.++|||++|++.++|..+....|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            56777777765455788877778999999999999999999999999877666666 99999999999999 77889999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceec-CCcccccccCCCccccccCcceeeeeEEeecceEEE-cCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM-NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-iP~~  166 (345)
                      |||++.+..+|+.|.+|+++.++.|.+........... .+                  |+|+||+++|.++++. +|++
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~------------------G~~aEyv~vp~~~~~~~~pd~  141 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID------------------GGFAEYVRVPADFNLAKLPDG  141 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCC------------------CceEEEEEeccccCeecCCCC
Confidence            99999999999999999999999999554321111110 23                  4999999999755555 5888


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~  245 (345)
                      + +.+++++..++++++++........++++|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.+++
T Consensus       142 ~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~  220 (350)
T COG1063         142 I-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN  220 (350)
T ss_pred             C-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeec
Confidence            8 556666666999998875455556666699999999999999999999999999999999999999998 66666666


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ..+  ++....+.+.+++ ++|++|||+|.+.++.++++.++++ |+++++|.+..... .++...++. ++++.|+...
T Consensus       221 ~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~  296 (350)
T COG1063         221 PSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP  296 (350)
T ss_pred             Ccc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC
Confidence            554  2566778888888 9999999999999999999999997 99999999754332 677777777 9999999531


Q ss_pred             CCcccccHHHHHHHHhccccC
Q 019139          324 GFKSRSQVPWLVDKYMKKVNL  344 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~~  344 (345)
                        ....+++.+++++++|+..
T Consensus       297 --~~~~~~~~~~~ll~~g~i~  315 (350)
T COG1063         297 --SGREDFERALDLLASGKID  315 (350)
T ss_pred             --CCcccHHHHHHHHHcCCCC
Confidence              2336899999999999763

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.6e-46  Score=349.43  Aligned_cols=283  Identities=27%  Similarity=0.385  Sum_probs=246.5

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+.+.+  ++++++|.|+|++|||||||.++|||+.|.+.+.|.. +..++|+++|.|++|+|+++|++|+.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            789999987765  8899999999999999999999999999999999973 3447899999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+ ..|                           .                  .|+|+||+.+|++.++++|++
T Consensus        81 ~GdrV~~~~-~~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~  114 (326)
T COG0604          81 VGDRVAALG-GVG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG  114 (326)
T ss_pred             CCCEEEEcc-CCC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence            999998542 000                           1                  249999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +|+++||++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ .++++++++++.++++++|++++++
T Consensus       115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN  193 (326)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999999899999999999987 9999999999999998 6777777777777999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +.+  .++.+.+++++++ ++|+|||++|+.. +..++..|+++ |+++.+|..++...+.++...++. .+++.|+...
T Consensus       194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~  269 (326)
T COG0604         194 YRE--EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG  269 (326)
T ss_pred             CCc--ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence            987  6699999999999 9999999999966 88899999998 999999986534566777777766 8899998876


Q ss_pred             CC--cc-cccHHHHHHHHhcccc
Q 019139          324 GF--KS-RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~--~~-~~~~~~~~~~~~~g~~  343 (345)
                      ..  .. .+.+.++.+++++|++
T Consensus       270 ~~~~~~~~~~~~~l~~~~~~g~l  292 (326)
T COG0604         270 SRDPEALAEALAELFDLLASGKL  292 (326)
T ss_pred             ecchHHHHHHHHHHHHHHHcCCC
Confidence            44  11 2445667888888764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.8e-45  Score=348.78  Aligned_cols=307  Identities=23%  Similarity=0.342  Sum_probs=255.5

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      .-|+++.++.+.+...++++.+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++++.
T Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~   87 (360)
T PLN02586          8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK   87 (360)
T ss_pred             hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence            45677888888877777999999999999999999999999999999999887654467899999999999999999999


Q ss_pred             CCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCC-C---CceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGAT-G---AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      |++||+|++.+. .+|+.|.+|+.++++.|++..... .   .|.. .+                  |+|+||+++|.+.
T Consensus        88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~  148 (360)
T PLN02586         88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHF  148 (360)
T ss_pred             cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHH
Confidence            999999986544 589999999999999999754310 0   0111 12                  4999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhc
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNF  238 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~  238 (345)
                      ++++|+++++++++.+++++.|+|+++......++|++|+|.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus       149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~  227 (360)
T PLN02586        149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL  227 (360)
T ss_pred             eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence            999999999999999999999999988666667899999999999999999999999999 77777666554 4566889


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW  317 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  317 (345)
                      |++.+++..+  .   +.+.+.++ ++|++||++|+..++..++++++++ |+++.+|...  ...++++..++. ++++
T Consensus       228 Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i  298 (360)
T PLN02586        228 GADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKLV  298 (360)
T ss_pred             CCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeEE
Confidence            9999988654  1   23444443 6999999999877799999999997 9999999753  245677777776 8888


Q ss_pred             EEeeecCCcccccHHHHHHHHhcccc
Q 019139          318 KGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       318 ~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .|+..++.   .+++++++++++|++
T Consensus       299 ~g~~~~~~---~~~~~~~~li~~g~i  321 (360)
T PLN02586        299 GGSDIGGI---KETQEMLDFCAKHNI  321 (360)
T ss_pred             EEcCcCCH---HHHHHHHHHHHhCCC
Confidence            89876543   678999999998875

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-45  Score=346.32  Aligned_cols=302  Identities=22%  Similarity=0.319  Sum_probs=249.6

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-CCCC--CCCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ..+||++++++++ ++++++|.| +.++||||||.++|||++|++++. |..+  ..++|.++|||++|+|+++  ++++
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            4689999998888 999999997 689999999999999999999875 4332  2357999999999999999  6789


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||+|+..+..+|+.|.+|+.++++.|++...   .|....              +....|+|+||++++++.++++|
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~--------------~~~~~G~~aey~~v~~~~~~~~P  141 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMY--------------FPHVDGGFTRYKVVDTAQCIPYP  141 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccc--------------cCCCCCceeeeEEechHHeEECC
Confidence            9999999999999999999999999999987543   221100              00012599999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++++ +..++++||+++ ......++++|+|+|+|++|++++|+|+++|+++|++++++++++++++++|++.++
T Consensus       142 ~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi  219 (343)
T PRK09880        142 EKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV  219 (343)
T ss_pred             CCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence            999987665 445788999987 444566899999999999999999999999997799999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ++++  .++.+.. +. .+++|++||++|++.++..++++++++ |+++.+|...  ...++++..++. ++++.|+...
T Consensus       220 ~~~~--~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~  292 (343)
T PRK09880        220 NPQN--DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEISLKGSFRF  292 (343)
T ss_pred             cCCc--ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcEEEEEeec
Confidence            8876  3443322 22 236999999999987799999999998 9999999743  245677777776 9999998642


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                          .+++.++++++++|++
T Consensus       293 ----~~~~~~~~~l~~~g~i  308 (343)
T PRK09880        293 ----TEEFNTAVSWLANGVI  308 (343)
T ss_pred             ----cccHHHHHHHHHcCCC
Confidence                3678999999998864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=8.1e-45  Score=347.48  Aligned_cols=311  Identities=25%  Similarity=0.365  Sum_probs=245.3

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      -|||+++.++++ ++++++|.|+|+       +|||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            489999999886 999999999874       68999999999999999999988653 246899999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCC---CCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      |++|++||||++.+...|+.|.+|++++++.|.+.....   ..|.... |              ...|+|+||+++|..
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~  144 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA  144 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence            999999999999999999999999999999999743210   0111000 0              012599999999964


Q ss_pred             --eEEEcCCCCCh----hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       159 --~~~~iP~~l~~----~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                        .++++|++++.    .+++++..++.++|+++ ...+++++++|+|.|+|++|++++|+|+.+|++.|++++.+++|+
T Consensus       145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence              79999998753    34667777899999987 457889999999998899999999999999996677677888999


Q ss_pred             HHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhccCCeEEEEecc
Q 019139          233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       233 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ++++++|++. ++... ..++.+.+.+++++ ++|++||++|.+              .++++++++++++ |+++.+|.
T Consensus       224 ~~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~  300 (393)
T TIGR02819       224 AQARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL  300 (393)
T ss_pred             HHHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence            9999999974 54432 13566777777777 899999999985              4799999999998 99999998


Q ss_pred             CCCCC-----------ceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          298 AASGQ-----------EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       298 ~~~~~-----------~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +..+.           .+++....++. ++++.|+.   ....+...++++++++|++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i  355 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRV  355 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCC
Confidence            63211           22333444444 67777632   1111334678899988874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=5.2e-44  Score=340.39  Aligned_cols=332  Identities=59%  Similarity=0.989  Sum_probs=273.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      .+|||+++..++++++++++|.|+|.++||+||+.++++|++|.+.+.|.++ ..+|.++|||++|+|+++|++++.+++
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   84 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP   84 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence            4699999999888899999999999999999999999999999999988763 346889999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|++.+..+|++|.+|++++++.|+........|.. .++..++..+|.+..++.+.|+|+||++++.+.++++|+++
T Consensus        85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            99999988899999999999999999865432112222 22322333344444444456899999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++.+++.+++++.+||+++....+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++.+++..
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~  243 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ  243 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence            99999999999999999888888999999999998899999999999999986799999999999999999999999876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  326 (345)
                      +...++.+.+.+++.+++|+++|++|++..+..++..+ +++ |+++.+|.......+++++..+..++++.|++.+.+.
T Consensus       244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  322 (373)
T cd08299         244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK  322 (373)
T ss_pred             ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence            53234666777776668999999999877678877765 576 9999999854333566666544458899999887765


Q ss_pred             ccccHHHHHHHHhccc
Q 019139          327 SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~  342 (345)
                      ...++.++++.+.++.
T Consensus       323 ~~~~~~~~~~~~~~~~  338 (373)
T cd08299         323 SKDSVPKLVADYMAKK  338 (373)
T ss_pred             cHHHHHHHHHHHHcCC
Confidence            5567777777766553

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.8e-44  Score=341.49  Aligned_cols=300  Identities=24%  Similarity=0.323  Sum_probs=239.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++...+.+++++++|.|+|+++||||||.|+|||++|++.++|.++.   ..+|.++|||++|+|+++|++ +.|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            688998865545999999999999999999999999999999999987532   246899999999999999999 9999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+...|+.|.+|+.++++.|...... ..|....+                  |+|+||+.+|++.++++|++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~  140 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS  140 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence            999999988889999999999999999865421 12221122                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHh
Q 019139          167 APLDKVCLLGCGVPTGLGAVWN------TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN  237 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~------~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~---~~~~~~~~~~  237 (345)
                      ++  +++++..+++++++++..      ....+++++|+|+|+|++|++++|+||.+|+ +|+++++   ++++++++++
T Consensus       141 ~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~  217 (355)
T cd08230         141 LA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE  217 (355)
T ss_pred             CC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence            98  444444566665554322      2235789999999999999999999999999 7998887   6789999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecC----hhhhcc
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQLVT  313 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~----~~~~~~  313 (345)
                      +|++. +++.+  .++.+ . . ..+++|++||++|++..+..+++.++++ |+++++|...+...++++    ...++.
T Consensus       218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~  290 (355)
T cd08230         218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL  290 (355)
T ss_pred             cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence            99986 56554  23332 1 1 2248999999999877799999999998 999999986542355565    345555


Q ss_pred             -ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          314 -GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       314 -~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                       +++|.|+..++.   ++++++++++.+++
T Consensus       291 k~~~i~g~~~~~~---~~~~~~~~~l~~~~  317 (355)
T cd08230         291 GNKALVGSVNANK---RHFEQAVEDLAQWK  317 (355)
T ss_pred             cCcEEEEecCCch---hhHHHHHHHHHhcc
Confidence             999999876543   67888888887765

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.1e-44  Score=339.67  Aligned_cols=300  Identities=24%  Similarity=0.329  Sum_probs=248.5

Q ss_pred             eeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139           12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV   91 (345)
Q Consensus        12 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V   91 (345)
                      +++..+.+.++++.+++.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||+|
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            45555555568889999999999999999999999999999998876444578999999999999999999999999999


Q ss_pred             EecCcC-CCCCCccccCCCCCCCCCcCCCC----CCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           92 IPCYQA-ECRECKFCKSGKTNLCGKVRGAT----GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        92 ~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      ++.+.. +|+.|.+|++++++.|++.....    ..|.. .+                  |+|+||+++|++.++++|++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~~~lP~~  149 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-NQ------------------GGYSDVIVVDHRFVLSIPDG  149 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-CC------------------CccccEEEEchHHeEECCCC
Confidence            866554 69999999999999999764310    01111 12                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEe
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFV  244 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i  244 (345)
                      ++++++++++++..|+|+++..... .+++++|+|.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|++.++
T Consensus       150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i  228 (375)
T PLN02178        150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL  228 (375)
T ss_pred             CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence            9999999999999999998754433 3689999999999999999999999999 7888877654 47788899999998


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ++.+  .   +.+.+.++ ++|++||++|.+.++..++++++++ |+++.+|...  .+.++++..++. +++|.|+..+
T Consensus       229 ~~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~  299 (375)
T PLN02178        229 VTTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIG  299 (375)
T ss_pred             cCcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCcc
Confidence            8654  1   34444443 7999999999987789999999997 9999999753  346677777776 9999999865


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.   +++.++++++++|++
T Consensus       300 ~~---~~~~~~~~l~~~g~i  316 (375)
T PLN02178        300 GM---KETQEMLEFCAKHKI  316 (375)
T ss_pred             CH---HHHHHHHHHHHhCCC
Confidence            43   678899999999875

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-43  Score=335.63  Aligned_cols=315  Identities=22%  Similarity=0.282  Sum_probs=259.7

Q ss_pred             CCCCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCC
Q 019139            1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      |.+-....+++|+++..+++++++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~   80 (357)
T PLN02514          1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS   80 (357)
T ss_pred             CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence            44445566799999999999999999999999999999999999999999999988765446789999999999999999


Q ss_pred             CCCCCCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      +++.|++||+|++.+. .+|+.|.+|++++++.|.+..+....+.  ..|             ....|+|+||+++|.+.
T Consensus        81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~  145 (357)
T PLN02514         81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF  145 (357)
T ss_pred             CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence            9999999999986554 4799999999999999987532100000  001             11235999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF  238 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~  238 (345)
                      ++++|+++++++++.+++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+ ++++++.++++++.+ +++
T Consensus       146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~  224 (357)
T PLN02514        146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL  224 (357)
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence            999999999999999999999999988666667899999999889999999999999999 788777777666544 679


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW  317 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  317 (345)
                      |++.+++..+  .   +.+.+.+. ++|++||++|...++..++++++++ |+++.+|...  ...++++..++. ++++
T Consensus       225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i  295 (357)
T PLN02514        225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVI  295 (357)
T ss_pred             CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEE
Confidence            9988877643  1   23444443 7999999999877799999999997 9999999853  245677777776 9999


Q ss_pred             EEeeecCCcccccHHHHHHHHhcccc
Q 019139          318 KGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       318 ~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .|++.++.   .+++++++++++|+.
T Consensus       296 ~g~~~~~~---~~~~~~~~~~~~g~l  318 (357)
T PLN02514        296 TGSFIGSM---KETEEMLEFCKEKGL  318 (357)
T ss_pred             EEEecCCH---HHHHHHHHHHHhCCC
Confidence            99987643   678999999998863

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=9.4e-44  Score=335.82  Aligned_cols=300  Identities=30%  Similarity=0.448  Sum_probs=257.0

Q ss_pred             eeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139           13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV   91 (345)
Q Consensus        13 ~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V   91 (345)
                      +++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            567778877999999999999999999999999999999887443 3333578999999999999999999877 99999


Q ss_pred             EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC------
Q 019139           92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------  165 (345)
Q Consensus        92 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~------  165 (345)
                      ++.+..+|+.|.+|++++++.|.+...   .|.. .+                  |+|+||+.+|.+.++++|+      
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~  138 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA  138 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence            999999999999999999999987543   2221 22                  4999999999999999999      


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++++++++.+.+++.++|+++. ...++++++|+|+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+++
T Consensus       139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence            8999999999999999999874 5788999999999999999999999999999 7999999999999999999999988


Q ss_pred             CCCCC-ccHHHHHHhhcCC-Ccc----EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139          246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK  318 (345)
Q Consensus       246 ~~~~~-~~~~~~~~~~~~g-g~d----~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  318 (345)
                      +.+.+ .++.+.+.+++++ ++|    ++||++|+..++..++++++++ |+++.+|....  ..++++..++. ++++.
T Consensus       217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~  293 (349)
T TIGR03201       217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL  293 (349)
T ss_pred             CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence            76522 2566777778876 776    8999999988888999999998 99999998643  35667777776 89999


Q ss_pred             EeeecCCcccccHHHHHHHHhcccc
Q 019139          319 GTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       319 g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |++.++   ..+++++++++++|++
T Consensus       294 g~~~~~---~~~~~~~~~~i~~g~i  315 (349)
T TIGR03201       294 GNWGCP---PDRYPAALDLVLDGKI  315 (349)
T ss_pred             EEecCC---HHHHHHHHHHHHcCCC
Confidence            987543   3678999999999875

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.2e-43  Score=333.37  Aligned_cols=331  Identities=58%  Similarity=1.012  Sum_probs=286.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      +||+++.+.++++++++.|.|++.++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            47889998887799999999999999999999999999999999888654 34678999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+..+..+|+.|.+|+.++++.|+....+...|.. .+|...+.-+|.+.+|+++.|+|++|+.++.+.++++|+++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~  158 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL  158 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence            999988899999999999999999887765445544 5566666667777777777889999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+.+++.+||+++.+...++++++|+|+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++++++..+.
T Consensus       159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~  238 (365)
T cd05279         159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ  238 (365)
T ss_pred             HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence            99999999999999998888899999999999889999999999999999668888889999999999999999887763


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc-cCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR  328 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  328 (345)
                      +.++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|++++++...
T Consensus       239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  317 (365)
T cd05279         239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK  317 (365)
T ss_pred             cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence            2266777777775699999999998777999999999 97 999999975323467788877734889999988877777


Q ss_pred             ccHHHHHHHHhcccc
Q 019139          329 SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 ~~~~~~~~~~~~g~~  343 (345)
                      +.+.++++++++++.
T Consensus       318 ~~~~~~~~l~~~~~l  332 (365)
T cd05279         318 DSVPKLVALYRQKKF  332 (365)
T ss_pred             hHHHHHHHHHHcCCc
Confidence            888999998887753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.3e-43  Score=330.43  Aligned_cols=292  Identities=22%  Similarity=0.291  Sum_probs=247.1

Q ss_pred             eeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           12 AAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        12 a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |+.+.+++.    .++++++|.|+|+++||+|||.++|||++|++.+.|.++....|.++|||++|+|+++|++++++++
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence            345555553    4889999999999999999999999999999999887654445789999999999999999999999


Q ss_pred             CCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        88 Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      ||+|++.+. ..|+.|.+|++++++.|+....   .|.. .+                  |+|+||+.+|.+.++++|++
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~  138 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTG  138 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCC
Confidence            999987654 5799999999999999987643   2322 23                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++++.+++++.|||+++ ...++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++++.
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~  216 (329)
T TIGR02822       139 YDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGA  216 (329)
T ss_pred             CCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccc
Confidence            99999999999999999988 46789999999999999999999999999999 79999999999999999999998875


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      .+.  .         .+++|+++++.+...++..++++++++ |+++.+|.... ....+++..++. ++++.|+.... 
T Consensus       217 ~~~--~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~-  282 (329)
T TIGR02822       217 YDT--P---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLT-DTPPLNYQRHLFYERQIRSVTSNT-  282 (329)
T ss_pred             ccc--C---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCc-cCCCCCHHHHhhCCcEEEEeecCC-
Confidence            431  1         126899999888778899999999997 99999997432 233566666665 99999987542 


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                        +.++.++++++++|++
T Consensus       283 --~~~~~~~~~l~~~g~i  298 (329)
T TIGR02822       283 --RADAREFLELAAQHGV  298 (329)
T ss_pred             --HHHHHHHHHHHHhCCC
Confidence              3678888999988864

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-43  Score=329.49  Aligned_cols=302  Identities=23%  Similarity=0.328  Sum_probs=249.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++++++. ++++++|.|+| .++||+|||.++++|++|...+.+.. ...+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            78999998876 99999999997 59999999999999999987532211 11357899999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|++.+..+|+.|.+|+.+.++.|.+...   .|.. .+                  |+|+||+.+|.+.++++|++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s  136 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP  136 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence            999999999999999999999999986432   2221 22                  4999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +++++.+. +++++++++ +...++++++|+|+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++
T Consensus       137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  214 (347)
T PRK10309        137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE  214 (347)
T ss_pred             HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence            99998774 556678874 6678899999999999999999999999999955889999999999999999999998765


Q ss_pred             CCccHHHHHHhhcCC-Ccc-EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh---hhhcc-ccEEEEeee
Q 019139          249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP---FQLVT-GRVWKGTAF  322 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~---~~~~~-~~~i~g~~~  322 (345)
                        .+ .+.+.+++.+ ++| ++|||+|...++..++++++++ |+++.+|....  ..++++   ..++. +++|.|++.
T Consensus       215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~~i~g~~~  288 (347)
T PRK10309        215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH--DLHLTSATFGKILRKELTVIGSWM  288 (347)
T ss_pred             --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CcccChhhhhHHhhcCcEEEEEec
Confidence              23 3456666665 888 9999999988899999999997 99999998643  233332   24555 999999987


Q ss_pred             cCCc--ccccHHHHHHHHhcccc
Q 019139          323 GGFK--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~--~~~~~~~~~~~~~~g~~  343 (345)
                      +...  ..+++.++++++++|+.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~g~i  311 (347)
T PRK10309        289 NYSSPWPGQEWETASRLLTERKL  311 (347)
T ss_pred             cccCCcchhHHHHHHHHHHcCCC
Confidence            5322  23678899999998864

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=2.2e-42  Score=326.66  Aligned_cols=302  Identities=30%  Similarity=0.476  Sum_probs=260.4

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CC--------CCCCcccCcceeEEEEEe
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PE--------GLFPCILGHEAAGIVESV   78 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~--------~~~p~~~G~e~~G~Vv~~   78 (345)
                      |||+++.++++ ++++++|.|+|.++||+||+.++++|++|++.+.+..   +.        ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            78999998776 9999999999999999999999999999987665321   10        136889999999999999


Q ss_pred             CCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      |++++.+++||+|+..+...|+.|.+|+.+.++.|.+...   .|+...+                  |+|++|+.++.+
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~a~~~~~~~~  138 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG------------------GGFAEYVVVPAY  138 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC------------------CceeeEEEechH
Confidence            9999999999999999889999999999999999985432   1111012                  499999999999


Q ss_pred             eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       159 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      .++++|+++++++++.+ .++.+||+++ ...+++++++|+|+|+|++|++++|+|+.+|+++|+++++++++.++++++
T Consensus       139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~  216 (351)
T cd08233         139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL  216 (351)
T ss_pred             HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence            99999999999998776 5788999988 778899999999999999999999999999997789999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      |++.++++++  .++.+.+.+.+++ ++|++||++|+..++..++++++++ |+++.+|...  ...++++..++. +++
T Consensus       217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~  291 (351)
T cd08233         217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT  291 (351)
T ss_pred             CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence            9999999876  5677888888877 7999999999877799999999997 9999999864  356778877777 999


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |.|++.+.   .+++.++++++++|++
T Consensus       292 i~g~~~~~---~~~~~~~~~~~~~g~l  315 (351)
T cd08233         292 LTGSICYT---REDFEEVIDLLASGKI  315 (351)
T ss_pred             EEEEeccC---cchHHHHHHHHHcCCC
Confidence            99997553   3789999999998864

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.2e-41  Score=323.42  Aligned_cols=330  Identities=38%  Similarity=0.683  Sum_probs=269.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |+|||+++.+++.++++++.+.|++.++||+||+.++++|++|++...|.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4799999999877799999999999999999999999999999999988765 346889999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccc-cCCCcc-ccccCcceeeeeEEeecceEEEcCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ||+|++.+. .|+.|.+|+.++.++|.+.......|.. .+|-.-+. .++.+. .++.+.|+|++|++++.+.++++|+
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            999998764 8999999999999999865532222221 11100000 000010 0133457999999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++++.+++.+++++.+|+.++.....++++++|+|+|+|++|++++|+|+++|++.++++++++++.++++++|++.+++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~  237 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN  237 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence            99999999999999999998888888999999999988999999999999999977999999999999999999999988


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      +.+  .++.+.+.++++.++|+++|++|+...+..++++++++ |+++.+|.........+++..++. ++++.++..+.
T Consensus       238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (365)
T cd08278         238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD  314 (365)
T ss_pred             CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence            766  46667777777449999999999877799999999998 999999975333345677777645 99999887654


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                      ....+.+.+++++++++++
T Consensus       315 ~~~~~~~~~~~~~l~~g~l  333 (365)
T cd08278         315 SVPQEFIPRLIELYRQGKF  333 (365)
T ss_pred             cChHHHHHHHHHHHHcCCC
Confidence            4334566788888887753

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.1e-41  Score=323.06  Aligned_cols=312  Identities=28%  Similarity=0.425  Sum_probs=261.7

Q ss_pred             eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC------
Q 019139           11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------   84 (345)
Q Consensus        11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~------   84 (345)
                      ||+++.++++.+++++++.|+|+++||+|||.++++|++|+....|.++...+|.++|||++|+|+++|++++.      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            78999998877999999999999999999999999999999999887653457889999999999999999986      


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc-eEEEc
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI  163 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~i  163 (345)
                      |++||+|+..+..+|+.|.+|+.+.++.|......   |.....+       .     ....|+|+||+.++.+ .++++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~l  146 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVRV  146 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc-------C-----CCCCcccceEEEecCCCceEEC
Confidence            99999999999999999999999999999876532   2211100       0     0012599999999986 79999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      |++++..+++.+++++.|||+++......+++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus       147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v  226 (361)
T cd08231         147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT  226 (361)
T ss_pred             CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence            99999999999889999999998776666799999999989999999999999999779999999999999999999998


Q ss_pred             eCCCCCC-ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       244 i~~~~~~-~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      +++++.. .++...+.+.+++ ++|++||++|+...+..++++++++ |+++.+|........++++..++. ++++.++
T Consensus       227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  305 (361)
T cd08231         227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV  305 (361)
T ss_pred             EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence            8876521 1233467777776 8999999999877789999999997 999999975433455677666666 9999999


Q ss_pred             eecCCcccccHHHHHHHHhcc
Q 019139          321 AFGGFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g  341 (345)
                      +.++.   +++.++++++.++
T Consensus       306 ~~~~~---~~~~~~~~~~~~~  323 (361)
T cd08231         306 HNYDP---SHLYRAVRFLERT  323 (361)
T ss_pred             ccCCc---hhHHHHHHHHHhc
Confidence            76533   5678888888776

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.8e-41  Score=316.95  Aligned_cols=308  Identities=25%  Similarity=0.343  Sum_probs=258.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++. +++++++.|.+.++||+|||.++++|++|++.+.+.++....|.++|||++|+|+++|++++++++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            78999999886 89999999999999999999999999999998887765556689999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCCC
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA  167 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l  167 (345)
                      +|+..+..+|+.|.+|..++.+.|.+.......+.. .                  .|+|+||+.++.+  .++++|+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~-~------------------~g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNF-K------------------DGVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCC-C------------------CcceeEEEEcchhhCceEECCCCC
Confidence            999988789999999999999999875321111110 1                  2499999999974  899999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++.+++.++.++.|||+++ ....++++++|+|+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.
T Consensus       141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  219 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK  219 (351)
T ss_pred             CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence            9999999988999999985 778899999999998899999999999999996789999999999999999999999887


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hcc-ccEEEEeeec
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LVT-GRVWKGTAFG  323 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~~-~~~i~g~~~~  323 (345)
                      +  .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|.......++++...  ... .+++.+....
T Consensus       220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (351)
T cd08285         220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP  296 (351)
T ss_pred             C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence            6  4667777777766 8999999999877789999999997 999999986543344555322  223 6677765432


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .  ..++++++++++++|++
T Consensus       297 ~--~~~~~~~~~~~~~~g~i  314 (351)
T cd08285         297 G--GRLRMERLASLIEYGRV  314 (351)
T ss_pred             C--ccccHHHHHHHHHcCCC
Confidence            1  23678999999998874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.1e-41  Score=320.56  Aligned_cols=284  Identities=17%  Similarity=0.230  Sum_probs=229.4

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccCcceeEEEEEeCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      .-+++++.++++ ++++++|.|. +++||||||.++|||++|++++.|.++.    ..+|.++|||++|+|+++|.+  .
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            467899999986 9999999995 9999999999999999999999987532    257999999999999998764  7


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||++.+...|+ |.+|.  ..+.|.+...   .|.. .+|                  +|+||+++|++.++++|
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~vP  132 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YDG------------------FMQDYVFLPPDRLVKLP  132 (341)
T ss_pred             cCCCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CCC------------------ceEEEEEEchHHeEECC
Confidence            9999999998887777 44563  5677876532   1221 233                  99999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHh--hcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +++++++||.+. +++++|+++..  ...+++|++|+|+|+|++|++++|+|+. +|..+|++++++++|++++++++++
T Consensus       133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~  211 (341)
T cd08237         133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET  211 (341)
T ss_pred             CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence            999998877554 88899998754  3456889999999999999999999996 6655899999999999999886654


Q ss_pred             eEeCCCCCCccHHHHHHhhcCC-CccEEEEccC---CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      ..++      +       .... ++|++||++|   .+.++..++++++++ |+++++|...  .+.++++..++. +++
T Consensus       212 ~~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~  275 (341)
T cd08237         212 YLID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGLT  275 (341)
T ss_pred             eehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCceE
Confidence            3221      1       1112 6999999999   456789999999997 9999999753  346677777776 999


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g  341 (345)
                      |.|+..++   .++++++++++++|
T Consensus       276 i~g~~~~~---~~~~~~~~~~~~~~  297 (341)
T cd08237         276 LVGSSRST---REDFERAVELLSRN  297 (341)
T ss_pred             EEEecccC---HHHHHHHHHHHHhC
Confidence            99987543   36789999999987

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.5e-42  Score=294.82  Aligned_cols=283  Identities=26%  Similarity=0.296  Sum_probs=241.1

Q ss_pred             CcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      ++|+..|-+++++-|..  +++++.|.|+|.|||++||..|+|+|+.|.++++|.+.+.+.|++||.|++|+|+++|++|
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv   83 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV   83 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence            46777899999988765  8899999999999999999999999999999999999877899999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      +++++||||...-                               .                  .|.|+|++.+|...+++
T Consensus        84 tdrkvGDrVayl~-------------------------------~------------------~g~yaee~~vP~~kv~~  114 (336)
T KOG1197|consen   84 TDRKVGDRVAYLN-------------------------------P------------------FGAYAEEVTVPSVKVFK  114 (336)
T ss_pred             cccccccEEEEec-------------------------------c------------------chhhheeccccceeecc
Confidence            9999999997321                               1                  14999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +|+.+++.+||++.+.++|||.-+.+...+++|++|||+.+ |++|++++|++++.|+ .+|++.++.+|++.+++.|++
T Consensus       115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~  193 (336)
T KOG1197|consen  115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE  193 (336)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence            99999999999999999999998888999999999999976 9999999999999999 899999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE-E
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW-K  318 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i-~  318 (345)
                      +.|+++.  +|+.+.+.++++| |+|+++|.+|... +...+.+|++. |.+|.+|..+ +..-++++..|-- .+++ +
T Consensus       194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvr  268 (336)
T KOG1197|consen  194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVR  268 (336)
T ss_pred             ceeeccc--hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhcc
Confidence            9999998  8899999999999 9999999999955 99999999998 9999999843 3333444443322 4433 2


Q ss_pred             EeeecCCcccccH----HHHHHHHhccc
Q 019139          319 GTAFGGFKSRSQV----PWLVDKYMKKV  342 (345)
Q Consensus       319 g~~~~~~~~~~~~----~~~~~~~~~g~  342 (345)
                      .+.++-...+.++    .+++..+.+|+
T Consensus       269 psl~gYi~g~~el~~~v~rl~alvnsg~  296 (336)
T KOG1197|consen  269 PSLLGYIDGEVELVSYVARLFALVNSGH  296 (336)
T ss_pred             HhhhcccCCHHHHHHHHHHHHHHhhcCc
Confidence            3333333333333    44455555554

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-40  Score=312.62  Aligned_cols=299  Identities=26%  Similarity=0.446  Sum_probs=256.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++++++++++|.|++.++||+||+.++++|++|+..+.|..+....|.++|||++|+|+++|++++++++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            79999999976799999999999999999999999999999999888765445688999999999999999999999999


Q ss_pred             EEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        90 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      +|++.+ ...|+.|.+|..++++.|.+...   .|+. .+                  |+|++|+.++.+.++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~  138 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD  138 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence            998754 47899999999999999997653   2322 22                  3999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +.+++.+++++.+||+++.. ..+.++++|+|+|+|++|++++|+|+++|+ +|+++++++++.+.++++|++.++++.+
T Consensus       139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~  216 (333)
T cd08296         139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK  216 (333)
T ss_pred             HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence            99999999999999998844 489999999999999999999999999999 7999999999999999999999988765


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                        .++.+.+.+.  +++|+++|++|....+...+++++++ |+++.+|...  ..+++++..++. +++|.|+..+.   
T Consensus       217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~---  286 (333)
T cd08296         217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT---  286 (333)
T ss_pred             --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence              4566666655  37999999998667799999999997 9999999854  356677766666 99999987443   


Q ss_pred             cccHHHHHHHHhccc
Q 019139          328 RSQVPWLVDKYMKKV  342 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~  342 (345)
                      ..++.++++++++++
T Consensus       287 ~~~~~~~~~~~~~~~  301 (333)
T cd08296         287 ALDSEDTLKFSALHG  301 (333)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            356777777776654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=5.6e-40  Score=311.66  Aligned_cols=328  Identities=44%  Similarity=0.779  Sum_probs=270.2

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++.+++++++|.|++.++||+||+.++++|+.|...+.|.++ ..+|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            79999999888899999999999999999999999999999999888765 34678999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+..+..+|++|.+|++++.+.|...... -+|.. .++.+++.-.|......++.|+|++|+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            999999999999999999999999765321 00000 0000000000111111123469999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+++++.+||.++....++.++++|+|+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+. 
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~-  236 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE-  236 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence            9999999999999999888889999999999988999999999999999955999999999999999999988888765 


Q ss_pred             CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139          250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                       .++.+.+.++..+ ++|++||++++...+...+++++++ |+++.+|.........++...+.. +.++.++.++....
T Consensus       237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (363)
T cd08279         237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP  314 (363)
T ss_pred             -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence             4567777777755 8999999999767789999999997 999999875433456778777776 88889987765555


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      .+.+.++++++++++.
T Consensus       315 ~~~~~~~~~l~~~g~l  330 (363)
T cd08279         315 RRDIPRLLDLYRAGRL  330 (363)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            6788999999988753

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=305.69  Aligned_cols=298  Identities=23%  Similarity=0.391  Sum_probs=249.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            68999998875 99999999999999999999999999999999888766556789999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+..+...|+.|.+|..++++.|.+...   .++. .+                  |+|+||+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~  137 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD  137 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence            99999999999999999999999975432   1211 12                  49999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      .+++ +..++.++++ +.+..+++++++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++++
T Consensus       138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  215 (339)
T PRK10083        138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ  215 (339)
T ss_pred             HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence            8876 4567788885 5577889999999999999999999999996 69967888999999999999999999998865


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                        .++.+.+..  .+ ++|++||++|++.++..++++++++ |+++.+|....  ...++...+.. ++++.++..    
T Consensus       216 --~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----  284 (339)
T PRK10083        216 --EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL----  284 (339)
T ss_pred             --ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence              445555533  23 5789999999877799999999997 99999997532  33445545445 888887753    


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                      ..+++.++++++++|+.
T Consensus       285 ~~~~~~~~~~~~~~g~l  301 (339)
T PRK10083        285 NANKFPVVIDWLSKGLI  301 (339)
T ss_pred             ChhhHHHHHHHHHcCCC
Confidence            23568888888887753

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2e-39  Score=304.77  Aligned_cols=301  Identities=29%  Similarity=0.436  Sum_probs=259.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++.++++.+.+.|++.+++|+||+.++++|++|+....|.++   ...+|.++|+|++|+|+++|++++.++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            68999998877799999999999999999999999999999998888764   235688999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+...|+.|.+|+.+.+++|......   |+. .+                  |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-TD------------------GGFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-CC------------------CcceeeEEecHHHeEECCCC
Confidence            999999998889999999999999999987752   322 23                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++.+++++.|||+++... ..+.++++|+|+|+|++|++++|+|+.+| . +|+++++++++.+.++++|+++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~  217 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL  217 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence            99999999999999999998665 46888999999999889999999999999 6 899998999999999999999998


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      ++++  . +.+.+.++.++ ++|+++|++|+...+..++++++++ |+++.+|....   ..++...++. ++++.++..
T Consensus       218 ~~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~  290 (340)
T cd05284         218 NASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW  290 (340)
T ss_pred             cCCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence            8876  3 67778887776 8999999999867799999999997 99999997532   3455555345 999998865


Q ss_pred             cCCcccccHHHHHHHHhcccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .   ..+.+.++++++++|++
T Consensus       291 ~---~~~~~~~~~~~l~~g~l  308 (340)
T cd05284         291 G---TRAELVEVVALAESGKV  308 (340)
T ss_pred             c---cHHHHHHHHHHHHhCCC
Confidence            4   33678888888887753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=3e-39  Score=304.37  Aligned_cols=307  Identities=30%  Similarity=0.449  Sum_probs=257.0

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++. +++.+.|.|.| .++||+||+.++++|++|...+.|.++..++|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999998876 89999999999 99999999999999999999998887666778999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |+|+..+..+|+.|.+|.++..+.|.........|                   ....|+|++|++++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence            99999999999999999999999998755322111                   1123599999999987  99999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++.+++.+++++.|||+++ ...+++++++|+|.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~  219 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP  219 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            99999999999999999987 67889999999998889999999999999996578888888899999999999999988


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  325 (345)
                      ++  .++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|..............+..++++.++.... 
T Consensus       220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  295 (347)
T cd05278         220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-  295 (347)
T ss_pred             Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence            76  4577777777775 8999999999866689999999997 99999996543221112222122388888875432 


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                        .+.+.+++++++++++
T Consensus       296 --~~~~~~~~~~~~~~~l  311 (347)
T cd05278         296 --RARMPELLDLIEEGKI  311 (347)
T ss_pred             --hhHHHHHHHHHHcCCC
Confidence              4678888888887753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.5e-39  Score=302.02  Aligned_cols=302  Identities=25%  Similarity=0.386  Sum_probs=251.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--------C-CCCCcccCcceeEEEEEeCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------E-GLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------~-~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      |||+++++++. +++++++.|++.+++|+||+.++++|+.|++.+.|...        + .+.|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            68999998876 99999999999999999999999999999998887531        1 14678999999999999999


Q ss_pred             CCC--CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        81 ~v~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      +++  .|++||+|+..+...|+.|.+|..++++.|....   ..|+..                 ...|+|++|+.++.+
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~  139 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE  139 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence            998  8999999999999999999999999999997532   233310                 012499999999988


Q ss_pred             -eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       159 -~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                       .++++|+++++.+++.+ .++.++|+++ +..+++++++|+|.|+|++|++++|+|+++|+..++++++++++.+++++
T Consensus       140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  217 (350)
T cd08256         140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK  217 (350)
T ss_pred             cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence             67899999999999988 7899999987 77889999999997779999999999999998678889999999999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-c-c
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-T-G  314 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~-~  314 (345)
                      +|++.+++..+  .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.....  ..++...+. . +
T Consensus       218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~  292 (350)
T cd08256         218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRKE  292 (350)
T ss_pred             cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhcccc
Confidence            99988888765  5677778888777 8999999999766689999999997 999999975432  334444332 3 7


Q ss_pred             cEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          315 RVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       315 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +++.|+....    ..+.++++++++|+.
T Consensus       293 ~~i~~~~~~~----~~~~~~~~~~~~g~l  317 (350)
T cd08256         293 LDVLGSHLGP----YCYPIAIDLIASGRL  317 (350)
T ss_pred             cEEEEeccCc----hhHHHHHHHHHcCCC
Confidence            8888876442    356777787777643

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.8e-39  Score=310.61  Aligned_cols=297  Identities=19%  Similarity=0.267  Sum_probs=236.8

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-cCCCC----C--CCCCcccCcceeEEEEEeCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP----E--GLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~----~--~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      |+|||+++.++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|...    .  ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            5699999999986 999999999999999999999999999999976 45421    1  14788999999999999999


Q ss_pred             CCC-CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc-
Q 019139           81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-  158 (345)
Q Consensus        81 ~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  158 (345)
                      +++ .|++||||++.+...|+.|.+|. +             .|.. .+|                  +|+||+++|.+ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~-------------~g~~-~~G------------------~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-G-------------YSYT-YPG------------------GLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-C-------------cccc-CCC------------------cceEEEEecHHh
Confidence            998 69999999998888898888772 1             1111 233                  99999999987 


Q ss_pred             ---eEEEcCCCCChhhhccc-ccch-hhhhHHH--------HhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 019139          159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV  222 (345)
Q Consensus       159 ---~~~~iP~~l~~~~aa~~-~~~~-~ta~~al--------~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G--~~~v  222 (345)
                         .++++|+++++++++.+ +.+. .+++.++        .+..++++|++|+|+|+ |++|++++|+|+++|  +.+|
T Consensus       127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V  206 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL  206 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence               58999999999998865 2111 1233332        24567899999999985 999999999999975  4579


Q ss_pred             EEEcCChhHHHHHHhc--------CCc-eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEE
Q 019139          223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTS  292 (345)
Q Consensus       223 i~~~~~~~~~~~~~~~--------g~~-~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~  292 (345)
                      ++++.+++|++.++++        |++ .++++.+ ..++.+.+.+++++ ++|++||++|.+.++..++++++++ |++
T Consensus       207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~  284 (410)
T cd08238         207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL  284 (410)
T ss_pred             EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence            9999999999999997        666 4566543 13577778888877 8999999999888899999999997 888


Q ss_pred             EEeccCC-CCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          293 VIVGVAA-SGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       293 v~~G~~~-~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.++... .....++++..++. +++|.|+..+.   ..+++++++++++|++
T Consensus       285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i  334 (410)
T cd08238         285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKL  334 (410)
T ss_pred             EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCC
Confidence            7765422 22235677777777 99999987543   3689999999999875

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.2e-39  Score=301.08  Aligned_cols=306  Identities=28%  Similarity=0.471  Sum_probs=261.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++.++++++.|.|.+.++||+||+.++++|+.|+..+.|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999998888899999999999999999999999999999999988776556788999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCCC
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA  167 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l  167 (345)
                      +|+..+...|++|.+|..+..+.|..+..   .|+. .+                  |+|++|++++.+  .++++|+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~  138 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV  138 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence            99887778899999999999999998642   2222 12                  499999999974  899999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++++.++.++.+||+++.+..++.++++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.+
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~  217 (345)
T cd08260         139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS  217 (345)
T ss_pred             CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence            9999999999999999998778889999999999999999999999999999 899999999999999999999998876


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc-eecChhhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      + +.++.+.+.++..+++|++||++|+...+...+++++++ |+++.+|....... ..+++..++. ++++.++...  
T Consensus       218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  293 (345)
T cd08260         218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM--  293 (345)
T ss_pred             c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence            4 235666677766568999999999766789999999997 99999997543222 4566665645 8999988653  


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                       ..+.+.++++++++++.
T Consensus       294 -~~~~~~~~~~l~~~~~i  310 (345)
T cd08260         294 -PAHRYDAMLALIASGKL  310 (345)
T ss_pred             -CHHHHHHHHHHHHcCCC
Confidence             23677888888877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.3e-38  Score=304.62  Aligned_cols=322  Identities=28%  Similarity=0.371  Sum_probs=257.4

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.++++ ++++++|.|+| .+++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            78999988755 99999999998 49999999999999999999999987665678999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCC-CCceecCCcccccccCCC-ccccccCcceeeeeEEeecc--eEEEcC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGAT-GAGVMMNDRKSRFSINGK-PIYHFMGTSTFSQYTVVHDV--SVAKID  164 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~~g~~~~~g~~~~~~~~~-~~~~~~~~g~~a~~~~v~~~--~~~~iP  164 (345)
                      |+|+..+...|+.|.+|+.+.++.|.+..... ..++.   |.......+- .+. ....|+|++|++++.+  .++++|
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lp  155 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLY---GHAGAGIFGYSHLT-GGYAGGQAEYVRVPFADVGPFKIP  155 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccc---cccccccccccccc-CCCCCeeEEEEEcccccCeEEECC
Confidence            99999888889999999999999998654321 00000   0000000000 000 0113699999999987  899999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++|++++.++++||+++ +..++.++++|+|+|+|++|++++++|++.|+.+|+++++++++.+.+++++...++
T Consensus       156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi  234 (386)
T cd08283         156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI  234 (386)
T ss_pred             CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence            9999999999999999999998 788899999999998899999999999999985699999999999999998444677


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCC---------------------HHHHHHHHHHhccCCeEEEEeccCCCCC
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIVGVAASGQ  302 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~---------------------~~~~~~~~~~l~~~~G~~v~~G~~~~~~  302 (345)
                      ++.+. .++.+.+.+++.+ ++|++||++|+                     ...+..++++++++ |+++.+|..... 
T Consensus       235 ~~~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-  311 (386)
T cd08283         235 NFEEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-  311 (386)
T ss_pred             cCCcc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-
Confidence            76551 1477788888777 89999999975                     24688899999998 999999975432 


Q ss_pred             ceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          303 EISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       303 ~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ...+++..++. ++++.++...   ..+.+.++++++++++.
T Consensus       312 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l  350 (386)
T cd08283         312 VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGEL  350 (386)
T ss_pred             cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCC
Confidence            34556544455 8999887532   34678888888887753

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.5e-38  Score=300.19  Aligned_cols=304  Identities=28%  Similarity=0.421  Sum_probs=257.3

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC------------CCCCcccCcceeEEEEE
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE------------GLFPCILGHEAAGIVES   77 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------------~~~p~~~G~e~~G~Vv~   77 (345)
                      |||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.|.++.            ..+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            789999988888999999999999999999999999999999988776531            24567899999999999


Q ss_pred             eCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        78 ~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      +|++++.+++||+|+..+...|+.|.+|.++.++.|.....   .|..                   +.|+|++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-------------------QDGGYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-------------------ccCcceeeEEecH
Confidence            99999999999999999999999999999999999976532   1211                   2249999999999


Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      +.++++|+++++.+++.+.+++.+||+++.......++++|+|+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  218 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA  218 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999999998777777789999999889999999999999999778899999999999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-cccE
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV  316 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~  316 (345)
                      +|++.+++.++  ..+.+.+.++.++++|++||++|+...+..++++|+++ |+++.+|.........++  .+. ++++
T Consensus       219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~--~~~~~~~~  293 (350)
T cd08240         219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLP--LLPLRALT  293 (350)
T ss_pred             hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHH--HHhhcCcE
Confidence            99988887765  45566677766668999999999777799999999997 999999975433233333  233 4889


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.++.....   +++.+++++++++..
T Consensus       294 i~~~~~~~~---~~~~~~~~ll~~~~i  317 (350)
T cd08240         294 IQGSYVGSL---EELRELVALAKAGKL  317 (350)
T ss_pred             EEEcccCCH---HHHHHHHHHHHcCCC
Confidence            998876543   678888888887753

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-38  Score=293.56  Aligned_cols=300  Identities=28%  Similarity=0.462  Sum_probs=255.0

Q ss_pred             eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      ||++++.+++ +.+++++++.|++.++||+||+.++++|++|.+...|.+.....|.++|+|++|+|+.+|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            5788888755 359999999999999999999999999999999888876444567899999999999999999999999


Q ss_pred             CEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        89 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      |+|+..+. ..|+.|.+|..+..+.|+....   .|.. .                  .|+|++|++++.+.++++|+++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~lp~~~  138 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQ-A------------------DGGFAEYVLVPEESLHELPENL  138 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeec-C------------------CCceEEEEEcchHHeEECcCCC
Confidence            99998774 7899999999999999987432   2211 2                  2499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhHHHHHHhcCCceEeC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~--~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++.+++ +..++.+||+++....+++++++|+|.|+|.+|++++|+|+++|+ +|+++  ++++++.++++++|++.+ +
T Consensus       139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~  215 (306)
T cd08258         139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N  215 (306)
T ss_pred             CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence            999887 666888999998888899999999998889999999999999999 67765  345567888899999877 6


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +..  .++.+.+.+...+ ++|++||++|+...+...++.|+++ |+++.+|..+ +....++...++. +++|.|++++
T Consensus       216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~  291 (306)
T cd08258         216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS  291 (306)
T ss_pred             CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence            654  5677778777766 8999999998767789999999997 9999999864 3456777777776 9999999987


Q ss_pred             CCcccccHHHHHHHHhcc
Q 019139          324 GFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g  341 (345)
                      +.   +++.++++++++|
T Consensus       292 ~~---~~~~~~~~~~~~~  306 (306)
T cd08258         292 TP---ASWETALRLLASG  306 (306)
T ss_pred             ch---HhHHHHHHHHhcC
Confidence            54   7899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.7e-38  Score=304.68  Aligned_cols=309  Identities=21%  Similarity=0.256  Sum_probs=253.8

Q ss_pred             cceeeeeeeecc--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCCcccCcc
Q 019139            6 QVITCKAAVAWE--PN---KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE   70 (345)
Q Consensus         6 ~~~~~~a~~~~~--~~---~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e   70 (345)
                      .|.+|+|+++..  ++   +.++++++|.|.++++||+||+.+++||++|++...|...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            567899999863  22   2378899999999999999999999999999988776511          01123589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139           71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS  150 (345)
Q Consensus        71 ~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a  150 (345)
                      ++|+|+++|++++.+++||+|++.+...|+.|.+|..+.+++|.....   .|....                  .|+|+
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a  147 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFA  147 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcce
Confidence            999999999999999999999999888999999999999999986543   222112                  24999


Q ss_pred             eeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       151 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      +|++++...++++|+++++.+++.+++++.|||+++...  .+++++++|+|+|+ |++|++++++|+++|+ +++++++
T Consensus       148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~  226 (393)
T cd08246         148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS  226 (393)
T ss_pred             eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence            999999999999999999999999999999999988654  67899999999998 9999999999999999 7888889


Q ss_pred             ChhHHHHHHhcCCceEeCCCCCC--------------------ccHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHh
Q 019139          228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC  285 (345)
Q Consensus       228 ~~~~~~~~~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g--g~d~v~d~~g~~~~~~~~~~~l  285 (345)
                      ++++.+.++++|++.+++.++.+                    ..+.+.+.+++++  ++|++||++|+ ..+...++++
T Consensus       227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l  305 (393)
T cd08246         227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC  305 (393)
T ss_pred             CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence            99999999999999998864421                    1255677777776  69999999997 4589999999


Q ss_pred             ccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          286 HKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       286 ~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                      +++ |+++.+|... .....++...++. ++++.|++.+.+   +++.+++++++++.
T Consensus       306 ~~~-G~~v~~g~~~-~~~~~~~~~~l~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~  358 (393)
T cd08246         306 DRG-GMVVICAGTT-GYNHTYDNRYLWMRQKRIQGSHFAND---REAAEANRLVMKGR  358 (393)
T ss_pred             ccC-CEEEEEcccC-CCCCCCcHHHHhhheeEEEecccCcH---HHHHHHHHHHHcCC
Confidence            997 9999999743 2234566666666 889999876543   56778888887764

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.7e-38  Score=298.33  Aligned_cols=327  Identities=32%  Similarity=0.538  Sum_probs=264.0

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC---CC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~---~~   86 (345)
                      |||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.+.++. .+|.++|||++|+|+.+|++++.   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            689999998777999999999999999999999999999999988887654 56789999999999999999988   99


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccC-CCccccccCcceeeeeEEeecceEEEcCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      +||+|+..+..+|+.|.+|..+.+++|.....+...+....+|...+... +.++. ....|+|++|+.++.+.++++|+
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~  158 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE  158 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence            99999998888999999999999999997653211110001110000000 00000 01236999999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++++.+++.+++++.|||+++.....+.++++|+|+|+|++|++++++|+.+|+..+++++.++++.+.++++|++.+++
T Consensus       159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~  238 (367)
T cd08263         159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN  238 (367)
T ss_pred             CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence            99999999999999999999877788899999999988999999999999999954898989999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      .++  .++.+.+.+..++ ++|++||++++...+..++++++++ |+++.+|.........++...++. ++++.++...
T Consensus       239 ~~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (367)
T cd08263         239 AAK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA  315 (367)
T ss_pred             CCc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence            876  4667777777766 8999999999874689999999997 999999875433344566666644 8888886422


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                        ...+.+.++++++++++.
T Consensus       316 --~~~~~~~~~~~ll~~~~l  333 (367)
T cd08263         316 --RPRQDLPELVGLAASGKL  333 (367)
T ss_pred             --CcHHHHHHHHHHHHcCCC
Confidence              224678888888887753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.6e-38  Score=295.73  Aligned_cols=302  Identities=28%  Similarity=0.409  Sum_probs=257.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++. ++++++|.|+| .++||+||+.++++|+.|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68999998886 99999999996 89999999999999999999998877655568899999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |+|++.+...|++|.+|..+..+.|....+.  .|.. .+                  |+|++|+.++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~  138 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG  138 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence            9999988889999999999999999865432  1211 22                  499999999987  89999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++.+++.+++++.+||+++....++.++++|+|.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~  218 (345)
T cd08286         139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS  218 (345)
T ss_pred             CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence            99999999999999999987778889999999999889999999999999994488889899999999999999999988


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      .+  .++.+.+.+++.+ ++|++||++|....+..+++.|+++ |+++.+|...  ...++++..++. ++++.+..+. 
T Consensus       219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-  292 (345)
T cd08286         219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD-  292 (345)
T ss_pred             cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc-
Confidence            75  4566777777766 8999999999877789999999998 9999999743  245667766555 9999876432 


Q ss_pred             CcccccHHHHHHHHhccc
Q 019139          325 FKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~  342 (345)
                         .+.+.+++++++++.
T Consensus       293 ---~~~~~~~~~~~~~~~  307 (345)
T cd08286         293 ---TNTTPMLLKLVSSGK  307 (345)
T ss_pred             ---hhhHHHHHHHHHcCC
Confidence               245777788887765

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=8.4e-39  Score=293.13  Aligned_cols=252  Identities=27%  Similarity=0.408  Sum_probs=211.1

Q ss_pred             ccCcceeEEEEEeCCCCC------CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCc
Q 019139           66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP  139 (345)
Q Consensus        66 ~~G~e~~G~Vv~~G~~v~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~  139 (345)
                      ++|||++|+|+++|++|+      .+++||||++.+..+|+.|.+|+.++++.|.+....   |.....+          
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~----------   67 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS----------   67 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC----------
Confidence            589999999999999998      899999999999999999999999999999875532   2110000          


Q ss_pred             cccccCcceeeeeEEeecc-eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 019139          140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG  218 (345)
Q Consensus       140 ~~~~~~~g~~a~~~~v~~~-~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G  218 (345)
                        +....|+|+||+++|++ .++++|+++++++++.+++++.|+|+++ +.....++++|+|+|+|++|++++|+|+++|
T Consensus        68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence              00112499999999997 7999999999999999998999999987 4455569999999999999999999999999


Q ss_pred             CCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       219 ~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++|++++++++|+++++++|++.+++..+    ..+.+.+++.+ ++|++||++|++.+++.++++++++ |+++.+|.
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~  219 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS  219 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence            955999999999999999999998887653    24556666666 8999999999888899999999998 99999997


Q ss_pred             CCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcc
Q 019139          298 AASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       298 ~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g  341 (345)
                      .....++++++..++. +++|.|+..++   .++++++++++.++
T Consensus       220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~  261 (280)
T TIGR03366       220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAAN  261 (280)
T ss_pred             CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhh
Confidence            5433456788888877 99999987543   36899999999875

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.5e-38  Score=295.36  Aligned_cols=269  Identities=22%  Similarity=0.283  Sum_probs=214.1

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecC-ccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      +|||+++.+++. ++++++|.|+|+++||+||+.++||| ++|++.+.|.++.   ..+|.++|||++|+|+++|+++ .
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            478999998876 99999999999999999999999996 7999988887643   2579999999999999999998 5


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+...    ..|..|..               |   ..                  |+|+||+.+|++.++++|
T Consensus        79 ~~vGdrV~~~~----~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVPG----SNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEeC----cccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence            99999998632    22322210               0   12                  399999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      ++++++. +.++ ++.|||+++.. . ..++++|+|+|+|++|++++|+|+++|++.|++++.++++++.++.+   .++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i  191 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL  191 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence            9999764 4444 57899998844 3 34688999999999999999999999996677788877777766543   344


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ++.+   .        .+.++|++||++|++.+++.++++++++ |+++++|....  ..++++..++. ++++.|+...
T Consensus       192 ~~~~---~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~  257 (308)
T TIGR01202       192 DPEK---D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEW  257 (308)
T ss_pred             Chhh---c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEeccc
Confidence            4322   0        1238999999999987789999999997 99999998543  45666666666 8999988644


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .   .++++++++++++|++
T Consensus       258 ~---~~~~~~~~~l~~~g~i  274 (308)
T TIGR01202       258 Q---PGDLHAVRELIESGAL  274 (308)
T ss_pred             c---hhHHHHHHHHHHcCCC
Confidence            2   3679999999998874

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=7.4e-38  Score=300.66  Aligned_cols=310  Identities=22%  Similarity=0.299  Sum_probs=253.3

Q ss_pred             Ccceeeeeeeecc--CCC---CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC----------CCCCC-cccC
Q 019139            5 GQVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILG   68 (345)
Q Consensus         5 ~~~~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G   68 (345)
                      ..|.+|||+++..  ++.   .+++.++|.|.|.++||+||+.++++|++|.+...+...          ....| .++|
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G   82 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG   82 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence            3456799999965  453   388999999999999999999999999999877655321          11223 3899


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcce
Q 019139           69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST  148 (345)
Q Consensus        69 ~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~  148 (345)
                      ||++|+|+++|++++.+++||+|++.....|++|.+|+.++++.|.....   .|....+                  |+
T Consensus        83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~  141 (398)
T TIGR01751        83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GS  141 (398)
T ss_pred             cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------cc
Confidence            99999999999999999999999999999999999999999999976542   2211122                  49


Q ss_pred             eeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139          149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI  225 (345)
Q Consensus       149 ~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~  225 (345)
                      |++|+.++.+.++++|+++++++++.+.+++.+||+++..  ..++.++++|+|+|+ |++|++++|+|+++|+ +++++
T Consensus       142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~  220 (398)
T TIGR01751       142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV  220 (398)
T ss_pred             ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence            9999999999999999999999999999999999998754  467889999999998 9999999999999999 78888


Q ss_pred             cCChhHHHHHHhcCCceEeCCCCCC--------------------ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHH
Q 019139          226 DIDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC  284 (345)
Q Consensus       226 ~~~~~~~~~~~~~g~~~~i~~~~~~--------------------~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~  284 (345)
                      ++++++.+.++++|++.++|+++.+                    ..+.+.+.+++++ ++|++|||+|. ..+...+++
T Consensus       221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~  299 (398)
T TIGR01751       221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFV  299 (398)
T ss_pred             cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHh
Confidence            8889999999999999999875421                    1244566777776 89999999997 458999999


Q ss_pred             hccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          285 CHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       285 l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ++++ |+++.+|... .....++...++. ++++.++.++..   +++.++++++++++
T Consensus       300 l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~  353 (398)
T TIGR01751       300 CRRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGR  353 (398)
T ss_pred             hccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCC
Confidence            9997 9999999853 3345566666666 888988876543   45677778777664

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=5.1e-38  Score=273.86  Aligned_cols=286  Identities=24%  Similarity=0.324  Sum_probs=240.6

Q ss_pred             CCcceeeeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeC
Q 019139            4 EGQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVG   79 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G   79 (345)
                      +..+...|++++.+.|.|   ++++++++|+...++|+||.+|+-||++|+..++|.||.. ++|.+-|+|++|+|+++|
T Consensus        14 ~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vG   93 (354)
T KOG0025|consen   14 SQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVG   93 (354)
T ss_pred             cccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEec
Confidence            345577899999998877   8889999999888889999999999999999999999875 789999999999999999


Q ss_pred             CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      +.+++|++||+|+....                              .                  .|+|++|.+.+++.
T Consensus        94 s~vkgfk~Gd~VIp~~a------------------------------~------------------lGtW~t~~v~~e~~  125 (354)
T KOG0025|consen   94 SNVKGFKPGDWVIPLSA------------------------------N------------------LGTWRTEAVFSESD  125 (354)
T ss_pred             CCcCccCCCCeEeecCC------------------------------C------------------CccceeeEeecccc
Confidence            99999999999986432                              1                  24999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----  234 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~----  234 (345)
                      ++++++.++++.||.+.+..+|||+.|.+..++.+||+|+-.|+ +++|++.+|+||++|+ +.|-+.|+....+.    
T Consensus       126 Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~  204 (354)
T KOG0025|consen  126 LIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQ  204 (354)
T ss_pred             eEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHH
Confidence            99999999999999999999999999999999999998888898 9999999999999999 66666666655444    


Q ss_pred             HHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139          235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT  313 (345)
Q Consensus       235 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  313 (345)
                      ++.+||++++...+...  .+........ .+.+.|+|+|+.+ ...+.+.|..| |+++.+|.++ .++++++...+++
T Consensus       205 Lk~lGA~~ViTeeel~~--~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMS-kqPv~~~ts~lIF  279 (354)
T KOG0025|consen  205 LKSLGATEVITEEELRD--RKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMS-KQPVTVPTSLLIF  279 (354)
T ss_pred             HHHcCCceEecHHHhcc--hhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCcc-CCCcccccchhee
Confidence            45799999986544211  1111111223 7899999999977 78899999998 9999999865 6789999988888


Q ss_pred             -ccEEEEeeecCCccc--------ccHHHHHHHHhcccc
Q 019139          314 -GRVWKGTAFGGFKSR--------SQVPWLVDKYMKKVN  343 (345)
Q Consensus       314 -~~~i~g~~~~~~~~~--------~~~~~~~~~~~~g~~  343 (345)
                       +++++|++++.|...        +-+.++.+++++|++
T Consensus       280 Kdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i  318 (354)
T KOG0025|consen  280 KDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKL  318 (354)
T ss_pred             ccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCee
Confidence             999999999988633        223677788888875

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=3.2e-37  Score=290.29  Aligned_cols=305  Identities=27%  Similarity=0.399  Sum_probs=251.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++ .+++++++.|+|. ++||+||+.++++|+.|.....|.++ ...|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            6899998775 4999999999985 99999999999999999998888765 3457899999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |+|+..+...|+.|.+|+.++.+.|.+...   .|....               ....|+|++|++++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~  140 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDG  140 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCC
Confidence            999998888999999999999999976432   110000               0012499999999864  99999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++++++++++.+++|||+++. .....++++|+|+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus       141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~  218 (344)
T cd08284         141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF  218 (344)
T ss_pred             CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence            999999999999999999884 47888999999998899999999999999975788888889999999999975 4555


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      +.  .++.+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|... .....++....+. ++++.+...  
T Consensus       219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~--  292 (344)
T cd08284         219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHT-AEEFPFPGLDAYNKNLTLRFGRC--  292 (344)
T ss_pred             CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCC-CCCccccHHHHhhcCcEEEEecC--
Confidence            44  4567778887776 8999999999877799999999997 9999999754 2334455555555 888876532  


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                       ...+.+.+++++++++++
T Consensus       293 -~~~~~~~~~~~~~~~~~i  310 (344)
T cd08284         293 -PVRSLFPELLPLLESGRL  310 (344)
T ss_pred             -CcchhHHHHHHHHHcCCC
Confidence             234678888888888764

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.5e-37  Score=292.06  Aligned_cols=304  Identities=27%  Similarity=0.391  Sum_probs=252.7

Q ss_pred             eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139           11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH   90 (345)
Q Consensus        11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~   90 (345)
                      |+++.+..+..+++++++.|+|.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            57788877777999999999999999999999999999999999887755567899999999999999999999999999


Q ss_pred             EE-ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           91 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        91 V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      |+ ......|++|.+|+.+..++|++..... .|..              ..+....|+|+||+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~  145 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKY--------------PDGTITQGGYADHIVVDERFVFKIPEGLDS  145 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcc-cccc--------------cCCCcCCCcceeEEEechhheEECCCCCCH
Confidence            97 4555789999999999999998765421 1110              001122359999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+.+.+.+||+++. ...++++++++|.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++... 
T Consensus       146 ~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~-  222 (337)
T cd05283         146 AAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD-  222 (337)
T ss_pred             HHhhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence            999999999999999874 4468999999998889999999999999999 8999999999999999999998887764 


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR  328 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~  328 (345)
                       .++.+   . ..+++|++||++|+...+..++++++++ |+++.+|....  ...+++..++. ++++.|+..+.   .
T Consensus       223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~  291 (337)
T cd05283         223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG---R  291 (337)
T ss_pred             -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---H
Confidence             22211   1 2348999999999875689999999997 99999998543  23667777665 99999988663   3


Q ss_pred             ccHHHHHHHHhcccc
Q 019139          329 SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 ~~~~~~~~~~~~g~~  343 (345)
                      +++..+++++++++.
T Consensus       292 ~~~~~~~~~~~~~~l  306 (337)
T cd05283         292 KETQEMLDFAAEHGI  306 (337)
T ss_pred             HHHHHHHHHHHhCCC
Confidence            678888888887753

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.6e-37  Score=289.27  Aligned_cols=301  Identities=26%  Similarity=0.413  Sum_probs=250.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++...++++.|.|.|.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            789999998875448999999999999999999999999999988886643 2467999999999999999999999999


Q ss_pred             EEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        90 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      +|+..+ ...|+.|.+|..+..+.|.+...   .|.. .+                  |+|++|+.++.+.++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~  137 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD  137 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence            998754 47899999999999999987653   2322 23                  3999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +.+++.++.++.|||+++ ...+++++++|+|+|+|++|++++|+|+. +|+ +|+++++++++++.++++|++.+++++
T Consensus       138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  215 (338)
T PRK09422        138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK  215 (338)
T ss_pred             HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence            999999999999999987 77889999999999999999999999998 499 899999999999999999999888875


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                      .. .++.+.+.+..+ ++|.++++.++...+..++++++++ |+++.+|....  ..+++...+.. ++++.|+.++   
T Consensus       216 ~~-~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---  287 (338)
T PRK09422        216 RV-EDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG---  287 (338)
T ss_pred             cc-ccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence            31 345566766665 6885555555667799999999997 99999997532  34556555555 8888887643   


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                      ..+++.++++++++|+.
T Consensus       288 ~~~~~~~~~~l~~~g~l  304 (338)
T PRK09422        288 TRQDLEEAFQFGAEGKV  304 (338)
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            23678888888887753

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=290.71  Aligned_cols=298  Identities=26%  Similarity=0.390  Sum_probs=249.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++++++++++|.|++.++||+||+.++++|++|+....|..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            78999999998899999999999999999999999999999998888766556788999999999999999998899999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|++.....|+.|.+|..+.++.|......   |.. .+                  |+|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~  138 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSD  138 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCcccccc---ccc-cC------------------ceeeeeeecchhceEECCCCCCH
Confidence            999988889999999999999999886542   211 22                  49999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      .+++.+++++.+||+++... .++++++|+|+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++ ++.+++.. 
T Consensus       139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-  214 (334)
T PRK13771        139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-  214 (334)
T ss_pred             HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence            99999999999999988555 8899999999998 9999999999999999 899999999999988888 66666553 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                         ++.+.+.++  +++|++||++|+.. ....+++++++ |+++.+|.......+.++...++. ++++.++...   .
T Consensus       215 ---~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  284 (334)
T PRK13771        215 ---KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---T  284 (334)
T ss_pred             ---hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---C
Confidence               244555554  37999999999855 88999999997 999999975432221233333334 8899887532   3


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      .+++.++++++++++.
T Consensus       285 ~~~~~~~~~~~~~~~l  300 (334)
T PRK13771        285 KRDVEEALKLVAEGKI  300 (334)
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            4778889998887753

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=4.5e-37  Score=289.20  Aligned_cols=300  Identities=26%  Similarity=0.388  Sum_probs=246.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      ||++++.+++.++++.+.|.|+|+++||+||+.++++|++|..++.+..   ....+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899999888889999999999999999999999999999998766532   1224678999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+..+|..|.+|+.+++++|++..+   .+.+ .+                  |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVN-RP------------------GAFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeec-CC------------------CcceeeEEechHHeEECcCC
Confidence            99999999999999999999999999987532   2221 22                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++.+++.+ .++.++++++..  ...+|++|+|.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~  215 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV  215 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            999888754 466666665532  34689999998889999999999999998668888888999999999999999988


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      ++  .++.+.+.+++.+ ++|++|||.|+...+..++++++++ |+++.+|....  ..+++...+.. ++++.++....
T Consensus       216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~  290 (341)
T PRK05396        216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGRE  290 (341)
T ss_pred             cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEccC
Confidence            76  5677778777766 8999999999877799999999997 99999997543  33444555555 88998875322


Q ss_pred             CcccccHHHHHHHHhcc
Q 019139          325 FKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g  341 (345)
                        ..+.+..++++++++
T Consensus       291 --~~~~~~~~~~~~~~~  305 (341)
T PRK05396        291 --MFETWYKMSALLQSG  305 (341)
T ss_pred             --ccchHHHHHHHHHcC
Confidence              224455677777766

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.6e-37  Score=290.73  Aligned_cols=305  Identities=25%  Similarity=0.379  Sum_probs=244.0

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ..++++++..++. +++++.+.|.|.++||+||+.++++|++|+....+...   ...+|.++|||++|+|+++|++++.
T Consensus        16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
T PLN02702         16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH   94 (364)
T ss_pred             cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence            4455555566644 88999999999999999999999999999998876321   1135789999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||+|++.+...|+.|.+|+.+..+.|+....   .+....+                  |+|++|++++.+.++++|
T Consensus        95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~------------------g~~~~y~~v~~~~~~~~P  153 (364)
T PLN02702         95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH------------------GSLANQVVHPADLCFKLP  153 (364)
T ss_pred             CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC------------------CcccceEEcchHHeEECC
Confidence            9999999999999999999999999999986321   1111012                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++.+++.. .++.++++++ ...++.++++|+|+|+|++|++++|+|+++|+..++++++++++.+.++++|++.++
T Consensus       154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~  231 (364)
T PLN02702        154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV  231 (364)
T ss_pred             CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence            99999988752 2455678776 778889999999998899999999999999996788888899999999999999887


Q ss_pred             CCCCCCccHHHHHHhh---cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~---~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      ++.....++.+.+.++   +++++|++||++|+...+..++++++++ |+++.+|....  ...+.+..+.. ++++.++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~  308 (364)
T PLN02702        232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGV  308 (364)
T ss_pred             ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEe
Confidence            7643224565655544   3348999999999777799999999997 99999997432  24445555666 8999987


Q ss_pred             eecCCcccccHHHHHHHHhcccc
Q 019139          321 AFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +..    ...+.++++++++++.
T Consensus       309 ~~~----~~~~~~~~~~~~~~~l  327 (364)
T PLN02702        309 FRY----RNTWPLCLEFLRSGKI  327 (364)
T ss_pred             ccC----hHHHHHHHHHHHcCCC
Confidence            632    2467778888877753

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=7.4e-37  Score=287.71  Aligned_cols=302  Identities=29%  Similarity=0.454  Sum_probs=255.1

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++. +.+++.+.|++.+++|+||+.++++|+.|+..+.|.++....|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68999988874 99999999999999999999999999999999888764344578999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce-----EEEcC
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID  164 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~iP  164 (345)
                      +|+..+..+|+.|.+|..+++++|......   |.. .                  .|+|++|+.++.+.     ++++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP  137 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLP  137 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCccee---ccC-C------------------CCcceeeEEecccccccccEEECC
Confidence            999999999999999999999999876532   211 2                  24999999999998     99999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++.+++.+ .++.+||+++. ..+++++++|+|+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.++
T Consensus       138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~  215 (343)
T cd08235         138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI  215 (343)
T ss_pred             CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence            99999999876 68889999884 45899999999998899999999999999994388888999999999999999888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      ++++  .++.+.+.+...+ ++|++||++++...+...+++++++ |+++.+|.........+++..+.. ++++.++..
T Consensus       216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (343)
T cd08235         216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA  292 (343)
T ss_pred             cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence            8876  5677778777777 8999999999876689999999997 999999875433335556555655 888887764


Q ss_pred             cCCcccccHHHHHHHHhccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ..   .+.+.+++++++++.
T Consensus       293 ~~---~~~~~~~~~l~~~~~  309 (343)
T cd08235         293 AS---PEDYKEALELIASGK  309 (343)
T ss_pred             CC---hhhHHHHHHHHHcCC
Confidence            32   356788888887775

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=7.4e-37  Score=291.52  Aligned_cols=312  Identities=29%  Similarity=0.386  Sum_probs=249.3

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      ||++++.+++ +++++++|.|.+ .++||+||+.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            6889998876 499999999996 799999999999999999999988765 3468999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |+|+..+..+|+.|.+|+.++.+.|.+..+. ..| . ..|     ..+  +  ....|+|++|+++|.+  .++++|++
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~-~-~~~-----~~~--~--~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAG-G-AYG-----YVD--M--GPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-ccc-c-ccc-----ccc--c--CCCCCeeeeEEEeecccCcEEECCCC
Confidence            9999999999999999999999999864321 000 0 000     000  0  0012599999999976  89999999


Q ss_pred             CChh---hhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          167 APLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       167 l~~~---~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      +++.   +++.+..++++||+++ ...++.++++|+|.|+|++|++++|+|+++|+..|+++++++++.++++++|+ ..
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~  224 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP  224 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence            9998   5677888999999988 78889999999999889999999999999998678889999999999999998 45


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHH-----------HHHHHHHHhccCCeEEEEeccCCCC-----------
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASG-----------  301 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~-----------~~~~~~~~l~~~~G~~v~~G~~~~~-----------  301 (345)
                      +++.+  .++.+.+.+++++++|++||++|+..           .+..++++++++ |+++.+|.....           
T Consensus       225 v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~  301 (375)
T cd08282         225 IDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ  301 (375)
T ss_pred             eccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence            66654  45667777776668999999999752           488999999997 999988874321           


Q ss_pred             CceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          302 QEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       302 ~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ..+.++...++. +.++.++...   ..+.+.++++++++++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l  341 (375)
T cd08282         302 GELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRA  341 (375)
T ss_pred             ccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCC
Confidence            124456556655 7777776432   23567888888877654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.9e-37  Score=286.34  Aligned_cols=299  Identities=32%  Similarity=0.519  Sum_probs=253.1

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++. +++.++|.|++.++||+|||.++++|+.|+....|..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            68999998875 99999999999999999999999999999999888766555688999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+..+..+|+.|..|+.+++|.|.....   .+++ .                  .|+|++|+.++.+ ++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~  136 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSL  136 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-C------------------CCcceeEEEechh-eEECCCCCCH
Confidence            99998888999999999999999943211   1111 1                  2499999999999 9999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++++ ..++++++++ ...++.++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|+++++++.+ 
T Consensus       137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~-  212 (337)
T cd08261         137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD-  212 (337)
T ss_pred             HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence            999877 4778888876 77889999999999889999999999999999 8999989999999999999999998876 


Q ss_pred             CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139          250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                       .++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|...  ....+++..+.. ++++.++..   ..
T Consensus       213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---~~  285 (337)
T cd08261         213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSRN---AT  285 (337)
T ss_pred             -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEecc---CC
Confidence             4577788877776 8999999998877789999999997 9999998754  234556655655 888887642   23


Q ss_pred             cccHHHHHHHHhcccc
Q 019139          328 RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~~  343 (345)
                      .+.+.++++++++|.+
T Consensus       286 ~~~~~~~~~l~~~~~i  301 (337)
T cd08261         286 REDFPDVIDLLESGKV  301 (337)
T ss_pred             hhhHHHHHHHHHcCCC
Confidence            3577888888887753

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=9.4e-37  Score=287.33  Aligned_cols=301  Identities=29%  Similarity=0.440  Sum_probs=249.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++. +++++.|.|+| +++||+||+.++++|++|++.+.|.++. ..|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            68999988775 99999999996 8999999999999999999988877653 457899999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |+|+..+...|+.|.+|..++.+.|.+...   +|.. .+|                  +|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~  136 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS  136 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence            999886677899999999999999986543   2221 334                  99999999975  99999999


Q ss_pred             CChhhhc-----ccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       167 l~~~~aa-----~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +++..+.     .+...+.+||+++ ....++++++|+|.|+|++|++++|+|+++|+..++++++++++.+.++++|++
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~  215 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT  215 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence            9872221     1225678899887 567889999999988899999999999999996688888888899999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      .++++.+  .++.+.+.+++++ ++|+++|++|++..+..++++++++ |+++.+|....  ...+++...+. ++++.+
T Consensus       216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~  290 (345)
T cd08287         216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG  290 (345)
T ss_pred             eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence            9998876  4677778877776 8999999999877899999999997 99999987542  45566644445 999988


Q ss_pred             eeecCCcccccHHHHHHHHhcccc
Q 019139          320 TAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ....   ..+.+.++++++++++.
T Consensus       291 ~~~~---~~~~~~~~~~~~~~~~l  311 (345)
T cd08287         291 GPAP---VRRYLPELLDDVLAGRI  311 (345)
T ss_pred             ecCC---cHHHHHHHHHHHHcCCC
Confidence            6433   23678888888887763

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=3.4e-37  Score=288.09  Aligned_cols=275  Identities=21%  Similarity=0.232  Sum_probs=226.3

Q ss_pred             eeeeeeccCCC-----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139           10 CKAAVAWEPNK-----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus        10 ~~a~~~~~~~~-----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      |||+++.+++.     .++++++|.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            68999998885     3788899999999999999999999999999999887653 35789999999999999999998


Q ss_pred             C-CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        84 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      + |++||+|+....                              .+                  |+|+||+++|.+.+++
T Consensus        81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~  112 (324)
T cd08291          81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP  112 (324)
T ss_pred             ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence            6 999999984310                              01                  3999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE-c-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-G-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~-G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|+++++.+++++++...|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.+.++++|+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~  189 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA  189 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence            9999999999988888899975 4455555 45556665 4 49999999999999999 89999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK  318 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  318 (345)
                      ++++++.+  .++.+.+.+++.+ ++|++||++|+.. ....+++++++ |+++.+|.........++...++. ++++.
T Consensus       190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08291         190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE  265 (324)
T ss_pred             cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence            99998876  5677888888877 8999999999866 67789999997 999999974332222355556555 99999


Q ss_pred             EeeecCCcc---cccHHHHHHHHh
Q 019139          319 GTAFGGFKS---RSQVPWLVDKYM  339 (345)
Q Consensus       319 g~~~~~~~~---~~~~~~~~~~~~  339 (345)
                      |+..+.+..   .+++++++++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~  289 (324)
T cd08291         266 GFWLTTWLQKLGPEVVKKLKKLVK  289 (324)
T ss_pred             EEEHHHhhcccCHHHHHHHHHHHh
Confidence            998765432   345677777765

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.9e-36  Score=289.56  Aligned_cols=304  Identities=26%  Similarity=0.402  Sum_probs=247.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC------CC-CCCCcccCcceeEEEEEeCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------PE-GLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~-~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +.+.++..+  .++++++|.|+++++||+||+.++++|++|+..+.+..      +. .++|.++|||++|+|+++|+++
T Consensus        29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v  106 (384)
T cd08265          29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV  106 (384)
T ss_pred             ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence            444455533  49999999999999999999999999999998876321      21 3568899999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      +.|++||+|++.+..+|+.|..|..+++++|.....   .|++ .+|                  +|++|+.++.+.+++
T Consensus       107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~g------------------~~~~~v~v~~~~~~~  164 (384)
T cd08265         107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-ADG------------------AFAEYIAVNARYAWE  164 (384)
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CCC------------------cceeeEEechHHeEE
Confidence            999999999999999999999999999999986542   3332 234                  999999999999999


Q ss_pred             cCCCC-------ChhhhcccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139          163 IDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR  234 (345)
Q Consensus       163 iP~~l-------~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~  234 (345)
                      +|+++       ++. ++++..++++||+++... .++++|++|+|+|+|++|++++|+|+.+|+..|+++++++++.++
T Consensus       165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~  243 (384)
T cd08265         165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL  243 (384)
T ss_pred             CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            99864       444 556667889999998666 689999999999889999999999999998679999999999999


Q ss_pred             HHhcCCceEeCCCCC-CccHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHhccCCeEEEEeccCCCCCceecChhhh
Q 019139          235 AKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL  311 (345)
Q Consensus       235 ~~~~g~~~~i~~~~~-~~~~~~~~~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  311 (345)
                      ++++|++.++++++. ..++.+.+.+++.+ ++|+++|+.|+. ..+..++++|+++ |+++.+|....  .+++++..+
T Consensus       244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~  320 (384)
T cd08265         244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVL  320 (384)
T ss_pred             HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHH
Confidence            999999998887642 23677788888877 899999999973 4588999999997 99999997432  355565555


Q ss_pred             cc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          312 VT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       312 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .. ..++.|+....  ....+.++++++++++.
T Consensus       321 ~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l  351 (384)
T cd08265         321 QVRRAQIVGAQGHS--GHGIFPSVIKLMASGKI  351 (384)
T ss_pred             hhCceEEEEeeccC--CcchHHHHHHHHHcCCC
Confidence            55 77888875321  23568889999987753

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.2e-36  Score=283.39  Aligned_cols=302  Identities=31%  Similarity=0.476  Sum_probs=257.4

Q ss_pred             eeeeeeccCCCC-eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~~~-~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ||++++..++++ +.+++.|.|.+.+++|+||+.++++|+.|.....|.++ ....|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            799999999887 68888889999999999999999999999999888775 2356789999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+..+..+|+.|.+|..++.+.|.....   .|.. .+                  |+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~  138 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV  138 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence            9999999999999999999999999965432   2222 22                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++.+++.++.++.+||+++.....++++++|+|.|+|++|++++++|+.+|+ +|++++.++++.+.++++|++.+++..
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~  217 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL  217 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence            9999999999999999998888889999999998889999999999999999 799999999999999999998888776


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      +  ....+.+ ....+ ++|+++|++|....+..++++|+++ |+++.+|...  ....++...++. +.++.|++..  
T Consensus       218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~--  289 (338)
T cd08254         218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR--DKLTVDLSDLIARELRIIGSFGG--  289 (338)
T ss_pred             C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC--CCCccCHHHHhhCccEEEEeccC--
Confidence            5  3444555 44444 8999999999877799999999997 9999998743  234566666666 8899987643  


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                       ..+.+.+++++++++.+
T Consensus       290 -~~~~~~~~~~ll~~~~l  306 (338)
T cd08254         290 -TPEDLPEVLDLIAKGKL  306 (338)
T ss_pred             -CHHHHHHHHHHHHcCCC
Confidence             34677888888877754

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.9e-36  Score=283.51  Aligned_cols=303  Identities=32%  Similarity=0.494  Sum_probs=257.7

Q ss_pred             eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |||+++.+++ ..+++++++.|.|.++||+||+.++++|++|..++.|.++. .+.|.++|+|++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7899998876 34999999999999999999999999999999988877643 245778999999999999999999999


Q ss_pred             CCEEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           88 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        88 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      ||+|+..+ ...|+.|.+|..++.+.|.....   .|.. ..                  |+|++|+.++.+.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~s~~~~~~~~~~~lp~~  138 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-VD------------------GTFAEYAIADARYVTPIPDG  138 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-cC------------------CcceeEEEeccccEEECCCC
Confidence            99998765 58899999999999999987643   2221 22                  48999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.++..+.|||+++.. .+++++++|+|+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  216 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD  216 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence            9999999999999999998755 58899999999998 6799999999999999 8999999999999999999999988


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +.+  .++.+.+.+++++ ++|++||+.++...+..++++++++ |+++.+|... ....++++..++. ++++.++...
T Consensus       217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~  292 (341)
T cd08297         217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG  292 (341)
T ss_pred             CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC
Confidence            876  4677778887766 8999999888777799999999997 9999999754 3334666666656 9999887543


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                         ..+++.++++++++++.
T Consensus       293 ---~~~~~~~~~~~~~~~~l  309 (341)
T cd08297         293 ---TRQDLQEALEFAARGKV  309 (341)
T ss_pred             ---CHHHHHHHHHHHHcCCC
Confidence               24678888888887753

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.8e-36  Score=282.05  Aligned_cols=291  Identities=23%  Similarity=0.367  Sum_probs=234.0

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-----------CCCCCcccCcceeEEEEEe
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV   78 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~~   78 (345)
                      |||+++.++  ++++++++.|++.++||+||+.++++|+.|++.+.|...           ....|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            689998876  699999999999999999999999999999998877321           2235789999999999999


Q ss_pred             CCCCCC-CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        79 G~~v~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      |++++. +++||+|+..+...|+.|.+|..+...              ..+                  |+|++|++++.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------~~~------------------g~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------EAP------------------GGYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------CCC------------------CceeeeEEech
Confidence            999987 999999999999999999999432110              012                  49999999999


Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      +.++++|+++++++++ ++.++++||+++ ...+++++++|+|+|+|++|++++|+|+.+|++.++++++++++.+++++
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~  204 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA  204 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence            9999999999999887 566888999984 78889999999999889999999999999999668888889999999999


Q ss_pred             cCCceEeCCCCCCc--cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-
Q 019139          238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-  313 (345)
Q Consensus       238 ~g~~~~i~~~~~~~--~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  313 (345)
                      +|++.++++++...  .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.....  ..+.+...+. 
T Consensus       205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~  280 (341)
T cd08262         205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMES--DNIEPALAIRK  280 (341)
T ss_pred             cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCC--CccCHHHHhhc
Confidence            99988888765211  222 33444444 8999999999865688899999997 999999975322  2233333333 


Q ss_pred             ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          314 GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       314 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++++.++...   ..+++.++++++++|++
T Consensus       281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i  307 (341)
T cd08262         281 ELTLQFSLGY---TPEEFADALDALAEGKV  307 (341)
T ss_pred             ceEEEEEecc---cHHHHHHHHHHHHcCCC
Confidence            7888776532   22577888888887754

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.8e-36  Score=281.70  Aligned_cols=291  Identities=28%  Similarity=0.385  Sum_probs=241.4

Q ss_pred             eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      ||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. +...+|.++|||++|+|+++|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6889987766 45888888888899999999999999999999887642 222357799999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+..+..+|+.|.+|+.++.++|.....   .|+. .                  .|+|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~  137 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSIS  137 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccce---eecc-C------------------CCceeeEEEcCHHHceeCCCCCC
Confidence            999999888999999999999999987543   2221 2                  24999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++++.+++++.+||+++. ..+++++++|+|+|+ |++|++++++|+++|+ +|+++++    .+.++++|++.+++.+
T Consensus       138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~  211 (325)
T cd08264         138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD  211 (325)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence            9999999999999999875 488999999999998 9999999999999999 7887753    3667889998888765


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                      +    ..+.+.+++ +++|+++|++|+. .+...+++++++ |+++.+|.. ......++...+.. +.++.++..+.  
T Consensus       212 ~----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--  281 (325)
T cd08264         212 E----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT--  281 (325)
T ss_pred             H----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC--
Confidence            3    244556566 6899999999984 599999999997 999999974 22346677777766 88898886553  


Q ss_pred             ccccHHHHHHHHhc
Q 019139          327 SRSQVPWLVDKYMK  340 (345)
Q Consensus       327 ~~~~~~~~~~~~~~  340 (345)
                       .+++.++++++.+
T Consensus       282 -~~~~~~~~~l~~~  294 (325)
T cd08264         282 -RKELLELVKIAKD  294 (325)
T ss_pred             -HHHHHHHHHHHHc
Confidence             3677778877753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=8e-36  Score=280.77  Aligned_cols=304  Identities=29%  Similarity=0.449  Sum_probs=251.8

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+.++ +++++.+.|++.++||+||+.++++|+.|.....+.++ ...|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            68999998876 99999999999999999999999999999988877652 24578999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+..+...|+.|.+|+.++...|+....   .|.. .                  .|+|++|+++|.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~  136 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDY  136 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-c------------------CCcccceEEechHHeEECcCCCCH
Confidence            99998888999999999999999987642   2211 2                  249999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+ .++.+||+++. ..+++++++|+|+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++.++++++ 
T Consensus       137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~-  213 (343)
T cd08236         137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE-  213 (343)
T ss_pred             HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence            999887 57889999884 778899999999988999999999999999944999988899999999999998888876 


Q ss_pred             CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-ccEEEEeeecCCc
Q 019139          250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       250 ~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                       .. .+.+....++ ++|++||++|+...+..++++|+++ |+++.+|.......+. .+...++. ++++.|+......
T Consensus       214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (343)
T cd08236         214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA  290 (343)
T ss_pred             -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence             33 5566666666 8999999998877789999999997 9999999754321222 22333345 8999998764322


Q ss_pred             --ccccHHHHHHHHhcccc
Q 019139          327 --SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 --~~~~~~~~~~~~~~g~~  343 (345)
                        ..+.+.++++++++++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~l  309 (343)
T cd08236         291 PFPGDEWRTALDLLASGKI  309 (343)
T ss_pred             ccchhhHHHHHHHHHcCCC
Confidence              13567778888887753

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=6.2e-36  Score=281.75  Aligned_cols=298  Identities=32%  Similarity=0.484  Sum_probs=244.7

Q ss_pred             eeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCC-CCC--CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        12 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |+++.+++. +++++.|.|+|.++||+|||.++++|+.|...+.+. .+.  ...|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            467777754 999999999999999999999999999998876322 111  1357789999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|++.+..+|+.|.+|+.+.+++|+.....   +.....                  |+|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPVD------------------GTLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccCC------------------CceeeeEEecHHHcEECcCCCC
Confidence            9999988999999999999999999865331   100012                  4999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +.+++.+ .++.+|++++ ....++++++|+|+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.+++.++
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            9999876 5788999886 8889999999999988999999999999999944888989999999999999999998875


Q ss_pred             CCcc---HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          249 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       249 ~~~~---~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                        .+   +.+.+.+.+++ ++|++||++|+...+...+++++++ |+++.+|....  ...+++..+.. ++++.++...
T Consensus       217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  291 (343)
T cd05285         217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFRY  291 (343)
T ss_pred             --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEeccC
Confidence              33   36667777776 8999999999876689999999997 99999996432  23445444555 8888877532


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                          .+.+.++++++++++
T Consensus       292 ----~~~~~~~~~~l~~~~  306 (343)
T cd05285         292 ----ANTYPTAIELLASGK  306 (343)
T ss_pred             ----hHHHHHHHHHHHcCC
Confidence                256777888887765

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.2e-36  Score=280.83  Aligned_cols=278  Identities=24%  Similarity=0.298  Sum_probs=235.9

Q ss_pred             eeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 019139           10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus        10 ~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      |||+++.+++++   ++++++|.|.+.++||+|||.++++|+.|++.+.|.++ ....|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689999887753   78899999999999999999999999999999888765 23568899999999999999999999


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ++||+|+...                               .+                  |+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~ip~  111 (324)
T cd08292          81 QVGQRVAVAP-------------------------------VH------------------GTWAEYFVAPADGLVPLPD  111 (324)
T ss_pred             CCCCEEEecc-------------------------------CC------------------CcceeEEEEchHHeEECCC
Confidence            9999998532                               12                  3899999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      ++++.+++.++++..+||+++ ...+++++++|+|+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|++.++
T Consensus       112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (324)
T cd08292         112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV  189 (324)
T ss_pred             CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence            999999999998999999987 5578999999999987 9999999999999999 788888888888888889998888


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      +..+  .++.+.+.+++.+ ++|++||++|+.. +..++++++++ |+++.+|.. .....++++..++. ++++.++..
T Consensus       190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (324)
T cd08292         190 STEQ--PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGFWG  264 (324)
T ss_pred             cCCC--chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEEEc
Confidence            8765  5677888888887 9999999999864 88999999997 999999974 23345666655556 999999876


Q ss_pred             cCCc-------ccccHHHHHHHHhcccc
Q 019139          323 GGFK-------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~-------~~~~~~~~~~~~~~g~~  343 (345)
                      ..+.       ..+.+.++++++.+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i  292 (324)
T cd08292         265 GRWSQEMSVEYRKRMIAELLTLALKGQL  292 (324)
T ss_pred             HHhhhhcCHHHHHHHHHHHHHHHHCCCc
Confidence            5321       12457788888888764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=8.9e-36  Score=280.45  Aligned_cols=300  Identities=29%  Similarity=0.412  Sum_probs=242.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++..+.+.+.+.|+|.++||+||+.++++|+.|+..+.+..   .....|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6899999888779999999999999999999999999999988754421   1224577899999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+..+|+.|++|..++++.|.+..   ..|.. .                  .|+|++|++++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-T------------------DGCFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-C------------------CCcceEEEEechHHcEECcCC
Confidence            9999999888999999999999999997531   22222 2                  249999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++++.+ +++.++.++++++.  ....++++|+|.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++++++.
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  215 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP  215 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence            998544 56667888888764  455789999998889999999999999998568888888999999999999888877


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChh-hhcc-ccEEEEeeec
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVT-GRVWKGTAFG  323 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~  323 (345)
                      ++  .++. .+.++.++ ++|++||++|+......++++|+++ |+++.+|....  ...++.. .+.. ++++.++.. 
T Consensus       216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-  288 (341)
T cd05281         216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITG-  288 (341)
T ss_pred             cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEec-
Confidence            65  4566 67777776 9999999999877789999999997 99999987543  2333322 2333 788887752 


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                       ....+.+.+++++++++.
T Consensus       289 -~~~~~~~~~~~~~l~~~~  306 (341)
T cd05281         289 -RKMFETWYQVSALLKSGK  306 (341)
T ss_pred             -CCcchhHHHHHHHHHcCC
Confidence             222356777888887775

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9e-36  Score=278.45  Aligned_cols=297  Identities=34%  Similarity=0.540  Sum_probs=247.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++..+++++.++++|.|.+.++||+||+.++++|+.|++...|..+....|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            68999987666799999999999999999999999999999999988776666788999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+......|+.|.+|+.+.++.|.+...   .|.. ..                  |+|++|++++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~  138 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD  138 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccc---cccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence            99999888999999999999999987522   3322 22                  49999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      ++++.+++++.+||+++.. ..+.++++++|+|+ |++|++++++++..|+ +|+++++++++.+.+++++.+.+++..+
T Consensus       139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (332)
T cd08259         139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK  216 (332)
T ss_pred             HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence            9999999999999998866 88899999999998 9999999999999999 8888888888888888889877775532


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                          +.+.+.+..  ++|++++++|... ...++++++++ |+++.+|..... ...++...... ++++.++...   .
T Consensus       217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~  284 (332)
T cd08259         217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSISA---T  284 (332)
T ss_pred             ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecCC---C
Confidence                445555443  7999999999866 88999999997 999999874322 22233333333 7788777422   3


Q ss_pred             cccHHHHHHHHhccc
Q 019139          328 RSQVPWLVDKYMKKV  342 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~  342 (345)
                      .+++.++++++++|.
T Consensus       285 ~~~~~~~~~~~~~~~  299 (332)
T cd08259         285 KADVEEALKLVKEGK  299 (332)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            467788888887775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-35  Score=276.77  Aligned_cols=284  Identities=25%  Similarity=0.385  Sum_probs=236.3

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.+++ +++++++|.|+++++||+||+.++++|++|.....|.++   .|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            6899999876 499999999999999999999999999999999888764   5789999999999999997   67999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|...+...|+.|.+|..+..+.|.....   .++...+                  |+|++|++++.+.++++|++++.
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~  132 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD  132 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence            99999999999999999999999987543   2221123                  39999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++++.+ .+..++|. +.+..+++++++|+|+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++.+.
T Consensus       133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~  209 (319)
T cd08242         133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE  209 (319)
T ss_pred             HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence            888764 34556665 4578889999999999889999999999999999 69999999999999999999888776431


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR  328 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~  328 (345)
                                ..++++|++||++|+...+..++++++++ |+++..+...  ....++...++. ++++.|+..+     
T Consensus       210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~-----  271 (319)
T cd08242         210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG-----  271 (319)
T ss_pred             ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc-----
Confidence                      12238999999999877789999999997 9999877643  245566666655 8899888643     


Q ss_pred             ccHHHHHHHHhcccc
Q 019139          329 SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 ~~~~~~~~~~~~g~~  343 (345)
                       .+.+++++++++++
T Consensus       272 -~~~~~~~~~~~~~l  285 (319)
T cd08242         272 -PFAPALRLLRKGLV  285 (319)
T ss_pred             -cHHHHHHHHHcCCC
Confidence             26777788877753

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.1e-35  Score=276.66  Aligned_cols=300  Identities=30%  Similarity=0.467  Sum_probs=251.3

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.++++ +++.+.+.|++.++||+||++++++|+.|.....|.++. .+|.++|+|++|+|+.+|++++.+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            68999998885 999999999999999999999999999999998887654 3778999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      +|+.....+|+.|.+|..++++.|....+   .|.. .+                  |+|++|+.++.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~  136 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF  136 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence            99998889999999999999999987643   2211 22                  49999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      .+++.+ .++.++++++ ...+++++++|+|+|+|.+|.+++++|++.|+..|+++++++++.+.++++|++.+++..+ 
T Consensus       137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  213 (334)
T cd08234         137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR-  213 (334)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence            998776 6788999887 7888999999999988999999999999999944888999999999999999988887765 


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR  328 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~  328 (345)
                       .++... +...+.++|++||++|+...+...+++++++ |+++.+|........++++..++. ++++.++...    .
T Consensus       214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  286 (334)
T cd08234         214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P  286 (334)
T ss_pred             -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence             333333 3333348999999998777789999999997 999999975433355666666665 8888887632    2


Q ss_pred             ccHHHHHHHHhcccc
Q 019139          329 SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 ~~~~~~~~~~~~g~~  343 (345)
                      +.+.++++++++++.
T Consensus       287 ~~~~~~~~~~~~~~l  301 (334)
T cd08234         287 YTFPRAIALLESGKI  301 (334)
T ss_pred             HHHHHHHHHHHcCCC
Confidence            457778888877653

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-35  Score=276.27  Aligned_cols=302  Identities=25%  Similarity=0.384  Sum_probs=250.7

Q ss_pred             eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++...+.  .+.+.+.+.|.+.+++|+||+.++++|++|++.+.|..+. ..+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            68898884433  2777888888889999999999999999999988886542 25678999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|++.+...|+.|.+|.+++++.|++...   .|.. .                  .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~------------------~g~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-V------------------DGGYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccc---cccc-c------------------CcceeEEEEechHHceeCCCC
Confidence            99999999999999999999999999987532   2222 1                  248999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.+++++.+||+++.+..++.++++++|+|+ +++|++++++++..|+ +++.+++++++.+.++.++.+.+++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  217 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID  217 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence            9999999999899999999888888999999999998 7999999999999999 7899999999989888888877776


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ..+  .++.+.+.+.+.+ ++|++++++|... +...+++++++ |+++.+|.... ....+++...+. ++++.++...
T Consensus       218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T cd08266         218 YRK--EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTMG  292 (342)
T ss_pred             cCC--hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEecC
Confidence            654  4555666666655 8999999999854 88999999997 99999987543 233455544444 8999888654


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                      .   ..++.+++++++++.
T Consensus       293 ~---~~~~~~~~~~l~~~~  308 (342)
T cd08266         293 T---KAELDEALRLVFRGK  308 (342)
T ss_pred             C---HHHHHHHHHHHHcCC
Confidence            3   356777888887764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.3e-35  Score=276.05  Aligned_cols=293  Identities=27%  Similarity=0.380  Sum_probs=244.9

Q ss_pred             eeeeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 019139           10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus        10 ~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      |||+++.+++.    ++.+.+.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68999998884    58888888888999999999999999999999988877655678899999999999999999999


Q ss_pred             CCCCEEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           86 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        86 ~~Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      ++||+|+..+ ...|+.|.+|..+.++.|+....   .|.. .+                  |+|++|+.++.+.++++|
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp  138 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP  138 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence            9999997654 47899999999999999987653   2222 22                  389999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++.+++.+++++.+||+++ +..+++++++|+|+|+|++|++++++|++.|. +|++++.++++++.++++|++.++
T Consensus       139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  216 (329)
T cd08298         139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG  216 (329)
T ss_pred             CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence            9999999999999999999988 88999999999999999999999999999999 899999999999999999998877


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  324 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  324 (345)
                      +....           ...++|+++++.+....+..++++++++ |+++.+|... .....++...+..+..|.++... 
T Consensus       217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-  282 (329)
T cd08298         217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL-  282 (329)
T ss_pred             ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC-
Confidence            76541           1237999999877777799999999997 9999998632 22223343333337788877533 


Q ss_pred             CcccccHHHHHHHHhccc
Q 019139          325 FKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~  342 (345)
                        ..+.+.+++++++++.
T Consensus       283 --~~~~~~~~~~l~~~~~  298 (329)
T cd08298         283 --TRQDGEEFLKLAAEIP  298 (329)
T ss_pred             --CHHHHHHHHHHHHcCC
Confidence              2356777888887764

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=4.4e-35  Score=274.19  Aligned_cols=297  Identities=31%  Similarity=0.467  Sum_probs=247.5

Q ss_pred             eeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139           11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH   90 (345)
Q Consensus        11 ~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~   90 (345)
                      ||+++.++|..+++++.|.|.+.+++|+||+.++++|++|...+.|..+...+|.++|+|++|+|+++|++++++++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            68899999767999999999999999999999999999999998887654457889999999999999999999999999


Q ss_pred             EEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCCh
Q 019139           91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL  169 (345)
Q Consensus        91 V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~  169 (345)
                      |++.+. ..|+.|.+|+.++.+.|.+..+.   ++. .+                  |+|++|+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~  138 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL  138 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence            987543 67999999999999999986542   211 12                  48999999999999999999999


Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      .+++.+++.+.+||+++.. .+++++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++... 
T Consensus       139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  215 (330)
T cd08245         139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA-  215 (330)
T ss_pred             HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence            9999999999999998844 788999999999888899999999999999 8999999999999999999988887654 


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCccc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR  328 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~  328 (345)
                       ......    ..+++|+++|++++......++++++++ |+++.+|.... ....++...++. +.++.++..+.   .
T Consensus       216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~  285 (330)
T cd08245         216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG---R  285 (330)
T ss_pred             -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---H
Confidence             222222    2247999999998777789999999997 99999987432 233333455655 88998887653   3


Q ss_pred             ccHHHHHHHHhccc
Q 019139          329 SQVPWLVDKYMKKV  342 (345)
Q Consensus       329 ~~~~~~~~~~~~g~  342 (345)
                      ..+.++++++.++.
T Consensus       286 ~~~~~~~~ll~~~~  299 (330)
T cd08245         286 ADLQEALDFAAEGK  299 (330)
T ss_pred             HHHHHHHHHHHcCC
Confidence            56777788777664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4e-35  Score=276.77  Aligned_cols=281  Identities=20%  Similarity=0.264  Sum_probs=222.8

Q ss_pred             cceeeeeeeeccCC-C-----CeEEEE---eecCC-CCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCc--ceeE
Q 019139            6 QVITCKAAVAWEPN-K-----PLVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG   73 (345)
Q Consensus         6 ~~~~~~a~~~~~~~-~-----~~~~~~---~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G   73 (345)
                      ++.+.|++++.+.. .     .|++.+   ++.|. +++||||||+.++++|+.|...+.+..+....|.++|+  |++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G   84 (348)
T PLN03154          5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG   84 (348)
T ss_pred             ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence            34567888886432 1     277777   46663 48999999999999999987644332222235889998  8899


Q ss_pred             EEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeE
Q 019139           74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT  153 (345)
Q Consensus        74 ~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~  153 (345)
                      +|+.+|++++.|++||+|+..                                                    |+|+||+
T Consensus        85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~  112 (348)
T PLN03154         85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS  112 (348)
T ss_pred             EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence            999999999999999999721                                                    2799999


Q ss_pred             Eeecce--EEE--cCCCCChh-hhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          154 VVHDVS--VAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       154 ~v~~~~--~~~--iP~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      .++.+.  +++  +|++++++ ++|++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+++|+ +|+++++
T Consensus       113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~  191 (348)
T PLN03154        113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG  191 (348)
T ss_pred             EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence            998753  544  59999986 688899999999999988889999999999998 9999999999999999 8999999


Q ss_pred             ChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce--
Q 019139          228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI--  304 (345)
Q Consensus       228 ~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~--  304 (345)
                      ++++.+.++ ++|++.++++.+. .++.+.+.+.+++++|++||++|+. .+..++++++++ |+++.+|..... .+  
T Consensus       192 ~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~  267 (348)
T PLN03154        192 SSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SLSA  267 (348)
T ss_pred             CHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CCCC
Confidence            999999887 7999999998641 3566777777666899999999975 599999999997 999999975422 22  


Q ss_pred             ---ecChhhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139          305 ---STRPFQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       305 ---~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~  343 (345)
                         .+++..++. ++++.|++.+.+.  ..+.+.++++++++|+.
T Consensus       268 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l  312 (348)
T PLN03154        268 SQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI  312 (348)
T ss_pred             CCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc
Confidence               134555665 9999998765432  12457788899988865

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.6e-35  Score=273.32  Aligned_cols=298  Identities=27%  Similarity=0.421  Sum_probs=237.4

Q ss_pred             eeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 019139           14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH   90 (345)
Q Consensus        14 ~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~   90 (345)
                      ++++.++ +.+++.|.|+++++||+||+.++++|++|+.... +..+.  ...|.++|+|++|+|+++|++++.|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            4566665 9999999999999999999999999999987763 33321  235789999999999999999999999999


Q ss_pred             EEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChh
Q 019139           91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD  170 (345)
Q Consensus        91 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~  170 (345)
                      |+..+...|+.|.+|..|+.+.|.+....   |....+              .+..|+|++|++++.+.++++|++++++
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~  143 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR  143 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccce---eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence            99999999999999999999999986431   110000              0123599999999999999999999999


Q ss_pred             hhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC
Q 019139          171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD  250 (345)
Q Consensus       171 ~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~  250 (345)
                      +|+. ..++.+||+++...... ++++|+|.|+|.+|++++|+|+.+|+.+++++++++++.++++++|+++++++++  
T Consensus       144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--  219 (339)
T cd08232         144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--  219 (339)
T ss_pred             Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence            9876 56888999988665556 8999999888999999999999999867889888899888999999999888765  


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccc
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRS  329 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~  329 (345)
                      .++. ... ...+++|+++|+.|+...+...+++|+++ |+++.+|...  ....+++..++. ++++.++..    ..+
T Consensus       220 ~~~~-~~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~  290 (339)
T cd08232         220 DPLA-AYA-ADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR----FDD  290 (339)
T ss_pred             hhhh-hhh-ccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----CHH
Confidence            2221 111 11236999999999766689999999997 9999998643  234455555554 888888752    235


Q ss_pred             cHHHHHHHHhccc
Q 019139          330 QVPWLVDKYMKKV  342 (345)
Q Consensus       330 ~~~~~~~~~~~g~  342 (345)
                      +++++++++++++
T Consensus       291 ~~~~~~~~~~~~~  303 (339)
T cd08232         291 EFAEAVRLLAAGR  303 (339)
T ss_pred             HHHHHHHHHHcCC
Confidence            6788888887775

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=4.2e-35  Score=275.59  Aligned_cols=279  Identities=22%  Similarity=0.278  Sum_probs=222.6

Q ss_pred             eeeeeeeccCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcce--eEEEEEeCC
Q 019139            9 TCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGE   80 (345)
Q Consensus         9 ~~~a~~~~~~~~-~~~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~~G~   80 (345)
                      -+|+++...++. .+++.+.+.    |+|++|||||||.|++||+.|+..+.|..+. ...|+++|++.  .|++..+|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            467777655554 389999988    8899999999999999999999988885433 24678899754  455556788


Q ss_pred             CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec-ce
Q 019139           81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS  159 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~  159 (345)
                      .++.|++||+|+..                                                    |+|+||+++|. ..
T Consensus        87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~  114 (338)
T cd08295          87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD  114 (338)
T ss_pred             CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence            88899999999721                                                    28999999999 79


Q ss_pred             EEEcC-CCCChh-hhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139          160 VAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK  236 (345)
Q Consensus       160 ~~~iP-~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~  236 (345)
                      ++++| +++++. +++++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK  193 (338)
T ss_pred             eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99995 678887 788999999999999888889999999999998 9999999999999999 8999999999999998


Q ss_pred             h-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc----eecChhhh
Q 019139          237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE----ISTRPFQL  311 (345)
Q Consensus       237 ~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~----~~~~~~~~  311 (345)
                      + +|++.++++.+. .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|.......    ..++...+
T Consensus       194 ~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~  270 (338)
T cd08295         194 NKLGFDDAFNYKEE-PDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI  270 (338)
T ss_pred             HhcCCceeEEcCCc-ccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence            8 999999986541 356677777765699999999998 5589999999997 99999997432111    01233444


Q ss_pred             cc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139          312 VT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       312 ~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~  343 (345)
                      +. ++++.|+....+..  .+.+.++++++++|+.
T Consensus       271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  305 (338)
T cd08295         271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKL  305 (338)
T ss_pred             hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCe
Confidence            44 88999876654322  2346778888887753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.5e-34  Score=270.46  Aligned_cols=296  Identities=27%  Similarity=0.375  Sum_probs=240.6

Q ss_pred             ccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEE
Q 019139           16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI   92 (345)
Q Consensus        16 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~   92 (345)
                      ++++.++++++.|.|.|.++||+||+.++++|+.|...+.+..   ...++|.++|+|++|+|+++|++++.+++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            4677789999999999999999999999999999998765532   1224577899999999999999999999999999


Q ss_pred             ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh
Q 019139           93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV  172 (345)
Q Consensus        93 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a  172 (345)
                      ..+...|+.|..|..+..+.|++...   .|+. .                  .|+|++|++++.+.++++|+++++.++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a  142 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYA  142 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcce---Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhh
Confidence            99999999999999999999998743   2221 2                  249999999999999999999998654


Q ss_pred             cccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCcc
Q 019139          173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP  252 (345)
Q Consensus       173 a~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  252 (345)
                       +++.++.+|++++  ....+++++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++..+  .+
T Consensus       143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~  217 (340)
T TIGR00692       143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--ED  217 (340)
T ss_pred             -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cC
Confidence             5667888998876  345678999999888999999999999999944888888889999999999988888765  56


Q ss_pred             HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChh-hhcc-ccEEEEeeecCCcccc
Q 019139          253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVT-GRVWKGTAFGGFKSRS  329 (345)
Q Consensus       253 ~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~~~~~~~  329 (345)
                      +.+.+.++.++ ++|++||++|+...+...+++|+++ |+++.+|.....  .+++.. .+.. ++++.++..  ....+
T Consensus       218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~  292 (340)
T TIGR00692       218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGK--VTIDFTNKVIFKGLTIYGITG--RHMFE  292 (340)
T ss_pred             HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCC--cccchhhhhhhcceEEEEEec--CCchh
Confidence            77778777766 8999999999877789999999997 999999975322  233222 3344 778877652  22235


Q ss_pred             cHHHHHHHHhcccc
Q 019139          330 QVPWLVDKYMKKVN  343 (345)
Q Consensus       330 ~~~~~~~~~~~g~~  343 (345)
                      .+.++++++++++.
T Consensus       293 ~~~~~~~~l~~~~l  306 (340)
T TIGR00692       293 TWYTVSRLIQSGKL  306 (340)
T ss_pred             hHHHHHHHHHcCCC
Confidence            56778888877753

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1e-34  Score=271.48  Aligned_cols=260  Identities=19%  Similarity=0.240  Sum_probs=209.9

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCC
Q 019139           22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE  101 (345)
Q Consensus        22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~  101 (345)
                      +++.++|.|+|++|||||||.|+++|+.|.   .|.++....|.++|.|++|+|++.|+   .|++||+|+..       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            888999999999999999999999999654   34333333578999999999999774   59999999731       


Q ss_pred             CccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc----CCCCChhhh-cccc
Q 019139          102 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG  176 (345)
Q Consensus       102 c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i----P~~l~~~~a-a~~~  176 (345)
                                                                   ++|++|+.++.+.+.++    |++++++++ ++++
T Consensus        86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~  120 (325)
T TIGR02825        86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG  120 (325)
T ss_pred             ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence                                                         16899999999888877    899999987 6788


Q ss_pred             cchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHH
Q 019139          177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ  255 (345)
Q Consensus       177 ~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  255 (345)
                      +++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++++. ..+.+
T Consensus       121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~  198 (325)
T TIGR02825       121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE  198 (325)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence            999999999888899999999999996 9999999999999999 89999999999999999999999988652 24555


Q ss_pred             HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC---Ccee--cChhhhcc-ccEEEEeeecCCc---
Q 019139          256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIS--TRPFQLVT-GRVWKGTAFGGFK---  326 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~~--~~~~~~~~-~~~i~g~~~~~~~---  326 (345)
                      .+...+++++|++||++|+.. +..++++++++ |+++.+|.....   ...+  ..+..+.. ++++.++....+.   
T Consensus       199 ~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  276 (325)
T TIGR02825       199 TLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV  276 (325)
T ss_pred             HHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence            565555558999999999865 79999999997 999999974321   1122  12333444 8899888754332   


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                      ..+.+.++++++++|+.
T Consensus       277 ~~~~~~~~~~l~~~g~l  293 (325)
T TIGR02825       277 RQKALKELLKWVLEGKI  293 (325)
T ss_pred             hHHHHHHHHHHHHCCCc
Confidence            12467888888888764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.3e-34  Score=270.64  Aligned_cols=272  Identities=19%  Similarity=0.207  Sum_probs=217.5

Q ss_pred             eeeeeeeccC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            9 TCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         9 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +||+|++.++  +.+    ++++++|.|+|++|||+|||.+++||+.|......   ...+|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            5899999983  333    88899999999999999999999999887653221   124688999999999995   44


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc---e
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S  159 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~  159 (345)
                      +.|++||+|+..                                                    ++|++|+.++.+   .
T Consensus        76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~  103 (329)
T cd08294          76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD  103 (329)
T ss_pred             CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence            679999999731                                                    178999999999   9


Q ss_pred             EEEcCCCCCh-----hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139          160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD  233 (345)
Q Consensus       160 ~~~iP~~l~~-----~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~  233 (345)
                      ++++|++++.     ..++++++++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus       104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~  182 (329)
T cd08294         104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA  182 (329)
T ss_pred             eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence            9999999982     2234678899999999888899999999999986 9999999999999999 8999999999999


Q ss_pred             HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCc-----eecCh
Q 019139          234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-----ISTRP  308 (345)
Q Consensus       234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-----~~~~~  308 (345)
                      +++++|+++++++++  .++.+.+.+++++++|++||++|+ ..+..++++++++ |+++.+|.......     .....
T Consensus       183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~  258 (329)
T cd08294         183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ  258 (329)
T ss_pred             HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence            999999999999876  567777877776689999999998 5589999999997 99999986321111     12223


Q ss_pred             hhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139          309 FQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       309 ~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~  343 (345)
                      ..++. ++++.++....+.  ..+.+.++++++++|++
T Consensus       259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i  296 (329)
T cd08294         259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKL  296 (329)
T ss_pred             HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCC
Confidence            33444 8899987654331  12346677888887764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-34  Score=271.41  Aligned_cols=290  Identities=25%  Similarity=0.277  Sum_probs=230.8

Q ss_pred             eeeeeeccCCCC--eEEEE-eecCCCCCCeEEEEEeeeecCccccccccCCCC--------------------CCCCCcc
Q 019139           10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI   66 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~   66 (345)
                      |||+++.+++.+  +.+.+ ++.|+|.+++|+|||.++++|++|++...|.++                    ..++|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888876643  55543 577788999999999999999999998877543                    2356889


Q ss_pred             cCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCc
Q 019139           67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT  146 (345)
Q Consensus        67 ~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~  146 (345)
                      +|||++|+|+++|+++++|++||+|+..+...|+.|..|.     .|..      .|.. .+                  
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~~------~~~~-~~------------------  130 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DIDY------IGSE-RD------------------  130 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cccc------cCCC-CC------------------
Confidence            9999999999999999999999999987777776665432     1211      1110 12                  


Q ss_pred             ceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139          147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI  225 (345)
Q Consensus       147 g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~  225 (345)
                      |+|++|+.++.+.++++|+++++.+++++++++.+||+++ ...+++++++|+|+|+ |++|++++++|+++|+ +++++
T Consensus       131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~  208 (350)
T cd08274         131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV  208 (350)
T ss_pred             ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence            3999999999999999999999999999999999999987 7788999999999998 9999999999999999 78888


Q ss_pred             cCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce
Q 019139          226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI  304 (345)
Q Consensus       226 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~  304 (345)
                      +.++ +.+.++++|++.+++..+  ....+  ...+.+ ++|++||++|+. .+..++++++++ |+++.+|... ....
T Consensus       209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~  280 (350)
T cd08274         209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGAIA-GPVV  280 (350)
T ss_pred             eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecccC-Cccc
Confidence            7665 788889999975554433  33333  445555 899999999985 489999999997 9999999642 2235


Q ss_pred             ecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          305 STRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       305 ~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ++++..++. ++++.|+....   .+.+.++++++.+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~  316 (350)
T cd08274         281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGE  316 (350)
T ss_pred             cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCC
Confidence            677777566 99999987643   367888888888775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3e-34  Score=270.27  Aligned_cols=221  Identities=20%  Similarity=0.287  Sum_probs=187.8

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeeeecCcccccccc---CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcC
Q 019139           22 LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA   97 (345)
Q Consensus        22 ~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~   97 (345)
                      ++++++|.|+|. +|||||||.|+|||+.|.....   +.....++|.++|||++|+|+++|++++.|++||+|+...  
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence            888999999874 9999999999999999864332   2111234678999999999999999999999999997310  


Q ss_pred             CCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhh----hc
Q 019139           98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC  173 (345)
Q Consensus        98 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~----aa  173 (345)
                                                                       ++|+||+++|.+.++++|+++++.+    ++
T Consensus       101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a  131 (345)
T cd08293         101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG  131 (345)
T ss_pred             -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence                                                             2799999999999999999864432    44


Q ss_pred             ccccchhhhhHHHHhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCC
Q 019139          174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH  249 (345)
Q Consensus       174 ~~~~~~~ta~~al~~~~~~~~g--~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~  249 (345)
                      +++.++.|||+++.+..+++++  ++|+|+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|++.++++.+ 
T Consensus       132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~-  210 (345)
T cd08293         132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT-  210 (345)
T ss_pred             hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence            5677899999998778888876  99999998 9999999999999998569999999999998876 99999998876 


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       .++.+.+.+++++++|++||++|+.. +..++++|+++ |+++.+|.
T Consensus       211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~  255 (345)
T cd08293         211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQ  255 (345)
T ss_pred             -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEee
Confidence             56778888877668999999999865 79999999997 99999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=3e-34  Score=269.71  Aligned_cols=282  Identities=24%  Similarity=0.317  Sum_probs=231.1

Q ss_pred             eeeeeeccCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCccccccccCCCCCC-C----CCcccCcceeEEEEEeCC
Q 019139           10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE   80 (345)
Q Consensus        10 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~~G~   80 (345)
                      |||+++.+++.+   +.+++.|.|+|.+ +||+||+.++|+|+.|...+.|..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            789999988875   8999999999888 999999999999999999988876432 2    677999999999999999


Q ss_pred             CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                      +++.+++||+|+....                              .                  .|+|++|+.++.+.+
T Consensus        81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence            9999999999985321                              0                  138999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHH
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA  235 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~  235 (345)
                      +++|+++++++++.+++++.|||+++.....++++++|+|+|+ |++|++++|+|++.|+ +++++.+++    ++.+.+
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~  191 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL  191 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence            9999999999999999999999999877788999999999987 9999999999999999 677776665    677888


Q ss_pred             HhcCCceEeCCCCC-CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-
Q 019139          236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-  313 (345)
Q Consensus       236 ~~~g~~~~i~~~~~-~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  313 (345)
                      +++|++.++++.+. ..++.+.+..+.++++|++||++|+.. +...+++++++ |+++.+|.... ....+++..++. 
T Consensus       192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~  268 (341)
T cd08290         192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFK  268 (341)
T ss_pred             HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhC
Confidence            89999999887651 015666677666558999999999865 77889999997 99999986432 244566655455 


Q ss_pred             ccEEEEeeecCCcc---c----ccHHHHHHHHhcccc
Q 019139          314 GRVWKGTAFGGFKS---R----SQVPWLVDKYMKKVN  343 (345)
Q Consensus       314 ~~~i~g~~~~~~~~---~----~~~~~~~~~~~~g~~  343 (345)
                      ++++.++.......   .    ..+.++++++.+|++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  305 (341)
T cd08290         269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL  305 (341)
T ss_pred             CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCc
Confidence            99999987654321   1    246777788877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.8e-34  Score=268.39  Aligned_cols=276  Identities=18%  Similarity=0.209  Sum_probs=223.1

Q ss_pred             eeeeeccC---CCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 019139           11 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus        11 ~a~~~~~~---~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      ||+++.++   +.+  +++.++|.|+|+++||+|||.++++|+.|...+.|..+...+|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57777775   443  7788899999999999999999999999999888866555678899999999999999999999


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ++||+|+....                           .. ..                  |+|++|++++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~  114 (336)
T TIGR02817        81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK  114 (336)
T ss_pred             CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence            99999974210                           00 12                  4899999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhc
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      ++++++++.+++++.|||+++....++++     +++|+|+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~  193 (336)
T TIGR02817       115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL  193 (336)
T ss_pred             CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence            99999999999999999999878888877     999999987 99999999999998 99 899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW  317 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  317 (345)
                      |+++++++..   ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++..     ..+++..+.. ++++
T Consensus       194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~  264 (336)
T TIGR02817       194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISL  264 (336)
T ss_pred             CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEE
Confidence            9999987643   4666666654448999999987767789999999997 999988532     2344444444 5777


Q ss_pred             EEeeecC--Ccc-------cccHHHHHHHHhccc
Q 019139          318 KGTAFGG--FKS-------RSQVPWLVDKYMKKV  342 (345)
Q Consensus       318 ~g~~~~~--~~~-------~~~~~~~~~~~~~g~  342 (345)
                      .+..+..  ...       ...+.++++++.+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  298 (336)
T TIGR02817       265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGK  298 (336)
T ss_pred             EEEEeecccccchhhhhhhHHHHHHHHHHHHCCC
Confidence            7644331  111       133677778887765

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.1e-33  Score=253.24  Aligned_cols=268  Identities=32%  Similarity=0.473  Sum_probs=222.1

Q ss_pred             eEEEEEeeeecCccccccccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCC
Q 019139           36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG  114 (345)
Q Consensus        36 eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~  114 (345)
                      ||+||+.++++|+.|+..+.|..+ ....|.++|+|++|+|+++|++++.|++||+|+..+...|+.|.+|+.    .|.
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999999988765 345688999999999999999999999999999999999999999997    665


Q ss_pred             CcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC
Q 019139          115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP  194 (345)
Q Consensus       115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~  194 (345)
                      .....   +.                   ...|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++
T Consensus        77 ~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  134 (271)
T cd05188          77 GGGIL---GE-------------------GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP  134 (271)
T ss_pred             CCCEe---cc-------------------ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence            44321   11                   112499999999999999999999999999999999999999877777799


Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG  273 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g  273 (345)
                      +++|+|+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+  .+..+.+. ...+ ++|+++|+++
T Consensus       135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~  210 (271)
T cd05188         135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG  210 (271)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence            9999999996699999999999998 8999999999999999999988887765  44555555 4444 8999999999


Q ss_pred             CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHH
Q 019139          274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKY  338 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~  338 (345)
                      +......++++++++ |+++.+|.......... ...++. ++++.|+..+.+   .+++++++++
T Consensus       211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  271 (271)
T cd05188         211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDD-LRRLLFKELTIIGSTGGTR---EDFEEALDLL  271 (271)
T ss_pred             CHHHHHHHHHhcccC-CEEEEEccCCCCCCccc-HHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence            855689999999997 99999997543322222 333444 999999987644   5777777653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=3.9e-33  Score=260.73  Aligned_cols=238  Identities=26%  Similarity=0.345  Sum_probs=210.9

Q ss_pred             eeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139            9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus         9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +||++++.+++.+  +++++++.|.|.++||+||+.++|+|++|+....|.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            4899999987764  88899999999999999999999999999999888776555788999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                              .                  .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence            9999973210                              1                  138999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++++++.+++++.+||.++.+..++.++++|+|+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++.+++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            9999999988899999998877888999999999976 9999999999999999 7999999999999999999988888


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      .++  .++.+.+.+++++ ++|++||++|+. .+...+++++++ |+++.+|...
T Consensus       192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~  242 (327)
T PRK10754        192 YRE--ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR-GLMVSFGNAS  242 (327)
T ss_pred             CCC--CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC-CEEEEEccCC
Confidence            765  5677788888887 899999999985 488899999997 9999999753

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1e-32  Score=257.03  Aligned_cols=279  Identities=24%  Similarity=0.277  Sum_probs=229.3

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |||+++.+++.+  +++.+.+.|.+.++||+||+.++++|+.|+....|..+.   ...|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689999876653  667777777789999999999999999999988876532   356789999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||+|+....                            . .+                  |+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~----------------------------~-~~------------------g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG----------------------------R-AG------------------GGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC----------------------------C-CC------------------ceeeEEEEEchHHeEeCC
Confidence            999999985320                            0 12                  399999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      +++++.+++++++++.||| ++....+++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus       114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            9999999999999999995 5667888999999999996 9999999999999999 89999999999999999999888


Q ss_pred             eCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++..+  .++.+.+.++.++ ++|+++|++|+.. ....+++++++ |+++.+|.... ....+++..++. ++++.++.
T Consensus       192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08244         192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASG-EWTALDEDDARRRGVTVVGLL  266 (324)
T ss_pred             EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCC-CCCccCHHHHhhCCcEEEEee
Confidence            88765  4667777777776 8999999999876 68999999997 99999997543 233556445455 99999887


Q ss_pred             ecCCcc---cccHHHHHHHHhccc
Q 019139          322 FGGFKS---RSQVPWLVDKYMKKV  342 (345)
Q Consensus       322 ~~~~~~---~~~~~~~~~~~~~g~  342 (345)
                      ......   .+.+.++++++.+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~~  290 (324)
T cd08244         267 GVQAERGGLRALEARALAEAAAGR  290 (324)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCC
Confidence            654321   244566777777664

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-33  Score=258.34  Aligned_cols=279  Identities=20%  Similarity=0.245  Sum_probs=229.6

Q ss_pred             eeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 019139            9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus         9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      +|||+++.+++..  +++.+.+.|++.++||+|||.++++|+.|.....|.++. ...|.++|+|++|+|+++|++++.+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            5999999988753  677788888889999999999999999999988876543 3456799999999999999999999


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ++||+|+...                               .+                  |+|++|++++.+.++++|+
T Consensus        81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~  111 (334)
T PTZ00354         81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ  111 (334)
T ss_pred             CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence            9999997421                               11                  3899999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      ++++.+++.+++++.+||+++.....++++++|+|+|+ |++|++++++|+++|+ .++.+++++++.+.++++|++.++
T Consensus       112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  190 (334)
T PTZ00354        112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI  190 (334)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999999877788999999999997 9999999999999999 677788899999999999998888


Q ss_pred             CCCCCCcc-HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-ccEEEEe
Q 019139          245 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT  320 (345)
Q Consensus       245 ~~~~~~~~-~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~g~  320 (345)
                      +...  .+ +.+.+.+.+++ ++|++||++++. .+..++++++++ |+++.+|...+ ..+. +++..++. ++++.++
T Consensus       191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  265 (334)
T PTZ00354        191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS  265 (334)
T ss_pred             ecCC--hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence            8765  33 66777777766 899999999874 588999999997 99999997532 3333 66666666 7799998


Q ss_pred             eecCCccc-------ccHHHHHHHHhccc
Q 019139          321 AFGGFKSR-------SQVPWLVDKYMKKV  342 (345)
Q Consensus       321 ~~~~~~~~-------~~~~~~~~~~~~g~  342 (345)
                      ........       +.+.+++++++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (334)
T PTZ00354        266 TLRSRSDEYKADLVASFEREVLPYMEEGE  294 (334)
T ss_pred             eccccchhhhHHHHHHHHHHHHHHHHCCC
Confidence            76542110       22356667776664

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.6e-32  Score=255.30  Aligned_cols=297  Identities=26%  Similarity=0.356  Sum_probs=240.2

Q ss_pred             eeeeeeccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++...+  +.+++++.+.|.++++||+||+.++++|++|+....|.++.. ..|.++|||++|+|+++|+.+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899999765  348888888888999999999999999999999888776432 4688999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+......|+.|.      .+.|....   +.|.                   +..|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~------~~~~~~~~---~~~~-------------------~~~g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          81 VGDRVVPTFFPNWLDGP------PTAEDEAS---ALGG-------------------PIDGVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             CCCEEEEeccccccccc------cccccccc---cccc-------------------ccCceeeeEEEecHHHeEECCCC
Confidence            99999976554444333      33443221   1121                   11248999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++.+++.+++++.+||+++.....++++++|+|+|+|++|++++++|++.|+ +|++++.++++.+.++++|++.+++.
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  211 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY  211 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence            99999999999999999998777889999999999889999999999999999 79999999999999988999988886


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      ... .++.+.+.+++++ ++|+++|++++. .+..++++++++ |+++.+|..... ...++...++. ++++.++..+.
T Consensus       212 ~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  287 (336)
T cd08276         212 RTT-PDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS  287 (336)
T ss_pred             Ccc-cCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc
Confidence            541 3566778888876 999999999864 488999999997 999999975432 23455556556 99999987654


Q ss_pred             CcccccHHHHHHHHhccc
Q 019139          325 FKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~  342 (345)
                         .+.+.++++++.++.
T Consensus       288 ---~~~~~~~~~l~~~~~  302 (336)
T cd08276         288 ---RAQFEAMNRAIEAHR  302 (336)
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               356777777776553

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=9.6e-33  Score=258.19  Aligned_cols=277  Identities=24%  Similarity=0.287  Sum_probs=226.1

Q ss_pred             eeeeeeeccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139            9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         9 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +|||+++.+++.    ++++++++.|.|.++||+||+.++++|+.|++...|.++. ..+|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            489999998765    4889999999999999999999999999999988887643 36788999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      .+++||+|+..                                .                  .|+|++|+.++.+.++++
T Consensus        81 ~~~~Gd~V~~~--------------------------------~------------------~g~~~s~~~v~~~~~~~i  110 (329)
T cd08250          81 DFKVGDAVATM--------------------------------S------------------FGAFAEYQVVPARHAVPV  110 (329)
T ss_pred             CCCCCCEEEEe--------------------------------c------------------CcceeEEEEechHHeEEC
Confidence            99999999842                                1                  138999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      |++  ..+++.+++++.+||+++.+..+++++++|+|+|+ |.+|++++|+|+..|+ +|+++++++++.+.++++|++.
T Consensus       111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  187 (329)
T cd08250         111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR  187 (329)
T ss_pred             CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence            997  35677888899999999877788999999999997 9999999999999999 7999889999999999999988


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC---------CceecChhhhcc
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---------QEISTRPFQLVT  313 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---------~~~~~~~~~~~~  313 (345)
                      +++..+  .++.+.+....++++|++||++|+ ..+...+++++++ |+++.+|.....         ....+++..+..
T Consensus       188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T cd08250         188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK  263 (329)
T ss_pred             EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence            887655  455566665554589999999997 4589999999997 999999875321         112233333334


Q ss_pred             ccEEEEeeecCCc--ccccHHHHHHHHhccc
Q 019139          314 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       314 ~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~  342 (345)
                      ++++.++.+..+.  ..+.+.++++++.++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (329)
T cd08250         264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGK  294 (329)
T ss_pred             CceEEEEEhHHHHHHHHHHHHHHHHHHHCCC
Confidence            8999998754332  1244667777777664

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=5.3e-32  Score=252.38  Aligned_cols=263  Identities=22%  Similarity=0.262  Sum_probs=213.3

Q ss_pred             eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++.  ++++++.|.|+|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++  +++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            78999999886  6999999999999999999999999999999998887643 245789999999999998  456899


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                        ..|+                   +..|+|++|++++.+.++++|++
T Consensus        79 ~Gd~V~~~~~------------------------~~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          79 EGDEVLVTGY------------------------DLGM-------------------NTDGGFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             CCCEEEEccc------------------------ccCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence            9999985321                        0111                   11249999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAK--VE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~--~~-~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +++.+++.+++++.+||.++....+  +. .+++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE  194 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence            9999999999999999998754433  35 3579999998 9999999999999999 7999999999999999999998


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      +++.++  . ..+.......+++|++||++|+. .+...+++++++ |+++.+|.... .+..+++..++. ++++.++.
T Consensus       195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (325)
T cd05280         195 VLDRED--L-LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG-GVVASCGNAAG-PELTTTVLPFILRGVSLLGID  268 (325)
T ss_pred             EEcchh--H-HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC-CEEEEEecCCC-CccccccchheeeeeEEEEEE
Confidence            887654  1 11222223334899999999985 599999999997 99999997532 233566666644 99999987


Q ss_pred             ecC
Q 019139          322 FGG  324 (345)
Q Consensus       322 ~~~  324 (345)
                      ...
T Consensus       269 ~~~  271 (325)
T cd05280         269 SVN  271 (325)
T ss_pred             eec
Confidence            654

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=5.8e-32  Score=253.51  Aligned_cols=278  Identities=19%  Similarity=0.183  Sum_probs=226.8

Q ss_pred             eeeeeeccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139           10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus        10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |||+++++++++     ++.+++|.|++.+++|+||+.++++|+.|+..+.+..+...+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            579999988763     666778888889999999999999999999988776654456779999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||+|+.....                            ..+                  |+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~~----------------------------~~~------------------g~~~~~~~v~~~~~~~ip  114 (336)
T cd08252          81 FKVGDEVYYAGDI----------------------------TRP------------------GSNAEYQLVDERIVGHKP  114 (336)
T ss_pred             CCCCCEEEEcCCC----------------------------CCC------------------ccceEEEEEchHHeeeCC
Confidence            9999999842110                            012                  389999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~  237 (345)
                      +++++.+++.+++++.+||+++.+...+.+     +++|+|+|+ |++|++++|+|+.+| + +|+++++++++.+++++
T Consensus       115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~  193 (336)
T cd08252         115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE  193 (336)
T ss_pred             CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence            999999999999999999998877788877     999999986 999999999999999 7 89999999999999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      +|++.+++..+   ++.+.+.....+++|++||++|+...+..++++++++ |+++.+|...    ..+++..++. +++
T Consensus       194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~  265 (336)
T cd08252         194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSAS  265 (336)
T ss_pred             cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccce
Confidence            99988887653   3555555443348999999999766799999999997 9999998642    3445555544 888


Q ss_pred             EEEeeecCCc--c-------cccHHHHHHHHhccc
Q 019139          317 WKGTAFGGFK--S-------RSQVPWLVDKYMKKV  342 (345)
Q Consensus       317 i~g~~~~~~~--~-------~~~~~~~~~~~~~g~  342 (345)
                      +.++.+....  .       .+.+.++++++.+|+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (336)
T cd08252         266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGK  300 (336)
T ss_pred             EEEEEeeccccccccchhhHHHHHHHHHHHHHCCC
Confidence            8887654321  1       133667788887775

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=7.5e-32  Score=253.63  Aligned_cols=243  Identities=28%  Similarity=0.360  Sum_probs=205.8

Q ss_pred             eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++ ..+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|+|++|+|+.+|++++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            6899999885 348899999999999999999999999999998876554 22356799999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+......|+                      +                   ....|+|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~  118 (339)
T cd08249          80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS  118 (339)
T ss_pred             CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence            999865432111                      0                   01124999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~----------~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      +.+++.+++++.+||+++.+..++          .++++|+|+|+ |++|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus       119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~  196 (339)
T cd08249         119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS  196 (339)
T ss_pred             HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence            999999999999999988665544          78999999998 9999999999999999 788876 4588888899


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc--CCeEEEEeccCC
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAA  299 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~--~~G~~v~~G~~~  299 (345)
                      +|++.+++..+  .++.+.+.+++++++|++||++|++..+..+++++++  + |+++.+|...
T Consensus       197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~  257 (339)
T cd08249         197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVP  257 (339)
T ss_pred             cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCC
Confidence            99999988865  5677777777766899999999985669999999999  9 9999998753

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-31  Score=247.58  Aligned_cols=269  Identities=24%  Similarity=0.287  Sum_probs=218.7

Q ss_pred             ccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-cCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCEEE
Q 019139           16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVI   92 (345)
Q Consensus        16 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~   92 (345)
                      ++++. +++++++.|++.++||+||+.++++|+.|...+ .|..+.  +..|.++|+|++|+|+++|++++.+++||+|+
T Consensus         2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            34444 999999999999999999999999999999887 665422  23478999999999999999999999999998


Q ss_pred             ecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh
Q 019139           93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV  172 (345)
Q Consensus        93 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a  172 (345)
                      ...                                                  .|+|++|+.++.+.++++|+++  ..+
T Consensus        81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~  108 (312)
T cd08269          81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ  108 (312)
T ss_pred             Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence            431                                                  1389999999999999999998  233


Q ss_pred             cccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCcc
Q 019139          173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP  252 (345)
Q Consensus       173 a~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  252 (345)
                      +....++.++++++. ..+++++++|+|+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++.+.  .+
T Consensus       109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~  185 (312)
T cd08269         109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EA  185 (312)
T ss_pred             HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cC
Confidence            322367888998874 788899999999988999999999999999943999999999999999999988887654  56


Q ss_pred             HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC-cccc
Q 019139          253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF-KSRS  329 (345)
Q Consensus       253 ~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~-~~~~  329 (345)
                      +.+.+.+++.+ ++|+++|++|+.......+++++++ |+++.+|... .....+++..+.. ++++.++..... ...+
T Consensus       186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (312)
T cd08269         186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE  263 (312)
T ss_pred             HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence            77788888776 9999999998877789999999997 9999999753 3345556555555 888887754332 2236


Q ss_pred             cHHHHHHHHhccc
Q 019139          330 QVPWLVDKYMKKV  342 (345)
Q Consensus       330 ~~~~~~~~~~~g~  342 (345)
                      .+.++++++++++
T Consensus       264 ~~~~~~~~~~~~~  276 (312)
T cd08269         264 GMREAVKLIADGR  276 (312)
T ss_pred             HHHHHHHHHHcCC
Confidence            7888888888775

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-31  Score=247.42  Aligned_cols=266  Identities=21%  Similarity=0.221  Sum_probs=216.0

Q ss_pred             eeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      ||++++.+++ ..+++++.|.|.+.++||+||+.++++|+.|.+...+.    ..|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            6889988754 12667788999999999999999999999999876521    235789999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+...                               .+                  |+|++|+.++.+.++++|++++
T Consensus        77 d~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~~  107 (305)
T cd08270          77 ARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGVS  107 (305)
T ss_pred             CEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCCC
Confidence            9997421                               12                  3999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +.+++++++++.+||+++...... ++++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++..++..
T Consensus       108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  185 (305)
T cd08270         108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG  185 (305)
T ss_pred             HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence            999999999999999988665555 5999999998 9999999999999999 899999999999999999987655432


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc---ccEEEEeeecC
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFGG  324 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~---~~~i~g~~~~~  324 (345)
                      +          ++.++++|+++|++|+.. ....+++++++ |+++.+|... .....+++..+..   ++++.++.+..
T Consensus       186 ~----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
T cd08270         186 S----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYD  252 (305)
T ss_pred             c----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccC
Confidence            2          122247999999999864 89999999997 9999999754 3345566666554   88999987664


Q ss_pred             -CcccccHHHHHHHHhcccc
Q 019139          325 -FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 -~~~~~~~~~~~~~~~~g~~  343 (345)
                       ....+.+..++++++++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~i  272 (305)
T cd08270         253 GEPLAADLARLLGLVAAGRL  272 (305)
T ss_pred             HHHHHHHHHHHHHHHHCCCc
Confidence             1123556777777777654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.3e-31  Score=249.44  Aligned_cols=266  Identities=20%  Similarity=0.306  Sum_probs=225.3

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCC
Q 019139           22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR  100 (345)
Q Consensus        22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~  100 (345)
                      +.+++.|.|++.+++|+||+.++++|+.|...+.|..+. ...|.++|+|++|+|+++|++++.+++||+|+..+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888899999999999999999999988776543 346789999999999999999999999999985320    


Q ss_pred             CCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchh
Q 019139          101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP  180 (345)
Q Consensus       101 ~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~  180 (345)
                                                 +                  |+|++|+.++.+.++++|+++++.+++.++++..
T Consensus        90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~  124 (323)
T cd05282          90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL  124 (323)
T ss_pred             ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence                                       2                  3899999999999999999999999999999999


Q ss_pred             hhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHh
Q 019139          181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       181 ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      +||+++.....+.++++|+|+|+ |.+|++++|+|+++|+ .++++.+++++.+.++++|++.++++.+  .++.+.+.+
T Consensus       125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~  201 (323)
T cd05282         125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE  201 (323)
T ss_pred             HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence            99999888888899999999988 9999999999999999 7888888899999999999999998865  456777888


Q ss_pred             hcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-cccEEEEeeecCCcc-------ccc
Q 019139          260 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ  330 (345)
Q Consensus       260 ~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~  330 (345)
                      ++.+ ++|++||++|+.. ....+++++++ |+++.+|..... ...+++..+. +++++.++.+..+..       .+.
T Consensus       202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd05282         202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET  278 (323)
T ss_pred             HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence            8777 9999999999866 67889999997 999999975432 4566777766 499999988765421       134


Q ss_pred             HHHHHHHHhccc
Q 019139          331 VPWLVDKYMKKV  342 (345)
Q Consensus       331 ~~~~~~~~~~g~  342 (345)
                      +.++++++.+++
T Consensus       279 ~~~~~~~l~~~~  290 (323)
T cd05282         279 FAEVIKLVEAGV  290 (323)
T ss_pred             HHHHHHHHhCCC
Confidence            666777777765

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.9e-31  Score=246.40  Aligned_cols=280  Identities=25%  Similarity=0.388  Sum_probs=222.7

Q ss_pred             eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ||++++...+.  .+++.+.+.|.+.++||+||+.++++|+.|+....|..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            67888887664  367778888888999999999999999999999888765556688999999999999995  57999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+.....                        .|.. .+                  |+|++|+.++.+.++++|+++
T Consensus        79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~  115 (320)
T cd08243          79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL  115 (320)
T ss_pred             CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence            9999854210                        0000 12                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++.+++.+++++.+||+++.....++++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.+++.
T Consensus       116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  194 (320)
T cd08243         116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID  194 (320)
T ss_pred             CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence            999999999999999999888788999999999998 9999999999999999 79999999999999999999887754


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce-ecChhhhc--c-ccEEEEeee
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQLV--T-GRVWKGTAF  322 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~--~-~~~i~g~~~  322 (345)
                       .  .++.+.+.++ +.++|+++|++|+. .+...+++++++ |+++.+|........ ......+.  . ++++.++..
T Consensus       195 -~--~~~~~~i~~~-~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         195 -D--GAIAEQLRAA-PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             -C--ccHHHHHHHh-CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence             2  3566677777 45999999999984 589999999997 999999974322111 12222222  3 788877754


Q ss_pred             cCCcccccHHHHHHHHhccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ... ....+.+++++++++.
T Consensus       269 ~~~-~~~~~~~~~~~~~~~~  287 (320)
T cd08243         269 GDV-PQTPLQELFDFVAAGH  287 (320)
T ss_pred             hhh-hHHHHHHHHHHHHCCc
Confidence            322 1235667777776664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=2.1e-31  Score=248.75  Aligned_cols=261  Identities=20%  Similarity=0.257  Sum_probs=209.5

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+.+++  +++++.|.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.|  ++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            789999988764  7889999999999999999999999999987664322 122458899999999999954  46799


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                        ..|.. .+                  |+|++|++++.+.++++|++
T Consensus        79 ~Gd~V~~~~~------------------------~~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          79 PGDEVIVTSY------------------------DLGVS-HH------------------GGYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CCCEEEEccc------------------------ccCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence            9999985421                        01111 22                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhh--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~--~~-~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +++.+++.+++++.|||.++...  .. ...+++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE  194 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence            99999999999999998877432  22 345789999998 9999999999999999 8999999999999999999988


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      +++.++  . ..+.+.++.++++|++||++|+ ..+...+++++++ |+++.+|... ....++++..++. ++++.++.
T Consensus       195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08289         195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGID  268 (326)
T ss_pred             EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEE
Confidence            888764  2 2445555554489999999998 4589999999997 9999999753 3334555556645 99999975


Q ss_pred             e
Q 019139          322 F  322 (345)
Q Consensus       322 ~  322 (345)
                      .
T Consensus       269 ~  269 (326)
T cd08289         269 S  269 (326)
T ss_pred             e
Confidence            3

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.4e-31  Score=246.30  Aligned_cols=260  Identities=24%  Similarity=0.286  Sum_probs=209.7

Q ss_pred             eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ||+++...+.+  ++++++|.|.+.++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+.  ++++.|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            67888877663  689999999999999999999999999999988887643 25688999999999998  55678999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+.....                        .|.. .+                  |+|++|+.+|.+.++++|+++
T Consensus        79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~  115 (323)
T TIGR02823        79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL  115 (323)
T ss_pred             CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence            9999854310                        1110 12                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHh--hcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          168 PLDKVCLLGCGVPTGLGAVWN--TAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~--~~~~~~g~-~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      ++.+++.+++.+.+|+.++..  ...+.+++ +|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.++++|++.+
T Consensus       116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~  194 (323)
T TIGR02823       116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV  194 (323)
T ss_pred             CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence            999999999999999877633  33478898 9999998 9999999999999999 78888888888899999999888


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      ++.++  .+  ..+..+..+++|+++|++|+.. +...+++++++ |+++.+|... ....+++...++. ++++.++..
T Consensus       195 ~~~~~--~~--~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  267 (323)
T TIGR02823       195 IDRED--LS--PPGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGIDS  267 (323)
T ss_pred             Ecccc--HH--HHHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEec
Confidence            87654  22  2344455557999999999864 88999999997 9999999753 3344555455545 999999764


Q ss_pred             c
Q 019139          323 G  323 (345)
Q Consensus       323 ~  323 (345)
                      .
T Consensus       268 ~  268 (323)
T TIGR02823       268 V  268 (323)
T ss_pred             c
Confidence            3

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=3e-30  Score=239.01  Aligned_cols=278  Identities=24%  Similarity=0.310  Sum_probs=227.8

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+.+.+  +++.+.+.|.+.++||+||+.++++|+.|+....|.++. ..+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            789999876543  777788888889999999999999999999888776543 25678999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+...                               .+                  |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence            999997421                               11                  38999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.++.++.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ .++++++++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN  190 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877788999999999997 9999999999999999 7999999999999999999888877


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ...  .++.+.+.+...+ ++|+++|++|+.. +...+++++++ |+++.+|..+. ....+++..++. ++++.++...
T Consensus       191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd05276         191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGG-AKAELDLAPLLRKRLTLTGSTLR  265 (323)
T ss_pred             CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCC-CCCCCchHHHHHhCCeEEEeecc
Confidence            765  4566667666665 8999999999866 88899999997 99999987532 234566666655 9999998765


Q ss_pred             CCccc-------ccHHHHHHHHhccc
Q 019139          324 GFKSR-------SQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~-------~~~~~~~~~~~~g~  342 (345)
                      .....       ..+.++++++.+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05276         266 SRSLEEKAALAAAFREHVWPLFASGR  291 (323)
T ss_pred             chhhhccHHHHHHHHHHHHHHHHCCC
Confidence            43111       12355666666554

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.98  E-value=6.1e-31  Score=248.05  Aligned_cols=235  Identities=24%  Similarity=0.315  Sum_probs=197.9

Q ss_pred             eeeeeeccCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCC---------------CCCCCcccCcc
Q 019139           10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE   70 (345)
Q Consensus        10 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e   70 (345)
                      |||+++.+++++   +++++++.|+| .++||+||+.++++|++|.....|...               ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            789998888875   88999999999 499999999999999999998877421               23568899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139           71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS  150 (345)
Q Consensus        71 ~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a  150 (345)
                      ++|+|+++|++++++++||+|+.....                                              +..|+|+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~  114 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA  114 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence            999999999999999999999853210                                              1124999


Q ss_pred             eeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 019139          151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI  225 (345)
Q Consensus       151 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~  225 (345)
                      +|+.++.+.++++|+++++.+++.+++++.+||+++.+...+.+    |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~  193 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT  193 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence            99999999999999999999999999999999999877777654    999999996 9999999999999999 78887


Q ss_pred             cCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       226 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .++ ++.+.++++|++.+++..+  .++.+.+...  +++|++||++|+. .....+++++++ |+++.+|..
T Consensus       194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~  259 (350)
T cd08248         194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSP  259 (350)
T ss_pred             eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCC
Confidence            655 5778889999988887754  3444444321  3899999999986 589999999997 999999864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.98  E-value=5.2e-30  Score=239.06  Aligned_cols=279  Identities=18%  Similarity=0.225  Sum_probs=217.0

Q ss_pred             eeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.++|.  .++++++|.|.|+++||+||+.++++|+.|...+.|.++. ..+|.++|||++|+|++  ++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999998775  4889999999999999999999999999999988776532 24578899999999999  7777899


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+.....                        .|                   .+..|+|++|++++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~-------------------~~~~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          79 PGDRVVLTGWG------------------------VG-------------------ERHWGGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             CCCEEEECCcc------------------------CC-------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence            99999853210                        00                   011248999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHH--hhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~--~~~~~~-~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +++++++.+++++++++.++.  ...... ++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~  194 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE  194 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999999999887653  223444 6789999998 9999999999999999 7999889999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++++++    ....+..+..+++|.++|++++. .....+..++.+ |+++.+|... ..++.+++..++. ++++.|+.
T Consensus       195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~-g~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (324)
T cd08288         195 IIDRAE----LSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYG-GAVAACGLAG-GADLPTTVMPFILRGVTLLGID  267 (324)
T ss_pred             EEEcch----hhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCC-CEEEEEEecC-CCCCCcchhhhhccccEEEEEE
Confidence            888764    22245555555789999999974 477888899997 9999999753 2334455555544 99999976


Q ss_pred             ecCCcc---cccHHHHHHHHhcc
Q 019139          322 FGGFKS---RSQVPWLVDKYMKK  341 (345)
Q Consensus       322 ~~~~~~---~~~~~~~~~~~~~g  341 (345)
                      +.....   .+.+..+.+++.++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~  290 (324)
T cd08288         268 SVMAPIERRRAAWARLARDLDPA  290 (324)
T ss_pred             eecccchhhHHHHHHHHHHHhcC
Confidence            433221   12344455555554

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.98  E-value=6.4e-30  Score=237.17  Aligned_cols=263  Identities=27%  Similarity=0.381  Sum_probs=219.7

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      ||++++..++.+  +.++++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            578888876543  778899999999999999999999999999988776542 35788999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                          |....                  .|++++|+.++.+.++++|++
T Consensus        81 ~Gd~v~~~~~--------------------------~~~~~------------------~g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          81 VGDRVWLTNL--------------------------GWGRR------------------QGTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             CCCEEEEecc--------------------------ccCCC------------------CcceeeEEEecHHHcEeCCCC
Confidence            9999986431                          00001                  248999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.+++++.+||+++....++.++++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN  195 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877788999999999997 9999999999999999 8999999999999999999988887


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ...  .++.+.+.+...+ ++|+++|++++.. ....+++++++ |+++.+|...  ....+++..++. +.++.+....
T Consensus       196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd08253         196 YRA--EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLY  269 (325)
T ss_pred             CCC--cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehh
Confidence            765  4566677777665 8999999999865 78889999997 9999999754  234455555445 8888887643

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=8.9e-30  Score=235.48  Aligned_cols=276  Identities=28%  Similarity=0.364  Sum_probs=223.4

Q ss_pred             eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      ||+.+..++.+  +.+.+.+.|.+.++||+|||.++++|+.|+....+.++. .+|.++|||++|+|+.+|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            46666655543  666777777789999999999999999999988876643 457789999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+...                               ..                  |+|++|+.++.+.++++|++++
T Consensus        80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~  110 (320)
T cd05286          80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS  110 (320)
T ss_pred             CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence            9998421                               01                  3899999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +.+++.+++...++++++.+..++.++++|+|+|+ |++|++++++|+.+|+ .|++++.++++.+.++++|++.+++..
T Consensus       111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  189 (320)
T cd05286         111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR  189 (320)
T ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence            99999999999999999888888999999999996 9999999999999999 899999999999999999998888766


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      +  .++.+.+..++.+ ++|+++|++++. .....+++++++ |+++.+|.... ....+++..+.. ++++.++....+
T Consensus       190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  264 (320)
T cd05286         190 D--EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASG-PVPPFDLLRLSKGSLFLTRPSLFHY  264 (320)
T ss_pred             c--hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCC-CCCccCHHHHHhcCcEEEEEehhhh
Confidence            5  4566777777766 899999999985 588999999997 99999997432 233455555534 888876654333


Q ss_pred             cc-c----ccHHHHHHHHhccc
Q 019139          326 KS-R----SQVPWLVDKYMKKV  342 (345)
Q Consensus       326 ~~-~----~~~~~~~~~~~~g~  342 (345)
                      .. .    +.+.++++++.+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~  286 (320)
T cd05286         265 IATREELLARAAELFDAVASGK  286 (320)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCC
Confidence            21 1    22345667776654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=7.2e-30  Score=238.64  Aligned_cols=275  Identities=21%  Similarity=0.253  Sum_probs=216.6

Q ss_pred             eeeeeeccCC------CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---CCCCCCcccCcceeEEEEEeCC
Q 019139           10 CKAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus        10 ~~a~~~~~~~------~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      .|||++.+.+      +.++++++|.|++.+++|+||+.++++|+.|.....+..   ++...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            4677776433      128899999999999999999999999998765554432   1112356899999999999996


Q ss_pred             CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec-ce
Q 019139           81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS  159 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~  159 (345)
                      .  .+++||+|+..                                                    ++|++|+.++. +.
T Consensus        82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~  107 (329)
T cd05288          82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG  107 (329)
T ss_pred             C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence            4  79999999731                                                    17999999999 99


Q ss_pred             EEEcCCCCC--hhhhcc-cccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          160 VAKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       160 ~~~iP~~l~--~~~aa~-~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      ++++|++++  +.++++ +++++.+||+++.....+.++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus       108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~  186 (329)
T cd05288         108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL  186 (329)
T ss_pred             cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            999999995  445555 88899999999877788899999999996 9999999999999999 899999999999999


Q ss_pred             Hh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce----ecChhh
Q 019139          236 KN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQ  310 (345)
Q Consensus       236 ~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~----~~~~~~  310 (345)
                      ++ +|++.++++++  .++.+.+.+..++++|++||++|+. .+..++++++++ |+++.+|........    .++...
T Consensus       187 ~~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (329)
T cd05288         187 VEELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN  262 (329)
T ss_pred             HhhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence            88 99998888875  4566677777656899999999984 589999999997 999999975432111    123344


Q ss_pred             hcc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139          311 LVT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       311 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~  343 (345)
                      ++. ++++.++.+.....  .+.+.++++++.+|++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  298 (329)
T cd05288         263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKL  298 (329)
T ss_pred             HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCc
Confidence            445 89999887654321  2446777788877753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=1.4e-30  Score=242.87  Aligned_cols=222  Identities=31%  Similarity=0.489  Sum_probs=183.4

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC----CCCcccCcceeEEEEE---eC-CCCCCCCCCCEEEe
Q 019139           22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----LFPCILGHEAAGIVES---VG-EGVTEVQPGDHVIP   93 (345)
Q Consensus        22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~Vv~---~G-~~v~~~~~Gd~V~~   93 (345)
                      ...++.++|.|.+++++|++.++++|+.|+.++.|.+.+.    .+|.+++.++.|++..   .| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            5568889999999999999999999999999999988654    4775566665555433   33 22234555555542


Q ss_pred             cCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhc
Q 019139           94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC  173 (345)
Q Consensus        94 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa  173 (345)
                      .                                                 ...|+|+||+++|...++++|+++++.+||
T Consensus       100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence            2                                                 122499999999999999999999999999


Q ss_pred             ccccchhhhhHHHHhhc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       174 ~~~~~~~ta~~al~~~~------~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++.++.|||.++....      +.++|+.|||+|+ |++|++++|+|+..|+ ..+++.+++++.++++++|+++++|+
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999999999      8999999999987 9999999999999995 56666799999999999999999999


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ++  .++.+.+.+.+++++|+||||+|++. ....+.++... |+...++.
T Consensus       210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~  256 (347)
T KOG1198|consen  210 KD--ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGL  256 (347)
T ss_pred             CC--HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEe
Confidence            98  78889999988449999999999965 77777888875 65444443

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=9.2e-30  Score=224.38  Aligned_cols=264  Identities=22%  Similarity=0.242  Sum_probs=209.4

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeC--CCCCCCCCCCEEEecCcCCC
Q 019139           22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC   99 (345)
Q Consensus        22 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G--~~v~~~~~Gd~V~~~~~~~~   99 (345)
                      |+++++++|+|++||||+|++|.|+++...- +-...+.--.|.-+|...+|.++...  |..+.|++||.|...     
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence            9999999999999999999999999873221 21112222345666666655554432  567889999999732     


Q ss_pred             CCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhh--ccccc
Q 019139          100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGC  177 (345)
Q Consensus       100 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a--a~~~~  177 (345)
                                                                     .+|++|..++.+.+.+++++.-+..+  ..+..
T Consensus       101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm  133 (340)
T COG2130         101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM  133 (340)
T ss_pred             -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence                                                           18999999999999999865433222  23667


Q ss_pred             chhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHH
Q 019139          178 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ  255 (345)
Q Consensus       178 ~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~  255 (345)
                      +..|||.+|.+.++.++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|.++|++.  +++.+
T Consensus       134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~  210 (340)
T COG2130         134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ  210 (340)
T ss_pred             chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence            89999999999999999999999988 9999999999999999 99999999999999987 99999999998  68999


Q ss_pred             HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC---C-CceecCh-hhhcc-ccEEEEeeecCCc-cc
Q 019139          256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---G-QEISTRP-FQLVT-GRVWKGTAFGGFK-SR  328 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~-~~~~~~~-~~~~~-~~~i~g~~~~~~~-~~  328 (345)
                      .+.+..+.|+|+.||++|++. ++..+..|+.. +|++.||.-+.   . .+...+. ..++. .++++|+...+.. .+
T Consensus       211 ~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~  288 (340)
T COG2130         211 ALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR  288 (340)
T ss_pred             HHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence            999999999999999999966 99999999997 99999996431   1 1111222 23344 8999999984332 22


Q ss_pred             --ccHHHHHHHHhcccc
Q 019139          329 --SQVPWLVDKYMKKVN  343 (345)
Q Consensus       329 --~~~~~~~~~~~~g~~  343 (345)
                        +-.+++..++++|++
T Consensus       289 ~~e~~~~l~~wv~~GKi  305 (340)
T COG2130         289 FPEALRELGGWVKEGKI  305 (340)
T ss_pred             hHHHHHHHHHHHHcCce
Confidence              456788889998876

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.2e-29  Score=235.84  Aligned_cols=278  Identities=24%  Similarity=0.317  Sum_probs=224.9

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++.+  +.+++.+.|++.+++|+|++.++++|++|.....+.... ...|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999988765  778888888889999999999999999999988776542 24578999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                          |+...                  .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence            9999985321                          00001                  248999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.++.++.+||+++.+..+++++++++|+|+ |++|++++++|+.+|+ .|++++++ ++.+.++++|++.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~  194 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY  194 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence            9999999999999999998888899999999999986 9999999999999999 78888887 8888889999988887


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  324 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  324 (345)
                      ...  . +.+.+.+.+.+ ++|+++|++++.. +...+++++++ |+++.+|...   ..++.... .+++++.++.+..
T Consensus       195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~~-~~~~~~~~~~~~~  265 (326)
T cd08272         195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPLS-FRNATYSGVFTLL  265 (326)
T ss_pred             cch--h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhHh-hhcceEEEEEccc
Confidence            755  4 66777877777 8999999999854 88899999997 9999998642   22333221 2388888876432


Q ss_pred             --Cc------ccccHHHHHHHHhccc
Q 019139          325 --FK------SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       325 --~~------~~~~~~~~~~~~~~g~  342 (345)
                        ..      ..+.+.++++++.+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~l~~~~  291 (326)
T cd08272         266 PLLTGEGRAHHGEILREAARLVERGQ  291 (326)
T ss_pred             ccccccchhhHHHHHHHHHHHHHCCC
Confidence              10      1244666777776654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.9e-29  Score=234.65  Aligned_cols=237  Identities=27%  Similarity=0.385  Sum_probs=204.1

Q ss_pred             eeeeeeccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |||+++.+++  ..+.+++.|.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7999999988  35999999999999999999999999999999888776543334778999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+.....                           . .                  .|+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~---------------------------~-~------------------~~~~~s~~~~~~~~~~~ip~~~  114 (325)
T cd08271          81 GDRVAYHASL---------------------------A-R------------------GGSFAEYTVVDARAVLPLPDSL  114 (325)
T ss_pred             CCEEEeccCC---------------------------C-C------------------CccceeEEEeCHHHeEECCCCC
Confidence            9999853210                           0 1                  1389999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++.+++.+.+++.+|++++.+...+.++++++|+|+ |++|++++++++..|+ .++++. ++++.+.++++|++.+++.
T Consensus       115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~  192 (325)
T cd08271         115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY  192 (325)
T ss_pred             CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence            999999999999999999888888999999999998 8999999999999999 777776 6677788888999888876


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ..  .++.+.+.++..+ ++|++++++++.. ....+++++++ |+++.+|..
T Consensus       193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~  241 (325)
T cd08271         193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGR  241 (325)
T ss_pred             CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCC
Confidence            65  4566677777766 8999999999866 66789999997 999999754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=3e-29  Score=236.98  Aligned_cols=240  Identities=23%  Similarity=0.295  Sum_probs=193.7

Q ss_pred             eeeeeccCCCCeEEEEeecCCC---CCCeEEEEEeeeecCccccccccCCCCCCC-CCcccCcceeEEEEEeCCCCC-CC
Q 019139           11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVT-EV   85 (345)
Q Consensus        11 ~a~~~~~~~~~~~~~~~~~p~~---~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~Vv~~G~~v~-~~   85 (345)
                      |++++.+++.++++++++.|.|   +++||+||+.++++|++|+..+.+...... .|.++|+|++|+|+++|++++ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6899999988888888888876   899999999999999999887754322222 377899999999999999998 89


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc----eEE
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA  161 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~  161 (345)
                      ++||+|+......++                          .                  .|+|++|++++.+    .++
T Consensus        82 ~~Gd~V~~~~~~~~~--------------------------~------------------~g~~~~~~~v~~~~~~~~~~  117 (352)
T cd08247          82 KVGDEVCGIYPHPYG--------------------------G------------------QGTLSQYLLVDPKKDKKSIT  117 (352)
T ss_pred             CCCCEEEEeecCCCC--------------------------C------------------CceeeEEEEEccccccceeE
Confidence            999999864321110                          1                  2499999999987    789


Q ss_pred             EcCCCCChhhhcccccchhhhhHHHHhhc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhc
Q 019139          162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~  238 (345)
                      ++|+++++.+++.+++++.|||+++.... ++++|++|+|+|+ |++|++++|+|+++|. +.++++.+ +++.+.++++
T Consensus       118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~  196 (352)
T cd08247         118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL  196 (352)
T ss_pred             ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence            99999999999999999999999887666 7999999999998 8999999999999854 35666654 5556678899


Q ss_pred             CCceEeCCCCCCc--cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc---cCCeEEEEec
Q 019139          239 GVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVG  296 (345)
Q Consensus       239 g~~~~i~~~~~~~--~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~---~~~G~~v~~G  296 (345)
                      |++.+++..+...  .+.+.+...+++ ++|++||++|+...+..++++++   ++ |+++.++
T Consensus       197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~  259 (352)
T cd08247         197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV  259 (352)
T ss_pred             CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence            9998888765211  233334444424 89999999998666889999999   97 9999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.2e-29  Score=233.51  Aligned_cols=231  Identities=26%  Similarity=0.352  Sum_probs=197.2

Q ss_pred             eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ||+++...+.+  +++++.+.|.|.++||+||+.++++|+.|+.++.|..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            78888877654  888888999999999999999999999999988877643 256889999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+...                               ..                  |+|++|+.++.+.++++|+++
T Consensus        82 Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~  112 (331)
T cd08273          82 GDRVAALT-------------------------------RV------------------GGNAEYINLDAKYLVPVPEGV  112 (331)
T ss_pred             CCEEEEeC-------------------------------CC------------------cceeeEEEechHHeEECCCCC
Confidence            99998431                               01                  389999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++.+++.+++++.+||+++.....+.++++|+|+|+ |++|++++++|+.+|+ +|++++. +++.+.++++|+.. ++.
T Consensus       113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~  189 (331)
T cd08273         113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY  189 (331)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence            999999999999999999877788999999999997 9999999999999999 8888887 88888999999754 444


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ..  .++.+.  ....+++|+++|++++.. ....+++++++ |+++.+|...
T Consensus       190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~  236 (331)
T cd08273         190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNS  236 (331)
T ss_pred             CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCC
Confidence            33  233332  333458999999999877 88999999997 9999999754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=7.8e-29  Score=230.05  Aligned_cols=260  Identities=25%  Similarity=0.328  Sum_probs=217.7

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+.+..++.+  +.+++.+.|.+.+++|+||+.++++|+.|.....+.++. ..+|.++|||++|+|+.+|+.+..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            678888776654  666777777789999999999999999999888776543 24578999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+...                               .+                  |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence            999998421                               11                  38999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.++.++.++|+++.+...+.++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN  190 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            9999999999999999998888889999999999997 9999999999999999 8899988898888888999887777


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ...  .++.+.+.....+ ++|++++++|+. .+...+++++++ |+++.+|...... ..+++..++. ++++.++...
T Consensus       191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~  265 (325)
T TIGR02824       191 YRE--EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTLR  265 (325)
T ss_pred             cCc--hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEehh
Confidence            654  4566677777666 899999999985 488899999997 9999999743222 2566666645 9999998755


Q ss_pred             C
Q 019139          324 G  324 (345)
Q Consensus       324 ~  324 (345)
                      .
T Consensus       266 ~  266 (325)
T TIGR02824       266 A  266 (325)
T ss_pred             h
Confidence            4

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.6e-28  Score=228.33  Aligned_cols=265  Identities=28%  Similarity=0.376  Sum_probs=217.9

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++...+.+  +.+.+.+.|.+.+++|+|++.++++|+.|.....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            678888876543  677788888889999999999999999999888776543 24578999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+..+...+                         . .+                  |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~-------------------------~-~~------------------g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          81 VGDRVSVIPAADL-------------------------G-QY------------------GTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCEEEecccccc-------------------------C-CC------------------ccceEEEEechHhcEeCCCC
Confidence            9999986432100                         0 11                  38999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++.+++.+++++.++|.++.....+.++++++|+|+ |++|++++++++..|+ ++++++.++++.+.++++|.+.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV  195 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877888999999999998 9999999999999999 8999888899988888899888887


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ...  ..+.+.+.+...+ ++|++++++++. .....+++++++ |+++.+|.... ....++....+. ++++.++...
T Consensus       196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T cd08268         196 TDE--EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD  270 (328)
T ss_pred             cCC--ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence            665  4566667777766 899999999984 488899999997 99999987432 233445443344 8898887654


Q ss_pred             C
Q 019139          324 G  324 (345)
Q Consensus       324 ~  324 (345)
                      .
T Consensus       271 ~  271 (328)
T cd08268         271 E  271 (328)
T ss_pred             c
Confidence            3

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=1.7e-28  Score=225.76  Aligned_cols=261  Identities=23%  Similarity=0.336  Sum_probs=208.2

Q ss_pred             cCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccC
Q 019139           29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS  107 (345)
Q Consensus        29 ~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~  107 (345)
                      .|++.+++|+||+.++++|+.|+....+.++. ..+|.++|+|++|+|+++|++++++++||+|+.....          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            57788999999999999999999988876543 2568899999999999999999999999999853210          


Q ss_pred             CCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHH
Q 019139          108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW  187 (345)
Q Consensus       108 ~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~  187 (345)
                                         .+                  |+|++|++++.+.++++|+++++.+++.++.++.+||+++ 
T Consensus        72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  113 (303)
T cd08251          72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-  113 (303)
T ss_pred             -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence                               11                  3899999999999999999999999999999999999987 


Q ss_pred             hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-Cc
Q 019139          188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      ....++++++++|+|+ |++|++++|+++.+|+ +|+++++++++.+.++++|++.+++...  .++.+.+..++.+ ++
T Consensus       114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~  190 (303)
T cd08251         114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV  190 (303)
T ss_pred             HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence            5788999999999976 9999999999999999 8999999999999999999998888765  5677777777776 89


Q ss_pred             cEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC---c---ccccHHHHHHHHh
Q 019139          266 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF---K---SRSQVPWLVDKYM  339 (345)
Q Consensus       266 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~~~  339 (345)
                      |+++|++++ ..+...+++++++ |+++.+|.........+++..+..++.+....+...   .   ..+.+.+++++++
T Consensus       191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (303)
T cd08251         191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE  268 (303)
T ss_pred             eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence            999999976 4588999999997 999999864322222344433333444433322111   0   1133566667776


Q ss_pred             ccc
Q 019139          340 KKV  342 (345)
Q Consensus       340 ~g~  342 (345)
                      +|.
T Consensus       269 ~g~  271 (303)
T cd08251         269 EGE  271 (303)
T ss_pred             CCC
Confidence            664

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=3.5e-28  Score=224.12  Aligned_cols=271  Identities=24%  Similarity=0.286  Sum_probs=214.2

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |||+++..++..  +.+++.+.|.+.++||+||+.++++|+.|+....|...   ...+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            678888877753  56677788888999999999999999999998877653   2355889999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||+|+.....                         +   .+                  |+|++|+.++.+.++++|
T Consensus        81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence            9999999854210                         0   12                  389999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      +++++..++.+++.+.++++++.....+.++++|+|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|++.+
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~  192 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV  192 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence            999999999999899999998877777999999999997 9999999999999999 788887777 7888888998888


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeec
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG  323 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  323 (345)
                      ++...  .++.+   ....+++|+++|++++. .....+++++++ |+++.+|.....  ..   ..+..++++....+.
T Consensus       193 ~~~~~--~~~~~---~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~~~  260 (309)
T cd05289         193 IDYTK--GDFER---AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVFVE  260 (309)
T ss_pred             EeCCC--Cchhh---ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEEec
Confidence            77654  23322   22223899999999987 489999999997 999999974321  11   112226666665432


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                      ..  ...+.++++++.++.
T Consensus       261 ~~--~~~~~~~~~~~~~~~  277 (309)
T cd05289         261 PD--GEQLAELAELVEAGK  277 (309)
T ss_pred             cc--HHHHHHHHHHHHCCC
Confidence            11  456777777777664

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=7.9e-28  Score=222.93  Aligned_cols=277  Identities=30%  Similarity=0.446  Sum_probs=222.8

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCC-CCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      |+|+++..++.+  +.+.+.+ |.+. +++|+||+.++++|+.|+....|.+.. ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            678888754433  6777777 7666 499999999999999999988776532 2456789999999999999999999


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ++||+|+...                               ..                  |++++|+.++.+.++++|+
T Consensus        80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~  110 (323)
T cd08241          80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD  110 (323)
T ss_pred             CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence            9999998431                               01                  3899999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      ++++.+++.+..++.+|+.++.....++++++|+|+|+ |++|++++++|+..|+ .|++++.++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (323)
T cd08241         111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI  189 (323)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence            99999998888899999998877788999999999998 9999999999999999 799999999999999999988887


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      +...  .++.+.+...+.+ ++|.++|++|+. ....++++++++ |+++.+|....... .+++...+. ++++.++.+
T Consensus       190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  264 (323)
T cd08241         190 DYRD--PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW  264 (323)
T ss_pred             ecCC--ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence            7665  5677778887776 899999999984 488899999997 99999997432211 233433334 899999876


Q ss_pred             cCCcc------cccHHHHHHHHhccc
Q 019139          323 GGFKS------RSQVPWLVDKYMKKV  342 (345)
Q Consensus       323 ~~~~~------~~~~~~~~~~~~~g~  342 (345)
                      ..+..      .+.+.++++++.++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (323)
T cd08241         265 GAYARREPELLRANLAELFDLLAEGK  290 (323)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHCCC
Confidence            54321      134566777776664

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.7e-27  Score=220.41  Aligned_cols=277  Identities=23%  Similarity=0.329  Sum_probs=216.5

Q ss_pred             eeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        11 ~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      ||+++...+.  .+.+.+.+.|+|.+++|+||+.++++|+.|...+.|.++. ...|.++|||++|+|+.+|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4566665554  3777788888889999999999999999999988876543 245778999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||+|+...                               .+                  |+|++|+.++.+.++++|+++
T Consensus        81 G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~  111 (337)
T cd08275          81 GDRVMGLT-------------------------------RF------------------GGYAEVVNVPADQVFPLPDGM  111 (337)
T ss_pred             CCEEEEec-------------------------------CC------------------CeeeeEEEecHHHeEECCCCC
Confidence            99998431                               11                  389999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ++.+++.+++++.++|+++.....++++++|+|+|+ |++|++++++|+.+ +. .++. ...+++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~  189 (337)
T cd08275         112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVG-TASASKHEALKENGVTHVID  189 (337)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEE-eCCHHHHHHHHHcCCcEEee
Confidence            999999999999999999888888999999999998 99999999999999 33 2322 23455778888899988887


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC--Cc-------------eecChhh
Q 019139          246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--QE-------------ISTRPFQ  310 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~--~~-------------~~~~~~~  310 (345)
                      ...  .++.+.+...+.+++|+++|++|+.. ....+++++++ |+++.+|.....  ..             +.+.+..
T Consensus       190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd08275         190 YRT--QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK  265 (337)
T ss_pred             CCC--CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence            765  56667777776568999999999854 88899999997 999999864321  11             1233334


Q ss_pred             hcc-ccEEEEeeecCCccc-----ccHHHHHHHHhccc
Q 019139          311 LVT-GRVWKGTAFGGFKSR-----SQVPWLVDKYMKKV  342 (345)
Q Consensus       311 ~~~-~~~i~g~~~~~~~~~-----~~~~~~~~~~~~g~  342 (345)
                      ++. ++++.++.+......     ..+.++++++.+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (337)
T cd08275         266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGK  303 (337)
T ss_pred             HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCC
Confidence            455 999999875422111     23566777776664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=1.3e-27  Score=217.84  Aligned_cols=251  Identities=22%  Similarity=0.271  Sum_probs=203.1

Q ss_pred             CeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCC
Q 019139           35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG  114 (345)
Q Consensus        35 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~  114 (345)
                      +||+||+.++++|++|++...|..+  .+|.++|||++|+|+++|++++.+++||+|+...                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            5899999999999999998887652  3578999999999999999999999999998431                   


Q ss_pred             CcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCC
Q 019139          115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP  194 (345)
Q Consensus       115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~  194 (345)
                                                     .|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus        60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                                           1389999999999999999999999999998999999999878888999


Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC--CceEeCCCCCCccHHHHHHhhcCC-CccEEEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g--~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d  270 (345)
                      +++|+|+|+ |++|++++|+|+.+|+ ++++++.++++.+.+++.+  ++.+++..+  .++.+.+.+++.+ ++|+++|
T Consensus       109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~  185 (293)
T cd05195         109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN  185 (293)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence            999999986 9999999999999999 8999989889999998888  677777654  4567778877766 8999999


Q ss_pred             ccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc------ccccHHHHHHHHhccc
Q 019139          271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK------SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~  342 (345)
                      ++|+. .+...+++++++ |+++.+|.........++...+..++++.+..+....      ..+.+.++++++.+++
T Consensus       186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (293)
T cd05195         186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV  261 (293)
T ss_pred             CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCC
Confidence            99987 599999999997 9999998754221223333333336666665433211      1134566777776664

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.1e-27  Score=219.20  Aligned_cols=264  Identities=25%  Similarity=0.298  Sum_probs=202.1

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCC
Q 019139           23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC   99 (345)
Q Consensus        23 ~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~   99 (345)
                      ++++.|.|+|.++||+||+.++++|+.|...+.|..+.   ...|..+|||++|+|+++|++++.+++||+|+...... 
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~-   93 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK-   93 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence            77888999999999999999999999999988776531   24567899999999999999999999999998542100 


Q ss_pred             CCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccch
Q 019139          100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV  179 (345)
Q Consensus       100 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~  179 (345)
                                                 ..                  |+|++|+.++.+.++++|+++++.+++.+++++
T Consensus        94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                       11                  389999999999999999999999999999999


Q ss_pred             hhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHH
Q 019139          180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV  258 (345)
Q Consensus       180 ~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  258 (345)
                      .+||+++.....++++++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++.+++...  .++.   .
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~  201 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A  201 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence            999999877777999999999998 9999999999999999 88888765 7888889999988887665  2222   3


Q ss_pred             hhcCC-CccEEEEccCCH-HHHHHHHHHhccCCeEEEEeccCCCCCceec---ChhhhccccEEEEeeecCCcccccHHH
Q 019139          259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW  333 (345)
Q Consensus       259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~  333 (345)
                      ..+.+ ++|+++|++|+. ......+..++++ |+++.+|..........   ..........+.......  ..+.+.+
T Consensus       202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  278 (319)
T cd08267         202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQ  278 (319)
T ss_pred             hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHH
Confidence            34444 899999999853 2233444448997 99999997543222222   111222233333332211  2466788


Q ss_pred             HHHHHhccc
Q 019139          334 LVDKYMKKV  342 (345)
Q Consensus       334 ~~~~~~~g~  342 (345)
                      +++++++++
T Consensus       279 ~~~~l~~~~  287 (319)
T cd08267         279 LAELVEEGK  287 (319)
T ss_pred             HHHHHHCCC
Confidence            888887765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=9.8e-27  Score=211.94  Aligned_cols=246  Identities=22%  Similarity=0.339  Sum_probs=198.8

Q ss_pred             EEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCC
Q 019139           39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG  118 (345)
Q Consensus        39 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~  118 (345)
                      ||+.++++|+.|++...|.++   .|.++|||++|+|+++|+.++.+++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            899999999999999887654   357899999999999999999999999998421                       


Q ss_pred             CCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEE
Q 019139          119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV  198 (345)
Q Consensus       119 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~V  198 (345)
                                                 .|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+.++++|
T Consensus        56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       13899999999999999999999999999999999999988788889999999


Q ss_pred             EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCC
Q 019139          199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN  274 (345)
Q Consensus       199 lI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~  274 (345)
                      +|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+  +.++++.+  .++.+.+.+...+ ++|+++|++++
T Consensus       109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~  185 (288)
T smart00829      109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG  185 (288)
T ss_pred             EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence            99986 9999999999999999 89999999999999999998  67777655  4566777777766 89999999996


Q ss_pred             HHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc-----ccccHHHHHHHHhccc
Q 019139          275 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-----SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       275 ~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~g~  342 (345)
                       ..+...+++++++ |+++.+|.........+++..+.+++++.+..+....     ..+.+.++++++.+++
T Consensus       186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (288)
T smart00829      186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGV  256 (288)
T ss_pred             -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCC
Confidence             5588899999997 9999999743222233444443337777776532111     1133556666666554

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=1e-23  Score=185.56  Aligned_cols=263  Identities=22%  Similarity=0.268  Sum_probs=196.1

Q ss_pred             EEEEeecC-CCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCc----ceeEEEEEeCCCCCCCCCCCEEEecCc
Q 019139           23 VIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH----EAAGIVESVGEGVTEVQPGDHVIPCYQ   96 (345)
Q Consensus        23 ~~~~~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~----e~~G~Vv~~G~~v~~~~~Gd~V~~~~~   96 (345)
                      +.++++++ ++++++||||.+|-+..|...--++-..+.. -.|+.||-    .++|+|++  |+.+++++||.|..   
T Consensus        25 ~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g---   99 (343)
T KOG1196|consen   25 TTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWG---   99 (343)
T ss_pred             eeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEE---
Confidence            33445544 4589999999999999654433222111110 11233332    67899999  56678999999952   


Q ss_pred             CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce--EEEcC--CCCChhhh
Q 019139           97 AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS--VAKID--PQAPLDKV  172 (345)
Q Consensus        97 ~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~iP--~~l~~~~a  172 (345)
                                                 +.                      +|.||.++++..  .+++|  .+.++...
T Consensus       100 ---------------------------~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~y  130 (343)
T KOG1196|consen  100 ---------------------------IV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYY  130 (343)
T ss_pred             ---------------------------ec----------------------cceEEEEecCcchhcccCCCCCccCHhhh
Confidence                                       22                      799999997643  44444  34444443


Q ss_pred             c-ccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCC
Q 019139          173 C-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDH  249 (345)
Q Consensus       173 a-~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~  249 (345)
                      . .+..+..|||..+.+.+.+++|++|+|-|| |++|+++.|+|+.+|+ .|+++..+++|.++++ ++|.+..+||+++
T Consensus       131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e  209 (343)
T KOG1196|consen  131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE  209 (343)
T ss_pred             hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc
Confidence            3 367789999999999999999999999988 9999999999999999 9999999999999886 5799999999982


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC---CCceecCh-hhhcc-ccEEEEeeecC
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---GQEISTRP-FQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~~~~~~~~-~~~~~-~~~i~g~~~~~  324 (345)
                       .+..+++.+..+.++|+.||.+|+.. ++..+..++.. ||++.||+-+.   ..+..+.. ...+. .++|+|+....
T Consensus       210 -~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d  286 (343)
T KOG1196|consen  210 -SDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD  286 (343)
T ss_pred             -cCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence             47888999988889999999999965 99999999995 99999997541   11112222 23334 99999988776


Q ss_pred             Cccc--ccHHHHHHHHhcccc
Q 019139          325 FKSR--SQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~--~~~~~~~~~~~~g~~  343 (345)
                      +.+.  +-++.+..++++|++
T Consensus       287 ~~d~~~k~ld~l~~~ikegKI  307 (343)
T KOG1196|consen  287 YLDKYPKFLDFLLPYIKEGKI  307 (343)
T ss_pred             hhhhhHHHHHHHHHHHhcCce
Confidence            6543  445777788888876

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.92  E-value=2.4e-23  Score=189.99  Aligned_cols=219  Identities=27%  Similarity=0.341  Sum_probs=173.4

Q ss_pred             CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCccccccc
Q 019139           56 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI  135 (345)
Q Consensus        56 g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~  135 (345)
                      |.+|. ++|.++|||++|+|+++|++++.+++||+|+..                                         
T Consensus        14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------   51 (277)
T cd08255          14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------   51 (277)
T ss_pred             cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence            43433 488999999999999999999999999999842                                         


Q ss_pred             CCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHH
Q 019139          136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK  215 (345)
Q Consensus       136 ~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~  215 (345)
                                 +.|++|+.++.+.++++|+++++.+++.+ .++.+||+++ ...+++++++++|+|+|++|++++++|+
T Consensus        52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~  118 (277)
T cd08255          52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK  118 (277)
T ss_pred             -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence                       16899999999999999999999998888 7899999987 5788999999999988999999999999


Q ss_pred             HcCCCeEEEEcCChhHHHHHHhcC-CceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139          216 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       216 ~~G~~~vi~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  293 (345)
                      .+|.++|+++++++++.++++++| ++.++...+          ....+ ++|++||+++....+...+++++++ |+++
T Consensus       119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~  187 (277)
T cd08255         119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV  187 (277)
T ss_pred             HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence            999943999999999999999999 454443321          11233 8999999999777789999999997 9999


Q ss_pred             EeccCCCCCceecChhhhcc-ccEEEEeeecCCc---------ccccHHHHHHHHhccc
Q 019139          294 IVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK---------SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       294 ~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~g~  342 (345)
                      .+|..... .. .....+.. .+++.++......         ..+.+.++++++.+++
T Consensus       188 ~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  244 (277)
T cd08255         188 LVGWYGLK-PL-LLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGR  244 (277)
T ss_pred             EEeccCCC-cc-ccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCC
Confidence            99975432 21 11223333 6677777654321         1256788888888775

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.89  E-value=9e-23  Score=203.83  Aligned_cols=257  Identities=17%  Similarity=0.187  Sum_probs=210.0

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecCccccccccCCCCCCC-------CCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139           22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-------FPCILGHEAAGIVESVGEGVTEVQPGDHV   91 (345)
Q Consensus        22 ~~~~~~~~p---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-------~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V   91 (345)
                      +...+-|..   +..++.=+--|-|+.||..|+....|+.++.-       ..+++|-||+|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            444444433   23577779999999999999999999986542       347999999997          3559999


Q ss_pred             EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhh
Q 019139           92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK  171 (345)
Q Consensus        92 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~  171 (345)
                      +...                               ...                  ++|+-+.++.+.+|.+|.+..+++
T Consensus      1499 M~mv-------------------------------pAk------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMV-------------------------------PAK------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEee-------------------------------ehh------------------hhhhhhhcchhhhhhCCcccchhh
Confidence            7421                               111                  788889999999999999999999


Q ss_pred             hcccccchhhhhHHHHhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC----CceEeCC
Q 019139          172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNP  246 (345)
Q Consensus       172 aa~~~~~~~ta~~al~~~~~~~~g~~VlI~G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g----~~~~i~~  246 (345)
                      |+..|+.++|+|+||+.++++++|+++||++ +|++|++|+.+|.++|+ .|+.+..+.+|++++++..    ..++-|.
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence            9999999999999999999999999999995 59999999999999999 8999999999999887533    3444455


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  325 (345)
                      ++  .+|.+-+.+.|.| |+|+|+++...+. ++.+++||+.+ |||..+|-..-..+-++-+.-|++|.+++|..+.+.
T Consensus      1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred             cc--ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence            54  7899999999999 9999999999877 99999999997 999999976555666777777778999999998777


Q ss_pred             ccc--ccHHHHHHHHhccc
Q 019139          326 KSR--SQVPWLVDKYMKKV  342 (345)
Q Consensus       326 ~~~--~~~~~~~~~~~~g~  342 (345)
                      .+.  ++..++..++++|.
T Consensus      1685 mege~e~~~ev~~Lv~eGI 1703 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGI 1703 (2376)
T ss_pred             hcCcHHHHHHHHHHHHhhh
Confidence            532  33355566666554

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=2.7e-23  Score=163.23  Aligned_cols=108  Identities=37%  Similarity=0.694  Sum_probs=93.3

Q ss_pred             CCeEEEEEeeeecCccccccccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCC
Q 019139           34 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL  112 (345)
Q Consensus        34 ~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~  112 (345)
                      ||||||||.++|||++|++++.|. .....+|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+.+.++.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            799999999999999999999984 4555899999999999999999999999999999999998899999999999999


Q ss_pred             CCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139          113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus       113 c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      |++....   |+. .+                  |+||||+.+|+++++++
T Consensus        81 c~~~~~~---g~~-~~------------------G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVL---GLG-LD------------------GGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEET---TTS-ST------------------CSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEe---EcC-CC------------------CcccCeEEEehHHEEEC
Confidence            9876642   222 33                  49999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.79  E-value=2.3e-18  Score=139.27  Aligned_cols=128  Identities=29%  Similarity=0.445  Sum_probs=117.1

Q ss_pred             hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHH
Q 019139          205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE  283 (345)
Q Consensus       205 ~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~  283 (345)
                      ++|++++|+|+.+|+ +|++++++++|+++++++|++.++++++  .++.+.+++.+++ ++|++|||+|.+..++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999997 9999999999999999999999999987  6699999999998 99999999998888999999


Q ss_pred             HhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhc
Q 019139          284 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK  340 (345)
Q Consensus       284 ~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~  340 (345)
                      +++++ |+++++|... +..++++...++. ++++.|++.++   .++++++++++++
T Consensus        78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            99998 9999999965 5788999999988 99999998775   4889999988864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.31  E-value=4e-11  Score=117.00  Aligned_cols=145  Identities=19%  Similarity=0.238  Sum_probs=105.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCC-----------ccHHHHHHh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHD-----------KPIQQVLVD  259 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~-----------~~~~~~~~~  259 (345)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+           .++.+...+
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4679999999999999999999999999 89999999999999999999854 5543311           122222222


Q ss_pred             h-cC--CCccEEEEccCC-----HHHH-HHHHHHhccCCeEEEEeccCCCCC-ceecChhhhc--cccEEEEeeecCCcc
Q 019139          260 L-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLV--TGRVWKGTAFGGFKS  327 (345)
Q Consensus       260 ~-~~--gg~d~v~d~~g~-----~~~~-~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~  327 (345)
                      . ..  +++|++|+|++.     +.++ +++++.++++ |+++.+|...++. +++++...++  +++++.|+....   
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P---  316 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP---  316 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence            2 33  379999999996     3354 9999999998 9999999853331 3455444554  399999987432   


Q ss_pred             cccHH-HHHHHHhccc
Q 019139          328 RSQVP-WLVDKYMKKV  342 (345)
Q Consensus       328 ~~~~~-~~~~~~~~g~  342 (345)
                       .++. +..+++.++.
T Consensus       317 -~~~p~~As~lla~~~  331 (509)
T PRK09424        317 -SRLPTQSSQLYGTNL  331 (509)
T ss_pred             -hhHHHHHHHHHHhCC
Confidence             2444 3666666554

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.15  E-value=1e-09  Score=104.66  Aligned_cols=140  Identities=18%  Similarity=0.196  Sum_probs=109.7

Q ss_pred             hHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++.+..+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ +       ..+.+    
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v----  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV----  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence            344444433 4689999999999999999999999999 89999999999999999998532 1       11222    


Q ss_pred             CCCccEEEEccCCHHHHHHH-HHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHH--HHHHH
Q 019139          262 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK  337 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~~~  337 (345)
                       .++|++|+++|...++... +..++++ |+++.+|..    +.++++..+.. ++++.|+.....  .-+++  +.+++
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L  327 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL  327 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence             2589999999998888776 9999997 999999963    46788888877 999999875422  12455  68888


Q ss_pred             Hhcccc
Q 019139          338 YMKKVN  343 (345)
Q Consensus       338 ~~~g~~  343 (345)
                      +++|+.
T Consensus       328 La~Grl  333 (413)
T cd00401         328 LAEGRL  333 (413)
T ss_pred             hhCcCC
Confidence            988875

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.45  E-value=1.6e-06  Score=84.74  Aligned_cols=127  Identities=19%  Similarity=0.239  Sum_probs=91.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCC-----------CccHHHHHHhh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVDL  260 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~-----------~~~~~~~~~~~  260 (345)
                      .++++|+|+|+|.+|+++++.++.+|+ .|++++.+.++++.++++|++.+ ++..+.           ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            357999999999999999999999999 79999999999999999998763 232110           01233323332


Q ss_pred             cC---CCccEEEEcc---CCHH---HHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hc-c-ccEEEEeee
Q 019139          261 TD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LV-T-GRVWKGTAF  322 (345)
Q Consensus       261 ~~---gg~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~-~-~~~i~g~~~  322 (345)
                      ..   .++|++|+|+   |.+.   ..+..++.++++ +.++.++...++ .+++....  +. . ++++.|...
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~n  313 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYTD  313 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeCC
Confidence            22   2799999999   5432   467889999998 999999885544 55555221  22 2 588888763

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.25  E-value=1.7e-05  Score=76.19  Aligned_cols=103  Identities=25%  Similarity=0.317  Sum_probs=79.0

Q ss_pred             hhHHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhh
Q 019139          182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       182 a~~al~~~~~~~-~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      .|.++.+...+. .|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|++ +.       ++.+.+   
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l~eal---  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TMEEAA---  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CHHHHH---
Confidence            355554443444 89999999999999999999999999 899999988887666666754 22       122222   


Q ss_pred             cCCCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccCC
Q 019139          261 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~  299 (345)
                        .++|++++++|....+. ..+..++++ +.++..|...
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence              26899999999887676 678889997 9999998753

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.13  E-value=7.1e-05  Score=69.07  Aligned_cols=111  Identities=21%  Similarity=0.265  Sum_probs=82.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+.+|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ ...    ++    .+.. ..+|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~~----~l----~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HLS----EL----AEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cHH----HH----HHHh-CCCCEEEECCC
Confidence            58999999999999999999999999 99999999888888888886532 111    12    2222 26999999988


Q ss_pred             CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      ........+..++++ +.++.++..+++.  ++.  .... ++++.+.
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt--d~~--~a~~~Gv~~~~~  262 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT--DFE--YAEKRGIKALLA  262 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCc--Cee--ehhhCCeEEEEE
Confidence            755456777889997 9999999865443  332  2233 7777753

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.12  E-value=8.3e-06  Score=74.36  Aligned_cols=103  Identities=27%  Similarity=0.435  Sum_probs=71.8

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ...++++++||.+|+|+ |..+.++++..|.. +|++++.+++.++.+++.    +.+.+....   .++. .+ .+..+
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~~-~l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEIE-AL-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cchh-hC-CCCCC
Confidence            35678999999999987 88888888887753 699999999988888753    332221111   1111 11 12234


Q ss_pred             CccEEEEcc------CCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          264 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       264 g~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+|+|+...      .....+..+.+.|+++ |++++.+..
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~  185 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV  185 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence            899998543      2245689999999998 999998764

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.10  E-value=5.5e-05  Score=72.30  Aligned_cols=101  Identities=25%  Similarity=0.343  Sum_probs=77.5

Q ss_pred             hHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++.+... ..+|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.       +..+.+    
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal----  248 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA----  248 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH----
Confidence            344434433 4689999999999999999999999999 899998888877777777763 22       122222    


Q ss_pred             CCCccEEEEccCCHHHHHH-HHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~~~~-~~~~l~~~~G~~v~~G~~  298 (345)
                       .+.|++|+++|....+.. .+..++++ +.++..|..
T Consensus       249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~  284 (406)
T TIGR00936       249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF  284 (406)
T ss_pred             -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence             257999999999887765 88889997 999999874

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.98  E-value=2.9e-07  Score=88.92  Aligned_cols=156  Identities=18%  Similarity=0.189  Sum_probs=101.9

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccC
Q 019139           66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG  145 (345)
Q Consensus        66 ~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~  145 (345)
                      .-|.|+++.+.+++++++.     +|+..+.. |+.|++|    ++.|......   |.. .+                 
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~-l~-----------------  137 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV-LE-----------------  137 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH-HH-----------------
Confidence            5688999999999998876     55555555 7888888    4555443321   111 22                 


Q ss_pred             cceeeeeEEeecceEEE---c-CCCCChhhhcccccchhhhhHHH---HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 019139          146 TSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAV---WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG  218 (345)
Q Consensus       146 ~g~~a~~~~v~~~~~~~---i-P~~l~~~~aa~~~~~~~ta~~al---~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G  218 (345)
                       +.|++++.++. .+..   + +..++            .++.++   .+.....++++|+|+|+|.+|..+++.++..|
T Consensus       138 -~lf~~a~~~~k-~vr~~t~i~~~~vS------------v~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G  203 (417)
T TIGR01035       138 -RLFQKAFSVGK-RVRTETDISAGAVS------------ISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKG  203 (417)
T ss_pred             -HHHHHHHHHhh-hhhhhcCCCCCCcC------------HHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCC
Confidence             38999888876 3322   2 22222            222222   12233467899999999999999999999999


Q ss_pred             CCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          219 ASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       219 ~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +.+|++++++.++.+ +++++|.. .+..    .+..+.+     .++|+||+|++++.
T Consensus       204 ~~~V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~  252 (417)
T TIGR01035       204 VGKILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH  252 (417)
T ss_pred             CCEEEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence            668999999887744 66777753 2221    1122222     26999999998654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.97  E-value=2.3e-05  Score=72.86  Aligned_cols=109  Identities=20%  Similarity=0.205  Sum_probs=79.0

Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCC---CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HH
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV---EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FD  233 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~---~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~  233 (345)
                      ...+++|+.+..+.++... +.++++.++......   -++.+|+|+|+|.+|..+++.++..|..+|++++++.++ .+
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4567788888888777765 677777775322221   478999999999999999999999887789999998876 46


Q ss_pred             HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 019139          234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV  277 (345)
Q Consensus       234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~  277 (345)
                      +++++|+. .++..    ++.+.+     ..+|+||.+++.+..
T Consensus       218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence            77888873 32221    122222     258999999998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02494 adenosylhomocysteinase

Probab=97.94  E-value=0.00011  Score=70.97  Aligned_cols=101  Identities=26%  Similarity=0.324  Sum_probs=78.5

Q ss_pred             hHHHHhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       183 ~~al~~~~~~-~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++.+...+ -.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+.. +       +..+.+.   
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~---  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS---  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence            4445444443 679999999999999999999999999 8999998887766777777652 1       1222222   


Q ss_pred             CCCccEEEEccCCHHH-HHHHHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~G~~  298 (345)
                        ..|+++++.|.... ....+..++++ +.++.+|..
T Consensus       309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence              47999999998765 48899999997 999999974

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.92  E-value=0.00024  Score=63.97  Aligned_cols=134  Identities=22%  Similarity=0.267  Sum_probs=84.0

Q ss_pred             eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      +|.+|.. +...++.+++++++..+.--. +.. ....+.  ....++++|+-+|+|. |.+++.+++ .|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4555544 667888999888776654221 111 122221  1256889999999986 888776544 67757999999


Q ss_pred             ChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEccCCH---HHHHHHHHHhccCCeEEEEeccCC
Q 019139          228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       228 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ++...+.+++.-...-+. ..  .       .+..+  .+|+|+......   ..++.+.+.|+++ |++++.|...
T Consensus       151 s~~~l~~A~~n~~~~~~~-~~--~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        151 DPQAVEAARENAELNGVE-LN--V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CHHHHHHHHHHHHHcCCC-ce--E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            999888776431110000 00  0       01112  599998766543   2356777889998 9999988653

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.87  E-value=1e-05  Score=81.51  Aligned_cols=80  Identities=26%  Similarity=0.361  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHhcCCceEeCCCC-
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD-  248 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~---------------------~~~~~~~~~~g~~~~i~~~~-  248 (345)
                      ..+.|++|+|+|+|+.|+++++.++..|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            36789999999999999999999999999 78888742                     34567788899887766432 


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      .+... +.+    ..++|++|+++|...
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence            11111 111    236999999999753

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.86  E-value=6.4e-05  Score=64.78  Aligned_cols=119  Identities=18%  Similarity=0.175  Sum_probs=84.1

Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH----HHHHhcCC
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGV  240 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~----~~~~~~g~  240 (345)
                      ..++......+.-+.+.|.  +.+...++++++||-+|+| +|..++-+|+..|  +|+.+++.++=.    +.++.+|.
T Consensus        45 ~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~  119 (209)
T COG2518          45 RALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGY  119 (209)
T ss_pred             CcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCC
Confidence            3344444444555555654  4578889999999999997 5999999999988  799999988733    34567888


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +.+.....+      -...+... +||.|+-+.+.+..-+.+++.|+++ |+++..
T Consensus       120 ~nV~v~~gD------G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         120 ENVTVRHGD------GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             CceEEEECC------cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence            554322211      11123333 8999998888877668899999998 988765

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.77  E-value=0.00019  Score=68.37  Aligned_cols=118  Identities=21%  Similarity=0.229  Sum_probs=78.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc-
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI-  272 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~-  272 (345)
                      +.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+. .++........+     .+.+.+.. ..+|++|+++ 
T Consensus       167 ~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-----~~~l~~~l-~~aDvVI~a~~  239 (370)
T TIGR00518       167 PGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-----AYEIEDAV-KRADLLIGAVL  239 (370)
T ss_pred             CceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-----HHHHHHHH-ccCCEEEEccc
Confidence            4569999999999999999999999 8999999988877664 455432222221     11222222 2689999997 


Q ss_pred             --CC--HH-HHHHHHHHhccCCeEEEEeccCCCCCceecChh------hhcc-ccEEEEee
Q 019139          273 --GN--VS-VMRAALECCHKGWGTSVIVGVAASGQEISTRPF------QLVT-GRVWKGTA  321 (345)
Q Consensus       273 --g~--~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~------~~~~-~~~i~g~~  321 (345)
                        +.  +. .....++.++++ +.++.++...++ .++..-.      .+.. ++++.+..
T Consensus       240 ~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG-~~e~~~~t~~d~p~~~~~Gv~~~~v~  298 (370)
T TIGR00518       240 IPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG-CVETSRPTTHDQPTYAVHDVVHYCVA  298 (370)
T ss_pred             cCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC-CccCCcCCCCCCCEEEECCeEEEEeC
Confidence              32  22 137777889997 999999875433 3332211      1223 78887774

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.68  E-value=0.00025  Score=73.08  Aligned_cols=137  Identities=24%  Similarity=0.321  Sum_probs=86.3

Q ss_pred             eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 019139          148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      ++++|..+|+..++.+ +..+++++.....          ...+..++++++|+|+ |++|...++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5677777777777666 5566666542110          0122346789999997 9999999999999999 899999


Q ss_pred             CChhHHHHHH-hcCC--c---eEeCCCCCCccHHHHHHhhc--CCCccEEEEccCC------------------------
Q 019139          227 IDPKKFDRAK-NFGV--T---EFVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN------------------------  274 (345)
Q Consensus       227 ~~~~~~~~~~-~~g~--~---~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d~~g~------------------------  274 (345)
                      ++.++.+.+. +++.  .   ...|..+ +..+.+.+.+..  .+++|++|+++|.                        
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g  532 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG  532 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            9887765543 3433  1   1123332 122222232221  2479999999982                        


Q ss_pred             -HHHHHHHHHHhcc---CCeEEEEeccC
Q 019139          275 -VSVMRAALECCHK---GWGTSVIVGVA  298 (345)
Q Consensus       275 -~~~~~~~~~~l~~---~~G~~v~~G~~  298 (345)
                       ...++.+++.+++   + |+++.+++.
T Consensus       533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        533 HFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence             1224444566655   5 899999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.68  E-value=0.00068  Score=62.25  Aligned_cols=96  Identities=23%  Similarity=0.314  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+.+++|+|.|.+|...+..++.+|+ +|++++++.++.+.+.++|...+ ..    .+    +.+.. ..+|+++.+++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~----l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NK----LEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HH----HHHHh-ccCCEEEECCC
Confidence            47899999999999999999999999 89999999887777777665321 11    11    22221 26899999987


Q ss_pred             CHHHHHHHHHHhccCCeEEEEeccCCCC
Q 019139          274 NVSVMRAALECCHKGWGTSVIVGVAASG  301 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~  301 (345)
                      ....-...+..++++ ..++.++..+++
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~  245 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGG  245 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence            654335667788897 899999875443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.61  E-value=0.00064  Score=65.98  Aligned_cols=100  Identities=23%  Similarity=0.324  Sum_probs=75.2

Q ss_pred             HHHHhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          184 GAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       184 ~al~~~~-~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .++.+.. ..-.|.+|+|+|.|.+|...++.++.+|+ +|++++.+..+...+...|+.. .       ++.+.+     
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell-----  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV-----  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence            3443433 34578999999999999999999999999 8999988776655555556531 1       222222     


Q ss_pred             CCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~  298 (345)
                      ...|+++.++|....+. ..+..++++ +.++.+|..
T Consensus       308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence            25899999999877664 889999997 999999874

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.59  E-value=0.00036  Score=64.17  Aligned_cols=98  Identities=24%  Similarity=0.293  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ..++++|+-+|+|. |.+++.+++ .|+.+|++++.++...+.+++.    +....+....  .+    ......+++|+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~--~~----~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL--IY----LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe--cc----cccccCCCceE
Confidence            45789999999986 888777665 5766999999999887777542    2211111000  01    11122348999


Q ss_pred             EEEccCCH---HHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |+......   ..+..+.+.|+++ |++++.|..
T Consensus       229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            99765543   3456677899998 999998864

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.57  E-value=1.5e-05  Score=63.61  Aligned_cols=89  Identities=20%  Similarity=0.279  Sum_probs=53.1

Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC--CHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-c
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-G  314 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~  314 (345)
                      ||+++++|+++  .++      ...+++|+|||++|  +...+..++++| ++ |+++.++.       .+....... .
T Consensus         1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred             CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence            68999999985  444      22349999999999  655446777788 97 99999984       111111111 2


Q ss_pred             cEEEEeeecCCc----ccccHHHHHHHHhcccc
Q 019139          315 RVWKGTAFGGFK----SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       315 ~~i~g~~~~~~~----~~~~~~~~~~~~~~g~~  343 (345)
                      ..+.+..+.+..    ..+.++++.+++++|++
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l   96 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL   96 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe
Confidence            333333333211    22458999999999875

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.35  E-value=0.00041  Score=67.36  Aligned_cols=160  Identities=19%  Similarity=0.202  Sum_probs=96.7

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccC
Q 019139           66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG  145 (345)
Q Consensus        66 ~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~  145 (345)
                      .-|+|+++.+.+++++++..-+|+.-+         |..|+.. .+.|.....   .|.. .+                 
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI---------lgQvk~a-~~~a~~~g~---~g~~-l~-----------------  139 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI---------LGQVKDA-YALAQEAGT---VGTI-LN-----------------  139 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH---------HHHHHHH-HHHHHHcCC---chHH-HH-----------------
Confidence            469999999999999987755555432         2333322 222221111   0100 11                 


Q ss_pred             cceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 019139          146 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRV  222 (345)
Q Consensus       146 ~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~v  222 (345)
                       +.|++.+.++        +.+..+.+ ....+.+.+++++.....   -.++.+|+|+|+|.+|.++++.++..|+.+|
T Consensus       140 -~lf~~a~~~~--------k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        140 -RLFQKAFSVA--------KRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             -HHHHHHHHHH--------hhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence             2565544443        33332222 222355666666532222   2578999999999999999999999998789


Q ss_pred             EEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          223 IGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       223 i~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      ++++++.++.+ +++++|.+ ++...    +..+.+     .++|+||++++++.
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~~----~~~~~l-----~~aDvVI~aT~s~~  254 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPLD----ELPEAL-----AEADIVISSTGAPH  254 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeHH----HHHHHh-----ccCCEEEECCCCCC
Confidence            99999887754 66777753 22221    111111     26899999999754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.30  E-value=0.0017  Score=55.77  Aligned_cols=106  Identities=19%  Similarity=0.228  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCce-EeCCCCC--CccHHHHHHhhcCCCcc
Q 019139          193 EPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDH--DKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       193 ~~g~~VlI~Ga--g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~-~i~~~~~--~~~~~~~~~~~~~gg~d  266 (345)
                      +....|+|+|+  |++|++.+.=...-|+ .|+++.++.+..+-+. ++|... -+|..++  -..+.+++++.+.|+.|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            45678999975  9999998888888999 9999999999887765 666532 2333331  12345677777888999


Q ss_pred             EEEEccCCH----------HHHHHHH----------------HHhccCCeEEEEeccCCC
Q 019139          267 YSFECIGNV----------SVMRAAL----------------ECCHKGWGTSVIVGVAAS  300 (345)
Q Consensus       267 ~v~d~~g~~----------~~~~~~~----------------~~l~~~~G~~v~~G~~~~  300 (345)
                      +.++..|.+          ...++.+                ..++.. |+||.+|+...
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~  142 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAG  142 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeE
Confidence            999988842          1122211                235675 99999998654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.26  E-value=0.0016  Score=57.43  Aligned_cols=79  Identities=18%  Similarity=0.305  Sum_probs=58.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC----ceEeCCCCCCccHHHHHHhhcCC--Cc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~----~~~i~~~~~~~~~~~~~~~~~~g--g~  265 (345)
                      .++.++|+|+ +++|.+.++.....|+ +|+.+.|++++++.+ .+++.    ...+|..+ ..+....+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence            3478899999 9999999999999999 999999999988766 46772    22344443 23344445544444  79


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+.++..|-
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999884

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0063  Score=55.19  Aligned_cols=76  Identities=24%  Similarity=0.384  Sum_probs=53.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEEEc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC  271 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~d~  271 (345)
                      .+++|+|+ |++|...++.+...|+ +|++++++.++.+.+...+...+ .|..+ ++.+.+.+....  .+++|+++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence            47899998 9999999999999999 89999998887776665554433 34433 123333333332  2479999999


Q ss_pred             cC
Q 019139          272 IG  273 (345)
Q Consensus       272 ~g  273 (345)
                      .|
T Consensus        80 ag   81 (274)
T PRK05693         80 AG   81 (274)
T ss_pred             CC
Confidence            88

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.18  E-value=0.0039  Score=58.13  Aligned_cols=102  Identities=18%  Similarity=0.206  Sum_probs=71.9

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+.....   +..+.... 
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~-  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE-  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence            3455678899999999997 59999999998763 36999999998766554    466654332221   22111111 


Q ss_pred             cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE
Q 019139          261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  294 (345)
                       .+.+|+|+.+.+........++.|+++ |+++.
T Consensus       147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv  178 (322)
T PRK13943        147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV  178 (322)
T ss_pred             -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEE
Confidence             137999999888766567888999998 99876

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.17  E-value=0.0055  Score=54.11  Aligned_cols=103  Identities=24%  Similarity=0.326  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc---CCceEe--CCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~---g~~~~i--~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.+   +....+  |..+ +....+.+.+..  -++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            4679999998 9999999999999999 899999988776554 222   221222  2222 122222222221  136


Q ss_pred             ccEEEEccCCH-----------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          265 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       265 ~d~v~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +|.++.+.+..                       ..++.+++.++++ |+++.+++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            89999888741                       1244555666776 8999998743

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.14  E-value=0.011  Score=53.24  Aligned_cols=80  Identities=19%  Similarity=0.272  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCceEe---CCCCCCccHHHHHHhhcC-
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTEFV---NPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~~i---~~~~~~~~~~~~~~~~~~-  262 (345)
                      ..+.+++|+|| +++|...+..+...|+ +++.+.|++++++.+. +    .+.+-.+   |..+ +.+......++.. 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence            46789999999 9999999999999999 9999999999987663 2    2332222   3333 2222222222222 


Q ss_pred             -CCccEEEEccCC
Q 019139          263 -GGVDYSFECIGN  274 (345)
Q Consensus       263 -gg~d~v~d~~g~  274 (345)
                       ..+|+.++++|-
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence             279999999984

>PRK06182 short chain dehydrogenase; Validated

Probab=97.14  E-value=0.0056  Score=55.49  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+++.+.+.+..  .+++|+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence            3578999998 9999999999888999 89999998887766555444322 23333 123333333221  24799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99873

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.13  E-value=0.0032  Score=60.30  Aligned_cols=109  Identities=19%  Similarity=0.262  Sum_probs=74.6

Q ss_pred             chhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHH
Q 019139          178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL  257 (345)
Q Consensus       178 ~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  257 (345)
                      +....+..+.+...++++++||-+|+| .|.++..+++..|+ +|++++.+++..+.+++.....-+....  .++.   
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~---  223 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR---  223 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh---
Confidence            333445556677888999999999985 57788888988898 8999999999999887643221111111  1221   


Q ss_pred             HhhcCCCccEEEEc-----cCC---HHHHHHHHHHhccCCeEEEEec
Q 019139          258 VDLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       258 ~~~~~gg~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                       ++ .+.+|.|+..     +|.   ...++.+.+.|+|+ |++++..
T Consensus       224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence             12 3478988643     343   24578888899998 9998754

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.12  E-value=0.0062  Score=52.70  Aligned_cols=102  Identities=25%  Similarity=0.411  Sum_probs=69.9

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcC-CceEeCCCCCCccHHHHHHhhc
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      ....+.++++|+-+|+|. |.+++++++..+. .+|++++.+++..+.++    .++ .+.+.....   +..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh-c
Confidence            456788999999999987 9999999988652 38999999998877664    455 232222111   22222222 2


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEe
Q 019139          262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2479999985543   34577788889997 998853

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.10  E-value=0.0022  Score=52.04  Aligned_cols=97  Identities=22%  Similarity=0.265  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCc--eEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~--~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      -.+.+++|+|+|+.|.+++..+...|+++|+.+.|+.+|.+.+ ++++..  ..+.+.+    +.+.+     ..+|++|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI   80 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence            3578999999999999999999999998899999998876655 455322  1333322    21111     2699999


Q ss_pred             EccCCHHH--HHHHHHHhccCCeEEEEeccC
Q 019139          270 ECIGNVSV--MRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       270 d~~g~~~~--~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+++.+..  -...+....+.-+.++.++.+
T Consensus        81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            99886531  122333222210477888753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0062  Score=55.46  Aligned_cols=78  Identities=17%  Similarity=0.260  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHH---hhcCCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLV---DLTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~---~~~~gg~d~v  268 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+...+.+.+ .|..+ .+++.+.+.   +...+.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence            3568999998 9999999999888999 89999998888777766555433 24333 122222232   2234579999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>PRK12742 oxidoreductase; Provisional

Probab=96.95  E-value=0.019  Score=50.59  Aligned_cols=101  Identities=23%  Similarity=0.282  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR-AKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~-~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+ ++++.+. .++++...+ .|..+ ...+.+.+.+  .+++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence            3679999998 9999999999999999 7766544 4444333 344554432 23322 1222223322  24799999


Q ss_pred             EccCCHH-------------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139          270 ECIGNVS-------------------------VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       270 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      .+.|...                         ....++..++.. |+++.+++..
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~  134 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN  134 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence            9987410                         113344455666 8999988643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.85  E-value=0.0067  Score=52.00  Aligned_cols=78  Identities=21%  Similarity=0.259  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---ceEeCCCCCCccHHHHHHhhcCC--CccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTDG--GVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~g--g~d~  267 (345)
                      -|.+|||+|+ +++|+..++-...+|- .||.+.+++++++.++..-.   ..+.|..+. ....+.+.++-..  ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~-~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADR-DSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccch-hhHHHHHHHHHhhCCchhe
Confidence            3689999976 9999999999999998 89999999999999886544   234444431 2222333333333  5678


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      ++++.|
T Consensus        82 liNNAG   87 (245)
T COG3967          82 LINNAG   87 (245)
T ss_pred             eeeccc
Confidence            888777

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.85  E-value=0.017  Score=49.00  Aligned_cols=103  Identities=27%  Similarity=0.346  Sum_probs=71.2

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ...++++++.++=+|+| .|..++++++..-..+|+++++++++.+..+    ++|.+.+....-   +..+.+.++.  
T Consensus        28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~--  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP--  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence            45678899977778986 3777888886554559999999999888764    578775544432   1223333222  


Q ss_pred             CccEEEEccCC--HHHHHHHHHHhccCCeEEEEecc
Q 019139          264 GVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       264 g~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+|.+|---|.  +..++.++..|+++ |++|.=..
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence            58988854332  34578888999997 99986654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.85  E-value=0.01  Score=50.16  Aligned_cols=93  Identities=24%  Similarity=0.265  Sum_probs=63.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC--
Q 019139          198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN--  274 (345)
Q Consensus       198 VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~--  274 (345)
                      |+|+|+ |.+|...++.+...|+ +|+++.+++++.+.  ..+.+.+. .+-  .+. +.+.+... ++|+||.++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~--~d~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL--FDP-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT--TCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee--hhh-hhhhhhhh-hcchhhhhhhhhc
Confidence            689998 9999999999999998 99999999998766  34443332 221  122 23333332 79999999984  


Q ss_pred             --HHHHHHHHHHhccC-CeEEEEeccC
Q 019139          275 --VSVMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       275 --~~~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                        ......+++.++.. -.+++.++..
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred             ccccccccccccccccccccceeeecc
Confidence              23356666666543 1478877754

...

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.84  E-value=0.014  Score=48.40  Aligned_cols=103  Identities=24%  Similarity=0.311  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .-.|.+++|.|.|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.+-.        .+.+.+     ...|+++.+
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~-----~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TLEEAL-----RDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE-
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CHHHHH-----hhCCEEEEC
Confidence            4678999999999999999999999999 99999999887766666676421        122222     257999999


Q ss_pred             cCCHHH-HHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139          272 IGNVSV-MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT  313 (345)
Q Consensus       272 ~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  313 (345)
                      +|..+. -.+-++.|+++ ..+..+|..    +.+++...+-.
T Consensus        86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~----d~Eid~~~L~~  123 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDG-AILANAGHF----DVEIDVDALEA  123 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TT-EEEEESSSS----TTSBTHHHHHT
T ss_pred             CCCccccCHHHHHHhcCC-eEEeccCcC----ceeEeeccccc
Confidence            998663 35778899996 666666654    34555544433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.82  E-value=0.015  Score=52.90  Aligned_cols=112  Identities=21%  Similarity=0.333  Sum_probs=69.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee----CCCCCCccHHHHHHhh--c
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVDL--T  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~-~i----~~~~~~~~~~~~~~~~--~  261 (345)
                      .+.+|+|+|| +++|...+--....|+ +++.+.+..++++.+    ++.+..+ ++    |..+ .++..+.+.+.  .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence            5789999999 9999988877778898 555555666655544    4455544 22    2222 12333333332  2


Q ss_pred             CCCccEEEEccCCH-------------------------HHHHHHHHHhccCC-eEEEEeccCCCCCceecC
Q 019139          262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAASGQEISTR  307 (345)
Q Consensus       262 ~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~  307 (345)
                      -|++|+.++..|-.                         .....++..|++.. |+|+.+++.++...+++.
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~  160 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR  160 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence            35899999988731                         22344555565332 999999987665554443

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=96.75  E-value=0.075  Score=49.03  Aligned_cols=138  Identities=17%  Similarity=0.136  Sum_probs=84.9

Q ss_pred             eeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcC---CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 019139          148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV  222 (345)
Q Consensus       148 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VlI~Ga-g~vG~~a~q~a~-~~G~~~v  222 (345)
                      .|-+|.++..+..+.  +.....++..-+ .+.|.|. |.+...   .-..+.|+|.+| +-+++..+..++ ..+..++
T Consensus        90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            466666665544331  111112222223 5566654 322222   234467888887 889988888888 5555589


Q ss_pred             EEEcCChhHHHHHHhcCC-ceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       223 i~~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |++++.. +.+..+.+|. +.++.|++        +..+....--+++|+.|.......+...+...--..+.+|..
T Consensus       166 vglTS~~-N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t  233 (314)
T PF11017_consen  166 VGLTSAR-NVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT  233 (314)
T ss_pred             EEEecCc-chhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence            9986654 4568888887 66666654        333433456789999999988888888887642346777763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.74  E-value=0.012  Score=50.07  Aligned_cols=90  Identities=31%  Similarity=0.395  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++...........+.. .       .++.+.+.     ..|+++.++
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~-------~~l~ell~-----~aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y-------VSLDELLA-----QADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E-------SSHHHHHH-----H-SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e-------eehhhhcc-----hhhhhhhhh
Confidence            458999999999999999999999999 999999988766544455542 1       12333333     378887776


Q ss_pred             CC-H----HHHHHHHHHhccCCeEEEEecc
Q 019139          273 GN-V----SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       273 g~-~----~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .. +    ..-...+..++++ ..+|.++-
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             ccccccceeeeeeeeeccccc-eEEEeccc
Confidence            62 1    1235667888886 88887764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.72  E-value=0.0064  Score=47.00  Aligned_cols=92  Identities=26%  Similarity=0.302  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHhc----CC-ceE-eCCCCCCccHHHHHHhhcCCCcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNF----GV-TEF-VNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~~~~----g~-~~~-i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      |+++||-+|+|. |.++..+++. .++ +|++++.+++..+.+++.    +. +.+ +...    ++  .......+++|
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~--~~~~~~~~~~D   72 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG----DA--EFDPDFLEPFD   72 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES----CC--HGGTTTSSCEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC----cc--ccCcccCCCCC
Confidence            578999999874 8888888884 677 899999999988877542    22 111 1111    22  11112223799


Q ss_pred             EEEEcc-CC---H------HHHHHHHHHhccCCeEEEE
Q 019139          267 YSFECI-GN---V------SVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       267 ~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~  294 (345)
                      +|+... ..   .      ..++.+.+.|+|+ |++++
T Consensus        73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi  109 (112)
T PF12847_consen   73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI  109 (112)
T ss_dssp             EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence            999876 21   1      2377888899997 99875

...

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.64  E-value=0.016  Score=50.39  Aligned_cols=102  Identities=21%  Similarity=0.181  Sum_probs=67.0

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCce-E-eCCCCCCccHHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTE-F-VNPKDHDKPIQQVLV  258 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~-~-i~~~~~~~~~~~~~~  258 (345)
                      +.+...++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++    ..+... + +...+    ..+.+ 
T Consensus        64 ~~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d----~~~~~-  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD----GKRGL-  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC----cccCC-
Confidence            3456677899999999986 3778888888764 238999999988666554    344321 1 11111    11111 


Q ss_pred             hhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                       ...+.+|+|+-+.......+.+.+.|+++ |++++.
T Consensus       138 -~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        138 -EKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             -ccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence             01237999987766556567888999998 998764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.63  E-value=0.037  Score=55.25  Aligned_cols=105  Identities=14%  Similarity=0.170  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---------cCCc-----eE--eCCCCCC
Q 019139          188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---------FGVT-----EF--VNPKDHD  250 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---------~g~~-----~~--i~~~~~~  250 (345)
                      ...+.+.|.+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+         .|..     .+  .|..+  
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD--  149 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK--  149 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence            4556678899999998 9999999999999999 89998888877654321         1211     11  12222  


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCCHH---------------HHHHHHHHhcc-CCeEEEEeccCC
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGNVS---------------VMRAALECCHK-GWGTSVIVGVAA  299 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~~~---------------~~~~~~~~l~~-~~G~~v~~G~~~  299 (345)
                         .+.+.+.. +++|++|.++|...               ....+++.+.. +.++||.++..+
T Consensus       150 ---~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        150 ---PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             ---HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence               12233322 47999999987531               12333444432 226899988753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.62  E-value=0.024  Score=55.42  Aligned_cols=78  Identities=24%  Similarity=0.375  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hH-HHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~-~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+++++++  ++ .+..++++...+ +|..+ .....+.+....  .+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence            5789999998 9999999999999999 788887643  22 223344554322 34433 122222222221  23799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      ++|.+.|
T Consensus       287 ~vi~~AG  293 (450)
T PRK08261        287 IVVHNAG  293 (450)
T ss_pred             EEEECCC
Confidence            9999988

>PRK04148 hypothetical protein; Provisional

Probab=96.61  E-value=0.012  Score=47.40  Aligned_cols=97  Identities=22%  Similarity=0.248  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      ..++.+++++|.| .|...+..+..+|. .|+++|.+++..+.+++.+.+.+.+.-- ..++  .+    .+++|+++..
T Consensus        14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~----y~~a~liysi   84 (134)
T PRK04148         14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EI----YKNAKLIYSI   84 (134)
T ss_pred             cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HH----HhcCCEEEEe
Confidence            3456889999999 88755556667898 9999999999999998888765544321 1121  11    1378999998


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      -..+.....+++..+.-+.-+++.-.
T Consensus        85 rpp~el~~~~~~la~~~~~~~~i~~l  110 (134)
T PRK04148         85 RPPRDLQPFILELAKKINVPLIIKPL  110 (134)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence            88877444444444432244454444

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.031  Score=49.21  Aligned_cols=79  Identities=23%  Similarity=0.329  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC---ceEe--CCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFV--NPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~---~~~i--~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ +.+..   -..+  |..+ ..++.+.+.+..  .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            3678999998 9999999998888899 799998887665433 33321   1112  2222 123333333322  137


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            8999998763

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.60  E-value=0.031  Score=47.81  Aligned_cols=101  Identities=21%  Similarity=0.237  Sum_probs=61.6

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCC-Cc
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      ...++++++||.+|+|+-+. +..+++.. +..+|++++.++..    +..+.+.+ .+..+  ....+.+.+.... ++
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~--~~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD--EEVLNKIRERVGDDKV   99 (188)
T ss_pred             hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC--hhHHHHHHHHhCCCCc
Confidence            34568999999999976444 44444443 43479999998754    11233211 12222  2233344444444 89


Q ss_pred             cEEEEc-c----CC------------HHHHHHHHHHhccCCeEEEEecc
Q 019139          266 DYSFEC-I----GN------------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       266 d~v~d~-~----g~------------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      |+|+.. .    |.            ...+..+.+.|+++ |++++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~  147 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF  147 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence            999952 1    21            34577888999997 99998654

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.58  E-value=0.0089  Score=52.36  Aligned_cols=102  Identities=21%  Similarity=0.254  Sum_probs=68.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEe-CCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFV-NPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i-~~~~~~~~~~~~~~~  259 (345)
                      +....+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++    .|...+. ...+....+      
T Consensus        68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~------  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY------  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC------
Confidence            4566778999999999986 47788888887753 389999999887766643    4443221 111100000      


Q ss_pred             hcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ...++||+|+-....+.....+.+.|+++ |++++.
T Consensus       141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence            11247999886655555567888999998 998764

>PRK08017 oxidoreductase; Provisional

Probab=96.58  E-value=0.016  Score=51.82  Aligned_cols=76  Identities=25%  Similarity=0.379  Sum_probs=53.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHH---HHHHhhcCCCccEEEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQ---QVLVDLTDGGVDYSFE  270 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~---~~~~~~~~gg~d~v~d  270 (345)
                      ++++|+|+ |++|...++.+...|+ +|+++.++.++.+.+++.+++.+. |..+ ...+.   +.+.....+.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence            47999998 9999999999999999 899999998888777777764432 3322 11222   2232333357888888


Q ss_pred             ccC
Q 019139          271 CIG  273 (345)
Q Consensus       271 ~~g  273 (345)
                      +.|
T Consensus        81 ~ag   83 (256)
T PRK08017         81 NAG   83 (256)
T ss_pred             CCC
Confidence            876

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.57  E-value=0.034  Score=43.54  Aligned_cols=104  Identities=21%  Similarity=0.306  Sum_probs=67.2

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .....+.++++|+-+|+|. |..+..+++..+..++++++.++...+.++    .++...+.....   +...... ...
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~-~~~   86 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALE-DSL   86 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccCh-hhc
Confidence            3445667788999999975 888999998875458999999998877764    344332211111   1000011 112


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+|+|+-....   ...++.+.+.|+++ |++++-.
T Consensus        87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            379999865432   23578888999997 9988653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.027  Score=52.90  Aligned_cols=79  Identities=18%  Similarity=0.186  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+    ++.|.+..   .|..+ .++..+.+....  -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence            4578999998 9999999999999999 888888888765533    33454332   23332 122222222221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.52  E-value=0.0069  Score=52.92  Aligned_cols=102  Identities=25%  Similarity=0.329  Sum_probs=67.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHH----HhcCCceEe-CCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRA----KNFGVTEFV-NPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~----~~~g~~~~i-~~~~~~~~~~~~~~~  259 (345)
                      +.+...+++|++||-+|+| .|..++-+++..|.. .|+.++..++-.+.+    +.++.+.+. ...+    -   ...
T Consensus        64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd----g---~~g  135 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD----G---SEG  135 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-----G---GGT
T ss_pred             HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc----h---hhc
Confidence            4577789999999999986 488888899888743 589999888655444    345665332 2221    0   011


Q ss_pred             h-cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE-ec
Q 019139          260 L-TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI-VG  296 (345)
Q Consensus       260 ~-~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~-~G  296 (345)
                      + ..++||.|+-+.+-+..-..+++.|+++ |++|. ++
T Consensus       136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~  173 (209)
T PF01135_consen  136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIG  173 (209)
T ss_dssp             TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEES
T ss_pred             cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEc
Confidence            1 1238999998888766567888999998 99987 44

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.013  Score=54.88  Aligned_cols=78  Identities=21%  Similarity=0.372  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~--~~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+    ++.|.+..   .|..+ .++..+.+.+.  ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence            4679999998 9999999999999999 899988988776533    34455432   23332 12222222221  125


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++++.|
T Consensus        84 ~iD~lVnnAG   93 (330)
T PRK06139         84 RIDVWVNNVG   93 (330)
T ss_pred             CCCEEEECCC
Confidence            7999999988

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.041  Score=48.88  Aligned_cols=101  Identities=22%  Similarity=0.259  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHHH----HHhcCCceE---eCCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~----~~~~g~~~~---i~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++.++.. +.+.    ++..+....   .|..+ +++..+.+.+...  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence            3578999998 9999999999888999 7888777543 2222    222233211   23332 1222222322221  


Q ss_pred             CCccEEEEccCCH-------------------HHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++|+++.+.|..                   ..++.+.+.+..+ |+++.+++
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            3689988877642                   2344455555665 88888875

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.034  Score=50.08  Aligned_cols=79  Identities=29%  Similarity=0.344  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++....   .|..+ .+++.+.+....  .+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            3578999998 9999999999999999 899998887754433 44443221   23332 122333333221  24789


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998773

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.042  Score=48.22  Aligned_cols=79  Identities=23%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCceE-eCCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~----~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.    ++..+...+ .|..+ ..++.+.+....  .+++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence            3679999998 9999999999888899 79999887654322    222333221 22222 122222222221  1378


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998773

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.46  E-value=0.037  Score=52.68  Aligned_cols=97  Identities=23%  Similarity=0.218  Sum_probs=67.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC---C-ceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---V-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g---~-~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .+|||+|+|.+|+.+++.+.+.|-.+|++++++.++.+.+....   . ...+|..+     .+.+.++.. ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence            46899999999999999988888449999999988887776553   2 12344433     233334433 35999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      .+.......+-.+++.+ =.++....+.
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            99866554444566665 5677776543

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.033  Score=49.28  Aligned_cols=77  Identities=29%  Similarity=0.425  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+...+ .|..+ .....+.+..  .+++|++|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence            4678999998 9999999999999999 8999988877665443 3443322 23332 1122222222  237899999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            8874

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.069  Score=47.33  Aligned_cols=79  Identities=24%  Similarity=0.191  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 9999999999999999 788888877754433    22233221   23332 122222222211  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.24  E-value=0.015  Score=49.01  Aligned_cols=101  Identities=22%  Similarity=0.242  Sum_probs=65.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC-CCCC--------------CccHHHHHHh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD  259 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~-~~~~--------------~~~~~~~~~~  259 (345)
                      ..+|+|+|+|.+|.-|+.+++.+|+ +++..+...++.+..+..++..+.. +.+.              +......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            3789999999999999999999999 8999999999888888877754433 1111              1122222222


Q ss_pred             hcCCCccEEEEcc--C---CHH-HHHHHHHHhccCCeEEEEeccC
Q 019139          260 LTDGGVDYSFECI--G---NVS-VMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       260 ~~~gg~d~v~d~~--g---~~~-~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ... .+|+++-+.  .   .+. .-+..++.|+++ ..++.+...
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            211 478888531  1   122 136777889997 889888764

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.029  Score=50.24  Aligned_cols=79  Identities=28%  Similarity=0.388  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .+.+|+|+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+.+.+.+..  .+++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 9999999999999999 898888887765443 34443222 23332 122222222221  1378999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998773

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.03  Score=49.10  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=51.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+++|+|+ |++|...+..+...|+ +|++++++.++.+.+++++....  +|..+ .+++.+.+..+..+++|+++.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence            46899998 9999998888888999 89999988776655554432222  23322 12333334444334899999887


Q ss_pred             CC
Q 019139          273 GN  274 (345)
Q Consensus       273 g~  274 (345)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            63

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.22  E-value=0.028  Score=55.65  Aligned_cols=73  Identities=29%  Similarity=0.315  Sum_probs=54.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +.++++|+|+|.|.+|++++.+++..|+ +|++.+..+.+.+.++++|+.. +....    ..+.+     ..+|+|+.+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~S   77 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVTS   77 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEEC
Confidence            4578899999999999999999999999 8999998777666677778743 32211    11122     147999998


Q ss_pred             cCCH
Q 019139          272 IGNV  275 (345)
Q Consensus       272 ~g~~  275 (345)
                      .|-+
T Consensus        78 pGi~   81 (488)
T PRK03369         78 PGFR   81 (488)
T ss_pred             CCCC
Confidence            8854

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.19  E-value=0.013  Score=53.33  Aligned_cols=101  Identities=23%  Similarity=0.324  Sum_probs=61.5

Q ss_pred             HHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139          185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       185 al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      -+.++.++++|++||-+|+| -|.++..+|+..|+ +|++++.+++..+.++    +.|....+....  .++    +++
T Consensus        53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~  124 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL  124 (273)
T ss_dssp             HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG-
T ss_pred             HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc
Confidence            35688899999999999997 57778888898899 9999999999888764    455432111111  111    112


Q ss_pred             cCCCccEEEE-----ccCC---HHHHHHHHHHhccCCeEEEEe
Q 019139          261 TDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       261 ~~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      . +.+|.|+.     .+|.   +..++.+.+.|+|+ |++++-
T Consensus       125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq  165 (273)
T PF02353_consen  125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQ  165 (273)
T ss_dssp             ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEE
T ss_pred             C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2 27887764     4443   23477888899998 998754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.17  E-value=0.053  Score=46.52  Aligned_cols=97  Identities=16%  Similarity=0.132  Sum_probs=61.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ++++.+|+-+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.+ ....  .+..+ +. . .+.+|+
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~-~-~~~fDl  115 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FG-Q-EEKFDV  115 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CC-C-CCCccE
Confidence            44588999999853 666666666554339999999988766654    3454432 1111  12211 11 1 348999


Q ss_pred             EEEccCC--HHHHHHHHHHhccCCeEEEEec
Q 019139          268 SFECIGN--VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+-....  +..+..+.+.|+++ |+++.+-
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            9864332  34577888999998 9998884

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.039  Score=48.30  Aligned_cols=77  Identities=18%  Similarity=0.254  Sum_probs=51.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+++|+|+ |++|...++.+...|+ +|+.++++.++.+.++..+... ..|..+ .+.+.+.+.....+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence            36899987 9999999888888899 8888888887776666555432 223333 123333222333337999999876


Q ss_pred             C
Q 019139          274 N  274 (345)
Q Consensus       274 ~  274 (345)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            4

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.068  Score=47.39  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC--Cce-E--eCCCCCCccHHHHHHhh--cCCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VTE-F--VNPKDHDKPIQQVLVDL--TDGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g--~~~-~--i~~~~~~~~~~~~~~~~--~~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. .+.  ... .  .|..+ +..+...+...  ..++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            3568999998 9999999999888999 7999999887655442 222  111 1  22222 12232222222  1237


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.073  Score=47.59  Aligned_cols=79  Identities=18%  Similarity=0.145  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +++.+.+++++.+..++   .+....   .|..+ .+.+...+.+..  .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence            3578999998 9999999988888999 78888887766544333   333221   22222 122222222221  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            8999999883

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.092  Score=47.33  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+..    .+.+....   +|..+ ..++.+.+.+..  .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999899999 899988877654322    22332221   23332 122333333322  23


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7899998775

>PRK14967 putative methyltransferase; Provisional

Probab=96.05  E-value=0.12  Score=45.54  Aligned_cols=99  Identities=22%  Similarity=0.212  Sum_probs=64.6

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ....++++++||-.|+|. |.+++.+++. +..++++++.++...+.+++    .+....+...    ++.+.   +..+
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~  100 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFR  100 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCC
Confidence            344567889999999986 8888888875 55589999999987776543    3433222221    22221   2234


Q ss_pred             CccEEEEccCC---------------------------HHHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|+|+...+-                           ...+..+.+.|+++ |+++++-
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            79999865210                           11345677889998 9998764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.01  E-value=0.059  Score=46.83  Aligned_cols=35  Identities=29%  Similarity=0.346  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.+|+|+|+|++|...++.+..+|..+++.+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            34789999999999999999999999899998876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.01  E-value=0.11  Score=45.84  Aligned_cols=78  Identities=21%  Similarity=0.261  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+++|+|+ |.+|...++.+...|+ .|+.+.+++++.+.+    +..+....   .|..+ +..+.+.+.+..  -++
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence            468999998 9999999999889999 799998887764433    33343322   23332 122333333221  136


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|.++.+.|.
T Consensus        83 id~vi~~ag~   92 (246)
T PRK05653         83 LDILVNNAGI   92 (246)
T ss_pred             CCEEEECCCc
Confidence            8999998864

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.037  Score=49.43  Aligned_cols=80  Identities=19%  Similarity=0.258  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eE--eCCCCCCccHHHHHHhhc--C
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      ..+.+++|+|+ |++|...+..+...|+ +|+++.+++++.+.+..    .+.. ..  .|..+ .+++.+.+.+..  .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence            34689999998 9999999999999999 89999888877554422    1221 12  23322 123333333221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        85 ~~~d~li~~ag~   96 (258)
T PRK06949         85 GTIDILVNNSGV   96 (258)
T ss_pred             CCCCEEEECCCC
Confidence            478999999883

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.11  Score=47.10  Aligned_cols=76  Identities=22%  Similarity=0.278  Sum_probs=48.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce----EeCCCCCCccHHHHHHhhc--CCCc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~----~i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+...    ..|..+ .+...+.+.+..  .+++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence            6899998 9999999999889999 788888877654433    2233321    234333 122222222221  2379


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.98  E-value=0.071  Score=47.72  Aligned_cols=78  Identities=26%  Similarity=0.302  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH---hcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK---NFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~---~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++...+..+   ..+.+..   .|..+ .++..+.+.+..  .++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999999999999 8888888754333333   2343321   23332 122233333322  247


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999887

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.95  E-value=0.049  Score=50.84  Aligned_cols=79  Identities=18%  Similarity=0.236  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce----EeCCCCCCccHHHHHHhhcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~----~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      .|.+++|+|+ +++|...+..+...|+ +|+.+++++++.+.+. +    .+...    .+|..+...+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            4789999998 9999998888888899 8999999988765442 1    22111    223332112233344444444


Q ss_pred             -CccEEEEccC
Q 019139          264 -GVDYSFECIG  273 (345)
Q Consensus       264 -g~d~v~d~~g  273 (345)
                       .+|++++++|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence             6779998876

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.94  E-value=0.038  Score=49.69  Aligned_cols=78  Identities=21%  Similarity=0.232  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCce-E--eCCCCCCccHHHHHHhhcC--CCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~~-~--i~~~~~~~~~~~~~~~~~~--gg~d  266 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+++. +... .  .|..+ ..+..+.+.+...  +.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence            4678999998 9999999999999999 899988888776655443 3221 1  23322 1222333333221  4789


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.94  E-value=0.026  Score=49.52  Aligned_cols=103  Identities=19%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.+...++++++||-+|+| .|..++.+++..+. ..|++++.+++..+.++    ++|.+.+.....   +..+..  .
T Consensus        69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--~  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--E  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--c
Confidence            4456678999999999986 37777788887653 26999999988776664    345432211111   111100  1


Q ss_pred             cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..++||+|+-..........+.+.|+++ |++++.
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            1237998886544445567788999998 998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.047  Score=49.01  Aligned_cols=81  Identities=22%  Similarity=0.355  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCceE----eCCCCCCccHHHHHHhh
Q 019139          192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF----VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g-~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-----~g~~~~----i~~~~~~~~~~~~~~~~  260 (345)
                      +..+.+++|+|+ | ++|...++.+...|+ +|+++++++++.+...+     ++...+    .|..+ +.+..+.+...
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence            345789999987 6 799999999999999 78888887766544321     443322    23332 12222222222


Q ss_pred             c--CCCccEEEEccCC
Q 019139          261 T--DGGVDYSFECIGN  274 (345)
Q Consensus       261 ~--~gg~d~v~d~~g~  274 (345)
                      .  .+++|+++.+.|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  2478999999884

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.13  Score=46.13  Aligned_cols=77  Identities=23%  Similarity=0.254  Sum_probs=50.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cC-Cc-e--EeCCCCCCccHHHHHHhhc---CCCcc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG-VT-E--FVNPKDHDKPIQQVLVDLT---DGGVD  266 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g-~~-~--~i~~~~~~~~~~~~~~~~~---~gg~d  266 (345)
                      .++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ .+ .. .  .+|..+ ..++.+.+....   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence            46899998 9999999998888999 89998888877665533 32 11 1  223333 122333333221   35899


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.045  Score=50.36  Aligned_cols=79  Identities=22%  Similarity=0.336  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--ceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ ++++.  ...   .|..+ .++..+.+.+..  .++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 899888888776544 44442  111   33333 122223332222  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.039  Score=49.66  Aligned_cols=78  Identities=18%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.    ..+... +  .|..+ +....+.+.+..  -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 9999999999999999 8999888877654332    223221 1  23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.++|
T Consensus        87 ~id~vi~~Ag   96 (263)
T PRK07814         87 RLDIVVNNVG   96 (263)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.052  Score=48.45  Aligned_cols=73  Identities=16%  Similarity=0.115  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcCCCcc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      +.++||+|+ |++|...++.+...|+ +|+++.++.++.+.+.    ..+....   .|..+     .+.+.....+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-----AIDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-----HHHHHHHhcCCCC
Confidence            357999998 9999999999999999 8888888776554432    2232211   23222     1233333345899


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      ++|.+.|
T Consensus        76 ~vi~~ag   82 (257)
T PRK09291         76 VLLNNAG   82 (257)
T ss_pred             EEEECCC
Confidence            9999887

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.035  Score=49.70  Aligned_cols=81  Identities=25%  Similarity=0.249  Sum_probs=52.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCc--eE--eCCCCCCccHHHHHHhhc--CC
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--EF--VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~--~~--i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .-++.+++|+|+ |++|...+..+...|+ +|+.+.++++..+.+.+ ..-.  ..  .|..+ +..+.+.+.+..  -+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFG   85 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            346789999998 9999999999999999 79999888766554433 2211  11  23322 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.+.|.
T Consensus        86 ~~d~vi~~ag~   96 (264)
T PRK12829         86 GLDVLVNNAGI   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.89  E-value=0.031  Score=50.98  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=70.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC-
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG-  273 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g-  273 (345)
                      ..+|.|+|.|.+|.-++.+|.-+|+ +|+..+.+.+|++.+..+....+--..+.+.++.+.+.     +.|++|..+= 
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI  241 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI  241 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence            3567888999999999999999999 99999999999998876544433222222233433333     5788887532 


Q ss_pred             ----CH-HHHHHHHHHhccCCeEEEEeccCC
Q 019139          274 ----NV-SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       274 ----~~-~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                          .+ -..++.++.++|+ +.++.+....
T Consensus       242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq  271 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ  271 (371)
T ss_pred             cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence                12 2357779999997 9999987644

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.88  E-value=0.048  Score=52.70  Aligned_cols=96  Identities=10%  Similarity=0.065  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.+.+|+|+|+|+.|.+++..+...|+.+++++.++.++.+ ++.+++....+.+        +.+.+.. ..+|+||.|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l-~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLI-KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHh-ccCCEEEEC
Confidence            45789999999999999999999999878999999877644 4445542122211        1222221 259999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ++++..+-. .+.++...=.++.++.+
T Consensus       250 T~a~~~vi~-~~~~~~~~~~~iDLavP  275 (414)
T PRK13940        250 VNVLEYIVT-CKYVGDKPRVFIDISIP  275 (414)
T ss_pred             cCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence            998653211 11222110246777763

>PRK06128 oxidoreductase; Provisional

Probab=95.88  E-value=0.093  Score=48.34  Aligned_cols=102  Identities=19%  Similarity=0.205  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--H----HHHHHhcCCceEe---CCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--K----FDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~----~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+.++.+  .    .+.++..+....+   |..+ .....+.+.+..  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence            4678999998 9999999998888999 7776654322  1    1223334443222   3322 122222222221  


Q ss_pred             CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+++|+++.+.|..                          ..++.++..++.+ |+++.+++.
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~  193 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI  193 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence            24799999988731                          1223344455676 899988764

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.052  Score=49.10  Aligned_cols=78  Identities=28%  Similarity=0.331  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC-Cce-EeCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-VTE-FVNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g-~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +.++ ... ..|..+ ++++.+.+....  .+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            568999998 9999999998888999 888888888776544 3344 221 123333 123333333222  2479999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +.+.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.83  E-value=0.049  Score=48.94  Aligned_cols=78  Identities=22%  Similarity=0.247  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++... .  .|..+ ..+..+.+.+..  .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence            4678999998 9999999999999999 89999888877665543 33211 1  22222 122223333221  24789


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        83 ~li~~ag   89 (263)
T PRK06200         83 CFVGNAG   89 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.048  Score=48.62  Aligned_cols=79  Identities=23%  Similarity=0.251  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~--i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.+..+...++....  .  .|..+ ..++.+.+.+..  .+++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4679999998 9999999998888999 8998888876555554432211  1  23322 122222222221  13789


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06484 short chain dehydrogenase; Validated

Probab=95.80  E-value=0.1  Score=51.98  Aligned_cols=104  Identities=27%  Similarity=0.367  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      ..+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++....   .|..+ +++..+.+.+..  .+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            35788999998 9999999999999999 8999998887766554 3443322   23332 122333333322  1479


Q ss_pred             cEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          266 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       266 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      |+++.+.|..                          ...+.++..++.+ |+++.+++..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~  403 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA  403 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence            9999988731                          1133334455665 8999998643

>PRK09186 flagellin modification protein A; Provisional

Probab=95.78  E-value=0.13  Score=45.72  Aligned_cols=78  Identities=22%  Similarity=0.420  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc----CCce----EeCCCCCCccHHHHHHhhcC-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~----g~~~----~i~~~~~~~~~~~~~~~~~~-  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+ +++    +...    ..|..+ ++++.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 788888877665433 222    2221    223333 1233333333221 


Q ss_pred             -CCccEEEEccC
Q 019139          263 -GGVDYSFECIG  273 (345)
Q Consensus       263 -gg~d~v~d~~g  273 (345)
                       +++|+++.+.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             46899999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.061  Score=48.54  Aligned_cols=79  Identities=20%  Similarity=0.306  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCce---EeCCCCCCccHHHHHHhhc-CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE---FVNPKDHDKPIQQVLVDLT-DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~---~i~~~~~~~~~~~~~~~~~-~g  263 (345)
                      .+.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +.+.   ..|..+ +.+..+.+.+.. .+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence            4678999998 9999999999999999 8999888877655432 11    3221   123332 122333333221 24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.05  Score=49.43  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce----EeCCCCCCccHHHHHHhhcC--CCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE----FVNPKDHDKPIQQVLVDLTD--GGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~----~i~~~~~~~~~~~~~~~~~~--gg~d~  267 (345)
                      +.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+.....    ..|..+ ++.+.+.+.....  +++|+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            568999998 9999999999888999 8999999888766554432221    123322 1222223332221  36899


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        82 vv~~ag~   88 (277)
T PRK06180         82 LVNNAGY   88 (277)
T ss_pred             EEECCCc
Confidence            9999885

>PRK09242 tropinone reductase; Provisional

Probab=95.77  E-value=0.18  Score=45.04  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---c--CCceE---eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---F--GVTEF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~---~--g~~~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+. +   .  +.+..   .|..+ ..++.+.+.+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 8988888877654432 2   1  22221   23322 122222222221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      -+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.76  E-value=0.055  Score=47.99  Aligned_cols=78  Identities=21%  Similarity=0.372  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce---EeCCCCCCccHHHHHHhhcC--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLTD--G  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~---~i~~~~~~~~~~~~~~~~~~--g  263 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+...   ..|..+ .....+.+.....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899988887665433    2334432   122222 1222233333222  3


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.76  E-value=0.13  Score=47.71  Aligned_cols=95  Identities=17%  Similarity=0.152  Sum_probs=59.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|+|+|+ |-+|...+..+...|+ +|++++++.++...+...+.+.+. |..+ +.    .+.+... ++|+||.+++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~----~l~~al~-g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PE----TLPPSFK-GVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HH----HHHHHHC-CCCEEEECCCC
Confidence            6899998 9999999999999999 899998887665554445554332 2222 11    2222222 68999998653


Q ss_pred             HH------------HHHHHHHHhccC-CeEEEEeccC
Q 019139          275 VS------------VMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       275 ~~------------~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      ..            ....+++.++.. -.+++.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            11            113455555543 1378887763

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.76  E-value=0.024  Score=55.51  Aligned_cols=94  Identities=15%  Similarity=0.126  Sum_probs=60.3

Q ss_pred             hhcCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhc
Q 019139          188 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       188 ~~~~~~~g~~Vl----I~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~  261 (345)
                      ...+.++|+.++    |+|+ |++|.+++|+++..|+ .|+++.+...+....+..+.+ .++|...  ..+.+.+....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence            346677888877    7765 9999999999999999 888876555533333333443 2344333  12222222211


Q ss_pred             CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                                    ..+...++.|.++ |+++.++...
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence                          2366777888887 9999998753

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.75  E-value=0.054  Score=49.83  Aligned_cols=96  Identities=29%  Similarity=0.456  Sum_probs=59.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeC-CCCCCccHHHHHHhhcCCCcc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVN-PKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~-~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      .+++++||=+|+| .|.+++..++ +|+++|++++.++...+.+++    .|....+. ...  .       +...++||
T Consensus       159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~--~-------~~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS--E-------DLVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT--S-------CTCCS-EE
T ss_pred             ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe--c-------ccccccCC
Confidence            5788899988875 2555555444 588899999999887666643    23222111 111  1       12225899


Q ss_pred             EEEEccCCHHH---HHHHHHHhccCCeEEEEeccCC
Q 019139          267 YSFECIGNVSV---MRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       267 ~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +|+-.+-....   ...+.+.++++ |.+++.|...
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            99988776542   34445568897 9999999864

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.75  E-value=0.16  Score=44.48  Aligned_cols=109  Identities=22%  Similarity=0.205  Sum_probs=74.1

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ...+.+...+||=+|.+ +|..++.+|..+. -.+++.++.++++.+.++    +.|.+..+..... -+..+.+.+...
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~~~  130 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRLLD  130 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhccC
Confidence            34555677888888864 5888888888886 338999999999988775    4677663222110 134555555445


Q ss_pred             CCccEEE-EccC--CHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          263 GGVDYSF-ECIG--NVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~-d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +.||+|| |+--  -+.-++.++++|++| |.++.=....
T Consensus       131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~  169 (219)
T COG4122         131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF  169 (219)
T ss_pred             CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence            6899888 4433  345689999999997 8887655443

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.72  E-value=0.25  Score=42.47  Aligned_cols=106  Identities=22%  Similarity=0.299  Sum_probs=63.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.....++++++|+=.|+| .|..++.+++......|++++.+++..+.+++    ++.+.+....   .+..+.+..+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~  107 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA  107 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC
Confidence            3455567888988888875 35566666765533389999999988776653    4543321111   12222222222


Q ss_pred             CCCcc-EEEEccCC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVD-YSFECIGN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d-~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       ..+| ++++.... ...++.+.+.|+++ |++++.-.
T Consensus       108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence             2234 44443222 35578888999998 99887754

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.69  E-value=0.065  Score=47.54  Aligned_cols=79  Identities=20%  Similarity=0.296  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+.+++.  ..+.+++.+....   .|..+ ..++.+.+.+..  .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999889999 8888877652  2233344443221   23322 123333333222  1379


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.13  Score=46.64  Aligned_cols=78  Identities=18%  Similarity=0.205  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ ++... .  .|..+ ...+.+.+....  -+++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            457999998 9999999988888898 89998888776654433 22211 1  22222 122222222221  247899


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.67  E-value=0.061  Score=52.98  Aligned_cols=77  Identities=31%  Similarity=0.410  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHhcCCceEeCCCCCCcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDKP  252 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~---------------------~~~~~~~~~g~~~~i~~~~~~~~  252 (345)
                      .+++|+|+|+|+.|+.++..++..|+ .|+.++..+                     ...+.++++|.+..++..-. .+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence            57899999999999999999999999 788887653                     24566788898765554221 11


Q ss_pred             HHHHHHhhcCCCccEEEEccCCH
Q 019139          253 IQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       253 ~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +  .+.++. ..+|.+|.++|..
T Consensus       218 ~--~~~~~~-~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDLL-EDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHHH-hcCCEEEEEeCCC
Confidence            1  111111 2699999999974

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.069  Score=49.12  Aligned_cols=79  Identities=23%  Similarity=0.322  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.    +.+.+. .  .|..+ .+++.+.+....  .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            3578999998 9999999998888999 8999999887655442    223322 1  23222 122222232221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.64  E-value=0.25  Score=41.18  Aligned_cols=44  Identities=30%  Similarity=0.424  Sum_probs=36.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +|.++|.|..|...+.-+...|+ +|++.+++.++.+.+.+.|+.
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~   46 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAE   46 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEE
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhh
Confidence            68899999999999988889999 899999999998888776643

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.63  E-value=0.32  Score=40.39  Aligned_cols=82  Identities=15%  Similarity=0.208  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|+|+|+|.+|.--++.+...|+ +|++++  ++..+.+++++.-. .+.+.    +.    +..-.++|+|+-++.
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~----~~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FS----NDDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cC----hhcCCCceEEEECCC
Confidence            46889999999999998888888999 788773  22223334444211 21111    10    001127899999998


Q ss_pred             CHHHHHHHHHHhccC
Q 019139          274 NVSVMRAALECCHKG  288 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~  288 (345)
                      ++. ++..+..++..
T Consensus        80 d~e-~N~~i~~~a~~   93 (157)
T PRK06719         80 QHA-VNMMVKQAAHD   93 (157)
T ss_pred             CHH-HHHHHHHHHHH
Confidence            877 66666666553

>PRK06196 oxidoreductase; Provisional

Probab=95.62  E-value=0.076  Score=49.27  Aligned_cols=78  Identities=21%  Similarity=0.231  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++.++.++.+.+ .++..-..  .|..+ ..+..+.+.+..  .+++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence            4578999998 9999999998888999 888888887765443 22221112  23332 122223333322  247999


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      ++.+.|
T Consensus       103 li~nAg  108 (315)
T PRK06196        103 LINNAG  108 (315)
T ss_pred             EEECCC
Confidence            999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.058  Score=48.17  Aligned_cols=79  Identities=20%  Similarity=0.228  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+.    ..+....   .|..+ ++.+.+.+.+..  .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4688999998 9999999999999999 8988888877654432    2232211   23322 122333333221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998773

>PRK06398 aldose dehydrogenase; Validated

Probab=95.60  E-value=0.09  Score=47.21  Aligned_cols=74  Identities=22%  Similarity=0.284  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++.+..     ... ...|..+ +.++.+.+.+..  .+++|+++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999998 9999999999999999 8888887765421     111 1123333 122333333322  23799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98773

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.60  E-value=0.27  Score=44.58  Aligned_cols=102  Identities=23%  Similarity=0.322  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------HH----HHHHhcCCceEeC-CCCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------KF----DRAKNFGVTEFVN-PKDH  249 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~~----~~~~~~g~~~~i~-~~~~  249 (345)
                      .+.+|+|+|+|++|..++..+...|..+++.+|.+.-                   |.    +.+.++.++--+. ..+.
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            4578999999999999999999999878888875421                   11    1122233221111 1110


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       -. .+.+.++....+|+|+||+.+...-..+.+.+....-.++.+|.
T Consensus       109 -i~-~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG  154 (268)
T PRK15116        109 -IT-PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG  154 (268)
T ss_pred             -cC-hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence             00 12223333347999999999865444455554443145555654

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.58  E-value=0.13  Score=47.65  Aligned_cols=91  Identities=21%  Similarity=0.368  Sum_probs=61.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|.|+|+|.+|...+..++..|. ..|+++++++++.+.+++.|....+.     .+..+.+     ...|+|+.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence            579999999999999998888884 37999999999888888877532111     1111111     257899988876


Q ss_pred             HHH---HHHHHHHhccCCeEEEEecc
Q 019139          275 VSV---MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       275 ~~~---~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...   +......++++ ..++.+|.
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            431   23333445665 66666664

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.56  E-value=0.24  Score=43.02  Aligned_cols=92  Identities=13%  Similarity=0.048  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+.+|+|+|+|.+|...+..+...|+ +|++++.... ....+...+.- .+....    +.+.  .+  .++|+||-++
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~----~~~~--~l--~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKE----FEPS--DI--VDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecC----CChh--hc--CCceEEEEcC
Confidence            46799999999999999988888998 8888765321 21222122211 111111    1000  01  2689999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEecc
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++. ++..+...+.. +.++.+..
T Consensus        79 ~d~e-lN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         79 NDPR-VNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCHH-HHHHHHHHHHh-CCcEEECC
Confidence            9977 55655555554 55555543

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.54  E-value=0.072  Score=54.63  Aligned_cols=76  Identities=29%  Similarity=0.346  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-Cc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK  251 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~---------------------~~~~~~~~g~~~~i~~~~~-~~  251 (345)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     ..+.++++|.+..++..-. +.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888887652                     4567788888766554321 11


Q ss_pred             cHHHHHHhhcCCCccEEEEccCCH
Q 019139          252 PIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       252 ~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+.    ++. ..+|.+|.++|..
T Consensus       388 ~~~----~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHH-hcCCEEEEeCCCC
Confidence            221    121 2699999999863

>PLN02366 spermidine synthase

Probab=95.54  E-value=0.1  Score=48.36  Aligned_cols=102  Identities=17%  Similarity=0.099  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCC---CccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~---~~~~~~~~~~~~~gg~d~  267 (345)
                      .+.++||++|+|. |.++..+++.-+.++|++++.+++-.+.+++.-...  -++....   ..+..+.+.+..++.+|+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv  168 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA  168 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence            4568899998865 556677777766668999999998888877642110  0111000   123334454443458998


Q ss_pred             EEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          268 SFECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ||--...          ...++.+.+.|+++ |.++.-+
T Consensus       169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            8854332          23467888999998 9997643

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.2  Score=44.27  Aligned_cols=42  Identities=19%  Similarity=0.224  Sum_probs=34.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      .+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence            46899998 9999998888888999 899999988877666543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.53  E-value=0.16  Score=45.55  Aligned_cols=103  Identities=19%  Similarity=0.310  Sum_probs=60.8

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-Hhc-CCce---EeCCCCCCccHHHHHHhhcC
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVTE---FVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~---~~~~~~-~~~-g~~~---~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.+.++.   ++.+.+ +++ +...   ..|..+ +++..+.+.+...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence            4678999987   4999999988888999 788775542   333323 333 2211   123332 1233333333322


Q ss_pred             --CCccEEEEccCCH-------H----------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139          263 --GGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 --gg~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                        +++|+++.+.|..       .                      ..+.++..++++ |+++.+++..
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~  150 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLG  150 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccC
Confidence              5799999887621       0                      112344556676 9999988654

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.51  E-value=0.24  Score=43.35  Aligned_cols=101  Identities=21%  Similarity=0.229  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCC-------CCCCcc-HHHHHHhhc--
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNP-------KDHDKP-IQQVLVDLT--  261 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~-------~~~~~~-~~~~~~~~~--  261 (345)
                      .++.+||+.|+| .|.-++.+|. .|+ +|++++.++...+.+ ++.+.......       .....+ ....+.++.  
T Consensus        33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            567899999997 4777777775 799 999999999988764 33333211100       000000 000111111  


Q ss_pred             -CCCccEEEEccCC--------HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 -DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 -~gg~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       .+.+|.++|+..-        ...++.+.++|+|+ |++++++.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence             2368999997531        23477888999998 98777655

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.077  Score=47.11  Aligned_cols=79  Identities=28%  Similarity=0.341  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE---FVNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~---~i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +   +.+...   ..|..+ .....+...+..  .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            4578999998 9999999998888999 899998887654333 2   222221   123322 122222222221  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998883

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.091  Score=47.19  Aligned_cols=79  Identities=23%  Similarity=0.336  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--CCce-E--eCCCCCCccHHHHHHhhc-CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVTE-F--VNPKDHDKPIQQVLVDLT-DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~--g~~~-~--i~~~~~~~~~~~~~~~~~-~gg~  265 (345)
                      ++.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++  +... .  .|..+ .....+...... .+++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence            3578999988 9999999998888999 8999988887665443 22  2111 1  12222 112222211111 2478


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        82 d~lv~~ag~   90 (263)
T PRK09072         82 NVLINNAGV   90 (263)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.50  E-value=0.067  Score=46.20  Aligned_cols=98  Identities=18%  Similarity=0.287  Sum_probs=60.5

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +.....++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++    .+...+ ....  .++.+.  .+ .+
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~~~~--~~-~~   94 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDLNNL--TF-DG   94 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cChhhC--Cc-CC
Confidence            334455678899999874 7777888775 77 89999999987666543    232211 1110  111110  11 23


Q ss_pred             CccEEEEccC----C----HHHHHHHHHHhccCCeEEEEe
Q 019139          264 GVDYSFECIG----N----VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       264 g~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+|+|+....    .    ...+..+.+.|+++ |.++++
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~  133 (197)
T PRK11207         95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV  133 (197)
T ss_pred             CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            7999987533    1    23466777889998 996544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.49  E-value=0.36  Score=43.92  Aligned_cols=103  Identities=14%  Similarity=0.263  Sum_probs=63.7

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHH-HHhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDR-AKNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~-~~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.+.++++   +.+. .++++....  .|..+ .+...+.+.+..  .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence            3678999987   4899999998888999 8888877742   2222 234453322  33333 122333333322  2


Q ss_pred             CCccEEEEccCCH-----------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +++|+++.+.|..                             ...+.++..+..+ |+++.+++..
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~  146 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG  146 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence            4799999998731                             1234455566776 9999887643

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.46  E-value=0.13  Score=45.74  Aligned_cols=104  Identities=25%  Similarity=0.287  Sum_probs=73.2

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +....++++|++|+=.|.| .|.+++-+|++.|. .+|+..+..++..+.|+    ++|....+....      ..+.+.
T Consensus        86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~------~Dv~~~  158 (256)
T COG2519          86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL------GDVREG  158 (256)
T ss_pred             HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe------cccccc
Confidence            3467889999999988876 48888899988774 68999999998887774    345444222211      112222


Q ss_pred             cCC-CccEEE-EccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~g-g~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+ .+|++| |.--.-..++.+.+.|+++ |+++++--
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            223 788655 6655557799999999998 99988753

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.46  E-value=0.13  Score=45.66  Aligned_cols=78  Identities=24%  Similarity=0.331  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~---~i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    ..+...   ..|..+ +.++.+.+....  .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            3578999998 9999999998888999 8888888877654332    223221   123322 122222222221  23


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.+
T Consensus        81 ~~d~vi~~a~   90 (258)
T PRK12429         81 GVDILVNNAG   90 (258)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.45  E-value=0.16  Score=42.74  Aligned_cols=77  Identities=19%  Similarity=0.245  Sum_probs=55.5

Q ss_pred             CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          192 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       192 ~~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      --.+.+|+|+|+|. +|..++..++..|+ +|+.+.+..+                     +..+.+.     .+|+||.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~l~-----~aDiVIs   93 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEHTK-----QADIVIV   93 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHHHh-----hCCEEEE
Confidence            35789999999986 59989999999999 7887766521                     1222222     4899999


Q ss_pred             ccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          271 CIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++.+..+..  +.++++ -.++.++.+
T Consensus        94 at~~~~ii~~--~~~~~~-~viIDla~p  118 (168)
T cd01080          94 AVGKPGLVKG--DMVKPG-AVVIDVGIN  118 (168)
T ss_pred             cCCCCceecH--HHccCC-eEEEEccCC
Confidence            9998764333  356776 788888874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00811 spermidine synthase; Provisional

Probab=95.45  E-value=0.12  Score=47.47  Aligned_cols=101  Identities=12%  Similarity=0.096  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce---EeCCCC---CCccHHHHHHhhcCCCcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKD---HDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~---~i~~~~---~~~~~~~~~~~~~~gg~d  266 (345)
                      .+.++||++|+|. |..+..+++..+.++|++++.+++-.+.+++.-...   ..+..+   ...+..+.+.. ..+.+|
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yD  152 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSFD  152 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCccc
Confidence            3467899998864 666777777767779999999999888887632110   000000   00233334433 345899


Q ss_pred             EEEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          267 YSFECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       267 ~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+--...          ...++.+.+.|+++ |.++.-.
T Consensus       153 vIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        153 VIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             EEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            88854321          22356778899998 9988753

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.45  E-value=0.15  Score=42.26  Aligned_cols=73  Identities=25%  Similarity=0.331  Sum_probs=50.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CccHHHHHHhhcCC-CccEEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYSF  269 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~----~~~~~~~~~~~~~g-g~d~v~  269 (345)
                      .+|+|.|. |.+|.+.+++.|+.++ -|.-++.++..     +.....+++.+..    ++...+.+.+...+ ++|.||
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe-----~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENE-----QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccc-----cccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            57899988 9999999999999999 78888776543     2233344443321    12233444455556 999999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      ...|+
T Consensus        78 CVAGG   82 (236)
T KOG4022|consen   78 CVAGG   82 (236)
T ss_pred             Eeecc
Confidence            98774

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.44  E-value=0.14  Score=46.88  Aligned_cols=100  Identities=25%  Similarity=0.384  Sum_probs=63.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      .+++.+|+=+|+| .|.+++.. +.+|+.+|+++|.++-..+.+++    .+.+.......     ........++.+|+
T Consensus       160 ~~~g~~vlDvGcG-SGILaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~-----~~~~~~~~~~~~Dv  232 (300)
T COG2264         160 LKKGKTVLDVGCG-SGILAIAA-AKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKG-----FLLLEVPENGPFDV  232 (300)
T ss_pred             hcCCCEEEEecCC-hhHHHHHH-HHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccc-----ccchhhcccCcccE
Confidence            5688999989985 36666554 45677789999999877666653    23332110000     00111122348999


Q ss_pred             EEEccCCH---HHHHHHHHHhccCCeEEEEeccCC
Q 019139          268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       268 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      |+-.+=..   ...+...+.++|+ |++++.|...
T Consensus       233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence            99776443   2356666788997 9999999764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.42  E-value=0.16  Score=44.89  Aligned_cols=104  Identities=25%  Similarity=0.280  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHH-----------------HhcCCceEeCCCCCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRA-----------------KNFGVTEFVNPKDHD  250 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~------~~~~~~-----------------~~~g~~~~i~~~~~~  250 (345)
                      +..+|+|+|.|++|.+++..+.+.|..++..++-++      .|+-.+                 +...+.--+...+ .
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-D  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-h
Confidence            357899999999999999999999998888876433      111111                 1111111111111 0


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCCHHH-HHHHHHHhccCCeEEEEeccCC
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      .-..+.+.++...++|+|+|++-+-.+ +..+..+.+.+ -.++.++..+
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag  156 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG  156 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence            111344556666699999999887553 23333455665 5666666533

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.41  E-value=0.39  Score=44.08  Aligned_cols=111  Identities=20%  Similarity=0.233  Sum_probs=71.5

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCCCCC--ccHH--------
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDHD--KPIQ--------  254 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~--~~~~~~~~~~~~g~~~~i~~~~~~--~~~~--------  254 (345)
                      ...+.+++|++|+=--+|.+|...+.+|+.+|++-+++..  -+.+|+++++.+|++.+.......  ....        
T Consensus        54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~  133 (300)
T COG0031          54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA  133 (300)
T ss_pred             HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH
Confidence            3567799999554434599999999999999995455543  467889999999998776554210  0001        


Q ss_pred             --------------------------HHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          255 --------------------------QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       255 --------------------------~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                                                .++.+-+.+.+|.++-.+|+.-++.-..+.|+.....+-+++.
T Consensus       134 ~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~v  202 (300)
T COG0031         134 EIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAV  202 (300)
T ss_pred             hCCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEE
Confidence                                      1222223346888888888777677777776643233444443

>PRK07985 oxidoreductase; Provisional

Probab=95.38  E-value=0.2  Score=45.97  Aligned_cols=102  Identities=18%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.  ++.+.+    ++.+....   .|..+ .++..+.+.+..  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            4578999998 9999999999999999 787765432  222222    23343221   23332 122333333322  


Q ss_pred             CCCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+++|+++.+.|..                          ..++.++..++.+ |+++.+++.
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~  187 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence            24789999887631                          1223444455676 899988764

>PRK06484 short chain dehydrogenase; Validated

Probab=95.38  E-value=0.18  Score=50.27  Aligned_cols=79  Identities=22%  Similarity=0.314  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce---EeCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~---~i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+.++.++.+.+ ++++...   .+|..+ ++++.+.+.+..  .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence            4678999998 9999999999999999 899988888775544 4455432   233332 123333333322  24799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998773

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.36  E-value=0.12  Score=45.46  Aligned_cols=78  Identities=18%  Similarity=0.175  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCceE-eCCCCCCccHHHHHHhhcC--CCccEEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF  269 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~--gg~d~v~  269 (345)
                      +.++||+|+ |++|...++.+...|+ +|+.++++++. .+.++..+...+ .|..+ .++..+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence            357999998 9999999999888999 88888876543 333444553221 23322 1233333333222  3689999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98873

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.34  E-value=0.11  Score=39.88  Aligned_cols=94  Identities=22%  Similarity=0.227  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+.+|||+|+|.+|..-++.+...|+ +|+++....   +..+  +.-... .+    .+.   .+  -.++++||-+.+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~----~~~---~~--l~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RR----EFE---ED--LDGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ES----S-G---GG--CTTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hh----hHH---HH--HhhheEEEecCC
Confidence            46889999999999999999999999 898887765   2122  111111 11    121   11  127999999999


Q ss_pred             CHHHHHHHHHHhccCCeEEEEeccCCCCCce
Q 019139          274 NVSVMRAALECCHKGWGTSVIVGVAASGQEI  304 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~  304 (345)
                      .+..-.......+.. |.++.....+...++
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF   99 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPELCDF   99 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence            877555555666655 777777654433333

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.33  E-value=0.35  Score=42.12  Aligned_cols=114  Identities=18%  Similarity=0.086  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .|.+|+|+|+|.+|..-++.+...|+ +|++++.... ....+.+.|- ..+...+.  . .+.   +  .++++||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~--~-~~d---l--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARCF--D-ADI---L--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCCC--C-HHH---h--CCcEEEEECC
Confidence            36799999999999999999999999 8888765432 2333333332 12222221  1 111   1  3799999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc--ccEEEEe
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGT  320 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~  320 (345)
                      +.+..-.......+.. |..+.+-......++-++  ..+.  +++|-=|
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~p--a~~~~g~l~iais  124 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFP--SIVDRSPVVVAIS  124 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEe--eEEEcCCEEEEEE
Confidence            9876455555555564 666654432333333333  3333  5665333

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.13  Score=46.09  Aligned_cols=81  Identities=23%  Similarity=0.286  Sum_probs=49.4

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhH-HHH----HHhcCCc--eE--eCCCCCCccHHHHHHhh
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKK-FDR----AKNFGVT--EF--VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~-~~~----~~~~g~~--~~--i~~~~~~~~~~~~~~~~  260 (345)
                      +..+.+|+|+|+ |++|...++-+... |+ +|+.+++++++ .+.    ++..+..  .+  .|..+ ..+..+.+.+.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence            456788999998 99999988876666 47 88888887664 332    2333321  12  23332 12222233332


Q ss_pred             cC-CCccEEEEccCC
Q 019139          261 TD-GGVDYSFECIGN  274 (345)
Q Consensus       261 ~~-gg~d~v~d~~g~  274 (345)
                      .. +++|+++.+.|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            22 489998887764

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.32  E-value=0.083  Score=48.27  Aligned_cols=45  Identities=24%  Similarity=0.335  Sum_probs=39.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      .++.+++|.|+|+.+.+++..++..|+.+|+++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            357999999999999999999999998799999998888665543

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.1  Score=46.66  Aligned_cols=77  Identities=16%  Similarity=0.159  Sum_probs=49.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC--c-eE--eCCCCCCccHHHHHHhhc--CCCc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~--~-~~--i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      +.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +..  + ..  .|..+ .+++.+.+.+..  .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence            358999998 9999999998888999 89999988877654432 221  1 11  23322 123333333322  1368


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |+++.+.|
T Consensus        80 d~lv~~ag   87 (257)
T PRK07024         80 DVVIANAG   87 (257)
T ss_pred             CEEEECCC
Confidence            99999877

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.097  Score=46.37  Aligned_cols=79  Identities=25%  Similarity=0.319  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ ..+....+....  .+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            3678999998 9999999999999999 899998887665433 34554322   22222 112222222221  24789


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.09  Score=46.91  Aligned_cols=79  Identities=20%  Similarity=0.285  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+    +..+.+..   .|..+ ++...+.+.+..  .+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            3578999998 9999999999889999 888888887765543    22343322   13322 122222222221  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.28  E-value=0.1  Score=46.64  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.++..+...+ .|..+ +.+..+.+.+..  .+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999998 9999999999888999 6766544 3444444443333221 23332 122333333322  2479999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +.+.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.26  E-value=0.098  Score=46.71  Aligned_cols=79  Identities=29%  Similarity=0.389  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..|....   .|..+ ...+.+.+.+..  .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence            4689999998 9999999998888999 899888887654432    22333221   23332 122333333222  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.+.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.087  Score=47.32  Aligned_cols=79  Identities=25%  Similarity=0.326  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCceE----eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTEF----VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~~~----i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+.+++++.+.+.    + .+...+    .|..+ .++..+.+.+..  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence            4678999998 9999999999999999 8998888877654332    1 111121    23333 122222232222  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999883

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.3  Score=43.10  Aligned_cols=102  Identities=19%  Similarity=0.221  Sum_probs=59.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      ++.+++|+|+ |++|...+..+...|+ +++.+.++.. +.+    .++..+....   .|..+ ..++.+.+.+..  .
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 6666555432 222    2223333211   12222 122222222221  2


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++|++|.+.|..                         ..++.+++.++.+ |+++.++..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence            4789999988731                         1123344455675 899988764

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.23  E-value=0.3  Score=45.71  Aligned_cols=102  Identities=14%  Similarity=0.058  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhHHHHHH-h----cCCceEeCCCCCCccHHHHHHhhcCCCcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGA-KAAGASRVIGIDIDPKKFDRAK-N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a-~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      +...+++|+|+|..|...+..+ ...+.++|.+++++.++.+.+. +    ++.+ +....    +..+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence            4567899999999998776544 4678889999999988765443 2    3432 21122    233333     2589


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh
Q 019139          267 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP  308 (345)
Q Consensus       267 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~  308 (345)
                      +|+.++++...+- . ..+++| -++..+|.+. +...++++
T Consensus       195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~-p~~~E~~~  232 (325)
T PRK08618        195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM-PDMQELPS  232 (325)
T ss_pred             EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC-cccccCCH
Confidence            9999988765333 3 888997 8999999854 34556666

>PRK08317 hypothetical protein; Provisional

Probab=95.23  E-value=0.27  Score=43.14  Aligned_cols=104  Identities=24%  Similarity=0.312  Sum_probs=68.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.+...+.++++||-+|+|. |..+..+++..+ ..++++++.++...+.+++.    +....+...+    ..+  ..+
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d----~~~--~~~   83 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD----ADG--LPF   83 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc----ccc--CCC
Confidence            34567788999999999975 888889988873 33899999999888877654    1111111111    000  012


Q ss_pred             cCCCccEEEEcc-----CC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.+|+|+..-     .. ...+..+.+.|+++ |.+++...
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            234788877532     22 34578888999998 99987753

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.23  E-value=0.091  Score=46.96  Aligned_cols=78  Identities=19%  Similarity=0.343  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+.+++|+|+ +++|.+.++.+...|+ +|+.+.+++..  .+.+++.+.+..   .|..+ .++..+.+.+..  .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999999999 78877665421  223344443321   23333 123333333221  2479


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |+++.+.|
T Consensus        85 D~lv~~ag   92 (251)
T PRK12481         85 DILINNAG   92 (251)
T ss_pred             CEEEECCC
Confidence            99999887

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.22  E-value=0.097  Score=44.27  Aligned_cols=94  Identities=23%  Similarity=0.304  Sum_probs=61.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|.|+|+ |-+|...++=|+..|. .|+++.++.+|....+..    .+...+ -.+.......+  .++|+||++.+..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~----~i~q~D-ifd~~~~a~~l--~g~DaVIsA~~~~   73 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV----TILQKD-IFDLTSLASDL--AGHDAVISAFGAG   73 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc----eeeccc-ccChhhhHhhh--cCCceEEEeccCC
Confidence            5788898 9999999999999999 899999999886543211    111111 01111111111  2899999988753


Q ss_pred             ---------HHHHHHHHHhcc-CCeEEEEeccC
Q 019139          276 ---------SVMRAALECCHK-GWGTSVIVGVA  298 (345)
Q Consensus       276 ---------~~~~~~~~~l~~-~~G~~v~~G~~  298 (345)
                               ...+.++..|+. +--|+.++|..
T Consensus        74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA  106 (211)
T COG2910          74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGA  106 (211)
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence                     234556777776 22589999874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.20  E-value=0.14  Score=45.81  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+    ++.+.+..+   |..+ ...+.+.+....  .+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 788888887654332    334443222   2222 122222222211  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.19  E-value=0.21  Score=43.24  Aligned_cols=82  Identities=30%  Similarity=0.394  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+++|+|.|.+|..+++.+...|+ +|++++.+.++.+.++ .+|+. .++..+           +....+|+++-|
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEec
Confidence            356899999999999999999999999 8999999888766654 34643 332211           111257888855


Q ss_pred             cCCHHHHHHHHHHhcc
Q 019139          272 IGNVSVMRAALECCHK  287 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~  287 (345)
                      ......-...++.|+.
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            4433333444555644

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.11  Score=47.32  Aligned_cols=78  Identities=24%  Similarity=0.334  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+    +..+.+..   .|..+ ..++.+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 788888877655433    22343221   23322 122222222221  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        83 ~id~li~nAg   92 (275)
T PRK05876         83 HVDVVFSNAG   92 (275)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PRK08589 short chain dehydrogenase; Validated

Probab=95.19  E-value=0.099  Score=47.35  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce---EeCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+   .+...   .+|..+ +.+....+.+..  .++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999998888999 89888887433333322   23221   123332 122222233222  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998773

>PLN02476 O-methyltransferase

Probab=95.17  E-value=0.17  Score=46.11  Aligned_cols=107  Identities=18%  Similarity=0.178  Sum_probs=69.2

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      ....+..+..+||=+|.+ +|..++.+|+.++ -..|+.++.+++..+.++    +.|...-+....  .+..+.+.++.
T Consensus       111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~  187 (278)
T PLN02476        111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI  187 (278)
T ss_pred             HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence            344556677899999874 4777777887764 226999999998877774    456653333222  23444444432


Q ss_pred             ----CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 ----DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ----~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                          .+.||.||--...   ...++.+++.|++| |.++.=..
T Consensus       188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv  229 (278)
T PLN02476        188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV  229 (278)
T ss_pred             hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence                2479987744332   24477888999997 98876544

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.12  Score=47.90  Aligned_cols=78  Identities=21%  Similarity=0.155  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cC-Cce---EeCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FG-VTE---FVNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g-~~~---~i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+. +    .+ ...   .+|..+ ..+..+.+.++.  
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence            3678999998 9999999998888999 8888888876644332 1    11 111   123333 122222222222  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus        91 ~~~iD~li~nAG  102 (313)
T PRK05854         91 GRPIHLLINNAG  102 (313)
T ss_pred             CCCccEEEECCc
Confidence            237899999877

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.11  Score=46.23  Aligned_cols=79  Identities=22%  Similarity=0.234  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---cCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE---FVNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~---~g~~~---~i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+. +   .+...   ..|..+ ++.+...+.+..  -+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999889999 8999888876654332 2   23221   223322 122322232221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      .+|+++.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            78999998873

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.15  E-value=0.23  Score=44.35  Aligned_cols=100  Identities=19%  Similarity=0.137  Sum_probs=59.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc--CCceE-eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~--g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+.+|+|+|+ |.+|...++.+...|+ +|+++.++.++.......  ++..+ .|..+   . .+.+.+....++|++|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~-~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G-SDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C-HHHHHHHhhcCCCEEE
Confidence            3578999998 9999999998888898 898888877664332211  12211 23322   1 1222222222689999


Q ss_pred             EccCCHH-------------HHHHHHHHhccC-CeEEEEeccC
Q 019139          270 ECIGNVS-------------VMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       270 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      .+.|...             ....+++.+... .++++.++..
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            8876421             134445555432 2688887753

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.14  Score=45.14  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-E--eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~--i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+... .  .|..+ ..++...+.+..  .+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4568999998 9999999999999999 8999998877654432    223222 1  22222 122222233222  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.13  E-value=0.17  Score=44.89  Aligned_cols=101  Identities=25%  Similarity=0.299  Sum_probs=59.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCceEeCCCCCCc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHDK  251 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~----~~~~~~~g~~~~i~~~~~~~  251 (345)
                      +.+|+|+|+|++|..++..+.+.|..+++.+|.+.-                   |    .+.++++..+.-+...+  .
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~   88 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E   88 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence            467999999999999999999999988988875431                   1    11122333322221111  1


Q ss_pred             cH-HHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          252 PI-QQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       252 ~~-~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+ .+...++....+|+|+||+.+...-..+.+.+....-.++..+.
T Consensus        89 ~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g  135 (231)
T cd00755          89 FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMG  135 (231)
T ss_pred             ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence            11 12233333347999999999876544455554443134444443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.085  Score=46.59  Aligned_cols=80  Identities=25%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC-c---eEeCCCCC-CccH---HHHHHhh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-T---EFVNPKDH-DKPI---QQVLVDL  260 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~-~---~~i~~~~~-~~~~---~~~~~~~  260 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+. +   ..+|..+. ..++   .+.+...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3578999998 9999999998888999 8999998887655432    2221 1   11222210 1122   2233333


Q ss_pred             cCCCccEEEEccCC
Q 019139          261 TDGGVDYSFECIGN  274 (345)
Q Consensus       261 ~~gg~d~v~d~~g~  274 (345)
                      ..+.+|+++.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33578999998883

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.12  E-value=0.26  Score=43.57  Aligned_cols=96  Identities=24%  Similarity=0.281  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      -+|.+||=+|+|+ |+++.-+| .+|+ .|+++|.+++..+.++.-....-  +++..   ...+.+... ++.||+|+.
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence            4788899999853 45554444 4678 99999999999998874322222  33432   222333221 148999986


Q ss_pred             -----ccCCHH-HHHHHHHHhccCCeEEEEec
Q 019139          271 -----CIGNVS-VMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       271 -----~~g~~~-~~~~~~~~l~~~~G~~v~~G  296 (345)
                           .+..+. .+..+.++++|+ |.+++.-
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence                 355544 467888999998 9887653

>PRK04457 spermidine synthase; Provisional

Probab=95.12  E-value=0.28  Score=44.44  Aligned_cols=97  Identities=13%  Similarity=0.133  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCc---eEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~---~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .+..+||++|+|+ |.++..+++.....++++++.+++-.+.+++. +..   .-+....  .+..+.+... .+.+|+|
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~--~Da~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE--ADGAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE--CCHHHHHHhC-CCCCCEE
Confidence            4557899999864 77888888877544899999999999888764 221   1111111  2344444432 3479987


Q ss_pred             E-EccCC---------HHHHHHHHHHhccCCeEEEE
Q 019139          269 F-ECIGN---------VSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       269 ~-d~~g~---------~~~~~~~~~~l~~~~G~~v~  294 (345)
                      + |...+         ...++.+.+.|+++ |.+++
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi  175 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV  175 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence            7 43221         35578888999998 99886

>PRK00536 speE spermidine synthase; Provisional

Probab=95.12  E-value=0.096  Score=47.31  Aligned_cols=101  Identities=13%  Similarity=-0.040  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEE-Ec
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-EC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~-d~  271 (345)
                      .+.++|||+|+|- |..+-.++|.-  ++|+.++-+++-.+.++++-....--.++....+...+.+...+.+|+|| |+
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            4458999997643 44556777765  38999999999888888742221101111112222233333335899766 65


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +-++.-.+.+.++|+++ |.++.-+.
T Consensus       148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        148 EPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             CCChHHHHHHHHhcCCC-cEEEECCC
Confidence            66666678889999998 98876543

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.12  Score=46.26  Aligned_cols=79  Identities=23%  Similarity=0.286  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCce-E--eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~-----g~~~-~--i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++     +... .  .|..+ ++++...+....  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            3678999998 9999999999999999 8888888877654332 22     2211 1  23322 122333332221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.+.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            2479999998873

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.09  E-value=0.3  Score=43.16  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhH--------HHHHHhcCCceEeCCCCCCccHHHHHH
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV  258 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~--~vi~~~~~----~~~--------~~~~~~~g~~~~i~~~~~~~~~~~~~~  258 (345)
                      -.+.+++|+|+|+.|..++..+...|..  +++.++++    +++        .++++.++... .   +  .++.+.+.
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEALK   96 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHHh
Confidence            4567999999999999999999999997  89999988    343        33444443211 0   0  12333332


Q ss_pred             hhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                           ++|++|.+++....-...++.++++ ..++.+..
T Consensus        97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn  129 (226)
T cd05311          97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN  129 (226)
T ss_pred             -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence                 4899999987322124666777775 66555543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.12  Score=46.26  Aligned_cols=77  Identities=18%  Similarity=0.289  Sum_probs=49.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+....   .|..+ ...+.+.+....  -+++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            57899998 9999999999999999 899998887654432    23343222   12222 122333333221  1378


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999999873

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.08  E-value=0.11  Score=47.22  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc------eEeCCCCC--CccHHHHHHh
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT------EFVNPKDH--DKPIQQVLVD  259 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~------~~i~~~~~--~~~~~~~~~~  259 (345)
                      -.+.+++|+|+ .++|.+.+..+...|+ +|+.+.+++++.+..+    ..+..      ...|..+.  .....+...+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            45788999988 8999999999999999 8999889888755443    22222      12233221  1122233333


Q ss_pred             hcCCCccEEEEccCC
Q 019139          260 LTDGGVDYSFECIGN  274 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~  274 (345)
                      ...|++|+.++..|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            445689999998874

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.07  E-value=0.11  Score=53.51  Aligned_cols=76  Identities=25%  Similarity=0.333  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHhcCCceEeCCCCC-C
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D  250 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~---------------------~~~~~~~~g~~~~i~~~~~-~  250 (345)
                      ..+.+|+|+|+|+.|+.++..++..|+ +|+++++.+.                     ..+.++++|.+...+..-. +
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            357899999999999999999999999 7988887532                     3455677787544433210 1


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCC
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ..+. .+.    ..+|.+|.++|.
T Consensus       404 i~~~-~~~----~~~DavilAtGa  422 (654)
T PRK12769        404 ISLE-SLL----EDYDAVFVGVGT  422 (654)
T ss_pred             CCHH-HHH----hcCCEEEEeCCC
Confidence            1111 111    268999998885

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.074  Score=47.92  Aligned_cols=77  Identities=26%  Similarity=0.349  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+..  .+... ..|..+ ++++.+.+....  .+.+|+++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD-DASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence            3568999998 9999999998888999 899988876654322  12221 123322 233333333322  24789999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99884

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.13  Score=46.61  Aligned_cols=77  Identities=21%  Similarity=0.244  Sum_probs=50.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCce---EeCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE---FVNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~---~i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++ .+...   ..|..+ ...+.+.+.+..  .+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            47999998 9999999998888999 89999898877665543 22221   123322 122223333221  2478999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      |.+.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998873

>PRK06194 hypothetical protein; Provisional

Probab=95.06  E-value=0.12  Score=47.08  Aligned_cols=78  Identities=24%  Similarity=0.369  Sum_probs=49.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cCCceE-e--CCCCCCccHHHHHHhh--cCCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTEF-V--NPKDHDKPIQQVLVDL--TDGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~---~g~~~~-i--~~~~~~~~~~~~~~~~--~~gg  264 (345)
                      +.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ .+   .+.... +  |..+ ..++.+.+...  ..++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            578999998 9999999998888999 888888876654433 22   233221 1  2222 12222222222  1247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.17  Score=44.42  Aligned_cols=74  Identities=19%  Similarity=0.233  Sum_probs=48.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ +.++.+.+... .+.+|+++.+.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence            5899988 9999999999888999 888888888776544 34444322 23332 12222222222 236899888765

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.12  Score=46.00  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+.+++++.+.+    ++.+....   .|..+ ..++.+.+....  .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            4679999998 9999999988888999 899998887654332    33343221   22222 122222222221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.2  Score=45.52  Aligned_cols=99  Identities=21%  Similarity=0.334  Sum_probs=58.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc-CCCccE
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT-DGGVDY  267 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~-~gg~d~  267 (345)
                      .+++|+|+|++|...+..+. .|+ +|+.+++++++.+.+    +..+.+..   .|..+ .+++.+.+.+.. .+++|+
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCCE
Confidence            57888999999999888874 788 898888887655433    22243221   23333 122333333221 247999


Q ss_pred             EEEccCCHH------------------HHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNVS------------------VMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~~------------------~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ++.+.|...                  ..+.+...+..+ |+++.+++.
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~  127 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ  127 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence            999988421                  123334455565 777776653

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.00  E-value=0.017  Score=47.46  Aligned_cols=93  Identities=20%  Similarity=0.246  Sum_probs=57.2

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CccHHHHHHhhcCCCccEEEEccC
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~----~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      |+|+|+|.+|.+.+..++..|. +|..+.+.+ +.+.+++.|........+.    +......  ....+.+|++|-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6889999999998888877999 899998888 7777776665322222000    0000000  112248999999987


Q ss_pred             CHHHHHHHHHH----hccCCeEEEEec
Q 019139          274 NVSVMRAALEC----CHKGWGTSVIVG  296 (345)
Q Consensus       274 ~~~~~~~~~~~----l~~~~G~~v~~G  296 (345)
                      +.. ...+++.    +.++ ..++.+-
T Consensus        77 a~~-~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   77 AYQ-LEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             GGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred             ccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence            654 4444444    4554 5666663

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.29  Score=44.85  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-H----HHHHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~----~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+.++.++ .    +.++..+.+..   .|..+ ...+.+.+.+..  .
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~~  122 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVREL  122 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999988888999 78777665422 1    12223343322   22222 122222222211  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       123 ~~iD~lI~~Ag~  134 (290)
T PRK06701        123 GRLDILVNNAAF  134 (290)
T ss_pred             CCCCEEEECCcc
Confidence            378999988773

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.98  E-value=0.21  Score=43.39  Aligned_cols=74  Identities=9%  Similarity=0.073  Sum_probs=45.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFEC  271 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~  271 (345)
                      .+++|+|+ |.+|...+..+... + +|++++++.++.+.+.+ ...-.++..+-  .+ .+.+.+....  ++|+++.+
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~-~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL--TD-PEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC--CC-HHHHHHHHHhcCCCCEEEEC
Confidence            57999988 99999888777666 6 89999988776554432 21112221111  11 1233333322  79999998


Q ss_pred             cCC
Q 019139          272 IGN  274 (345)
Q Consensus       272 ~g~  274 (345)
                      .|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            874

>PRK07677 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.12  Score=46.19  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=49.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce-Ee--CCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~-~i--~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+  |..+ ++.+.+.+.+..  .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence            468999998 9999999999999999 8999888876654332    223221 22  3222 122333333221  147


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            899999887

>PLN02253 xanthoxin dehydrogenase

Probab=94.94  E-value=0.12  Score=46.84  Aligned_cols=79  Identities=16%  Similarity=0.185  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--c-eE--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.++++++..+.+ .+++.  . ..  .|..+ .+.+.+.+....  .++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            3678999998 9999999988888999 888888776554333 33321  1 11  23332 122222222221  147


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.94  E-value=0.18  Score=45.78  Aligned_cols=78  Identities=19%  Similarity=0.252  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+    +.+++|....  .|..+ .++..+.+.+..  .
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence            4678999998 4  899999999999999 8888777653222    2233453322  23332 122333333322  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +.+|+++++.|
T Consensus        84 g~iD~lVnnAG   94 (271)
T PRK06505         84 GKLDFVVHAIG   94 (271)
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.94  E-value=0.19  Score=48.22  Aligned_cols=91  Identities=29%  Similarity=0.383  Sum_probs=56.5

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHh--cCC--ce-EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKN--FGV--TE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~--~g~--~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      |+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+  .+.  .. .+|..+     .+.+.++.. +.|+|++|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HHHHHHHHT-TSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HHHHHHHHh-cCCEEEEC
Confidence            68889999999999998887643 79999999998776643  222  11 122222     223444443 46999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEe
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|.......+-.++..+ -.++..
T Consensus        75 ~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             CccchhHHHHHHHHHhC-CCeecc
Confidence            99765444555566665 677773

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.93  E-value=0.43  Score=42.27  Aligned_cols=102  Identities=18%  Similarity=0.167  Sum_probs=59.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHH----HHHHhcCCceE---eCCCCCCccHHHHHHhhcC--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLTD--G  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~----~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~~--g  263 (345)
                      +.++||+|+ |.+|...+..+...|+ +++.+.+ +.++.    ..+++.+....   .|..+ +.++...+.+...  +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence            578999998 9999998888888999 6665543 32222    12233343221   23322 1222222222211  3


Q ss_pred             CccEEEEccCC----------H---------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          264 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       264 g~d~v~d~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ++|++|.+.|.          .               ...+.+.+.++.. |+++.+++..
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            78999999873          1               1133445556676 8999998743

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.93  E-value=0.14  Score=47.61  Aligned_cols=78  Identities=21%  Similarity=0.213  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---Cc-eE--eCCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g---~~-~~--i~~~~~~~~~~~~~~~~--~~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+ +++.   .. ..  .|..+ .....+.+.+.  ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence            4678999998 9999999998888998 899888887765443 2332   11 11  23322 12222222222  123


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999887

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.92  E-value=0.15  Score=45.66  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE----eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF----VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Gag---~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~----i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|++   ++|.+.++.+...|+ +|+.+.++++..+.++++....+    +|..+ +++..+.+.+..  .+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence            46789999874   899999999888999 88888777544444444322111    23322 122333333222  247


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        84 iD~lv~nAg   92 (252)
T PRK06079         84 IDGIVHAIA   92 (252)
T ss_pred             CCEEEEccc
Confidence            999999877

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.92  E-value=0.18  Score=47.41  Aligned_cols=35  Identities=31%  Similarity=0.350  Sum_probs=31.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +.+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999988898888763

>PRK08643 acetoin reductase; Validated

Probab=94.90  E-value=0.14  Score=45.70  Aligned_cols=78  Identities=17%  Similarity=0.235  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.    ..+....   .|..+ ++...+.+.+..  .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            468899998 9999999999999999 8988888876544332    2232221   23322 122233333221  147


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998863

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.90  E-value=0.26  Score=39.99  Aligned_cols=32  Identities=31%  Similarity=0.505  Sum_probs=28.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +|+|+|+|++|...+..+...|.++++.++..
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48899999999999999999999888888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.90  E-value=0.075  Score=43.95  Aligned_cols=77  Identities=21%  Similarity=0.203  Sum_probs=47.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHH----HhcCCceEeC---CCCCCccHHHHHHhhc--CCC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRA----KNFGVTEFVN---PKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~--~~~~~~~----~~~g~~~~i~---~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +++|+|+ +++|...++.+...|..+|+.+.++  .++.+.+    +..+....+.   ..+ .+++...+.+..  .+.
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            6899998 9999998888887777688888888  3433322    3345322221   221 123333333332  248


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999885

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.89  E-value=0.47  Score=42.23  Aligned_cols=106  Identities=21%  Similarity=0.280  Sum_probs=73.1

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ......++|++||=+|+| +|-+|..+++..|-..|+++|-++.-++.+++    .|... +..-.  .+ ++.+. +..
T Consensus        44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~d-Ae~LP-f~D  117 (238)
T COG2226          44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GD-AENLP-FPD  117 (238)
T ss_pred             HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--ec-hhhCC-CCC
Confidence            344556689999988776 59999999999986699999999988777753    23222 11111  11 11111 223


Q ss_pred             CCccEEEEccCC------HHHHHHHHHHhccCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ..+|++.-+.|=      +.++.++.+-|+|+ |+++++.+..
T Consensus       118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~  159 (238)
T COG2226         118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK  159 (238)
T ss_pred             CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence            378888776662      35688899999998 9999998854

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.89  E-value=0.15  Score=45.54  Aligned_cols=79  Identities=25%  Similarity=0.379  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce---EeCCCCCCccHHHHHHhhcC--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLTD--G  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~---~i~~~~~~~~~~~~~~~~~~--g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.    ..+...   ..|..+ +..+.+.+.+...  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999888999 8999988877655443    223221   123332 1223222222211  3


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.12  Score=46.16  Aligned_cols=80  Identities=19%  Similarity=0.240  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|++.|+.++++.++..    .+++.+....   +|..+ +..+.+.+....  .+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 999999999999999944888888765544    2233443321   23332 122222222221  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.15  Score=45.61  Aligned_cols=79  Identities=18%  Similarity=0.271  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-H-HHH---HHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDR---AKNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~-~~~---~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.++++++ . .+.   ++..+....   .|..+ +.+..+.+.+..  .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999988 9999999999999999 8888877543 2 122   223343221   23222 122333333222  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            478999999873

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.11  Score=46.39  Aligned_cols=74  Identities=23%  Similarity=0.321  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.++++.++    +..+... .  .|..+ .+++.+.+....  .+.+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            4688999998 9999999999888999 88888887654    1122211 1  23322 122323332221  247899


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      +|.+.|
T Consensus        79 vi~~ag   84 (252)
T PRK07856         79 LVNNAG   84 (252)
T ss_pred             EEECCC
Confidence            999887

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.88  E-value=0.17  Score=47.56  Aligned_cols=34  Identities=35%  Similarity=0.422  Sum_probs=30.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4679999999999999999999999899999875

>PRK08264 short chain dehydrogenase; Validated

Probab=94.87  E-value=0.13  Score=45.22  Aligned_cols=75  Identities=23%  Similarity=0.284  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+.+++|+|+ |.+|...++.+...|+++|+.++++.++.+.   .+... .  .|..+ ...+.+.+.. . +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~-~-~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEA-A-SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHh-c-CCCCEEE
Confidence            4578999988 9999999999999998678888887765432   22221 1  22222 1222222221 1 3689999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>TIGR00477 tehB tellurite resistance protein TehB

Probab=94.87  E-value=0.16  Score=43.74  Aligned_cols=99  Identities=18%  Similarity=0.216  Sum_probs=59.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.+.....++.+||-+|+| .|..+..+++ .|. .|++++.++...+.+++    .+..  +....  .+...  ..+ 
T Consensus        22 l~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~--~d~~~--~~~-   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA--YDINA--AAL-   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe--ccchh--ccc-
Confidence            3344445556789989885 4667777766 477 89999999887766543    2322  11110  11110  011 


Q ss_pred             CCCccEEEEccC-----C---HHHHHHHHHHhccCCeEEEEe
Q 019139          262 DGGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       262 ~gg~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+.+|+|+.+.-     .   ...+..+.+.|+++ |.++++
T Consensus        92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~  132 (195)
T TIGR00477        92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV  132 (195)
T ss_pred             cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence            237999886422     1   24567788889998 986555

Part of a tellurite-reducing operon tehA and tehB

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.15  Score=45.65  Aligned_cols=78  Identities=21%  Similarity=0.297  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCce---EeCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~---~i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.++++++..+.+++   .+...   ..|..+ ..+..+.+.+..  .++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 79988887754333332   23221   123322 122222222221  247


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|++|.+.|
T Consensus        83 id~vi~~ag   91 (263)
T PRK08226         83 IDILVNNAG   91 (263)
T ss_pred             CCEEEECCC
Confidence            899999887

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.84  E-value=0.16  Score=45.40  Aligned_cols=35  Identities=34%  Similarity=0.484  Sum_probs=30.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +.+|+|.|+|++|..+++.+.++|.++++.+|.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            37899999999999999999999998888877543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=94.83  E-value=0.19  Score=45.75  Aligned_cols=105  Identities=19%  Similarity=0.321  Sum_probs=71.4

Q ss_pred             hhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHH
Q 019139          182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQ  255 (345)
Q Consensus       182 a~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~  255 (345)
                      ++..+.+..++++|++||=+|+|- |.+++-+|+..|. +|++++.+++..+.++    +.|...-  +...+    +  
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d----~--  131 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD----Y--  131 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc----c--
Confidence            344567889999999999999964 7778888888899 9999999999877664    4565511  11111    1  


Q ss_pred             HHHhhcCCCccEEE-----EccCC---HHHHHHHHHHhccCCeEEEEeccC
Q 019139          256 VLVDLTDGGVDYSF-----ECIGN---VSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       256 ~~~~~~~gg~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                        +++. +.||-|+     +.+|.   +.-+..+-+.|+++ |++++-...
T Consensus       132 --rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~  178 (283)
T COG2230         132 --RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSIT  178 (283)
T ss_pred             --cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEec
Confidence              0111 2366554     34554   23467788889998 998776653

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.21  Score=44.67  Aligned_cols=72  Identities=21%  Similarity=0.303  Sum_probs=45.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+++++++ +..+.... +....  .|..+    . +.+.+.. +++|+++.
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~----~-~~~~~~~-~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK----E-ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC----H-HHHHHhc-CCCCEEEE
Confidence            578999998 9999999999999999 888887765 22222111 11112  22222    1 2222322 36999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.82  E-value=0.16  Score=45.53  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=48.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      +++|+|+ +++|...++.+...|+ +|+.+++++++.+.+.    +.+....  .|..+ .++..+.+.+..  .+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            6899998 9999999998888999 8999888877654332    2231112  23222 122333333222  247999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.81  E-value=0.45  Score=40.84  Aligned_cols=76  Identities=25%  Similarity=0.251  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c----CCceE-eCCCCCCccHHHHHHhhcCCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~----g~~~~-i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+.++.++.+.+.+ +    +.... .+..+    . +.+.+.. .+.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~-~~~~~~~-~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----D-AARAAAI-KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----H-HHHHHHH-hcCC
Confidence            5678999997 9999998888888898 88888888776554432 2    22211 11111    1 1111211 2689


Q ss_pred             EEEEccCCHH
Q 019139          267 YSFECIGNVS  276 (345)
Q Consensus       267 ~v~d~~g~~~  276 (345)
                      ++|.+++...
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999877544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.80  E-value=0.2  Score=41.06  Aligned_cols=96  Identities=18%  Similarity=0.160  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~-~~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....    +..+.     -.++|+++.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence            456889999999999999998888874489999988876554 44555321 01111    11111     137999999


Q ss_pred             ccCCHHH----HHHHHHHhccCCeEEEEeccC
Q 019139          271 CIGNVSV----MRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       271 ~~g~~~~----~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++....    .......++++ ..++.++..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~  118 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN  118 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence            9886431    11122446776 777777653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.79  E-value=0.39  Score=43.17  Aligned_cols=102  Identities=17%  Similarity=0.163  Sum_probs=66.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      +.....++++++||=+|+| .|.++..+++.....+|++++.++...+.+++.-...-+...    +..+ .  .....+
T Consensus        23 ll~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~f   94 (258)
T PRK01683         23 LLARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQAL   94 (258)
T ss_pred             HHhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCc
Confidence            3355566788999999986 367778888876444999999999988877654221111111    1111 0  122378


Q ss_pred             cEEEEccC-----C-HHHHHHHHHHhccCCeEEEEec
Q 019139          266 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       266 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+|+....     . ...+..+.+.|+++ |++++..
T Consensus        95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            98886533     2 24578888999998 9988753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.79  E-value=0.21  Score=44.82  Aligned_cols=78  Identities=18%  Similarity=0.334  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHH---H-HHHhcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF---D-RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Gag---~vG~~a~q~a~~~G~~~vi~~~~~~~~~---~-~~~~~g~~~~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|++   ++|.+.++.+...|+ +|+.+.++++..   + ..++++....+  |..+ .++..+.+....  .
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence            46789999873   899999998888999 788877765432   2 22333332222  3222 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +.+|+++.+.|
T Consensus        87 g~ld~lv~nAg   97 (258)
T PRK07533         87 GRLDFLLHSIA   97 (258)
T ss_pred             CCCCEEEEcCc
Confidence            47999999876

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.17  Score=45.29  Aligned_cols=77  Identities=21%  Similarity=0.311  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCce-E--eCCCCCCccHHHHHHhhcCCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTE-F--VNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~~-~--i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.    + .+... .  .|..+ .+++.+.+..  -++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~--~g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE--AGD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH--hCC
Confidence            3689999998 9999999998888999 8999988877654432    1 13221 1  22222 1222222222  147


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.77  E-value=0.16  Score=45.16  Aligned_cols=76  Identities=20%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceE---eCCCCCCccHHHHHHhhcC--CCccEEE
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF  269 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d~v~  269 (345)
                      +++|+|+ |++|...+..+...|+ +|+++++++++.+.+.. ++....   .|..+ ..++.+.+.+...  +++|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            6899998 9999999999999999 89999998877655433 343221   23322 1223333332221  3799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            88763

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.75  E-value=0.11  Score=47.34  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHhcC-C-ceEeCCCCCCccH---HHHHHhhcC
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFG-V-TEFVNPKDHDKPI---QQVLVDLTD  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~----~~~~~~~g-~-~~~i~~~~~~~~~---~~~~~~~~~  262 (345)
                      -.|+.|||+|+ +++|++.++=...+|+ +++.++.+++.    .+..++.| + ...+|..+. ++.   .+.+++.. 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~-eei~~~a~~Vk~e~-  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDR-EEIYRLAKKVKKEV-  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCH-HHHHHHHHHHHHhc-
Confidence            36899999988 8999997777777788 77777766643    33334434 1 234454431 233   33333333 


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      |.+|++++.+|-
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence            379999999883

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.75  E-value=0.2  Score=44.30  Aligned_cols=79  Identities=23%  Similarity=0.240  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHhcCCce-Ee--CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~----~~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |.+|...+..+...|+ +|++++++.++...    ++..+... ++  |..+ ...+.+.+.+..  .+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4578999998 9999999988888899 89999888654332    22333322 11  2222 122222222221  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.74  E-value=0.27  Score=45.21  Aligned_cols=36  Identities=22%  Similarity=0.339  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .+.+++|+|+|++|.+++..+...|+++|+++.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999999888899996699988875

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.17  Score=45.08  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcC--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--GG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg  264 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.    +.+....   .|..+ ..+..+.+.+...  +.
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHGR   85 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            568999998 9999999999999999 8999988876544332    2333211   23322 1222222322221  36


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899998887

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.73  E-value=0.14  Score=46.64  Aligned_cols=128  Identities=18%  Similarity=0.163  Sum_probs=85.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC---------CccHHHHHHhhcC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVDLTD  262 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~---------~~~~~~~~~~~~~  262 (345)
                      --++.++++.|.|-.|+.++..++.+|+ .|...+...++.+..+++|+.-.-..++.         .+++...-.++..
T Consensus       161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a  239 (356)
T COG3288         161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA  239 (356)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence            3456788999999999999999999999 88888888888787787887432111111         1223222222221


Q ss_pred             ---CCccEEEEccC--C---HH-HHHHHHHHhccCCeEEEEeccCCCCCceecChhh--hcc-ccEEEEeee
Q 019139          263 ---GGVDYSFECIG--N---VS-VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ--LVT-GRVWKGTAF  322 (345)
Q Consensus       263 ---gg~d~v~d~~g--~---~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~~-~~~i~g~~~  322 (345)
                         .++|+||-+.=  +   |. ....+...++|| ..+|.+.... +.+.+..-..  ... +++|+|..+
T Consensus       240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~-GGNce~t~pg~~v~~~gV~iig~~n  309 (356)
T COG3288         240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAET-GGNCELTEPGKVVTKNGVKIIGYTN  309 (356)
T ss_pred             HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhc-CCCcccccCCeEEEeCCeEEEeecC
Confidence               27999998743  1   22 246777899997 9999997643 3444443332  234 899999864

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.18  Score=44.66  Aligned_cols=77  Identities=17%  Similarity=0.283  Sum_probs=48.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c--CCce-E--eCCCCCCccHHHHHHhhc--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVTE-F--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~--g~~~-~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      +.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+..    .  +... +  .|..+ .+.+.+.+.+..  .
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            467999998 9999998888888898 88888888776554321    1  2211 1  23332 123333333222  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            47999999886

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.18  Score=46.56  Aligned_cols=78  Identities=19%  Similarity=0.196  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh----c-CCce-E--eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----F-GVTE-F--VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~----~-g~~~-~--i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+ ++    . +... .  +|..+ .++..+.+.++.  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence            5678999998 9999999998888899 888888877654322 11    1 1111 1  23322 122222333322  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.++|
T Consensus        93 ~~~iD~li~nAg  104 (306)
T PRK06197         93 YPRIDLLINNAG  104 (306)
T ss_pred             CCCCCEEEECCc
Confidence            237999999887

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.72  E-value=0.18  Score=45.11  Aligned_cols=79  Identities=22%  Similarity=0.326  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++.  ..+.+++.+....   .|..+ .++..+.+.+..  .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence            3678999998 9999999999999999 8887765432  2233334443221   22222 122333333221  2379


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.71  E-value=0.31  Score=44.54  Aligned_cols=82  Identities=20%  Similarity=0.255  Sum_probs=59.7

Q ss_pred             HhhcCC-CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          187 WNTAKV-EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       187 ~~~~~~-~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+...+ -.|.+|+|+|.|. +|.-++.++...|+ +|+.+.+...                     ++.+.++     .
T Consensus       149 l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~---------------------~l~~~~~-----~  201 (286)
T PRK14175        149 LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK---------------------DMASYLK-----D  201 (286)
T ss_pred             HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------hHHHHHh-----h
Confidence            344443 4789999999965 99999999999999 7877754321                     2222222     4


Q ss_pred             ccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          265 VDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       265 ~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|++|.++|.+..+..  +.++++ ..++.+|..
T Consensus       202 ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~  232 (286)
T PRK14175        202 ADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT  232 (286)
T ss_pred             CCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence            8999999998765554  468897 889999975

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.70  E-value=0.22  Score=43.90  Aligned_cols=78  Identities=13%  Similarity=0.151  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+    ++.+.+..   .|..+ +++..+.+.+..  -+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 8999998888888999 888888888765443    23343321   23222 122322222221  14


Q ss_pred             -CccEEEEccC
Q 019139          264 -GVDYSFECIG  273 (345)
Q Consensus       264 -g~d~v~d~~g  273 (345)
                       .+|+++.+.|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence             7999999986

>PRK07574 formate dehydrogenase; Provisional

Probab=94.70  E-value=0.31  Score=46.64  Aligned_cols=35  Identities=29%  Similarity=0.386  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++..
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~  225 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHR  225 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCC
Confidence            46799999999999999999999999 899998765

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.17  Score=45.75  Aligned_cols=78  Identities=24%  Similarity=0.373  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cC--Cc-eEe--CCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FG--VT-EFV--NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~---~g--~~-~~i--~~~~~~~~~~~~~~~~~--  261 (345)
                      ++.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+.. ++   .+  .. .++  |..+ +.+..+.+.+..  
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            3578999998 9999999999999999 899988877654432 22   11  11 111  3322 122222333222  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence            137899999887

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.16  Score=45.08  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--CCce-E--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVTE-F--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~--g~~~-~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+... ++  +... .  .|..+ +....+.+....  .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            3568999998 9999999988888899 8888888776544332 22  2221 1  12222 122222222221  147


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999998884

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.67  E-value=0.23  Score=45.40  Aligned_cols=79  Identities=24%  Similarity=0.304  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhHHHHHH-----hcCC---ceEeCCCCCCccHHHHHHhhcC
Q 019139          193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGV---TEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~-a~q~a~~~G~~~vi~~~~~~~~~~~~~-----~~g~---~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +-|++.+|+|+ .++|.. |-++|+ .|. +|+.+.|+++|++..+     +.++   ..++|..+.+. .-+.+++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence            45689999999 899977 677777 999 8999999999987663     3443   22456655333 3455555555


Q ss_pred             C-CccEEEEccCC
Q 019139          263 G-GVDYSFECIGN  274 (345)
Q Consensus       263 g-g~d~v~d~~g~  274 (345)
                      + .+-+.++++|-
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            5 78888898884

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.64  E-value=0.22  Score=44.64  Aligned_cols=34  Identities=35%  Similarity=0.487  Sum_probs=29.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|+|+|++|..++..+.+.|..+++.+|.+
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4789999999999999999999999888888643

>PRK08328 hypothetical protein; Provisional

Probab=94.64  E-value=0.17  Score=44.93  Aligned_cols=34  Identities=41%  Similarity=0.493  Sum_probs=30.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4679999999999999999999999889888743

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.63  E-value=0.2  Score=44.80  Aligned_cols=77  Identities=29%  Similarity=0.440  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+. +++....   .|..+ .....+.+.+..  .+++|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            578999998 9999999999999999 8999988887665443 3332211   12222 122222222221  247899


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      ++.+.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            999876

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.63  E-value=0.33  Score=43.04  Aligned_cols=74  Identities=30%  Similarity=0.302  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      .+.++||+|+ |.+|...+..+...|+ +|++++++.     ....+... .  .|..+ ...+.+.+.+..  .+++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999888999 888887765     12222211 1  22222 122233222221  136899


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9998874

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.62  E-value=0.26  Score=43.14  Aligned_cols=34  Identities=24%  Similarity=0.381  Sum_probs=30.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus        28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4679999999999999999999999889988876

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.21  Score=44.55  Aligned_cols=78  Identities=27%  Similarity=0.364  Sum_probs=48.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce--E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~--~--i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ +.+....  .  .|..+ .+.+...+.+..  .+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            458999998 9999999888888898 899988887765443 2232111  1  22222 122222222221  13689


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.65  Score=41.25  Aligned_cols=37  Identities=24%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~  231 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+... +++++
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~   41 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEE   41 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHH
Confidence            3678999998 9999999999999999 777653 44443

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.59  E-value=0.25  Score=47.39  Aligned_cols=96  Identities=17%  Similarity=0.149  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.+.++||+|+|-+|.+++..+...|...|+++.++.++.. +++++|+. ++..++    ..+.+.     .+|+||.+
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence            36789999999999999999999999889999999888754 66788854 222221    222222     59999999


Q ss_pred             cCCHHH---HHHHHHHhccCCe-EEEEeccC
Q 019139          272 IGNVSV---MRAALECCHKGWG-TSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~---~~~~~~~l~~~~G-~~v~~G~~  298 (345)
                      ++++.-   -...-+.++.... -++.++++
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            887532   2233344443212 46777764

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.57  E-value=0.19  Score=46.49  Aligned_cols=34  Identities=29%  Similarity=0.279  Sum_probs=29.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4679999998 8999999999999999 88888776

>PRK05717 oxidoreductase; Validated

Probab=94.57  E-value=0.21  Score=44.64  Aligned_cols=79  Identities=20%  Similarity=0.308  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhcC--CCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d  266 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++....   .|..+ ..+..+.+.+...  +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4678999998 9999999998888999 888887776554433 34443221   22322 1222222333222  3689


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998873

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.56  E-value=0.29  Score=44.50  Aligned_cols=92  Identities=18%  Similarity=0.108  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC---CceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g---~~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      ..+.+++|+|+|++|.+.+..+...|+ +|++++++.++.+.+ +.+.   ....+..       .+    .....+|++
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-------~~----~~~~~~Div  182 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-------DE----LPLHRVDLI  182 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-------hh----hcccCccEE
Confidence            457889999999999999988888898 899988887765433 3332   1111111       11    111368999


Q ss_pred             EEccCCHH--HH---HHHHHHhccCCeEEEEecc
Q 019139          269 FECIGNVS--VM---RAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       269 ~d~~g~~~--~~---~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++++...  ..   ......++++ ..++.+-.
T Consensus       183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            99988531  01   1123457775 67777754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.56  E-value=0.2  Score=45.11  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ +  ++|.+.++.+...|+ +|+.+.+++...+.+    ++.|....  .|..+ +++..+.+.+..  .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 4  799999888888999 788777664222222    23343322  34433 123333333322  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +.+|+++.+.|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            47999998876

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.55  E-value=0.2  Score=45.31  Aligned_cols=77  Identities=19%  Similarity=0.251  Sum_probs=49.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC--c-eE--eCCCCCCccHHHHHHhhc--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--T-EF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      +.+++|+|+ |.+|...+..+...|+ +|++++++.++.+.+.    ..+.  . ..  .|..+ ++++.+ +.+..  .
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence            467899998 9999999998888999 8888888776554332    2221  1 11  23332 122322 33322  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            478999998773

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.55  E-value=0.15  Score=44.75  Aligned_cols=73  Identities=23%  Similarity=0.247  Sum_probs=47.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCC-CccEEEEc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~  271 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+.++.++     ..... ...|..+ ...+.+.+.+.... ++|+++.+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEEC
Confidence            568999998 9999999999999998 88888887654     11111 1123332 12333334333333 68999998


Q ss_pred             cCC
Q 019139          272 IGN  274 (345)
Q Consensus       272 ~g~  274 (345)
                      .|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.54  E-value=0.22  Score=44.32  Aligned_cols=79  Identities=20%  Similarity=0.341  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+....   .|..+ .+.+.+.+....  .+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999988999 888888887664433    22232221   23322 122322232221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.52  E-value=0.22  Score=45.51  Aligned_cols=36  Identities=42%  Similarity=0.459  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -.+.+++|+|+ +++|...++.+...|+ +|+.++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            35789999998 9999999998888999 787776543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.51  E-value=0.78  Score=35.51  Aligned_cols=93  Identities=19%  Similarity=0.183  Sum_probs=61.7

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV  277 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~  277 (345)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+-   .-.+.+.+..-..++.++-+++....
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhhhHHhhcCccccCEEEEccCCHHH
Confidence            5788999999999999999765 899999999999999988854 333222   11234444433378988888876542


Q ss_pred             HH---HHHHHhccCCeEEEEec
Q 019139          278 MR---AALECCHKGWGTSVIVG  296 (345)
Q Consensus       278 ~~---~~~~~l~~~~G~~v~~G  296 (345)
                      -.   ..++.+.+. .+++..-
T Consensus        76 n~~~~~~~r~~~~~-~~ii~~~   96 (116)
T PF02254_consen   76 NLLIALLARELNPD-IRIIARV   96 (116)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEEE
T ss_pred             HHHHHHHHHHHCCC-CeEEEEE
Confidence            22   233444454 5665443

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=94.51  E-value=0.18  Score=44.01  Aligned_cols=100  Identities=21%  Similarity=0.188  Sum_probs=62.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +....+++++++||-+|+|. |..+..+++.. . ++++++.+++..+.++    ..+.+.+-....   +..+   .+.
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~---~~~  140 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWK---GWP  140 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---Cccc---CCC
Confidence            34566788999999998863 55666666654 3 7999999887766554    334432111111   1111   111


Q ss_pred             -CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          262 -DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       262 -~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                       .+.+|+|+-...-......+.+.|+++ |++++.
T Consensus       141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence             247998886655445567788999998 998754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.50  E-value=0.2  Score=45.34  Aligned_cols=78  Identities=23%  Similarity=0.313  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ +   ..+....   .|..+ .......+....  -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999989999 898888877654333 2   2233211   22222 122222222222  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.49  E-value=0.39  Score=42.73  Aligned_cols=106  Identities=20%  Similarity=0.202  Sum_probs=67.1

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      ....+..+..+||-+|.| .|..++.+++.++ ..+++.++.+++..+.+++    .|...-+....  .+..+.+.++.
T Consensus        61 ~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~  137 (234)
T PLN02781         61 SMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLL  137 (234)
T ss_pred             HHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHH
Confidence            344556677899988874 4666666777653 3489999999988777753    45433222221  23344444432


Q ss_pred             ----CCCccEEEEccC---CHHHHHHHHHHhccCCeEEEEec
Q 019139          262 ----DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       262 ----~gg~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                          .+.||+||--..   -...+..+++.+++| |.+++-.
T Consensus       138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence                247998885432   134477888999997 9887644

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.46  E-value=0.23  Score=44.28  Aligned_cols=79  Identities=19%  Similarity=0.343  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+....   .|..+ +.++.+.+....  .+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence            5789999998 9999999988888999 899998887654432    23343221   23322 122333333221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PLN02244 tocopherol O-methyltransferase

Probab=94.45  E-value=0.22  Score=46.88  Aligned_cols=98  Identities=21%  Similarity=0.279  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      +++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++    .+...-+....  .+..+  ..+..+.+|+|
T Consensus       117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~~--~~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADALN--QPFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCccc--CCCCCCCccEE
Confidence            678899989986 36677788887788 99999999987666543    23321111110  01100  01223479999


Q ss_pred             EEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139          269 FECIG-----N-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       269 ~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +..-.     . ...+..+.+.|+++ |++++...
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            86433     1 23577888999998 99988653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.43  E-value=0.29  Score=43.79  Aligned_cols=79  Identities=19%  Similarity=0.169  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~---~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++++..+   ...+.+....   +|..+ .+...+.+.+..  .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 7888777632212   2223343211   23322 122222222221  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PLN03139 formate dehydrogenase; Provisional

Probab=94.42  E-value=0.41  Score=45.83  Aligned_cols=45  Identities=20%  Similarity=0.228  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG  239 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g  239 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++.....+..++.|
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g  242 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG  242 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence            57799999999999999999999999 8999887643333333344

>PLN03075 nicotianamine synthase; Provisional

Probab=94.41  E-value=0.3  Score=44.88  Aligned_cols=98  Identities=19%  Similarity=0.143  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcC-----CceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFG-----VTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g-----~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      +.++|+-+|+|+.++.++.+++.+. ..+++.+|.+++..+.+++.-     ...-+....  .+..+..  ...++||+
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~--~~l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVT--ESLKEYDV  198 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhcc--cccCCcCE
Confidence            7789999999999998888887654 237999999999888887543     122122211  1121110  01248999


Q ss_pred             EEEcc------CC-HHHHHHHHHHhccCCeEEEEec
Q 019139          268 SFECI------GN-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~d~~------g~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ||-.+      .. ...+..+.+.|++| |.++.-.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            99764      22 34578888999997 8877543

>PRK06720 hypothetical protein; Provisional

Probab=94.40  E-value=0.27  Score=41.33  Aligned_cols=79  Identities=25%  Similarity=0.266  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H---hcCCce-E--eCCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-F--VNPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~---~~g~~~-~--i~~~~~~~~~~~~~~~~--~~g  263 (345)
                      .+.+++|+|+ +++|...+..+...|+ +|+.++++++..+.. +   +.+... .  .|..+ ..++.+.+.+.  ..+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAFS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 8999999888888999 899888876654322 2   234332 1  22221 12222222211  124


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            78999998874

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.40  E-value=0.14  Score=45.92  Aligned_cols=107  Identities=18%  Similarity=0.261  Sum_probs=65.2

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHH-HHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQ-QVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~-~~~~~  259 (345)
                      +....+++||++|+=-|.| .|.++..++++.| -.+|+..+.++++.+.++    ..|....+....  .|.. +-..+
T Consensus        32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceecccccc
Confidence            5567889999999988764 3777777887765 338999999999888774    456543222111  1111 01111


Q ss_pred             hcCCCccEEE-EccCCHHHHHHHHHHh-ccCCeEEEEec
Q 019139          260 LTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~G  296 (345)
                      -....+|.|| |.-..-..+..+.+.| +++ |+++.+-
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs  146 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS  146 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence            1123688666 6555445789999999 897 9988874

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.37  E-value=0.14  Score=41.30  Aligned_cols=34  Identities=29%  Similarity=0.453  Sum_probs=29.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|.|+|++|...+..+...|..+++.+|..
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4689999999999999999999999888888743

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.36  E-value=0.23  Score=43.77  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+    +..+....   .|..+ ..++.+.+....  .++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            578999998 9999999998888999 899998887654432    22232221   12222 122333333221  137


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998774

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.28  E-value=0.27  Score=43.36  Aligned_cols=79  Identities=23%  Similarity=0.214  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      ++.+++|+|+ |.+|...+..+...|+ .|+...++.++.+.+ ...+... .  .|..+ .+.+.+.+.+..  .+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            3578999998 9999999998888998 788877776665544 3333322 1  22222 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK12743 oxidoreductase; Provisional

Probab=94.27  E-value=0.24  Score=44.26  Aligned_cols=78  Identities=19%  Similarity=0.103  Sum_probs=46.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHH----HHHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~----~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+. ++.++.+    .++..+....   .|..+ .......+.+..  .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            468999998 9999999999999999 776654 3444332    2233454322   23322 122222222221  13


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.27  E-value=0.89  Score=42.44  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=32.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR  234 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~  234 (345)
                      .+|.|+|+|.+|.-.++.+...|+ +|+..+.+++..+.
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence            579999999999998888888999 99999998776543

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.24  E-value=0.95  Score=40.66  Aligned_cols=96  Identities=22%  Similarity=0.204  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .++.+||=+|+| .|..+..+++. |. +|++++.+++..+.+++    .|...-+....  .+.. .+.....+.+|+|
T Consensus        43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~--~d~~-~l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH--CAAQ-DIAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE--cCHH-HHhhhcCCCCCEE
Confidence            456788888886 47778888775 77 89999999988877754    23211111111  1221 2222333579998


Q ss_pred             EEcc-----CC-HHHHHHHHHHhccCCeEEEEe
Q 019139          269 FECI-----GN-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       269 ~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +...     .. ...+..+.+.|+|+ |+++++
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            8532     22 23478888999998 999765

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.24  E-value=0.44  Score=42.09  Aligned_cols=83  Identities=22%  Similarity=0.272  Sum_probs=57.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH--hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK--NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +++|.|+|.+|...++.+...|. +|+.++.++++.+...  ++... ++..+.   .-.+.++++--..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~---t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA---TDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence            57899999999999999999999 9999999999877633  35543 332222   11344555433489999999997


Q ss_pred             HHHHHHHHHHh
Q 019139          275 VSVMRAALECC  285 (345)
Q Consensus       275 ~~~~~~~~~~l  285 (345)
                      .. .+..+-.+
T Consensus        77 d~-~N~i~~~l   86 (225)
T COG0569          77 DE-VNSVLALL   86 (225)
T ss_pred             CH-HHHHHHHH
Confidence            54 44444333

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.17  E-value=0.39  Score=42.47  Aligned_cols=34  Identities=35%  Similarity=0.384  Sum_probs=29.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +.+|+|.|+|++|...+..+..+|..+++.+|.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4789999999999999999999999888888543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.15  E-value=0.24  Score=44.19  Aligned_cols=77  Identities=21%  Similarity=0.283  Sum_probs=48.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce--Ee--CCCCCCccHHHHHHhhc--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--FV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~--~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      +.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +    .+...  .+  |..+ +++..+.+.+..  .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            468999998 9999999998888999 8888888776543332 1    22111  11  2222 122222232221  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        80 ~~id~vv~~ag   90 (259)
T PRK12384         80 GRVDLLVYNAG   90 (259)
T ss_pred             CCCCEEEECCC
Confidence            47899999887

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.09  E-value=0.46  Score=47.97  Aligned_cols=94  Identities=15%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      ++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...++-...    -.+.+++..-..+|.++-+++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence            688999999999999999999998 8999999999999999888654443222    12333333223788888777764


Q ss_pred             HHH---HHHHHHhccCCeEEEEe
Q 019139          276 SVM---RAALECCHKGWGTSVIV  295 (345)
Q Consensus       276 ~~~---~~~~~~l~~~~G~~v~~  295 (345)
                      ...   -...+...+. .+++.-
T Consensus       493 ~~~~~iv~~~~~~~~~-~~iiar  514 (558)
T PRK10669        493 YEAGEIVASAREKRPD-IEIIAR  514 (558)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEEE
Confidence            422   2233444554 566554

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.09  E-value=0.13  Score=44.79  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcC-
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~-  262 (345)
                      .+.....+||-+|.+ +|..++.+|+++  +. +|+.++.++++.+.++    +.|...-+....  .+..+.+.++.. 
T Consensus        41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~  116 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELAND  116 (205)
T ss_dssp             HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHT
T ss_pred             HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhc
Confidence            334456789999985 488888888876  45 8999999999888774    456543333322  234444444432 


Q ss_pred             ---CCccEEE-EccCC--HHHHHHHHHHhccCCeEEEEeccC
Q 019139          263 ---GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 ---gg~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                         +.||.|| |+--+  ..-+..++++|+++ |.++.=...
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l  157 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL  157 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence               3799877 55332  12367788999997 888766543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=94.08  E-value=0.23  Score=45.62  Aligned_cols=42  Identities=29%  Similarity=0.372  Sum_probs=37.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      .+.+|+|+|+|+.|.+++..+...|+++|+.++++.++.+.+
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            457899999999999999999999998899999998876654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.08  E-value=0.3  Score=43.97  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.+.+.+...+.++    +.+....  .|..+ .++..+.+.+..  .
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence            4678999984   5899999999889999 7877655443223332    2232222  23332 223333333322  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            479999998763

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.07  E-value=0.29  Score=43.27  Aligned_cols=78  Identities=19%  Similarity=0.249  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce-Ee--CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~-~i--~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+    ++.+... ++  |..+ ...+.+.+....  .+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 888888877664433    2223222 11  2222 122222222221  13


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.06  E-value=0.26  Score=47.10  Aligned_cols=35  Identities=29%  Similarity=0.259  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999899999876

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.06  E-value=0.78  Score=41.19  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=67.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +.......++.+||=+|+|. |.++..+++.. +. +|++++.++.-.+.+++.+.+-+.      .+.. .+  ...+.
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~-~~--~~~~~   89 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR-DW--KPKPD   89 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh-hC--CCCCC
Confidence            44556667889999999864 77777888775 55 899999999988888775543221      1111 11  11247


Q ss_pred             ccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139          265 VDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       265 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|+|+....     . ...+..+.+.|+|+ |++++.
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            999987543     2 34567888899998 998865

>PRK01581 speE spermidine synthase; Validated

Probab=94.04  E-value=0.96  Score=42.82  Aligned_cols=103  Identities=17%  Similarity=0.078  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC-ce----EeCCCCC---CccHHHHHHhhcCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE----FVNPKDH---DKPIQQVLVDLTDG  263 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~----~i~~~~~---~~~~~~~~~~~~~g  263 (345)
                      .....+|||+|+| .|..+..+++..+.++|++++.+++-.+.++++.. ..    .++..+.   -.+..+.+.. ..+
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~  225 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS  225 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence            3445699999975 46667777776666699999999999998886311 00    0000000   1233344433 334


Q ss_pred             CccEEEEccCC-----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          264 GVDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       264 g~d~v~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .||+||--...           ...+..+.+.|+++ |.++.-..
T Consensus       226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            89988854332           12467778899998 99877643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=94.03  E-value=0.86  Score=41.88  Aligned_cols=106  Identities=16%  Similarity=0.099  Sum_probs=68.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-c--CC--ceEeCCCCCCcc---HHHHHHhhcCC
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F--GV--TEFVNPKDHDKP---IQQVLVDLTDG  263 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~--g~--~~~i~~~~~~~~---~~~~~~~~~~g  263 (345)
                      ..+..|+|+|+ ++.|...+.-+...|+ +|++.--.++..+.++. .  +-  +...|..+ +++   ..+.+++..+.
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE  104 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence            45567999999 9999999999999999 88886666655444432 2  11  11233322 122   23344444445


Q ss_pred             -CccEEEEccCC--------------------------HHHHHHHHHHhccCCeEEEEeccCCC
Q 019139          264 -GVDYSFECIGN--------------------------VSVMRAALECCHKGWGTSVIVGVAAS  300 (345)
Q Consensus       264 -g~d~v~d~~g~--------------------------~~~~~~~~~~l~~~~G~~v~~G~~~~  300 (345)
                       +.-.+++++|-                          -.....++.++++..||+|.+++..+
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G  168 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG  168 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence             78888888872                          12344555667755599999988654

>TIGR00417 speE spermidine synthase

Probab=94.02  E-value=0.53  Score=42.76  Aligned_cols=101  Identities=19%  Similarity=0.116  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~i~~~~~---~~~~~~~~~~~~~gg~d~  267 (345)
                      +..++||++|+|. |..+..+++.....++++++.+++-.+.+++.-..  ..++....   ..+..+.+.. ..+.+|+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv  148 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV  148 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence            3456999998864 44555666665566899999998877777653111  00111000   0223333333 2358998


Q ss_pred             EEEccC----------CHHHHHHHHHHhccCCeEEEEec
Q 019139          268 SFECIG----------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+-...          ....++.+.+.|+++ |.++...
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            874322          123356788899998 9998764

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.01  E-value=0.27  Score=44.43  Aligned_cols=78  Identities=19%  Similarity=0.271  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ +  ++|.+.++.+...|+ +|+.+.+++...+.+++    .+....  .|..+ +++..+.+.+..  .
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence            4678999998 3  799998888888999 78877766321222222    221112  23332 123333333322  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.98  E-value=0.29  Score=43.43  Aligned_cols=77  Identities=25%  Similarity=0.318  Sum_probs=48.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .++||+|+ |.+|...+..+...|+ +|++++++.++.+.+..    .+....   .|..+ .+++.+.+.+..  .+++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence            57999998 9999999988888999 89999888776554432    232211   23332 122322222221  2368


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999887763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.98  E-value=0.43  Score=41.23  Aligned_cols=100  Identities=15%  Similarity=0.143  Sum_probs=58.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHhcCCceEeCCCCCCc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHDK  251 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-------------------~----~~~~~~~g~~~~i~~~~~~~  251 (345)
                      +.+|+|+|+|++|.-.+..+..+|.++++.+|...-                   |    .+.++++..+-.+....  .
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~--~   98 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT--D   98 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--c
Confidence            478999999999999999999999988888875421                   1    12234555543333221  1


Q ss_pred             cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       252 ~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+...++. .++|+|+++.....+...+-+.++...-.++..+.
T Consensus        99 ~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~~  143 (197)
T cd01492          99 DISEKPEEFF-SQFDVVVATELSRAELVKINELCRKLGVKFYATGV  143 (197)
T ss_pred             CccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence            1111111111 36899999988766444444444443133444443

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.31  Score=44.16  Aligned_cols=36  Identities=25%  Similarity=0.357  Sum_probs=30.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++.++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4578999998 9999999998888999 8888877643

>PRK06523 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.21  Score=44.65  Aligned_cols=75  Identities=24%  Similarity=0.202  Sum_probs=46.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+.+++...  . .-.... ..|..+ .+...+.+.+..  .+++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999888999 898888875431  1 101111 123322 122222222221  24789999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      .+.|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9887

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=93.86  E-value=0.64  Score=42.67  Aligned_cols=43  Identities=26%  Similarity=0.336  Sum_probs=36.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~   43 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA   43 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            37788999999988888888898 89999999998888877665

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.86  E-value=0.56  Score=42.82  Aligned_cols=68  Identities=18%  Similarity=0.286  Sum_probs=47.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|.|+|.|.+|...+..++..|. +|+++++++++.+.+++.|....   ..  .+. +.+     ...|+||-|+....
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~--~~~-~~~-----~~aDlVilavp~~~   69 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS--TDL-SLL-----KDCDLVILALPIGL   69 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc--CCH-hHh-----cCCCEEEEcCCHHH
Confidence            58899999999988888888898 89999999998888877764211   11  111 111     25788888777543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.82  E-value=0.49  Score=45.46  Aligned_cols=106  Identities=18%  Similarity=0.267  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-------HHHhc-CCceE-eCCCCCCccHHHHHHh
Q 019139          190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       190 ~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-------~~~~~-g~~~~-i~~~~~~~~~~~~~~~  259 (345)
                      .+...+.+|+|+|+ |.+|...+..+...|+ +|++++++..+.+       ..... +.+.+ .|..+ .+.+.+.+..
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~  132 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS  132 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence            34456779999998 9999999999988999 8999888765321       11112 22222 23322 1222222222


Q ss_pred             hcCCCccEEEEccCCHH------------HHHHHHHHhccC-CeEEEEeccC
Q 019139          260 LTDGGVDYSFECIGNVS------------VMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~~~------------~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      . +.++|+||.|++...            ....+++.++.. .+++|.++..
T Consensus       133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            1 116999999886421            122344444432 2478887753

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.82  E-value=0.38  Score=42.30  Aligned_cols=101  Identities=17%  Similarity=0.160  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeC-------CCCCCcc-HHHHHHhh-
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-------PKDHDKP-IQQVLVDL-  260 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~-------~~~~~~~-~~~~~~~~-  260 (345)
                      ...++.+||+.|+| .|.-++.+|. .|+ +|++++.++...+.+ ++.+......       +....-+ +...+.++ 
T Consensus        34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            44567899999986 4777777765 799 899999999987765 3333221100       0000000 00001111 


Q ss_pred             --cCCCccEEEEccC----C----HHHHHHHHHHhccCCeEEEEe
Q 019139          261 --TDGGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       261 --~~gg~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~  295 (345)
                        ..+.+|.++|..-    .    ...+..+.++|+|+ |+++++
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence              1136899998653    1    23477888899997 875543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.79  E-value=0.34  Score=43.17  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~---~i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +++.+++++++.+.+    +..+.+.   ..|..+ .++..+.+....  .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4689999998 9999999998889999 788887777654433    2233322   123332 122223332221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK07102 short chain dehydrogenase; Provisional

Probab=93.75  E-value=0.54  Score=41.53  Aligned_cols=38  Identities=26%  Similarity=0.358  Sum_probs=32.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR  234 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~  234 (345)
                      .+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~   40 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER   40 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            47899998 9999999999989999 89999888876543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=93.75  E-value=0.18  Score=47.47  Aligned_cols=75  Identities=21%  Similarity=0.187  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcC--Cce---EeCCCCCCccHHHHHHhhcCC-Cc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG--VTE---FVNPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g--~~~---~i~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++..... ..+.++  ...   ..|..+     .+.+.++..+ ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence            3678999998 9999999999999999 8888877655322 111221  111   112222     2233333334 68


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |++|.+.+.
T Consensus        77 d~vih~A~~   85 (349)
T TIGR02622        77 EIVFHLAAQ   85 (349)
T ss_pred             CEEEECCcc
Confidence            999998873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.74  E-value=0.54  Score=48.06  Aligned_cols=95  Identities=15%  Similarity=0.212  Sum_probs=65.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++-...    -.+.+++..-..+|.++-++.+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat----~~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDAT----RMDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCC----CHHHHHhcCCCcCCEEEEEeCC
Confidence            3689999999999999999999999 8999999999999999888653332211    1233333322378999999887


Q ss_pred             HHHHHHH---HHHhccCCeEEEEe
Q 019139          275 VSVMRAA---LECCHKGWGTSVIV  295 (345)
Q Consensus       275 ~~~~~~~---~~~l~~~~G~~v~~  295 (345)
                      +......   .+.+.|+ -+++.-
T Consensus       475 ~~~n~~i~~~ar~~~p~-~~iiaR  497 (621)
T PRK03562        475 PQTSLQLVELVKEHFPH-LQIIAR  497 (621)
T ss_pred             HHHHHHHHHHHHHhCCC-CeEEEE
Confidence            6533333   3334454 455443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.73  E-value=0.48  Score=41.73  Aligned_cols=70  Identities=24%  Similarity=0.335  Sum_probs=49.0

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       198 VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      |+|+|+ |.+|...++.+...+. +|.+..++..  ..+.++..|++.+ ..+-  .+ .+.+.+... ++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~--~~-~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY--DD-PESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T--T--HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc--CC-HHHHHHHHc-CCceEEeecC
Confidence            689998 9999999999999888 8888888764  3556677888644 2221  11 233333322 7999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.72  E-value=0.23  Score=43.88  Aligned_cols=78  Identities=18%  Similarity=0.221  Sum_probs=46.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhH-HHH---HHhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKK-FDR---AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~-~~~---~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.+++|+|+ |++|...++.+...|+ +++.. .+++.+ .+.   ++..+....   .|..+ ..+..+.+.+..  .+
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            578899998 9999999999999999 66664 333322 222   233454432   23322 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.71  E-value=0.37  Score=45.67  Aligned_cols=35  Identities=31%  Similarity=0.341  Sum_probs=31.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +.+|+|+|+|++|..+++.+..+|.++++.++.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            47899999999999999999999998998887654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.70  E-value=0.37  Score=43.30  Aligned_cols=79  Identities=23%  Similarity=0.410  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+    +..+....   .|..+ .....+.+.+..  -+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            4578999998 9999998888888999 788888877664433    23343322   23322 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.66  E-value=0.43  Score=40.36  Aligned_cols=33  Identities=24%  Similarity=0.325  Sum_probs=29.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998888888765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.65  E-value=0.42  Score=43.27  Aligned_cols=105  Identities=19%  Similarity=0.214  Sum_probs=66.9

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +....+++++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... ..+....  .++.+  ..+..+.
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~--~~~~~~~  117 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK--KDFPENT  117 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc--CCCCCCC
Confidence            44667889999999998863 5566677777788 899999999887777653221 1111100  11100  0122247


Q ss_pred             ccEEEEc--c---C---CHHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~--~---g---~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+|+..  .   .   -...++.+.+.|+|+ |++++...
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            9998862  1   1   123567788999998 99998764

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=93.63  E-value=1.3  Score=37.58  Aligned_cols=101  Identities=20%  Similarity=0.204  Sum_probs=63.3

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    .+...+-....   +...    ...
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~----~~~   95 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI----ELP   95 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh----hcC
Confidence            3455667888998888863 6777777776543389999999987776643    33322111111   1111    112


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +.+|+++.....   ...+..+.+.|+++ |++++..
T Consensus        96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            479998854321   23467788899997 9987754

>PLN00203 glutamyl-tRNA reductase

Probab=93.61  E-value=0.37  Score=47.95  Aligned_cols=97  Identities=15%  Similarity=0.215  Sum_probs=60.6

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++...+ ..... .+..+.+     ...|+||.+++
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~-~dl~~al-----~~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL-DEMLACA-----AEADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH-hhHHHHH-----hcCCEEEEccC
Confidence            689999999999999999999999878999999988765554 4532111 11110 1111111     26899999987


Q ss_pred             CHHH--HHHHHHHhcc----CCe--EEEEeccC
Q 019139          274 NVSV--MRAALECCHK----GWG--TSVIVGVA  298 (345)
Q Consensus       274 ~~~~--~~~~~~~l~~----~~G--~~v~~G~~  298 (345)
                      ++..  ....+..+.+    .+.  .++.++.+
T Consensus       339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP  371 (519)
T PLN00203        339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVP  371 (519)
T ss_pred             CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence            6431  2334444322    101  47777764

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.58  E-value=0.33  Score=43.04  Aligned_cols=40  Identities=25%  Similarity=0.253  Sum_probs=34.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                      ..++.+++|+|+ |++|...++.+...|+ +|++++++.++.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~   49 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKL   49 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHH
Confidence            457889999998 9999999988888899 888988887654

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.58  E-value=0.43  Score=42.99  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=47.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +++|+|+ |++|...+..+...|+ +|+.++++.++.+.+    +..+.+..+   |..+ ..++.+.+....  .+++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            6899998 9999999988888999 888888887664432    223333221   2222 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      ++|.+.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=93.57  E-value=0.38  Score=44.62  Aligned_cols=104  Identities=15%  Similarity=0.070  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHH-HhcCCc--eEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~-~~~g~~--~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      ....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ .++...  .+. .    .+..+.+     ..+|+|
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----~~aDiV  192 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----EAVDLV  192 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----hcCCEE
Confidence            456789999999999998888764 6877899999998875543 344211  111 1    1233333     269999


Q ss_pred             EEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh
Q 019139          269 FECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ  310 (345)
Q Consensus       269 ~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~  310 (345)
                      +.++.+...+-..  .++++ -.+..+|.+. ...-++++..
T Consensus       193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~-p~~~El~~~~  230 (304)
T PRK07340        193 VTATTSRTPVYPE--AARAG-RLVVAVGAFT-PDMAELAPRT  230 (304)
T ss_pred             EEccCCCCceeCc--cCCCC-CEEEecCCCC-CCcccCCHHH
Confidence            9988865433222  37897 8999999854 3456677543

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.56  E-value=1.4  Score=36.74  Aligned_cols=86  Identities=22%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+.+|.|+|.|.-|++.++-+|-.|. +|++..+... ..+.+++-|.+.        .+..+.+.     ..|+|+-.+
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv~-----~aDvV~~L~   68 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEV--------MSVAEAVK-----KADVVMLLL   68 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHHH-----C-SEEEE-S
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCee--------ccHHHHHh-----hCCEEEEeC
Confidence            46899999999999999999999999 7776666655 888899988752        24455544     478888777


Q ss_pred             CCHH---HH-HHHHHHhccCCeEEEE
Q 019139          273 GNVS---VM-RAALECCHKGWGTSVI  294 (345)
Q Consensus       273 g~~~---~~-~~~~~~l~~~~G~~v~  294 (345)
                      .+..   .. +.....|+++ -.+++
T Consensus        69 PD~~q~~vy~~~I~p~l~~G-~~L~f   93 (165)
T PF07991_consen   69 PDEVQPEVYEEEIAPNLKPG-ATLVF   93 (165)
T ss_dssp             -HHHHHHHHHHHHHHHS-TT--EEEE
T ss_pred             ChHHHHHHHHHHHHhhCCCC-CEEEe
Confidence            7532   22 4444578885 44443

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PLN02928 oxidoreductase family protein

Probab=93.56  E-value=0.56  Score=44.32  Aligned_cols=34  Identities=21%  Similarity=0.495  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .|.++.|+|.|.+|...++.++.+|+ +|++.+++
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~  191 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRS  191 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCC
Confidence            47899999999999999999999999 99999876

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=93.55  E-value=0.3  Score=37.78  Aligned_cols=96  Identities=26%  Similarity=0.333  Sum_probs=57.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      |.+|+-.|+| .|..++.+++.. ..++++++.++...+.++.    .+.+.-+....  .++.+....+..+.+|+|+-
T Consensus         1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~D~Iv~   76 (117)
T PF13659_consen    1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV--GDARDLPEPLPDGKFDLIVT   76 (117)
T ss_dssp             TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE--SHHHHHHHTCTTT-EEEEEE
T ss_pred             CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE--CchhhchhhccCceeEEEEE
Confidence            4567777664 355555555555 4499999999998887764    23211111111  34443433344458999886


Q ss_pred             ccCC--------------HHHHHHHHHHhccCCeEEEEe
Q 019139          271 CIGN--------------VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       271 ~~g~--------------~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ...-              ...+..+.+.|+++ |.++++
T Consensus        77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            4221              13377888999997 998765

...

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.54  E-value=0.47  Score=45.84  Aligned_cols=74  Identities=24%  Similarity=0.308  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCc-eE--eCCCCCCccHHHHHHhhcCCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~~--i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.. ...+.. ..  .|..+     .+.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-----~~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-----EAALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-----HHHHHHHh-CCCCEE
Confidence            3679999998 9999999998888999 888888877654322 111111 11  22222     12233322 379999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +.+.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            988763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.54  E-value=0.68  Score=40.14  Aligned_cols=34  Identities=38%  Similarity=0.561  Sum_probs=30.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|.|+|++|...++.+.+.|..+++.+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4679999999999999999999999889888877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.51  E-value=0.35  Score=44.96  Aligned_cols=36  Identities=19%  Similarity=0.260  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .+.+|.|+|.|.+|...++.++.+|+ +|++.++..+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57899999999999999999999999 8999876543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.50  E-value=0.33  Score=43.62  Aligned_cols=103  Identities=21%  Similarity=0.280  Sum_probs=59.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC------hhHHHHHHhcCCc-eE--eCCCCCCccHHHHHHhhc
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID------PKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~------~~~~~~~~~~g~~-~~--i~~~~~~~~~~~~~~~~~  261 (345)
                      .+.+++|+|+   +++|...+..+...|+ +|+.+.++      ++..+.+++.+.. ..  .|..+ +++..+.+.+..
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence            4678999996   4899999988888999 77766432      2222233222211 11  23332 122333333322


Q ss_pred             --CCCccEEEEccCCH-------H----------------------HHHHHHHHhccCCeEEEEeccCC
Q 019139          262 --DGGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       262 --~gg~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                        .+++|+++.+.|..       .                      ..+.++..++.+ |+++.+++..
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~  150 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG  150 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence              24799999988731       0                      123455567776 9998887643

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.49  E-value=0.9  Score=42.68  Aligned_cols=36  Identities=33%  Similarity=0.532  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++..
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~  184 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRK  184 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence            57899999999999999999999999 8999887654

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=93.47  E-value=0.8  Score=44.58  Aligned_cols=103  Identities=15%  Similarity=0.163  Sum_probs=61.9

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe-CCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV-NPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i-~~~~~~~~~~~~~~~~~~  262 (345)
                      ....+++|++||=.|+|+ |..++++++.++..+|++++.++++.+.++    .+|.+..+ ....+..... .  ....
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~-~--~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS-Q--WAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-c--cccc
Confidence            445678899998887743 555556666555338999999999877664    45665211 1111000000 0  0112


Q ss_pred             CCccEEE-E--ccCC-------------------------HHHHHHHHHHhccCCeEEEEe
Q 019139          263 GGVDYSF-E--CIGN-------------------------VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       263 gg~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +.+|.|| |  |+|.                         ...+..+++.|++| |+++..
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys  367 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA  367 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            3799887 3  4442                         13567788899998 998854

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK04266 fibrillarin; Provisional

Probab=93.45  E-value=1.4  Score=38.92  Aligned_cols=102  Identities=13%  Similarity=0.177  Sum_probs=60.8

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +...++++++|+=.|+|+ |..+..+++..+...|++++.+++..+.+.+.    ..-..+..+.  .+. .....+ .+
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~--~~~-~~~~~l-~~  140 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA--RKP-ERYAHV-VE  140 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC--CCc-chhhhc-cc
Confidence            457789999999888753 45566667766433899999999766644322    1111221111  110 000111 13


Q ss_pred             CccEEEEccCCHH----HHHHHHHHhccCCeEEEEe
Q 019139          264 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       264 g~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+|+++-....+.    .+..+.+.|+++ |++++.
T Consensus       141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            6999985444332    357778899998 999884

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=93.42  E-value=0.6  Score=43.90  Aligned_cols=99  Identities=18%  Similarity=0.199  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .++.+||=+|+|. |..+..+++..+..++++++.+++-.+.+++.....-+....  .+..+ + .+..+.+|+|+.+-
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e~-l-p~~~~sFDvVIs~~  186 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAED-L-PFPTDYADRYVSAG  186 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHHh-C-CCCCCceeEEEEcC
Confidence            4678899899865 777778888765448999999988777776532111011111  11110 0 12233799888642


Q ss_pred             C-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139          273 G-----N-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       273 g-----~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .     . ...++++.+.|+++ |++++++.
T Consensus       187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1     1 24578889999998 99988764

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.41  E-value=0.53  Score=44.86  Aligned_cols=35  Identities=29%  Similarity=0.389  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            34689999999999999999999999889888765

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.40  E-value=0.31  Score=40.93  Aligned_cols=46  Identities=24%  Similarity=0.268  Sum_probs=39.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      .|..|+++|+ -++|...++.+...|+ +||++.++++.+..+.+.-.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p   52 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP   52 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence            5778999998 6899999999999999 99999999998776654433

>PRK08309 short chain dehydrogenase; Provisional

Probab=93.37  E-value=2.9  Score=35.41  Aligned_cols=143  Identities=17%  Similarity=0.123  Sum_probs=70.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC-ce--E--eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV-TE--F--VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~-~~--~--i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      +++|+|+++++...++.+...|+ +|+++++++++.+.++. ++. ..  .  .|..+ ++++.+.+....  .+++|++
T Consensus         2 ~vlVtGGtG~gg~la~~L~~~G~-~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d-~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGTGMLKRVSLWLCEKGF-HVSVIARREVKLENVKRESTTPESITPLPLDYHD-DDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcCHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCCCeEE
Confidence            57899885555556666667899 88888888776554433 321 11  1  24433 123333333332  2478999


Q ss_pred             EEccCCHHHHHHHHHHhccC------CeEEEEeccCCCCCcee---cChhhhccccEEEEeeecCCc----ccc-cHHHH
Q 019139          269 FECIGNVSVMRAALECCHKG------WGTSVIVGVAASGQEIS---TRPFQLVTGRVWKGTAFGGFK----SRS-QVPWL  334 (345)
Q Consensus       269 ~d~~g~~~~~~~~~~~l~~~------~G~~v~~G~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~----~~~-~~~~~  334 (345)
                      |+.+=... ...+...++..      +--+.++|+........   +-....-+..-+.|+....-.    +.+ -..-+
T Consensus        80 v~~vh~~~-~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv  158 (177)
T PRK08309         80 VAWIHSSA-KDALSVVCRELDGSSETYRLFHVLGSAASDPRIPSEKIGPARCSYRRVILGFVLEDTYSRWLTHEEISDGV  158 (177)
T ss_pred             EEeccccc-hhhHHHHHHHHccCCCCceEEEEeCCcCCchhhhhhhhhhcCCceEEEEEeEEEeCCccccCchHHHHHHH
Confidence            98765422 33333343332      12456667754211111   111111113355676653332    223 33566


Q ss_pred             HHHHhccc
Q 019139          335 VDKYMKKV  342 (345)
Q Consensus       335 ~~~~~~g~  342 (345)
                      ++.++.+.
T Consensus       159 ~~~~~~~~  166 (177)
T PRK08309        159 IKAIESDA  166 (177)
T ss_pred             HHHHhcCC
Confidence            67766543

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=93.35  E-value=1.1  Score=41.27  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=35.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~   46 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA   46 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            68899999999987777778898 89999999888777776664

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.34  E-value=0.49  Score=37.84  Aligned_cols=94  Identities=16%  Similarity=0.284  Sum_probs=55.0

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhH---HHHHHhcCCceEeCCCCCCc-cHH----------------
Q 019139          198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK-PIQ----------------  254 (345)
Q Consensus       198 VlI~Ga-g~vG~~a~q~a~~~G--~~~vi~~~~~~~~---~~~~~~~g~~~~i~~~~~~~-~~~----------------  254 (345)
                      |.|.|+ |.+|..++.+.+...  + +|++......-   .+.++++.+..++..++... .+.                
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            568898 999999999999987  6 67776543332   33446788887776654100 111                


Q ss_pred             HHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139          255 QVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       255 ~~~~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  293 (345)
                      +.+.++.. ..+|+++..+.+...+.-.+..++.+ -++.
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia  118 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA  118 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence            11122222 26777777666555577777777764 4443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.34  E-value=0.6  Score=43.12  Aligned_cols=79  Identities=20%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHhcCCceEe---CCCCCCccHHHHHHhhc-CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~-~g  263 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+..++.. ++.+    .++..|.....   |..+ .+...+.+.... .+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g   88 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG   88 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence            4678999998 9999999988888999 788776542 2222    22333433222   2222 112222221111 25


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        89 ~iD~li~nAG~   99 (306)
T PRK07792         89 GLDIVVNNAGI   99 (306)
T ss_pred             CCCEEEECCCC
Confidence            89999998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.33  E-value=0.4  Score=42.42  Aligned_cols=79  Identities=18%  Similarity=0.238  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHH----HHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~-~~~~~~~~~~----~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      ++.+++|+|+ |++|...+..+...|+ +|+. ..++.++.+.    ++..+....+   |..+ +++....+.+..  .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            3578999998 9999999999999999 6655 4555554332    2233443222   2222 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|++|.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (250)
T PRK08063         81 GRLDVFVNNAAS   92 (250)
T ss_pred             CCCCEEEECCCC
Confidence            478999998873

>PRK06849 hypothetical protein; Provisional

Probab=93.31  E-value=0.71  Score=44.27  Aligned_cols=96  Identities=20%  Similarity=0.154  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC---CCCCCccHHHHHHhhcCC-CccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~---~~~~~~~~~~~~~~~~~g-g~d~v  268 (345)
                      ...+|||+|+ .+.++..+..++..|+ +|++++..+........ .++..+.   ....++.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4578999998 6789999999999999 89999887654332211 2233221   222224466677776655 89999


Q ss_pred             EEccCCHHHHHHHHHHhccCCeEE
Q 019139          269 FECIGNVSVMRAALECCHKGWGTS  292 (345)
Q Consensus       269 ~d~~g~~~~~~~~~~~l~~~~G~~  292 (345)
                      +-+......+......+++. .++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~-~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY-CEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC-cEE
Confidence            98766432233334556554 443

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.31  E-value=0.42  Score=43.53  Aligned_cols=45  Identities=27%  Similarity=0.253  Sum_probs=38.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK  236 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~  236 (345)
                      ...+.+++|+|+|+.+.+++..++.+|+.+|+++.++.++.+.+.
T Consensus       119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la  163 (272)
T PRK12550        119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA  163 (272)
T ss_pred             CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            344568999999999999999999999978999999988766553

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.31  E-value=0.51  Score=42.81  Aligned_cols=78  Identities=22%  Similarity=0.360  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~---~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+   +++|.+.+..+...|+ +|+.+.+++   ++.+.+ ++++....  .|..+ .++..+.+.+..  .
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHhc
Confidence            4678999987   5899999999989999 787776653   222222 34453222  23322 122333333322  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            47899999876

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.30  E-value=0.21  Score=44.84  Aligned_cols=75  Identities=21%  Similarity=0.274  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.   ..... ..|..+ +.++.+.+.+..  .+++|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999998 9999999999999999 88888776654321   11111 123332 122333333222  24789999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      .+.|
T Consensus        83 ~~Ag   86 (266)
T PRK06171         83 NNAG   86 (266)
T ss_pred             ECCc
Confidence            9887

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.27  E-value=0.66  Score=45.83  Aligned_cols=69  Identities=28%  Similarity=0.293  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .+.+|+|+|+|.+|+.++.+++..|+ .|++++.++.     ..+.+++.|.........  .         ....+|+|
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V   82 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV   82 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence            46789999999999999999999999 7998886542     234456677654433221  1         01257888


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +-+.|-
T Consensus        83 v~s~Gi   88 (480)
T PRK01438         83 VTSPGW   88 (480)
T ss_pred             EECCCc
Confidence            877775

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.23  E-value=0.51  Score=41.47  Aligned_cols=79  Identities=23%  Similarity=0.327  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCceEe---CCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+.+++|+|+ |.+|...+..+...|+ +|+++.++.. +.+    .++..+....+   |..+ ...+.+.+.+...  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            3468999998 9999999999999999 6766555443 222    12223332221   3322 1222222222221  


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|.++.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            368999988873

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.23  E-value=0.78  Score=42.04  Aligned_cols=76  Identities=17%  Similarity=0.221  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+|+|+|+|+ +|...++++...|+ +|+.+.+...                     ++.+.+     ..+|+++.+
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A  209 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence            5788999999976 99999999999999 8888755211                     111111     258999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.+..+.  .+.++++ ..++.+|..
T Consensus       210 tG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        210 VGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             cCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            98766333  3568887 888888864

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=93.14  E-value=1.2  Score=39.93  Aligned_cols=104  Identities=16%  Similarity=0.286  Sum_probs=67.3

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc-
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~-  261 (345)
                      ..+.....+||-+|.+ +|..++.+|+.+  +. +++.++.+++..+.++    +.|...-+....  .+..+.+.++. 
T Consensus        74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~  149 (247)
T PLN02589         74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIE  149 (247)
T ss_pred             HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHh
Confidence            3445556788888873 578888888876  34 8999999998777664    456544443332  33445555543 


Q ss_pred             ----CCCccEEEEccC-C--HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 ----DGGVDYSFECIG-N--VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ----~gg~d~v~d~~g-~--~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                          .+.||.||--.. .  ..-++.++++|++| |.++.=..
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNv  191 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCC
Confidence                248998874322 2  23367788999997 88765433

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.14  E-value=0.41  Score=43.90  Aligned_cols=42  Identities=26%  Similarity=0.271  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      .+.+++|+|+|+.+.+++..+..+|+++++++.++.+|.+.+
T Consensus       126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            467899999999999999988899998899999988776555

>TIGR02415 23BDH acetoin reductases

Probab=93.13  E-value=0.5  Score=41.90  Aligned_cols=76  Identities=18%  Similarity=0.240  Sum_probs=47.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +++|+|+ |++|...++.+...|+ +|+.+.+++++.+.+    +..+....   .|..+ +....+.+....  .+++|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            6899998 9999999999889999 888888876654322    23343221   23322 122223333221  13689


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99998873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.12  E-value=1.7  Score=37.64  Aligned_cols=98  Identities=22%  Similarity=0.260  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHh-hcCCCccEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVD-LTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~-~~~gg~d~v  268 (345)
                      ++.+||-+|+|. |..+..+++.....++++++.+++..+.+++    .+...+-...   .+..+.+.. +..+.+|.+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHHcCccccceE
Confidence            567888899864 7777788877644489999999988877753    2332221111   122123322 223478888


Q ss_pred             EEccC--------------CHHHHHHHHHHhccCCeEEEEec
Q 019139          269 FECIG--------------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       269 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +-...              ....++.+.+.|+++ |++++.-
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            75332              134578889999998 9998764

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.12  E-value=0.94  Score=42.35  Aligned_cols=93  Identities=20%  Similarity=0.146  Sum_probs=62.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC-------CCCccHHHHHHhhcCCCccEE
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-------DHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~-------~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      -+|.|+|+|.+|.+.+..+...|. +|+++++++++.+.++..+........       ....+..+.+     ...|+|
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V   78 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA   78 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence            468999999999999998888898 899999988877766654211100000       0001222211     268999


Q ss_pred             EEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          269 FECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       269 ~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +-++.+.. +...++.++++ -.++.+.
T Consensus        79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~  104 (328)
T PRK14618         79 VVAVPSKA-LRETLAGLPRA-LGYVSCA  104 (328)
T ss_pred             EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence            99999876 78888888885 5555553

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.10  E-value=0.71  Score=47.05  Aligned_cols=96  Identities=9%  Similarity=0.062  Sum_probs=67.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+.|+|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...++-..    .-.+.+++..-..+|.++-++++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDa----t~~~~L~~agi~~A~~vv~~~~d  474 (601)
T PRK03659        400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDA----TQLELLRAAGAEKAEAIVITCNE  474 (601)
T ss_pred             cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeC----CCHHHHHhcCCccCCEEEEEeCC
Confidence            3689999999999999999999999 899999999999999988865333211    11233333333378999999888


Q ss_pred             HHHHHHH---HHHhccCCeEEEEec
Q 019139          275 VSVMRAA---LECCHKGWGTSVIVG  296 (345)
Q Consensus       275 ~~~~~~~---~~~l~~~~G~~v~~G  296 (345)
                      +......   .+...|. .+++.-.
T Consensus       475 ~~~n~~i~~~~r~~~p~-~~IiaRa  498 (601)
T PRK03659        475 PEDTMKIVELCQQHFPH-LHILARA  498 (601)
T ss_pred             HHHHHHHHHHHHHHCCC-CeEEEEe
Confidence            6533333   3444564 5666543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.09  E-value=0.53  Score=42.17  Aligned_cols=78  Identities=12%  Similarity=0.194  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH-Hh----cCCce---EeCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KN----FGVTE---FVNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~-~~----~g~~~---~i~~~~~~~~~~~~~~~~~--  261 (345)
                      ++.+++|+|+ +++|...+..+...|+ +|+.+. +++++.+.+ ++    .+...   .+|..+ .++..+.+.+..  
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence            4679999998 9999999999889999 777664 344443322 21    23221   123332 122333333222  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+.+|+++.+.|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            247899998875

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.07  E-value=0.27  Score=45.04  Aligned_cols=75  Identities=13%  Similarity=0.090  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .+.+++|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+ ..++... +....     ..+.+.... ..+|+|++|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence            567899999999999999999999998899999998776554 3333211 11010     001111111 368999999


Q ss_pred             cCC
Q 019139          272 IGN  274 (345)
Q Consensus       272 ~g~  274 (345)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            774

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=92.99  E-value=0.99  Score=40.33  Aligned_cols=99  Identities=18%  Similarity=0.302  Sum_probs=63.2

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCcc
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      +.....++.+||-+|+|. |..+..+++ .|. .+++++.+++..+.+++.... .++.. +    .. .+ .+..+.+|
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-d----~~-~~-~~~~~~fD  105 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-D----IE-SL-PLATATFD  105 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-C----cc-cC-cCCCCcEE
Confidence            334445678899999864 666655554 576 899999999988888765322 11111 1    10 00 12223799


Q ss_pred             EEEEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139          267 YSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       267 ~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+....     . ...+..+.+.|+++ |.+++...
T Consensus       106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            9986543     1 24578888899998 99987643

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=92.97  E-value=0.84  Score=38.83  Aligned_cols=94  Identities=15%  Similarity=0.157  Sum_probs=57.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      +++|+=+|+| .|..++.+++.....+|++++.+++..+.++    +.+.+.+ ....  .+..+ +  ...+.+|+|+-
T Consensus        43 ~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~--~d~~~-~--~~~~~fD~I~s  115 (181)
T TIGR00138        43 GKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVN--GRAED-F--QHEEQFDVITS  115 (181)
T ss_pred             CCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEe--cchhh-c--cccCCccEEEe
Confidence            7888888885 2566666666554348999999987665553    3454322 1111  12211 1  12348998885


Q ss_pred             cc-CC-HHHHHHHHHHhccCCeEEEEec
Q 019139          271 CI-GN-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       271 ~~-g~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .. .. +..++.+.+.|+++ |++++.-
T Consensus       116 ~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  142 (181)
T TIGR00138       116 RALASLNVLLELTLNLLKVG-GYFLAYK  142 (181)
T ss_pred             hhhhCHHHHHHHHHHhcCCC-CEEEEEc
Confidence            43 22 23456777889998 9988763

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK05855 short chain dehydrogenase; Validated

Probab=92.95  E-value=0.43  Score=47.92  Aligned_cols=79  Identities=24%  Similarity=0.323  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+ ++...+.+.+..  .+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            4578999998 9999999988889999 798888887765543    23343221   23332 122223333322  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            79999999874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=92.95  E-value=0.3  Score=44.57  Aligned_cols=96  Identities=14%  Similarity=0.081  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      ..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. +++....+.. +  .+..+.     -..+|+++++
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~~~~-----~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LELQEE-----LADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccchhc-----cccCCEEEEC
Confidence            45678999999999999999999999669999999988765543 3332110111 0  000001     1268999998


Q ss_pred             cCCHHH-----HHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSV-----MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~-----~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +.....     .......++++ ..++.+-.
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            774320     01223566775 67766643

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=92.93  E-value=1.5  Score=38.60  Aligned_cols=99  Identities=22%  Similarity=0.226  Sum_probs=60.9

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .....++.+||-+|+|. |..+..+++ .++ ++++++.++...+.+++    .+....+..    .++.+. .....+.
T Consensus        43 ~~~~~~~~~vLdiG~G~-G~~~~~l~~-~~~-~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~  114 (233)
T PRK05134         43 HAGGLFGKRVLDVGCGG-GILSESMAR-LGA-DVTGIDASEENIEVARLHALESGLKIDYRQ----TTAEEL-AAEHPGQ  114 (233)
T ss_pred             hccCCCCCeEEEeCCCC-CHHHHHHHH-cCC-eEEEEcCCHHHHHHHHHHHHHcCCceEEEe----cCHHHh-hhhcCCC
Confidence            33456788899899864 666777766 477 89999999887766653    232211111    122222 1223358


Q ss_pred             ccEEEE-----ccCCH-HHHHHHHHHhccCCeEEEEec
Q 019139          265 VDYSFE-----CIGNV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d~v~d-----~~g~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+|+-     ..... ..+..+.+.|+++ |++++..
T Consensus       115 fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~g-G~l~v~~  151 (233)
T PRK05134        115 FDVVTCMEMLEHVPDPASFVRACAKLVKPG-GLVFFST  151 (233)
T ss_pred             ccEEEEhhHhhccCCHHHHHHHHHHHcCCC-cEEEEEe
Confidence            999864     33333 3457778889998 9988654

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=92.92  E-value=0.098  Score=28.34  Aligned_cols=22  Identities=27%  Similarity=0.303  Sum_probs=15.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP   32 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~   32 (345)
                      |||+++.++++ ..++++|.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            89999999988 99999999875

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=92.90  E-value=1.6  Score=40.60  Aligned_cols=87  Identities=21%  Similarity=0.227  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.+.+|.|+|.|.+|+..++.++..|. +|++..+.....+.++..|+. +.       ++.+.+.     ..|+|+-++
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llL   79 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLL   79 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeC
Confidence            357899999999999999999999999 888876665555666666763 21       2222222     478888888


Q ss_pred             CCHHH---H-HHHHHHhccCCeEEEE
Q 019139          273 GNVSV---M-RAALECCHKGWGTSVI  294 (345)
Q Consensus       273 g~~~~---~-~~~~~~l~~~~G~~v~  294 (345)
                      ..+.+   + ...+..++++ ..++.
T Consensus        80 Pd~~t~~V~~~eil~~MK~G-aiL~f  104 (335)
T PRK13403         80 PDEQQAHVYKAEVEENLREG-QMLLF  104 (335)
T ss_pred             CChHHHHHHHHHHHhcCCCC-CEEEE
Confidence            75432   2 2345567775 44443

>PLN00016 RNA-binding protein; Provisional

Probab=92.89  E-value=1  Score=42.92  Aligned_cols=95  Identities=14%  Similarity=0.149  Sum_probs=59.4

Q ss_pred             CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-----------HHhcCCceEeCCCCCCccHHHHHH
Q 019139          195 GSIVAVF----GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-----------AKNFGVTEFVNPKDHDKPIQQVLV  258 (345)
Q Consensus       195 g~~VlI~----Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~-----------~~~~g~~~~i~~~~~~~~~~~~~~  258 (345)
                      ..+|||+    |+ |-+|...+..+...|+ .|++++++......           +...+...+.      .+..+ +.
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~------~D~~d-~~  123 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW------GDPAD-VK  123 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE------ecHHH-HH
Confidence            3679999    98 9999999999988998 89998887654221           1122332221      12222 22


Q ss_pred             hhcCC-CccEEEEccCCH-HHHHHHHHHhccC-CeEEEEecc
Q 019139          259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV  297 (345)
Q Consensus       259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~-~G~~v~~G~  297 (345)
                      +.... ++|+|+++.+.. .....+++.++.. -.+++.++.
T Consensus       124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            22233 899999997742 2345566666532 137887764

>PRK09135 pteridine reductase; Provisional

Probab=92.87  E-value=0.65  Score=40.91  Aligned_cols=34  Identities=26%  Similarity=0.242  Sum_probs=29.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.++||+|+ |.+|...+..+...|+ +|+.++++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence            3578999998 9999999988888999 88888775

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.84  E-value=0.55  Score=41.69  Aligned_cols=77  Identities=22%  Similarity=0.275  Sum_probs=46.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HH-H---HHHhcCCce-E--eCCCCCCccHHHHHHhhcC--CC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-D---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG  264 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~-~---~~~~~g~~~-~--i~~~~~~~~~~~~~~~~~~--gg  264 (345)
                      .+++|+|+ |++|...+..+...|+ +|+.++++.. .. +   .++..+... +  .|..+ +.++.+.+.....  ++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence            57899998 9999999998888999 7888776532 21 1   222233321 2  23322 1223333333322  37


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            8999998773

>PRK07411 hypothetical protein; Validated

Probab=92.83  E-value=0.45  Score=45.77  Aligned_cols=34  Identities=29%  Similarity=0.353  Sum_probs=30.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      ..+|+|+|+|++|..+++.+.++|.++++.+|.+
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4689999999999999999999999888888754

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=92.83  E-value=0.7  Score=41.99  Aligned_cols=96  Identities=8%  Similarity=0.018  Sum_probs=56.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcC-CC-ccEEEEcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD-GG-VDYSFECI  272 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~-gg-~d~v~d~~  272 (345)
                      +|+|+|+ |.+|...++.+...|. +|.+.+++.++..   ..+... ..|..+ ++.+.+.+..... .+ +|.+|-+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEEeC
Confidence            4889998 9999999999999998 7999888876532   123222 123332 1223222221111 25 88888766


Q ss_pred             CCH----HHHHHHHHHhccC-CeEEEEecc
Q 019139          273 GNV----SVMRAALECCHKG-WGTSVIVGV  297 (345)
Q Consensus       273 g~~----~~~~~~~~~l~~~-~G~~v~~G~  297 (345)
                      +..    .....+++.++.. -.++|.++.
T Consensus        76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        76 PPIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            531    2234455555443 136777764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=92.80  E-value=0.53  Score=43.06  Aligned_cols=40  Identities=30%  Similarity=0.373  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD  233 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~  233 (345)
                      .++-|+|+|+|++|..++.++.+.|++++..++-.+-.++
T Consensus        73 ~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVDfdqVSls  112 (430)
T KOG2018|consen   73 TNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVDFDQVSLS  112 (430)
T ss_pred             cCcEEEEEecCchhHHHHHHHHHhcCceEEEechhhccHh
Confidence            4578888999999999999999999988888876554443

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=92.79  E-value=1.3  Score=40.77  Aligned_cols=92  Identities=22%  Similarity=0.280  Sum_probs=53.3

Q ss_pred             CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EcCChh--HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       196 ~~VlI~Gag~vG~~-a~q~a~~~G~~~vi~-~~~~~~--~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -+|.|+|.|.+|.. +..+.+.-+. .+.+ ++.+.+  .+..++++|.....      .++.+.+.+.....+|+||++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A   77 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA   77 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence            46899999999987 4444444456 4444 445443  34567778754321      123333322111369999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEec
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ++.....+.+..++..  |..++.-
T Consensus        78 T~a~~H~e~a~~a~ea--Gk~VID~  100 (302)
T PRK08300         78 TSAGAHVRHAAKLREA--GIRAIDL  100 (302)
T ss_pred             CCHHHHHHHHHHHHHc--CCeEEEC
Confidence            9986645555555555  4444443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.79  E-value=0.58  Score=41.17  Aligned_cols=78  Identities=22%  Similarity=0.367  Sum_probs=46.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhcC--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLTD--G  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~~--g  263 (345)
                      +.+++|+|+ |++|...+..+...|+ +++.+ +++.++.+.+.    ..+....   .|..+ +..+.+.+.....  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            468999998 9999998888888899 78777 77766543332    2222221   12222 1222222222211  3


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            79999988774

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=92.78  E-value=1.6  Score=39.92  Aligned_cols=45  Identities=29%  Similarity=0.362  Sum_probs=39.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCce
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE  242 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~~  242 (345)
                      +|.++|.|..|.-.++=+...|+ .+.+.+++.++ .+.++..|+..
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~   47 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATV   47 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcc
Confidence            57788999999999999999999 99999999988 88888878753

>PLN02823 spermine synthase

Probab=92.78  E-value=1.1  Score=41.99  Aligned_cols=99  Identities=18%  Similarity=0.131  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCC---CccHHHHHHhhcCCCccEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~---~~~~~~~~~~~~~gg~d~v  268 (345)
                      ...+|||+|+|. |..+..+++..+.++|++++.+++-.+.+++.-...  .++..+.   ..|-.+.+. ...+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEE
Confidence            446899998753 555667777666678999999999999988753210  1111110   123334443 234589987


Q ss_pred             EEccCC------------HHHHH-HHHHHhccCCeEEEEe
Q 019139          269 FECIGN------------VSVMR-AALECCHKGWGTSVIV  295 (345)
Q Consensus       269 ~d~~g~------------~~~~~-~~~~~l~~~~G~~v~~  295 (345)
                      |--+..            ...++ .+.+.|+++ |.++.-
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q  219 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ  219 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence            743221            12244 677889998 988754

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=92.74  E-value=0.49  Score=43.50  Aligned_cols=84  Identities=18%  Similarity=0.198  Sum_probs=52.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC--CccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|.|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|...  +..+.  .........+.  ..+|++|-++..
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~   76 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA   76 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence            58899999999998888888898 8999988777777776656432  10000  00000001111  478999998886


Q ss_pred             HHHHHHHHHHhc
Q 019139          275 VSVMRAALECCH  286 (345)
Q Consensus       275 ~~~~~~~~~~l~  286 (345)
                      .. +..++..++
T Consensus        77 ~~-~~~~~~~l~   87 (304)
T PRK06522         77 YQ-LPAALPSLA   87 (304)
T ss_pred             cc-HHHHHHHHh
Confidence            54 455555444

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=92.73  E-value=0.69  Score=38.30  Aligned_cols=84  Identities=18%  Similarity=0.185  Sum_probs=54.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE------eCCC-CCCccHHHHHHhhcCCCccEEE
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF------VNPK-DHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~------i~~~-~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      +|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+....      +... ....++.+.+     .+.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence            57899999999999999999998 99999999988777765332100      0000 0012333333     2589999


Q ss_pred             EccCCHHHHHHHHHHhcc
Q 019139          270 ECIGNVSVMRAALECCHK  287 (345)
Q Consensus       270 d~~g~~~~~~~~~~~l~~  287 (345)
                      -++.+.. .+..++.+++
T Consensus        75 iavPs~~-~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPSQA-HREVLEQLAP   91 (157)
T ss_dssp             E-S-GGG-HHHHHHHHTT
T ss_pred             ecccHHH-HHHHHHHHhh
Confidence            8888755 6666666655

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07775 short chain dehydrogenase; Provisional

Probab=92.73  E-value=0.68  Score=41.86  Aligned_cols=78  Identities=18%  Similarity=0.161  Sum_probs=48.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      ..+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+    +..+....   .|..+ .+.+.+.+.+..  -++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            458999998 9999999998888999 888887776654332    22343322   13322 122222222221  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=92.70  E-value=1  Score=43.94  Aligned_cols=80  Identities=19%  Similarity=0.162  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      ....+++|.|.|.+|...++.+...|. ++++++.++++.+.+++.+.+ .++.- +  ..-.+.+.+..-..+|.++-+
T Consensus       229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~g-d--~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHG-D--GTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEEC-C--CCCHHHHHhcCCccCCEEEEC
Confidence            346889999999999999999999999 899999999988877664322 22222 2  111234444433478999887


Q ss_pred             cCCHH
Q 019139          272 IGNVS  276 (345)
Q Consensus       272 ~g~~~  276 (345)
                      +++..
T Consensus       305 ~~~~~  309 (453)
T PRK09496        305 TNDDE  309 (453)
T ss_pred             CCCcH
Confidence            77543

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=92.69  E-value=0.73  Score=40.47  Aligned_cols=104  Identities=22%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCc----eEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ......++.+|+-+|+|. |..+..+++..+ ..++++++.++...+.+++.-..    ..+....  .++.+.  ....
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~--~~~~  119 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL--PFPD  119 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC--CCCC
Confidence            344456778999999976 788888888775 23899999999887777653211    1111100  111110  0122


Q ss_pred             CCccEEEEccC------CHHHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +.+|+|+....      ....+..+.+.|+++ |+++++..
T Consensus       120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~  159 (239)
T PRK00216        120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF  159 (239)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence            47898874322      234467888899998 99988765

>PLN02256 arogenate dehydrogenase

Probab=92.59  E-value=1.1  Score=41.41  Aligned_cols=53  Identities=19%  Similarity=0.248  Sum_probs=39.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|+
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv   79 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGV   79 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCC
Confidence            3344443456789999999999998888888887 8888888764 355556665

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=92.52  E-value=0.51  Score=43.72  Aligned_cols=94  Identities=15%  Similarity=0.109  Sum_probs=54.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCceEeCCCCCCccHHH-HHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~-~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|+|+|+|++|.+.+-.+...|. +|+.+.+..++.+..++- |.. +...... ..+.- .......+.+|++|-|+=+
T Consensus         4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK~   80 (305)
T PRK05708          4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYAIPAETADAAEPIHRLLLACKA   80 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeeccCCCCcccccccCEEEEECCH
Confidence            68999999999987777777888 888888887777666543 432 2111110 00000 0000011378999988776


Q ss_pred             HHHHHHHH----HHhccCCeEEEEe
Q 019139          275 VSVMRAAL----ECCHKGWGTSVIV  295 (345)
Q Consensus       275 ~~~~~~~~----~~l~~~~G~~v~~  295 (345)
                      .+ ...++    ..+.++ ..++.+
T Consensus        81 ~~-~~~al~~l~~~l~~~-t~vv~l  103 (305)
T PRK05708         81 YD-AEPAVASLAHRLAPG-AELLLL  103 (305)
T ss_pred             Hh-HHHHHHHHHhhCCCC-CEEEEE
Confidence            54 33334    344555 555555

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=92.52  E-value=1.4  Score=40.88  Aligned_cols=57  Identities=18%  Similarity=0.183  Sum_probs=46.9

Q ss_pred             hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHhcCCceEeC
Q 019139          188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~---~~~~~~~~~~~g~~~~i~  245 (345)
                      ..+.+.||.++||=.. |..|...+-++...|+ +++.+..   +.+|+..++.+|++.+..
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            5577999999999887 8999999999999999 6666644   457888899999976653

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=92.51  E-value=0.85  Score=41.69  Aligned_cols=46  Identities=33%  Similarity=0.478  Sum_probs=36.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhHHHHHHhcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~-vi~~~~~~~~~~~~~~~g~  240 (345)
                      ..+|+|.|.|.+|.+.+..++..|... |+..+.+.++.+.+.++|.
T Consensus         3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv   49 (279)
T COG0287           3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGV   49 (279)
T ss_pred             CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCc
Confidence            357888999999999999999999833 4666777766666666665

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=92.50  E-value=0.69  Score=42.93  Aligned_cols=77  Identities=21%  Similarity=0.218  Sum_probs=48.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH-HhcCC---c-eE--eCCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EF--VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~-~~~g~---~-~~--i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.+++|+|+ +++|...+..+...| + +|+.+.+++++.+.+ +++..   . ..  .|..+ ..+....+.++.  .+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            468999998 999999888888889 7 888888877765433 33321   1 11  23332 122222333321  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        81 ~iD~lI~nAG   90 (314)
T TIGR01289        81 PLDALVCNAA   90 (314)
T ss_pred             CCCEEEECCC
Confidence            7999999877

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=92.49  E-value=0.78  Score=42.52  Aligned_cols=37  Identities=22%  Similarity=0.173  Sum_probs=30.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      .+.+|+|+|+ |.+|...+..+...|+ +|+++.++..+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   41 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD   41 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            4679999998 9999999998888999 78877666543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=92.44  E-value=0.73  Score=40.41  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=45.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHh---cCCce-E--eCCCCCCccHHHHHHhhc--CCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR-AKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~-~~~---~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .++||+|+ |++|...+..+...|+ +++++.+ ++++.+. ..+   .+... .  .|..+ +.++.+.+.+..  .++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            36899998 9999999999999999 7777766 4433322 222   22211 1  22222 122223332221  247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            8999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.44  E-value=0.59  Score=41.87  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHH-HHHhcCCce---EeCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVTE---FVNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~-~~~~~g~~~---~i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.++++.  +..+ ..++++...   ..|..+ .++..+.+.+..  .
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            4678999985   6999999988888999 888876543  3323 233343211   123322 122333333222  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            479999998763

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=92.44  E-value=1.2  Score=35.24  Aligned_cols=92  Identities=25%  Similarity=0.380  Sum_probs=50.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChh---HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPK---KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~---~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +|.|+|+ |-+|...++.+.. .+.+-+-+++++..   ..+...-.|....      .....+.+.++.. .+|+++|+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~------~~~v~~~l~~~~~-~~DVvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPL------GVPVTDDLEELLE-EADVVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-------SSBEBS-HHHHTT-H-SEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCc------ccccchhHHHhcc-cCCEEEEc
Confidence            5889999 9999999999998 57744444555541   1111111111100      0000111222222 38999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      + .+......++.+... |.-+++|.
T Consensus        75 T-~p~~~~~~~~~~~~~-g~~~ViGT   98 (124)
T PF01113_consen   75 T-NPDAVYDNLEYALKH-GVPLVIGT   98 (124)
T ss_dssp             S--HHHHHHHHHHHHHH-T-EEEEE-
T ss_pred             C-ChHHhHHHHHHHHhC-CCCEEEEC
Confidence            8 555566666666664 77777886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07578 short chain dehydrogenase; Provisional

Probab=92.43  E-value=2.2  Score=36.35  Aligned_cols=87  Identities=22%  Similarity=0.290  Sum_probs=52.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +++|+|+ |++|...+..+... + +|+.++++..          ...+|..+ .++..+.+..+  +++|+++.+.|..
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~~   66 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD-PASIRALFEKV--GKVDAVVSAAGKV   66 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC-hHHHHHHHHhc--CCCCEEEECCCCC
Confidence            5899988 99999877766666 6 8888877643          12234333 12222222222  4788888887731


Q ss_pred             -------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          276 -------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       276 -------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                                               ...+.+.+.++++ |+++.++...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~~  114 (199)
T PRK07578         67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGIL  114 (199)
T ss_pred             CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcccc
Confidence                                     1123333445676 8898887543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=92.40  E-value=0.77  Score=41.04  Aligned_cols=79  Identities=16%  Similarity=0.127  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHhcCCce---EeCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE---FVNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~----~~~~~g~~~---~i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +++.+.++. +..+    .++..+...   ..|..+ .....+.+....  .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            4679999998 9999999999999999 676665533 3222    122233321   123333 122222222221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            478999998874

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=92.40  E-value=0.65  Score=39.36  Aligned_cols=78  Identities=19%  Similarity=0.221  Sum_probs=44.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHHhcCCceEeCCCC--CCccHHHHHHhhcC--CC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFVNPKD--HDKPIQQVLVDLTD--GG  264 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-------~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~--gg  264 (345)
                      ++||+|+ |++|...++.+...|..+++.+.++.       +..+.+++.|....+..-+  +.+.+.+.+..+..  ++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            6889987 99999999999988887999988882       2344555666643322211  11233333333332  36


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      ++.||-+.|.
T Consensus        82 i~gVih~ag~   91 (181)
T PF08659_consen   82 IDGVIHAAGV   91 (181)
T ss_dssp             EEEEEE----
T ss_pred             cceeeeeeee
Confidence            7888888774

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=92.35  E-value=0.58  Score=48.38  Aligned_cols=79  Identities=24%  Similarity=0.390  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h----cCCce----EeCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~----~g~~~----~i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +    .+...    ..|..+ ..++.+.+.+..  
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            3678999998 9999999998888999 8999888876654332 2    23211    123322 122323333221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.+.|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            2479999999883

>PRK08223 hypothetical protein; Validated

Probab=92.35  E-value=0.43  Score=43.68  Aligned_cols=35  Identities=31%  Similarity=0.285  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.+|+|+|+|++|..+++.+.++|..++..+|.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            34789999999999999999999999888888754

>PRK13984 putative oxidoreductase; Provisional

Probab=92.29  E-value=0.82  Score=46.61  Aligned_cols=77  Identities=25%  Similarity=0.249  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHhcCCceEeCCCCC-
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDH-  249 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~---------------------~~~~~~~~~g~~~~i~~~~~-  249 (345)
                      .+.+++|+|+|+|+.|+.++..++..|. +|+++++.+                     ...+.++++|.+..++..-. 
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            4578899999999999999999999999 888886543                     12455677887655543211 


Q ss_pred             CccHHHHHHhhcCCCccEEEEccCC
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +... +.+.    ..+|.+|-++|+
T Consensus       359 ~~~~-~~~~----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPL-EELR----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCH-HHHH----hcCCEEEEEcCc
Confidence            1111 1221    269999998885

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=92.29  E-value=2.9  Score=31.04  Aligned_cols=76  Identities=22%  Similarity=0.328  Sum_probs=50.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCChhHHHHH-HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAG---ASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G---~~~vi~~-~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +|.++|+|.+|.+.+.-....|   . +|+.+ ++++++.+.+ ++++.... .     .+..+.+.     ..|++|-+
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~-~-----~~~~~~~~-----~advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQAT-A-----DDNEEAAQ-----EADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEE-S-----EEHHHHHH-----HTSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccc-c-----CChHHhhc-----cCCEEEEE
Confidence            5778899999999999988888   6 77744 8888887766 55664322 1     12233333     37999999


Q ss_pred             cCCHHHHHHHHHHh
Q 019139          272 IGNVSVMRAALECC  285 (345)
Q Consensus       272 ~g~~~~~~~~~~~l  285 (345)
                      +-... +...++.+
T Consensus        69 v~p~~-~~~v~~~i   81 (96)
T PF03807_consen   69 VKPQQ-LPEVLSEI   81 (96)
T ss_dssp             S-GGG-HHHHHHHH
T ss_pred             ECHHH-HHHHHHHH
Confidence            88755 55555444

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=92.26  E-value=0.8  Score=40.29  Aligned_cols=104  Identities=20%  Similarity=0.288  Sum_probs=64.1

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      .....++++++||=+|+| .|..+..+++..+. .++++++.+++..+.+++    .+.+.+-...   .+..+ + .+.
T Consensus        38 l~~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~-~-~~~  111 (231)
T TIGR02752        38 MKRMNVQAGTSALDVCCG-TADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVH---GNAME-L-PFD  111 (231)
T ss_pred             HHhcCCCCCCEEEEeCCC-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEE---echhc-C-CCC
Confidence            345667889999999986 36677778877642 289999999887776653    2222111000   01100 0 122


Q ss_pred             CCCccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+-...     . ...+..+.+.|+++ |++++.-.
T Consensus       112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence            347898875322     1 23467788899997 99987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.25  E-value=0.82  Score=41.08  Aligned_cols=78  Identities=21%  Similarity=0.375  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~---~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+.+++|+|+   +++|.+.++.+...|+ +|+.+.+.   +++.+.+ ++++....  .|..+ +++..+.+.....  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence            4678999984   5899999988888999 77776433   2333322 33443222  23332 2233333333322  


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        83 g~iD~lvnnAG   93 (260)
T PRK06997         83 DGLDGLVHSIG   93 (260)
T ss_pred             CCCcEEEEccc
Confidence            47999999876

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=92.19  E-value=1.4  Score=40.42  Aligned_cols=88  Identities=23%  Similarity=0.369  Sum_probs=54.0

Q ss_pred             EEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhH--HHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          197 IVAVFGLGTVGLAV-AEGAKAAGASRVIG-IDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       197 ~VlI~Gag~vG~~a-~q~a~~~G~~~vi~-~~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +|.|+|+|.+|... ..+.+..+. .+.+ ++.+.++  ++.++++|......      ++...+.   ...+|+||+++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT   72 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT   72 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence            57899999999864 555555566 5554 4444443  45677888654331      1222221   13799999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEec
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +...-.+.+..++..|  .-+++-
T Consensus        73 p~~~H~e~a~~al~aG--k~VIde   94 (285)
T TIGR03215        73 SAKAHARHARLLAELG--KIVIDL   94 (285)
T ss_pred             CcHHHHHHHHHHHHcC--CEEEEC
Confidence            9876566666666664  444443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=92.16  E-value=0.61  Score=44.89  Aligned_cols=34  Identities=26%  Similarity=0.292  Sum_probs=30.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +.+|+|+|+|++|..++..+.++|..+++.+|.+
T Consensus        42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4689999999999999999999999888888743

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=92.15  E-value=0.9  Score=43.34  Aligned_cols=79  Identities=24%  Similarity=0.262  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCCh---h-------------HHHHHHhcCCceE-e--CCCCCC
Q 019139          193 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDP---K-------------KFDRAKNFGVTEF-V--NPKDHD  250 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~--a~q~a~~~G~~~vi~~~~~~---~-------------~~~~~~~~g~~~~-i--~~~~~~  250 (345)
                      ..+.++||+|+ +++|++  .++.+ ..|+ +++++....   +             -.+.+++.|.... +  |..+ +
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-D  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-H
Confidence            44678899998 899999  45555 8899 777776322   1             1234455665422 2  2222 1


Q ss_pred             ccHH---HHHHhhcCCCccEEEEccCCH
Q 019139          251 KPIQ---QVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       251 ~~~~---~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +...   +.+.+.. |++|+++.+++.+
T Consensus       116 E~v~~lie~I~e~~-G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQDL-GQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHhc-CCCCEEEECCccC
Confidence            2222   2222222 5799999998875

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

Probab=92.15  E-value=1.4  Score=32.13  Aligned_cols=92  Identities=22%  Similarity=0.238  Sum_probs=52.7

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ++-+|+|. |....++++ ....++++++.+++..+.+++   ......+....  .++.+... ...+++|+++....-
T Consensus         2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~i~~~~~~   76 (107)
T cd02440           2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK--GDAEELPP-EADESFDVIISDPPL   76 (107)
T ss_pred             eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE--cChhhhcc-ccCCceEEEEEccce
Confidence            45567754 667777777 344499999999888776652   11111111111  12222211 123479988875442


Q ss_pred             -------HHHHHHHHHHhccCCeEEEEe
Q 019139          275 -------VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       275 -------~~~~~~~~~~l~~~~G~~v~~  295 (345)
                             ...+..+.+.++++ |.+++.
T Consensus        77 ~~~~~~~~~~l~~~~~~l~~~-g~~~~~  103 (107)
T cd02440          77 HHLVEDLARFLEEARRLLKPG-GVLVLT  103 (107)
T ss_pred             eehhhHHHHHHHHHHHHcCCC-CEEEEE
Confidence                   34456777788997 988764

There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=92.11  E-value=0.87  Score=40.21  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=46.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHH----HHhcCCceE-e--CCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~----~~~~g~~~~-i--~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++. +++++.+.    ++..+.+.. +  |..+ .+.+.+.+.+...  
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            3679999998 9999999998888999 676543 33333322    223333222 1  2222 1222223332221  


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +.+|+++.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>PRK14968 putative methyltransferase; Provisional

Probab=92.08  E-value=0.61  Score=39.36  Aligned_cols=42  Identities=36%  Similarity=0.586  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK  236 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~  236 (345)
                      ..+++++|-.|+| .|..+..+++. +. ++++++.+++..+.++
T Consensus        21 ~~~~~~vLd~G~G-~G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~   62 (188)
T PRK14968         21 DKKGDRVLEVGTG-SGIVAIVAAKN-GK-KVVGVDINPYAVECAK   62 (188)
T ss_pred             ccCCCEEEEEccc-cCHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence            3678889999875 35667777776 66 8999999988776663

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.02  E-value=1.8  Score=40.65  Aligned_cols=37  Identities=32%  Similarity=0.441  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~  181 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK  181 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence            56789999999999999999999999 89999877643

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.00  E-value=1.5  Score=40.37  Aligned_cols=82  Identities=21%  Similarity=0.212  Sum_probs=59.7

Q ss_pred             HHhhcCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          186 VWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       186 l~~~~~~-~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +.+...+ -.|.+|+|+|- +.+|.-.+.++...|+ .|+++. ++.                      ++.+.+     
T Consensus       148 ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~----------------------~l~e~~-----  199 (296)
T PRK14188        148 LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR----------------------DLPAVC-----  199 (296)
T ss_pred             HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC----------------------CHHHHH-----
Confidence            3344444 47899999995 9999999999999999 888873 322                      111111     


Q ss_pred             CCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ...|+++-++|.+..+...+  +++| ..++.+|..
T Consensus       200 ~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        200 RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence            14899999999987666554  8897 899999974

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=91.96  E-value=1.2  Score=38.79  Aligned_cols=98  Identities=16%  Similarity=0.127  Sum_probs=69.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-C
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G  264 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g  264 (345)
                      |.....+.+-..|+=+|+|+ |..+-.++++.....|.+++++.+=++.++....+.-+...        .++..... .
T Consensus        22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~a--------Dl~~w~p~~~   92 (257)
T COG4106          22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEEA--------DLRTWKPEQP   92 (257)
T ss_pred             HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceecc--------cHhhcCCCCc
Confidence            33445556667777789985 89999999998755999999999988888776655333221        23344444 6


Q ss_pred             ccEEEEccC------CHHHHHHHHHHhccCCeEEE
Q 019139          265 VDYSFECIG------NVSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       265 ~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v  293 (345)
                      .|++|...-      .+..+..++..|+|| |.+.
T Consensus        93 ~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA  126 (257)
T COG4106          93 TDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA  126 (257)
T ss_pred             cchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence            787775533      356789999999997 8764

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=91.94  E-value=1.7  Score=40.69  Aligned_cols=36  Identities=36%  Similarity=0.610  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|.++.|+|.|.||.+.++.++..|+ +|+..+++..
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~  180 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN  180 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence            47899999999999999999999999 8999887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	345
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		0.0
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		0.0
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		1e-126
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		1e-126
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-126
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-125
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-109
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-104
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-101
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-100
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-100
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-100
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		5e-99
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-98
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		3e-98
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		4e-98
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		4e-98
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		5e-98
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		5e-98
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-98
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		6e-98
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		6e-98
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		7e-98
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		7e-98
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-97
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-97
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-92
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-92
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		6e-92
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		7e-91
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		9e-91
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-35
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-18
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-18
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-18
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		8e-18
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		4e-17
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-17
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		2e-16
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		7e-16
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-15
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		2e-15
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		1e-14
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		8e-14
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		9e-14
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		2e-13
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		5e-13
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		5e-13
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		8e-13
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		1e-12
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-12
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		4e-12
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		9e-12
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-11
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		3e-11
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-11
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		5e-11
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		2e-10
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		3e-10
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		6e-10
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		6e-10
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		5e-09
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		8e-09
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		3e-08
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		4e-08
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		5e-08
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		6e-08
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		1e-07
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-07
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-07
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-07
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		3e-07
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		4e-07
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		7e-07
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		1e-06
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		6e-06
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		2e-05
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		5e-05
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		5e-05
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		1e-04
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-04
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-04
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		5e-04
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		7e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/340 (90%), Positives = 322/340 (94%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPEG
Sbjct: 19  ATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEG 78
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPC+LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 79  LFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 138
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPT
Sbjct: 139 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPT 198
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVEPGSIVAVFGLGTV             SR+IGIDID KKFDRAKNFGVT
Sbjct: 199 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVT 258
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVIVGVAASG
Sbjct: 259 EFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASG 318
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSRSQVP LVDKY+KK
Sbjct: 319 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKK 358

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  633 bits (1633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/340 (89%), Positives = 317/340 (93%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPEG
Sbjct: 1   ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 61  LFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATG 120
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G+MMNDRKSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVPT
Sbjct: 121 VGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           GLGAVWNTAKVEPGS VA+FGLGTV             SR+IGIDID KK++ AK FGV 
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG
Sbjct: 241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 300
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           QEISTRPFQLVTGRVWKGTAFGGFKSR+QVPWLV+KYM K
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK 340

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  446 bits (1147), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 265/336 (78%), Gaps = 1/336 (0%)
Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
           M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
             NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +N
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302
Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  446 bits (1147), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 265/336 (78%), Gaps = 1/336 (0%)
Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct: 63  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 121
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
           M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
             NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +N
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct: 242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 301
Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 302 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  446 bits (1147), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 265/336 (78%), Gaps = 1/336 (0%)
Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
           M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
             NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +N
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302
Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  443 bits (1139), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/336 (68%), Positives = 264/336 (78%), Gaps = 1/336 (0%)
Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ILGH  AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 121
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
           M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
             NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +N
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           P+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI+
Sbjct: 242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 301
Query: 306 TRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 302 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/346 (57%), Positives = 250/346 (72%), Gaps = 7/346 (2%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPE 60
           +T G+VI CKAAVAWE NKPLVIE+++V  P A E+RIKI+ T +CHTD Y  + GK  +
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG-A 119
           G FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C  V+G A
Sbjct: 61  G-FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQC--VKGWA 117
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
             +  +M+ +++RF+  G+ +  F+GTSTFSQYTVV+ ++VAKIDP APLD VCLLGCGV
Sbjct: 118 NESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGV 177
Query: 180 PTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFG 239
            TG GA  NTAKVEPGS  AVFGLG V              R+I +D++P KF++AK FG
Sbjct: 178 STGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237
Query: 240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
            T+FVNP DH +PI QVL  +T+GGVD+S EC+GNV VMR ALE C KGWG SV+VG   
Sbjct: 238 ATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVG-WT 296
Query: 300 SGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
              +++TRP QL+ GR WKG+ FGGFK +  VP +V  Y+ KKV L
Sbjct: 297 DLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKL 342

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  373 bits (957), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/348 (54%), Positives = 237/348 (68%), Gaps = 4/348 (1%)
Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M T+G+VI CKAA+AWE  KPL IE+V+VAPP+A EVRI+I+ T+LCHTDA     K   
Sbjct: 2   MGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG 61
Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV---R 117
             FP I+GHEAAGIVES+G GVT V+PGD VIP Y   CR+CKFC S  TNLCGK+   +
Sbjct: 62  LAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLK 121
Query: 118 GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177
                  +M D+ SRF+  GKP+YHF GTSTFSQYTVV D+++AKID  A L++VCLLGC
Sbjct: 122 SPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGC 181
Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKN 237
           G  TG GA  N AKV PGS  AVFGLG V             SR+IGIDI+ +KF +AK 
Sbjct: 182 GFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKA 241
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            G T+ +NP+D  KPIQ+V+++LT GGVD++ +C G    M+AAL+C   GWG+   +GV
Sbjct: 242 LGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 301
Query: 298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYM-KKVNL 344
           AA  + ++  P +L+ GR   GT FGG+KS   +P LV  Y  KK NL
Sbjct: 302 AAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNL 349

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/340 (54%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IEDV+VAPP+A EVRIK++   +CHTD +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K      
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV  + 
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG  +GGFKS+  +P LV  +M K
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/340 (54%), Positives = 231/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IEDV+VAPP+A EVRIK++   +C TD +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K      
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV  + 
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG  +GGFKS+  +P LV  +M K
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/340 (54%), Positives = 231/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IEDV+VAPP+A EVRIK++   +C TD +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K      
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV  + 
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG  +GGFKS+  +P LV  +M K
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/340 (54%), Positives = 231/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IEDV+VAPP+A EVRIK++   +C TD +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K      
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D   RF+  GKPI+HF+GTSTFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV  + 
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG  +GGFKS+  +P LV  +M K
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  357 bits (916), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 182/340 (53%), Positives = 229/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++   +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP +  +C +C+ CK+ ++N C K      
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D   RF+ +GKPI+HF+G STFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTL-QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV    
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAK 338

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 181/340 (53%), Positives = 228/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  354 bits (909), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 181/340 (53%), Positives = 228/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAK 338

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  354 bits (908), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVI GV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  354 bits (908), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIV V    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  354 bits (908), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG               +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  353 bits (907), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 181/340 (53%), Positives = 228/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  353 bits (907), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 228/340 (67%), Gaps = 3/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++   +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C  CK  + NLC  ++  + 
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSM 117
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
               M D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 118 PRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFST 177
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 178 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 237
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M AAL CC + +G SVIVGV    
Sbjct: 238 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDS 297
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 298 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  353 bits (907), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVI GV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  353 bits (907), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 181/340 (53%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP    +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 183/340 (53%), Positives = 228/340 (67%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++   +C TD +  SG     
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P ILGHEAAGIVESVGEGVT V+PGD VIP    +C +C+ CK+ ++N C K   +  
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G +  D  SRF+   KPI+HF+G STFSQYTVV + +VAKID  +PL+KVCL+GCG  T
Sbjct: 120 QGTL-QDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVIVGV    
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L+TGR WKG   GGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAK 338

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D    SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG V             +R+IG+DI+  +F +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 180/340 (52%), Positives = 227/340 (66%), Gaps = 2/340 (0%)
Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           L P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG               +R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  352 bits (902), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 179/339 (52%), Positives = 227/339 (66%), Gaps = 3/339 (0%)
Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++   +C +D +  SG     L
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL 61
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
            P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C  CK  + NLC  ++  +  
Sbjct: 62  -PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMP 118
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
              M D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  TG
Sbjct: 119 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
            G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G TE
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M AAL CC + +G SVIVGV    Q
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 173/339 (51%), Positives = 221/339 (65%), Gaps = 3/339 (0%)
Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T G+VI CKAAV WE  +P  IE+++VAPP+  EVRIKIL T +C TD +   G      
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK- 60
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FP I+GHEA GIVES+GEGVT V+PGD VIP +  +CREC  C++   NLC +    TG 
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR-SDITGR 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           GV+  D  +RF+  GKP++HFM TSTF++YTVV + SVAKID  AP +KVCL+GCG  TG
Sbjct: 120 GVLA-DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
            GA   T KV+PGS   VFGLG V             SR+IGID++  KF++A   G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            ++PKD  KPI +VL ++T   V Y+FE IG++  M  AL  CH  +GTSV+VGV  S +
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            ++  P  L TGR WKG  FGG KSR  VP LV +++ K
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  334 bits (857), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 172/339 (50%), Positives = 221/339 (65%), Gaps = 3/339 (0%)
Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T G+VI CKAAV WE  +P  IE+++VAPP+  EVRIKIL T +C TD +   G      
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSK- 60
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FP I+GHEA GIVES+GEGVT V+PGD VIP +  +CREC  C++   NLC +    TG 
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIR-SDITGR 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
           GV+  D  +RF+  GKP++HF+ TSTF++YTVV + SVAKID  AP +KVCL+GCG  TG
Sbjct: 120 GVLA-DGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
            GA   T KV+PGS   VFGLG V             SR+IGID++  KF++A   G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            ++PKD  KPI +VL ++T   V Y+FE IG++  M  AL  CH  +GTSV+VGV  S +
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            ++  P  L TGR WKG  FGG KSR  VP LV +++ K
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  333 bits (855), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 168/344 (48%), Positives = 227/344 (65%), Gaps = 10/344 (2%)
Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-- 60
           T+G+VI CKAA+AW+   PL IE+++V+PP+A EVRI+++ T +CHTD    +  DP+  
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDI---NATDPKKK 58
Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
            LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R   
Sbjct: 59  ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFK 118
Query: 121 GAGV---MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177
              +   +M DR SRF+  G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GC
Sbjct: 119 YPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178
Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKN 237
           G  +G GA  NTAKV PGS  AVFGLG V             SR+I IDI+ +KF +AK 
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    ++AA++C   GWG+  +VG 
Sbjct: 239 LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG- 297
Query: 298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            A   E++     ++ GR   GT FGG+KS   VP LV  Y  K
Sbjct: 298 -AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  330 bits (846), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 175/341 (51%), Positives = 224/341 (65%), Gaps = 4/341 (1%)
Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M T G+ ITCKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+       P 
Sbjct: 1   MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60
Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
             FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K     
Sbjct: 61  K-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 119
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
             G +M D  SRF+  GKPIY+ MGTSTF++YTVV D++VAKIDP+APL+  CL+GCG  
Sbjct: 120 KTG-LMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFA 177
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
           TG GA  NTAKV PGS  AVFGLG V             SR+IG+     KF +A   G 
Sbjct: 178 TGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TE +NPKD+DKPI +V+ + T+GGVDY+ EC G +  M  AL+  + G G +V++G+A+ 
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297
Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            + +   P  L+TGR  KG+ FGGFK   +V  LVD YMKK
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  330 bits (845), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 167/344 (48%), Positives = 226/344 (65%), Gaps = 10/344 (2%)
Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-- 60
           T+G+VI CKAA+AW+   PL IE+++V+PP+A EVRI+++ T +C TD    +  DP+  
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDI---NATDPKKK 58
Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
            LFP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R   
Sbjct: 59  ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFK 118
Query: 121 GAGV---MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177
              +   +M DR SRF+  G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GC
Sbjct: 119 YPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178
Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKN 237
           G  +G GA  NTAKV PGS  AVFGLG V             SR+I IDI+ +KF +AK 
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    ++AA++C   GWG+  +VG 
Sbjct: 239 LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG- 297
Query: 298 AASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            A   E++     ++ GR   GT FGG+KS   VP LV  Y  K
Sbjct: 298 -AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  144 bits (363), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 19/325 (5%)
Query: 24  IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 83
           ++ +++  PQ  EV +K++ T +CHTD      K P  L P +LGHE +GI+E++G  VT
Sbjct: 21  LQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEGSGIIEAIGPNVT 79
Query: 84  EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI----NGKP 139
           E+Q GDHV+  Y   C +C  C +G    C +  G   +G    D +   ++     G  
Sbjct: 80  ELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGA---DSEGNHALCTHDQGVV 135
Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA 199
             HF   S+F+ Y +  + +  K+    P++ +  LGCG+ TG GA  N  KV P S   
Sbjct: 136 NDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFV 195
Query: 200 VFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259
            +G G V             S +I +DI   + + AK  G T  +N K  D P+  +  +
Sbjct: 196 TWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD-PVAAI-KE 253
Query: 260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ----LVTGR 315
           +TDGGV+++ E  G+  +++  ++      G    + V  + Q  +T  F     L+ G+
Sbjct: 254 ITDGGVNFALESTGSPEILKQGVD----ALGILGKIAVVGAPQLGTTAQFDVNDLLLGGK 309
Query: 316 VWKGTAFGGFKSRSQVPWLVDKYMK 340
              G   G    +  +P LV  Y +
Sbjct: 310 TILGVVEGSGSPKKFIPELVRLYQQ 334

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGH 69
           KAAV  +  +PL I++V+      GEV ++I    +CHTD +   G  P +   P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           E  GIVE VG GVT ++ GD V IP   + C  C +C SG+  LC             + 
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EHQ 109
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
           + + +S++G           +++Y       V KI      ++   + C   T   A+  
Sbjct: 110 KNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV 159
Query: 189 TAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
           T   +PG  VA++G+G +             + V+ +DI  +K + AK  G    VNP  
Sbjct: 160 TG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIGDEKLELAKELGADLVVNPLK 217
Query: 249 HD 250
            D
Sbjct: 218 ED 219

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 127/291 (43%), Gaps = 30/291 (10%)
Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
           T KAAV      PL IE+V+V  P  G+V +KI  + +CHTD +   G  P +   P I 
Sbjct: 6   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V +VG GVT V+ GD V IP     C  C+ C +G   LC             
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC------------E 113
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
           + + + +S+NG    + +    +    +  +V  A+I P        +L  GV    G  
Sbjct: 114 SQQNTGYSVNGGYAEYVLADPNYVG-ILPKNVEFAEIAP--------ILCAGVTVYKGLK 164
Query: 187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
              A+  PG  VA+ G+G +               V  IDID  K + A+  G +  VN 
Sbjct: 165 QTNAR--PGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA 221
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
           +  D P++ +  D+  GG         + S    A+    +G GT  +VG+
Sbjct: 222 RQED-PVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGL 268

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 108/242 (44%), Gaps = 26/242 (10%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGH 69
           KAAV  +  +PL I++V+      GEV ++I    +CHTD +   G  P +   P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           E  GIVE VG GVT ++ GD V IP   + C  C +C SG+  LC             + 
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EHQ 109
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
           + + +S++G           +++Y       V KI      ++   + C   T   A+  
Sbjct: 110 KNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV 159
Query: 189 TAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
           T   +PG  VA++G+G               + V+ +DI  +K + AK  G    VNP  
Sbjct: 160 TG-AKPGEWVAIYGIGGFGHVAVQYAKAMGLN-VVAVDIGDEKLELAKELGADLVVNPLK 217
Query: 249 HD 250
            D
Sbjct: 218 ED 219

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
           T KAAV     KPL I++V +  P  G++++ I  + +CHTD +   G  P +   P I 
Sbjct: 25  TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V +VG GV  V+ GD V IP     C  C+ C  G   LC +           
Sbjct: 85  GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEE----------- 133
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
               + +S+NG           F++Y V     V  +      +++  + C   T    V
Sbjct: 134 -QLNTGYSVNGG----------FAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT----V 178
Query: 187 WNTAKV---EPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEF 243
           +   KV   +PG  V + G+G +             + V  +DID +K D A+  G T  
Sbjct: 179 YKGLKVTDTKPGDWVVISGIGGLGHMAVQYARAMGLN-VAAVDIDDRKLDLARRLGATVT 237
Query: 244 VNPKDHDKPIQQVLVDLTDGG 264
           VN K    P   +  + TDGG
Sbjct: 238 VNAKTVADPAAYIRKE-TDGG 257

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 105/245 (42%), Gaps = 32/245 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGH 69
           KAAV      PL I++V V  P  G+V++KI  + +CHTD +   G  P +   P I GH
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63
Query: 70  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           E  G V +VG GV+ V+ GD V +P   + C  C+ C  G   LC K             
Sbjct: 64  EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK------------Q 111
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
           + + +S+NG           + +Y V     V  +  +    ++  + C   T    V+ 
Sbjct: 112 QNTGYSVNGG----------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVT----VYK 157
Query: 189 TAKV---EPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
             KV    PG  V + G+G +              RV  +DID  K + A+  G    VN
Sbjct: 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN 216
Query: 246 PKDHD 250
            +D D
Sbjct: 217 ARDTD 221

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 127/299 (42%), Gaps = 33/299 (11%)
Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
           T K  + +E +  L  +D+ V  P+A E+ I + ++ +CHTD + W G  P  +  P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE AG+V  +GE V   + GD+  I      C  C++C+ G  + C             
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC------------- 111
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                   ++G     +    +F QY     V  A I     L +V  + C   T   A+
Sbjct: 112 ----PHADLSG-----YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL 162
Query: 187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
             +A +  G  VA+ G                  RV+GID    K +  ++ G   F++ 
Sbjct: 163 -KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDF 221
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQ 302
              +K I   ++  TDGG       + NVSV  AA+E      +  GT+V+VG+ A  +
Sbjct: 222 TK-EKDIVGAVLKATDGGA----HGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAK 275

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 35/324 (10%)
Query: 10  CKAAVAWEPNKPLVIEDVQVAPPQAG--EVRIKILFTALCHTDAYTWSGKDPEGL---FP 64
            KAA   E NKPL IEDV   P   G  +V ++I    +CHTD +   G   E L    P
Sbjct: 16  LKAARLHEYNKPLRIEDVDY-PRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 74
Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
             LGHE  G +E V EGV  ++ GD VI         C  C++G+   C           
Sbjct: 75  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE---------- 124
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
             N      +I+G     FM TS  S   +  D+S  K+   APL    +      T   
Sbjct: 125 --NLEFPGLNIDGG-FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGI------TAYR 175
Query: 185 AVWNTAK-VEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEF 243
           AV   A+ + PG+ VA+ G+G +             + VI +D+  +K   A+  G    
Sbjct: 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV 235
Query: 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
           V+ +    P++QV+ +LT G GV+ + + +G+ + +        +  G  +IVG    G 
Sbjct: 236 VDAR--RDPVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGR-MGRLIIVG---YGG 288
Query: 303 EISTRPFQLVTGRV-WKGTAFGGF 325
           E+     ++++  V ++G+  G +
Sbjct: 289 ELRFPTIRVISSEVSFEGSLVGNY 312

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 81.3 bits (199), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
           +V I IL+  +CH+D ++   +  EG++P I GHE AGI++ VG+GV + + GD V + C
Sbjct: 31  DVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGC 90
Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
           +   C+ CK CK  +   C KV       V   D    F  N +P  H  G   +S   V
Sbjct: 91  FVNSCKACKPCKEHQEQFCTKV-------VFTYDCLDSFHDN-EP--HMGG---YSNNIV 137
Query: 155 VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLG 204
           V +  V  +D  APL+KV  L C   T    +   +KV  G+ V V G G
Sbjct: 138 VDENYVISVDKNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFG 186

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 44/279 (15%)
Query: 7   VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF--P 64
           ++  KAA+  + ++PL IEDV +  PQ  EV I+I    +C TD   W G + +  F  P
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLP 60
Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGK--VRGATGA 122
            ILGHE AG +  VGE + +V+ GD+V+         C++C+ GK N+C    + G T  
Sbjct: 61  IILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT 181
           G                         FS+Y +V     + K++  +P++   L   G  T
Sbjct: 120 G------------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGT-T 154
Query: 182 GLGAV-----WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXS-RVIGIDIDPKKFDRA 235
            +GA+     + +   EP  +V V G+G +             +  ++GI    K  D A
Sbjct: 155 SMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212
Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
              G       KD +  I +    LTDG G   + + +G
Sbjct: 213 LELGADYVSEMKDAESLINK----LTDGLGASIAIDLVG 247

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 134/326 (41%), Gaps = 25/326 (7%)
Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +   A V  + N+PLV ++ +++    G + ++IL   +C +D + + G+DP    P IL
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75
Query: 68  GHEAAG-IVESVGEGV----TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           GHE AG +VE  GE        ++PGD ++      C EC +CK  K       R   G 
Sbjct: 76  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG- 134
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
              +N   S +        H  G   +S + V+  +  V K+  +  LD + +  C   T
Sbjct: 135 ---INRGCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGAT 182
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVT 241
              A     +   G  V + G G +               VI I   P +   A+  G  
Sbjct: 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242
Query: 242 EFVNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
             +N ++   +  ++ ++D+T G G D+  E  G+   +    E   +G G   + GVA 
Sbjct: 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAV 301
Query: 300 SGQEISTRPFQLVTGRVWKGTAFGGF 325
               +   PF++    V K   F G 
Sbjct: 302 PQDPV---PFKVYEWLVLKNATFKGI 324

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 23/232 (9%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDPEGLFPCILGHEAAGIVESVGE 80
           L + D+ V  P   EVR+++   AL H D +   G   P+   P +LG + +G+V++VG 
Sbjct: 15  LEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGP 74
Query: 81  GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
           GV    PGD V+      C  C+ C +G+ NLC                  R+ I G+  
Sbjct: 75  GVEGFAPGDEVVINPGLSCGRCERCLAGEDNLC-----------------PRYQILGE-- 115
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
            H  G  T+++Y V+ + ++A        ++   +     T    V +   V PG  V V
Sbjct: 116 -HRHG--TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLV 172
Query: 201 FGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
              G+              +RVI       K  RAK  G  E VN    D P
Sbjct: 173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWP 224

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 121/302 (40%), Gaps = 29/302 (9%)
Query: 13  AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAA 72
           AV  E    + + +V +  P   ++ +K+    +C TD +   G+ P    P  LGHE  
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS-TPPVTLGHEFC 84
Query: 73  GIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSR 132
           GIV   G  V ++ PG  +       C  C  C++G+ NLC  +R     G+  +   + 
Sbjct: 85  GIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR---AIGIHRDGGFAE 141
Query: 133 FSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV 192
           + +  +          F     +  V  A  +P A     CL G           + + +
Sbjct: 142 YVLVPR-------KQAFEIPLTLDPVHGAFCEPLA----CCLHG----------VDLSGI 180
Query: 193 EPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
           + GS VA+ G G +             + VI       K   A+  G T  V+P   D  
Sbjct: 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDV- 239
Query: 253 IQQVL--VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ 310
           ++ +   V L  GGVD   EC G    ++ +      G GT VI+GV   G+++   PF 
Sbjct: 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFD 298
Query: 311 LV 312
           ++
Sbjct: 299 IL 300

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           ILGHEA G V  VG  V + +PGD VI PC   + R  +     + +  G + G      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGW----- 110
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQAPLDKVCLLGCGVPTG 182
               + S F               F +Y  V+D  +++A +    PL+   ++   + TG
Sbjct: 111 ----KFSNFK-----------DGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTG 155
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
                  A +E G+ VAV G+G V              R+I +   P   D AK +G T+
Sbjct: 156 FHGA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATD 214
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
            VN K  D PI+  +++LT+G GVD +    GN  +M  A++    G
Sbjct: 215 IVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           K+ +  +PN+  +IE  ++  P AGEVR+K+    +C +D++ + G +P   +P ++GHE
Sbjct: 22  KSILIEKPNQLSIIER-EIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE 80
Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 113
             G++++VGEGV   + G+ V       C  C  C  GK N+C
Sbjct: 81  FFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVC 123

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 39  IKILFTALCHTDAYT-WSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQ 96
           ++ L  A C +D +T + G   E     ILGHEA G V  VG  V + +PGD V+ P   
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT 87
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH 156
            + R  +  +    +  G + G   + V        F +N                    
Sbjct: 88  PDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDA------------------ 129
Query: 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXX 216
           D+++A +  + PL+   ++   + TG       A +E G+ VAV G+G V          
Sbjct: 130 DMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKL 188
Query: 217 XXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV 275
               R+I +   P   D AK +G T+ VN K  D PI+  +++LT+G GVD +    GN 
Sbjct: 189 RGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNA 246
Query: 276 SVMRAALECCHKG 288
            +M  A++    G
Sbjct: 247 DIMATAVKIVKPG 259

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 39  IKILFTALCHTDAYT-WSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQ 96
           ++ L  A C +D +T + G   E     ILGHEA G V  VG  V + +PGD V+ P   
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT 87
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH 156
            + R  +  +    +  G + G   + V        F +N                    
Sbjct: 88  PDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDA------------------ 129
Query: 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXX 216
           D+++A +  + PL+   ++   + TG       A +E G+ VAV G+G V          
Sbjct: 130 DMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKL 188
Query: 217 XXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV 275
               R+I +   P   D AK +G T+ VN K  D PI+  +++LT+G GVD +    GN 
Sbjct: 189 RGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNA 246
Query: 276 SVMRAALECCHKG 288
            +M  A++    G
Sbjct: 247 DIMATAVKIVKPG 259

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           LV ++++   P   E  + + +  +CHTD +  +G D       +LGHE  GIV+ +G  
Sbjct: 16  LVEKELRAIKPN--EALLDMEYCGVCHTDLHVAAG-DYGNKAGTVLGHEGIGIVKEIGAD 72
Query: 82  VTEVQPGDHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
           V+ +Q GD V   +  E C  C++C SG    C +V+ A             +S++G   
Sbjct: 73  VSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAG------------YSVDG--- 117
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
                     +  VV D +V   D   P++   +   GV T        + V+PG    +
Sbjct: 118 ------GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTT--YKAIKVSGVKPGDWQVI 169
Query: 201 FGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
           FG G +             ++VI +DI+  K + AK  G    +N  D + P+ ++   +
Sbjct: 170 FGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVN-PVDEIK-KI 227
Query: 261 TDG-GVDYSFECIGNVSVMRAALE 283
           T G GV  +  C    +V R A E
Sbjct: 228 TGGLGVQSAIVC----AVARIAFE 247

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 127/336 (37%), Gaps = 45/336 (13%)
Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYT----WSGKDPEGLF 63
           +  KA  A+   +PL   D+    P   +V+I+I +  +CH+D +     W+G     ++
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT----VY 76
Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           PC+ GHE  G V +VG+ V +  PGD V + C    C+ C+ C+ G  N C  + G   +
Sbjct: 77  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 136
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPT 181
                          +P +   G   +SQ  VVH+  V +I  PQ  L  V  L C   T
Sbjct: 137 -----------PTPDEPGHTLGG---YSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGIT 182
Query: 182 GLGAV--WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFG 239
               +  W                                + V+       K + AK  G
Sbjct: 183 TYSPLRHWQAGP----GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG 238
Query: 240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE---CCHKGWGTSVIVG 296
             E VN ++ D+    +           SF+ I N       L+      K  GT  +VG
Sbjct: 239 ADEVVNSRNADEMAAHL----------KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVG 288
Query: 297 VAASGQEISTRPFQLVTG-RVWKGTAFGGFKSRSQV 331
             A+  + S   F L+   R   G+  GG     ++
Sbjct: 289 APATPHK-SPEVFNLIMKRRAIAGSMIGGIPETQEM 323

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 34/264 (12%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           LV ++++   P   E  + + +  +CHTD +  +G D       +LGHE  GIV+ +G  
Sbjct: 16  LVEKELRAIKPN--EALLDMEYCGVCHTDLHVAAG-DFGNKAGTVLGHEGIGIVKEIGAD 72
Query: 82  VTEVQPGDHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
           V+ +Q GD V   +  E C  C++C SG    C +V+ A             +S++G   
Sbjct: 73  VSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAG------------YSVDG--- 117
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
                     +  VV D +V   D   P++   +   GV T        + V+PG    +
Sbjct: 118 ------GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTT--YKAIKVSGVKPGDWQVI 169
Query: 201 FGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
           FG G +             ++VI +DI+  K + AK  G    +N  D + P+ ++   +
Sbjct: 170 FGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVN-PVDEIK-KI 227
Query: 261 TDG-GVDYSFECIGNVSVMRAALE 283
           T G GV  +  C    +V R A E
Sbjct: 228 TGGLGVQSAIVC----AVARIAFE 247

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLF--PCIL 67
           +A     P + L + D  V  P  GE+ +++   ++C TD + W       G    P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61
Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHE +G+VE+VG GV   Q GDHV       C  C  C++G  ++C   +      ++  
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ------ILGV 115
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLL---GCGVPTGL 183
           DR                   F++Y VV     A ++P+  P +   +L   G  V T  
Sbjct: 116 DRD----------------GGFAEYVVV-PAENAWVNPKDLPFEVAAILEPFGNAVHT-- 156
Query: 184 GAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEF 243
             V+  + V  G  V + G G +               ++  D +P +   A+ +     
Sbjct: 157 --VYAGSGVS-GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRL 212
Query: 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 303
           VNP + D  + +V+  +T  GV+   E  GN + +   L     G G + I+G+ +    
Sbjct: 213 VNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIR 269
Query: 304 ISTRPFQLVTGRVWKG-TAFGGFKSRSQVPWL 334
                F L    V +G TAFG    R    W+
Sbjct: 270 -----FDLAGELVMRGITAFGIAGRRLWQTWM 296

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 32/229 (13%)
Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCY 95
           EVR+KI  + LC +D      K+    +P  LGHE +G +++VG GV ++ PGD V    
Sbjct: 27  EVRVKIASSGLCGSD-LPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVP 85
Query: 96  QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQY 152
              C  C  C  G  + C K                         Y F+G+     F++Y
Sbjct: 86  LLPCFTCPECLKGFYSQCAK-------------------------YDFIGSRRDGGFAEY 120
Query: 153 TVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXX 212
            VV   +V  +    P++    +   +  GL A       E  +++ + G GT+      
Sbjct: 121 IVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCENKNVI-IIGAGTIGLLAIQ 178
Query: 213 XXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDL 260
                    V  IDI  +K   AK+FG  +  N  +   P +Q VL +L
Sbjct: 179 CAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLREL 227

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 117/304 (38%), Gaps = 38/304 (12%)
Query: 36  EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
           +VR K+L+  +CH+D ++        ++P + GHE  G V  VG  V +V  GD V + C
Sbjct: 43  DVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGC 102
Query: 95  YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQ 151
               C  C+ C +   N C K+                  +    IYH  GT T   +S 
Sbjct: 103 LVGACHSCESCANDLENYCPKM-----------------ILTYASIYH-DGTITYGGYSN 144
Query: 152 YTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXX 211
           + V ++  + +     PLD    L C   T    +      EPG  + +           
Sbjct: 145 HMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGI-VGLGGLGHVA 203
Query: 212 XXXXXXXXSRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270
                   S+V  I   P K + A KNFG   F+  +D ++   Q      DG +D    
Sbjct: 204 VKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ--MQAAAGTLDGIID---- 257
Query: 271 CIGNVSVMRAALEC--CHKGWGTSVIVGVAASGQEISTRPFQLVTGR-VWKGTAFGGFKS 327
               VS +   L      K  G  ++VG      E+    F L+ GR +  G+  GG K 
Sbjct: 258 ---TVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPA--FSLIAGRKIVAGSGIGGMKE 312
Query: 328 RSQV 331
             ++
Sbjct: 313 TQEM 316

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 92/240 (38%), Gaps = 41/240 (17%)
Query: 19  NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF--PCILGHEAAGIVE 76
           ++P+V+ D+    P  GE+ +K+    LCH+D +       +  +  P  LGHE  G V 
Sbjct: 11  SEPVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVA 69
Query: 77  SVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN 136
            +GEGVT    GD V       C  C  C  G+ N C               R +   I 
Sbjct: 70  ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYC--------------TRAADLGIT 115
Query: 137 ----GKPIYHFMGTSTFSQYTVV----HDVSVAKIDP--QAPLDKVCLLGCGVPTGLGAV 186
               G P        + ++Y +V    H V +  +DP   APL    L      T   A+
Sbjct: 116 PPGLGSP-------GSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGL------TPYHAI 162
Query: 187 WNTAK-VEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
                 + PGS   V G+G +             +RVI +D+D  +   A+  G    V 
Sbjct: 163 SRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 45/309 (14%)
Query: 12  AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLF--PCILG 68
           +AV ++ N  L +E   +  P+  EV +++ +  +C +D + +  G+  + +   P ++G
Sbjct: 7   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 65
Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           HEA+G V  VG+ V  ++ GD V       CR C+FCK GK NLC               
Sbjct: 66  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 110
Query: 129 RKSRFSINGKPIYHFMGT----STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
                     P   F  T       ++Y V       K+     L++  LL    P  +G
Sbjct: 111 ----------PDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLE---PLSVG 157
Query: 185 A-VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFG--VT 241
                 A V+ G+ V V G G +             + V+     P++ + AKN G  VT
Sbjct: 158 VHACRRAGVQLGTTVLVIGAGPI-GLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT 216
Query: 242 EFVNP-KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
             V+P K+ +  I + +        + + +C GN   +   +     G GT ++VG+   
Sbjct: 217 LVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGM--- 272
Query: 301 GQEISTRPF 309
           G ++ T P 
Sbjct: 273 GSQMVTVPL 281

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 37/251 (14%)
Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--------DPEGLFPCILG 68
           E  KPL +ED+ +  P+  +V IKI    +CH+D +   G+        D     P  LG
Sbjct: 8   EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 69  HEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           HE AG +E VG+ V     GD V +  ++ E   C +C+ G+ +LC              
Sbjct: 68  HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGN-CYYCRIGEEHLC-------------- 112
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
           D      IN            +++Y +V H   + K+   + ++   L   GV T     
Sbjct: 113 DSPRWLGINYD--------GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAV- 163
Query: 187 WNTAKVEPGSIVAVFGLGT-VXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
              A ++P   + V G G  +             + +IG+D+  +  + AK  G    +N
Sbjct: 164 -RKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVIN 222
Query: 246 PKDHDKPIQQV 256
               D P+ ++
Sbjct: 223 ASSQD-PVSEI 232

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 35/294 (11%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLF--PCILGHEAAGIVESV 78
           L +E+  +  P   EV +K+    +C +D + W  G+  + +   P +LGHEA+G V  V
Sbjct: 18  LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKV 77
Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF-SING 137
           G  V  +QPGD V     A  +  +FCK G+ NL   +     A    +    RF   N 
Sbjct: 78  GSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFC--ATPPDDGNLCRFYKHNA 135
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
              Y      TF +  ++  +SV                     G+ A    A V  G+ 
Sbjct: 136 NFCYKLPDNVTFEEGALIEPLSV---------------------GIHA-CRRAGVTLGNK 173
Query: 198 VAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP--IQQ 255
           V V G G +             ++V+  D+   +  +AK  G  +F+    ++ P  I +
Sbjct: 174 VLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVG-ADFILEISNESPEEIAK 232
Query: 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
            +  L     + + EC G  + ++A +   H G GT V+VG+   G E+++ P 
Sbjct: 233 KVEGLLGSKPEVTIECTGVETSIQAGIYATHSG-GTLVLVGL---GSEMTSVPL 282

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 111/278 (39%), Gaps = 41/278 (14%)
Query: 26  DVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGLFPC-ILGHEAAGIVESVGEGV 82
           +V V  P  GEV IK+L T++C TD   Y W+      + P  I+GHE AG V  VG GV
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGV 80
Query: 83  TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 142
            ++Q GD++       C +C  CK  + ++C   +                      I+ 
Sbjct: 81  EDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTK----------------------IFG 118
Query: 143 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVA 199
                 F+ Y +V   +  K     P +   L   LG  V T L      A    G    
Sbjct: 119 VDMDGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVL------AGPIAGRSTL 172
Query: 200 VFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDR--AKNFGVTEFVNPKDHDKPIQQVL 257
           + G G +               V  I  +P +F R  AK  G    VNP + D P++ V+
Sbjct: 173 ITGAGPLGLLGIAVAKASGAYPV--IVSEPSEFRRKLAKKVGADYVVNPFEED-PVKFVM 229
Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVI 294
            D+TDG GV+   E  G    +   L+    G   S++
Sbjct: 230 -DITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLL 266

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 106/269 (39%), Gaps = 41/269 (15%)
Query: 26  DVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGLFP-CILGHEAAGIVESVGEGV 82
           +V V  P  GEV IK+L T++C TD   Y W+      + P  I GHE AG V  +G GV
Sbjct: 20  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 79
Query: 83  TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 142
             ++ GD+V       C +C  C+ G+ ++C   +                      I+ 
Sbjct: 80  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK----------------------IFG 117
Query: 143 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVA 199
                 F++Y VV   ++ K     P +   L   LG  V T L    +      G  V 
Sbjct: 118 VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPIS------GKSVL 171
Query: 200 VFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDR--AKNFGVTEFVNPKDHDKPIQQVL 257
           + G G +               V  I  +P  F R  AK  G    +NP + D  + + +
Sbjct: 172 ITGAGPLGLLGIAVAKASGAYPV--IVSEPSDFRRELAKKVGADYVINPFEED--VVKEV 227
Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECC 285
            D+TDG GVD   E  G    +   L+  
Sbjct: 228 XDITDGNGVDVFLEFSGAPKALEQGLQAV 256

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 106/269 (39%), Gaps = 41/269 (15%)
Query: 26  DVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGLFP-CILGHEAAGIVESVGEGV 82
           +V V  P  GEV IK+L T++C TD   Y W+      + P  I GHE AG V  +G GV
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 80
Query: 83  TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 142
             ++ GD+V       C +C  C+ G+ ++C   +                      I+ 
Sbjct: 81  EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK----------------------IFG 118
Query: 143 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVA 199
                 F++Y VV   ++ K     P +   L   LG  V T L    +      G  V 
Sbjct: 119 VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPIS------GKSVL 172
Query: 200 VFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDR--AKNFGVTEFVNPKDHDKPIQQVL 257
           + G G +               V  I  +P  F R  AK  G    +NP + D  + + +
Sbjct: 173 ITGAGPLGLLGIAVAKASGAYPV--IVSEPSDFRRELAKKVGADYVINPFEED--VVKEV 228
Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECC 285
            D+TDG GVD   E  G    +   L+  
Sbjct: 229 XDITDGNGVDVFLEFSGAPKALEQGLQAV 257

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 27/227 (11%)
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           ILGHEA G V  VG  V + +PGD VI PC   + R  +     + +  G + G      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGW----- 110
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQAPLDKVCLLGCGVPTG 182
               + S F               F +Y  V+D  +++A +    PL+   ++   + TG
Sbjct: 111 ----KFSNFK-----------DGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTG 155
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
                  A +E GS V V G+G V              R+IG+   P   + AK +G T+
Sbjct: 156 FHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD 214
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
            +N K  +  I+  ++ LT+G GVD      G    +  A++    G
Sbjct: 215 ILNYK--NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 259

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 113/293 (38%), Gaps = 33/293 (11%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESV 78
           L +E+  +  P   EV +++    +C +D + W            P +LGHEA+G VE V
Sbjct: 19  LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKV 78
Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF-SING 137
           G  V  ++PGD V     A     +FCK G+ NL   +     A    +    RF   N 
Sbjct: 79  GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPDDGNLCRFYKHNA 136
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
              Y      TF +  ++  +SV                     G+ A      V  G  
Sbjct: 137 AFCYKLPDNVTFEEGALIEPLSV---------------------GIHAC-RRGGVTLGHK 174
Query: 198 VAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQV 256
           V V G G +             ++V+  D+   +  +AK  G    +   K+  + I + 
Sbjct: 175 VLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARK 234
Query: 257 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
           +        + + EC G  + ++A +     G GT V+VG+   G E++T P 
Sbjct: 235 VEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSEMTTVPL 283

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           ILGHEA G V  VG  V + +PGD VI PC   + R  +     + +  G + G      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGW----- 110
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTG 182
               + S F               F +Y  V+  D+++A +    PL+   ++   + TG
Sbjct: 111 ----KFSNFK-----------DGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTG 155
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
                  A ++ GS V V G+G V              R+IG+   P   + AK +G T+
Sbjct: 156 FHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD 214
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
            +N K+    + QV+  LT+G GVD      G    +  A+     G
Sbjct: 215 ILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 113/293 (38%), Gaps = 33/293 (11%)
Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESV 78
           L +E+  +  P   EV ++     +C +D + W            P +LGHEA+G VE V
Sbjct: 19  LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKV 78
Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF-SING 137
           G  V  ++PGD V     A     +FCK G+ NL   +     A    +    RF   N 
Sbjct: 79  GSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFC--ATPPDDGNLCRFYKHNA 136
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
              Y      TF +  ++  +SV                     G+ A      V  G  
Sbjct: 137 AFCYKLPDNVTFEEGALIEPLSV---------------------GIHAC-RRGGVTLGHK 174
Query: 198 VAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQV 256
           V V G G +             ++V+  D+   +  +AK  G    +   K+  + I + 
Sbjct: 175 VLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARK 234
Query: 257 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF 309
           +        + + EC G  + ++A +     G GT V+VG+   G E +T P 
Sbjct: 235 VEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSEXTTVPL 283

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 25/253 (9%)
Query: 39  IKILFTALCHTDAYT-WSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQ 96
           ++ L  A C +D +T + G   E     ILGHEA G V  VG  V + +PGD V+ P   
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT 87
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH 156
            + R  +  +    +  G + G   + V        F +N                    
Sbjct: 88  PDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDA------------------ 129
Query: 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXX 216
           D+++A +  + PL+   ++   + TG       A +E GS V V G+G V          
Sbjct: 130 DMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 217 XXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV 275
               R+IG+   P   + AK +G T+ +N K+    + QV+  LT+G GVD      G  
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGS 246
Query: 276 SVMRAALECCHKG 288
             +  A++    G
Sbjct: 247 ETLSQAVKMVKPG 259

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 27/227 (11%)
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
           ILGHEA G V  VG  V + +PGD VI PC   + R  +       +  G + G      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGW----- 110
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQAPLDKVCLLGCGVPTG 182
               + S F               F +Y  V+D  +++A +    PL+   ++   + TG
Sbjct: 111 ----KFSNFK-----------DGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTG 155
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
                  A ++ GS V V G+G V              R+IG+   P   + AK +G T+
Sbjct: 156 FHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD 214
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288
            +N K+    + QV+  LT+G GVD      G    +  A+     G
Sbjct: 215 ILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 37  VRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQ 96
           V +K++ T +C +D +   G+        +LGHE  G V   G  V  +Q GD V   + 
Sbjct: 36  VILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG--TSTFSQYTV 154
             C  C+ CK   T +C  V  A   G                 Y  MG  T   ++Y +
Sbjct: 95  VACGRCRSCKEMHTGVCLTVNPARAGGAYG--------------YVDMGDWTGGQAEYVL 140
Query: 155 V--HDVSVAKI-DPQAPLDKVCLLGCG---VPTGL-GAVWNTAKVEPGSIVAVFGLGTVX 207
           V   D ++ K+ D    ++K+  L C    +PTG  GAV  TA V PGS V V G G V 
Sbjct: 141 VPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV--TAGVGPGSTVYVAGAGPVG 198
Query: 208 XXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPI-QQVLVDLTDGGVD 266
                       + VI  D++P +   AK  G    +     D P+ +Q+   L +  VD
Sbjct: 199 LAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVD 256
Query: 267 YSFECIG 273
            + + +G
Sbjct: 257 CAVDAVG 263

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 25/253 (9%)
Query: 39  IKILFTALCHTDAYT-WSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQ 96
           ++ L  A C +D +T + G   E     ILGHEA G V  VG  V + +PGD V+ P   
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT 87
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH 156
            + R  +  +    +  G + G   + V        F +N                    
Sbjct: 88  PDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDA------------------ 129
Query: 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXX 216
           D+++A +  + PL+   ++   + TG       A ++ GS V V G+G V          
Sbjct: 130 DMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 217 XXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV 275
               R+IG+   P   + AK +G T+ +N K+    + QV+  LT+G GVD      G  
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILNYKN-GHIVDQVM-KLTNGKGVDRVIMAGGGS 246
Query: 276 SVMRAALECCHKG 288
             +  A+     G
Sbjct: 247 ETLSQAVSMVKPG 259

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 35/266 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--------DPEGL 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G+        D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            P  LGHE AG +E VG+ V     GD V +  +Q E   C +C+ G+ +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEG-NCYYCRIGEEHLC-------- 112
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSVAKIDPQAPLDKVCLLGCGVP 180
                 D      IN      F G   +++Y +V H   + K+     ++   L   G+ 
Sbjct: 113 ------DSPRWLGIN------FDGA--YAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGIT 158
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
           T   AV   +     +++ V   G +             + +IG+D+  +  + AK  G 
Sbjct: 159 T-YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVD 266
              +N    D P+ ++       GVD
Sbjct: 218 DYVINASMQD-PLAEIRRITESKGVD 242

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 35/266 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--------DPEGL 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G+        D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            P  LGHE AG +E VG+ V     GD V +  +Q E   C +C+ G+ +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLC-------- 112
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSVAKIDPQAPLDKVCLLGCGVP 180
                 D      IN      F G   +++Y +V H   + K+     ++   L   G+ 
Sbjct: 113 ------DSPRWLGIN------FDGA--YAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGIT 158
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
           T   AV   +     +++ V   G +             + +IG+D+  +  + AK  G 
Sbjct: 159 T-YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVD 266
              +N    D P+ ++       GVD
Sbjct: 218 DYVINASMQD-PLAEIRRITESKGVD 242

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKD-----PEGLFP 64
           KA +   PN  + ++DV      + G+++I+ ++  +C TD    +GK      P+G   
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF 61
Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 113
            +LGHEA G+VE    G ++   GD V+P  +  C  C+ C  G+ + C
Sbjct: 62  LVLGHEAIGVVEESYHGFSQ---GDLVMPVNRRGCGICRNCLVGRPDFC 107

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--------DPEGL 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G+        D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            P  LGHE AG +E VG+ V     GD V +   Q E   C +C+ G+ +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEG-NCYYCRIGEEHLC-------- 112
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSVAKIDPQAPLDKVCLLGCGVP 180
                 D      IN      F G   +++Y +V H   + K+     ++   L   G+ 
Sbjct: 113 ------DSPRWLGIN------FDGA--YAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGIT 158
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
           T   AV   +     +++ V   G +             + +IG+D+  +  + AK  G 
Sbjct: 159 T-YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVD 266
              +N    D P+ ++       GVD
Sbjct: 218 DYVINASMQD-PLAEIRRITESKGVD 242

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 35/266 (13%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--------DPEGL 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G+        D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVK 61
Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            P  LGHE AG +E VG+ V     GD V +  +Q E   C +C+ G+ +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEG-NCYYCRIGEEHLC-------- 112
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVSVAKIDPQAPLDKVCLLGCGVP 180
                 D      IN      F G   +++Y +V H     K+     ++   L   G+ 
Sbjct: 113 ------DSPRWLGIN------FDGA--YAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGIT 158
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
           T   AV   +     +++ V   G +             + +IG+D+  +  + AK  G 
Sbjct: 159 T-YRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVD 266
              +N    D P+ ++       GVD
Sbjct: 218 DYVINASMQD-PLAEIRRITESKGVD 242

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 11  KAAVAWEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKD-----PEGLFP 64
           KA +   PN  + ++DV      + G+++I+ ++  +C  D    +GK      P+G   
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61
Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 113
            +LGHEA G+VE    G ++   GD V+P  +  C  C+ C  G+ + C
Sbjct: 62  LVLGHEAIGVVEESYHGFSQ---GDLVMPVNRRGCGICRNCLVGRPDFC 107

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 100/253 (39%), Gaps = 25/253 (9%)
Query: 39  IKILFTALCHTDAYT-WSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH-VIPCYQ 96
           ++ L  A C +D +T + G   E     ILGHEA G V  VG  V + +PGD  V+P   
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAIT 87
Query: 97  AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH 156
            + R  +  +    +  G + G   + V        F +N                    
Sbjct: 88  PDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDA------------------ 129
Query: 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXX 216
           D+++A +  + PL+   ++   + TG       A ++ G  V V G+G V          
Sbjct: 130 DMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANH 188
Query: 217 XXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV 275
               R+  +       D A  +G T+ +N K+ D  I + ++  TDG GVD      G+V
Sbjct: 189 LGAGRIFAVGSRKHCCDIALEYGATDIINYKNGD--IVEQILKATDGKGVDKVVIAGGDV 246
Query: 276 SVMRAALECCHKG 288
                A++    G
Sbjct: 247 HTFAQAVKMIKPG 259

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 21 PLVIEDVQVAP--PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78
          P V++ V+  P  P   E++++     +   D Y  SG  P    P  LG EAAGIV  V
Sbjct: 13 PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKV 72
Query: 79 GEGVTEVQPGDHVIPCYQA 97
          G GV  ++ GD V+    A
Sbjct: 73 GSGVKHIKAGDRVVYAQSA 91

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 33  QAGEVRIKILFTALCHTDAYTWS-GKDPEGLFPC--ILGHEAAGIVESVGEGVTEVQPGD 89
           + GEV + +  T +C +D + W  G     +  C  +LGHE+AG V +V   V  ++ GD
Sbjct: 39  KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98
Query: 90  HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY-HFMGTST 148
            V    Q  C  C+ C +G+ N C +V   +   V    R+    +N   ++ H +G  +
Sbjct: 99  RVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRR---YVNHPAVWCHKIGNMS 155
Query: 149 FSQYTVVHDVSVA 161
           +    ++  +SVA
Sbjct: 156 YENGAMLEPLSVA 168

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 21 PLVIEDVQVAP----PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVE 76
          P V+E V   P    PQA  VR K +   L   D Y  SG  P    P  LG E AG+VE
Sbjct: 13 PEVLEYVDFEPEAPGPQAVVVRNKAI--GLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVE 70
Query: 77 SVGEGVTEVQPGDHV 91
          +VG+ VT  + GD V
Sbjct: 71 AVGDEVTRFKVGDRV 85

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGH 69
          AV    ++P+VIE  +   P++GE  ++ L   +C TD    +G     PEG    +LGH
Sbjct: 5  AVKRGEDRPVVIEKPR-PEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPC 94
          EA G+V  V    TE++ GD V+P 
Sbjct: 64 EAVGVV--VDPNDTELEEGDIVVPT 86

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 90/257 (35%), Gaps = 64/257 (24%)
Query: 25  EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC----ILGHEAAGIVESVGE 80
           ED  V      E+ IK  +T + + ++Y       +G++PC    +LG EA+G V + G+
Sbjct: 26  EDYPVPSISEEELLIKNKYTGVNYIESYFR-----KGIYPCEKPYVLGREASGTVVAKGK 80
Query: 81  GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
           GVT  + GD V                                                 
Sbjct: 81  GVTNFEVGDQV------------------------------------------------- 91
Query: 141 YHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCG---VPTGLGAVWNTAKVEPGS 196
             ++  STF+QY+ +     V K+      +++ L   G   V T L        V+ G 
Sbjct: 92  -AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGD 150
Query: 197 IVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 256
            V +F                  +  I +    +K   AK +G    +N    D  ++QV
Sbjct: 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKED-ILRQV 209
Query: 257 LVDLTDGGVDYSFECIG 273
           L      GVD SF+ +G
Sbjct: 210 LKFTNGKGVDASFDSVG 226

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 105/283 (37%), Gaps = 63/283 (22%)
Query: 12  AAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PC 65
           AAV  +   P   V E+V+V  P  G+VR++     +   D Y  +G  P  L     P 
Sbjct: 4   AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGI-PHPLVVGEPPI 62
Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           ++G EAA +VE VG GVT+   G+ V  C                               
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVCTCL------------------------------ 92
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
                        P+        +SQ  +     + K+     LD V L G  +  G+ A
Sbjct: 93  ------------PPL------GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLML-KGMTA 133
Query: 186 VW---NTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTE 242
            +    T KV+PG  V +                   + VIG     +K + A+  G   
Sbjct: 134 QYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH 193
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
            +N    D    +V+ ++T G GVD  ++ IG    ++ +L+C
Sbjct: 194 TINYSTQD--FAEVVREITGGKGVDVVYDSIGK-DTLQKSLDC 233

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 37  VRIKILFTALCHTDAYTWSGKD--PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 94
           V +K++ T +C +D + + G+   P+G    +LGHE  G V   G  V  +  GD V   
Sbjct: 35  VILKVVSTNICGSDQHIYRGRFIVPKG---HVLGHEITGEVVEKGSDVELMDIGDLVSVP 91
Query: 95  YQAECRECKFCKSGKTNLC 113
           +   C  C+ CK  ++++C
Sbjct: 92  FNVACGRCRNCKEARSDVC 110

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 91/252 (36%), Gaps = 36/252 (14%)
Query: 32  PQAGE--VRIKILFTALCHTDAYTW-SGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88
           P+AGE  + ++ L  +L + D     +G   +  FP +   + +G+VE+VG+ VT  +PG
Sbjct: 49  PEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPG 108
Query: 89  DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTS- 147
           D VI  +     +     +G+T                            P Y  +G + 
Sbjct: 109 DRVISTFAPGWLDGLRPGTGRT----------------------------PAYETLGGAH 140
Query: 148 --TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT 205
               S+Y V+ +             +   L C   T   A+     +  G  V V G G 
Sbjct: 141 PGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG 200
Query: 206 VXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 265
           V             + VI      +K DRA   G    +N  + D  +++V     D G 
Sbjct: 201 V-ALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDW-VERVYALTGDRGA 258
Query: 266 DYSFECIGNVSV 277
           D+  E  G   +
Sbjct: 259 DHILEIAGGAGL 270

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	345
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	0.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-172
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	5e-77
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-66
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-65
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	5e-64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-61
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	6e-61
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-61
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-60
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-57
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-55
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	3e-55
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-55
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	7e-55
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	7e-55
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-54
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	3e-53
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	3e-50
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	7e-49
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-40
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-39
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-32
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-31
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-29
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-29
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	9e-29
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-28
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-27
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	8e-26
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	4e-25
3gms_A	340	Putative NADPH:quinone reductase; structural genom	7e-25
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-24
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-22
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	6e-21
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	9e-21
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-19
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-18
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	9e-18
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-17
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	6e-17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-17
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	4e-16
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	3e-14
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	5e-14
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	4e-13
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	6e-11
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	1e-10
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-10
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-10
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-10
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	5e-06
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	5e-05
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	7e-05
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-04
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	2e-04
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	3e-04
3c85_A	183	Putative glutathione-regulated potassium-efflux S	5e-04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	6e-04
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	7e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  648 bits (1674), Expect = 0.0
 Identities = 238/337 (70%), Positives = 273/337 (81%), Gaps = 1/337 (0%)

Query: 5   GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP 64
            +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
            ILGH  AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G+
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121

Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
           M  D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG G
Sbjct: 122 MP-DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180

Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
           A  NTAK+EPGS+ AVFGLG VGLAV  G K AGASR+IG+DI+  KF RAK FG TE +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240

Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304
           NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+VGVAASG+EI
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300

Query: 305 STRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           +TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  641 bits (1656), Expect = 0.0
 Identities = 189/340 (55%), Positives = 237/340 (69%), Gaps = 2/340 (0%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
             P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID  +PL+KVCL+GCG  T
Sbjct: 120 RGTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           G G+    AKV  GS  AVFGLG VGL+V  G KAAGA+R+IG+DI+  KF +AK  G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           E VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVIVGV    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  640 bits (1653), Expect = 0.0
 Identities = 182/341 (53%), Positives = 232/341 (68%), Gaps = 4/341 (1%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M T G+ ITCKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+       P 
Sbjct: 1   MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
             FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K     
Sbjct: 61  K-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 119

Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
             G+M  D  SRF+  GKPIY+ MGTSTF++YTVV D++VAKIDP+APL+  CL+GCG  
Sbjct: 120 KTGLMA-DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFA 177

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           TG GA  NTAKV PGS  AVFGLG VG +   G KAAGASR+IG+     KF +A   G 
Sbjct: 178 TGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
           TE +NPKD+DKPI +V+ + T+GGVDY+ EC G +  M  AL+  + G G +V++G+A+ 
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297

Query: 301 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            + +   P  L+TGR  KG+ FGGFK   +V  LVD YMKK
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  635 bits (1641), Expect = 0.0
 Identities = 197/340 (57%), Positives = 247/340 (72%), Gaps = 2/340 (0%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T G+VI CKAAVAWE NKPLVIE+++V  P A E+RIKI+ T +CHTD Y       + 
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K      
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
              +M+ +++RF+  G+ +  F+GTSTFSQYTVV+ ++VAKIDP APLD VCLLGCGV T
Sbjct: 121 PD-VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           G GA  NTAKVEPGS  AVFGLG VGLA   G  +AGA R+I +D++P KF++AK FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           +FVNP DH +PI QVL  +T+GGVD+S EC+GNV VMR ALE C KGWG SV+VG     
Sbjct: 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL- 298

Query: 302 QEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            +++TRP QL+ GR WKG+ FGGFK +  VP +V  Y+ K
Sbjct: 299 HDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  635 bits (1641), Expect = 0.0
 Identities = 173/342 (50%), Positives = 230/342 (67%), Gaps = 6/342 (1%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T+G+VI CKAA+AW+   PL IE+++V+PP+A EVRI+++ T +C TD      K    L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-AL 60

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR---GA 119
           FP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
           T    +M DR SRF+  G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GCG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180

Query: 180 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
            +G GA  NTAKV PGS  AVFGLG VGL+   G K AGASR+I IDI+ +KF +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240

Query: 240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
            T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    ++AA++C   GWG+  +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK- 299

Query: 300 SGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
              E++     ++ GR   GT FGG+KS   VP LV  Y  K
Sbjct: 300 -VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  546 bits (1410), Expect = 0.0
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 9/339 (2%)

Query: 6   QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
           ++    AAV         ++ +++  PQ  EV +K++ T +CHTD      K P    P 
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPA 61

Query: 66  ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           +LGHE +GI+E++G  VTE+Q GDHV+  Y   C +C  C +G    C +  G   +G  
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD 120

Query: 126 MNDRKSRFSINGKPIY--HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 183
             +       + + +   HF   S+F+ Y +  + +  K+    P++ +  LGCG+ TG 
Sbjct: 121 S-EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGA 179

Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
           GA  N  KV P S    +G G VGL+    AK  GAS +I +DI   + + AK  G T  
Sbjct: 180 GACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV 239

Query: 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 303
           +N K  D      + ++TDGGV+++ E  G+  +++  ++      G   +VG    G  
Sbjct: 240 INSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTT 296

Query: 304 ISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
                  L + G+   G   G    +  +P LV  Y + 
Sbjct: 297 AQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQG 335

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  482 bits (1243), Expect = e-172
 Identities = 84/344 (24%), Positives = 140/344 (40%), Gaps = 27/344 (7%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +   A V  + N+PLV ++ +++    G + ++IL   +C +D + + G+DP    P IL
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75

Query: 68  GHEAAGIVESVGEGVT-----EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           GHE AG V  V           ++PGD ++      C EC +CK  K       R     
Sbjct: 76  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNR----K 131

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
              +N   S +        H  G   +S + V+  +  V K+  +  LD + +  C   T
Sbjct: 132 VYGINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGAT 182

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
              A     +   G  V + G G +GL     A++ GA  VI I   P +   A+  G  
Sbjct: 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242

Query: 242 EFVNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
             +N ++   +  ++ ++D+T G G D+  E  G+   +    E   +G G   + GVA 
Sbjct: 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAV 301

Query: 300 SGQEISTRPFQLVTGRVWKGTAFGG--FKSRSQVPWLVDKYMKK 341
               +   PF++    V K   F G      S     V    + 
Sbjct: 302 PQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRN 342

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  239 bits (611), Expect = 5e-77
 Identities = 74/330 (22%), Positives = 114/330 (34%), Gaps = 29/330 (8%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILG 68
           KA    E     V+ D+    P  GE+ +K+    LCH+D +       +     P  LG
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           HE  G V  +GEGVT    GD V       C  C  C  G+ N C +             
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP----- 116

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV-CLLGCGVPTGLGAVW 187
                   G          + ++Y +V                   L   G+        
Sbjct: 117 --PGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
               + PGS   V G+G +G    +  +A  A+RVI +D+D  +   A+  G    V   
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG 224

Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
                   +  +LT G G    F+ +G  S +  A +      G   +VG+ A       
Sbjct: 225 --AGAADAIR-ELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG 280

Query: 307 RPFQLVTGRVWKGTAFGGFKSRSQVPWLVD 336
             F +  G       +G   +RS++  +V 
Sbjct: 281 -FFMIPFGASVVTPYWG---TRSELMEVVA 306

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  211 bits (540), Expect = 4e-66
 Identities = 84/325 (25%), Positives = 135/325 (41%), Gaps = 38/325 (11%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDP 59
            S    V   KAA   E NKPL IEDV         +V ++I    +CHTD +   G   
Sbjct: 7   FSQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWH 66

Query: 60  EGL---FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 116
           E L    P  LGHE  G +E V EGV  ++ GD VI         C  C++G+   C  +
Sbjct: 67  ELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENL 126

Query: 117 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK---VC 173
                            +I+G           F+++      SV K+      +K   + 
Sbjct: 127 EF------------PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMA 164

Query: 174 LLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232
            L     T   AV      + PG+ VA+ G+G +G    +  K    + VI +D+  +K 
Sbjct: 165 PLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL 224

Query: 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGT 291
             A+  G    V+ +    P++QV+ +LT G GV+ + + +G+ + +        +  G 
Sbjct: 225 KLAERLGADHVVDAR--RDPVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GR 280

Query: 292 SVIVGVAASGQEISTRPFQLVTGRV 316
            +IVG    G E+     ++++  V
Sbjct: 281 LIIVGY---GGELRFPTIRVISSEV 302

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  210 bits (536), Expect = 2e-65
 Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 42/311 (13%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA         + + +V +  P   ++ +K+    +C TD +   G+ P    P  LGHE
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHE 82

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
             GIV   G  V ++ PG  +       C  C  C++G+ NLC  +R             
Sbjct: 83  FCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR------------- 129

Query: 131 SRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLG 184
                        +G      F++Y +V      +I              L C +     
Sbjct: 130 ------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL----H 173

Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
            V + + ++ GS VA+ G G +GL   + A+ AGA+ VI       K   A+  G T  V
Sbjct: 174 GV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV 232

Query: 245 NPKDHDKPIQQV--LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
           +P   D  ++ +   V L  GGVD   EC G    ++ +      G GT VI+GV   G+
Sbjct: 233 DPSAGD-VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGE 290

Query: 303 EISTRPFQLVT 313
           ++   PF ++ 
Sbjct: 291 KVEIEPFDILF 301

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  205 bits (524), Expect = 5e-64
 Identities = 75/343 (21%), Positives = 123/343 (35%), Gaps = 46/343 (13%)

Query: 11  KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
           K+ V       + + +  +       EVR+KI  + LC +D       +    +P  LGH
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFK-NGAHYYPITLGH 59

Query: 70  EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           E +G +++VG GV ++ PGD V       C  C  C  G  + C K              
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYD------------ 107

Query: 130 KSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGL 183
                        F+G+     F++Y VV   +V  +    P++       +  G+    
Sbjct: 108 -------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL---- 150

Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
            A    A+      V + G GT+GL   + A A GA  V  IDI  +K   AK+FG  + 
Sbjct: 151 HAFHL-AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQT 209

Query: 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ 302
            N  +      Q+   L +        E  G    +  A+E          +VG      
Sbjct: 210 FNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDL 266

Query: 303 EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKVNLM 345
            +++  F  +   + K     G       PW   ++     L+
Sbjct: 267 HLTSATFGKI---LRKELTVIGSWMNYSSPWPGQEWETASRLL 306

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  199 bits (508), Expect = 2e-61
 Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 46/305 (15%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
            A +  +P     + +V V  P  GEV IK+L T++C TD + +   +         P I
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEW-NEWAQSRIKPPQI 64

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           +GHE AG V  +G GV  ++ GD+V       C +C  C+ G+ ++C   +         
Sbjct: 65  MGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK--------- 115

Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
                             G  T   F++Y VV   ++ K     P +   L   LG  V 
Sbjct: 116 ----------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD 159

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           T L           G  V + G G +GL     AKA+GA  VI  +    + + AK  G 
Sbjct: 160 TVLAGP------ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213

Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
              +NP + D  + + ++D+TDG GVD   E  G    +   L+      G   ++G+  
Sbjct: 214 DYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYP 270

Query: 300 SGQEI 304
               I
Sbjct: 271 GKVTI 275

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  197 bits (504), Expect = 6e-61
 Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 45/304 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
           +A     P + L + D  V  P  GE+ +++   ++C TD + W   D         P +
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKW-DAWARGRIRPPLV 60

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
            GHE +G+VE+VG GV   Q GDHV       C  C  C++G  ++C   +         
Sbjct: 61  TGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ--------- 111

Query: 127 NDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
                            +G      F++Y VV   +        P +   +    G  V 
Sbjct: 112 ----------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVH 155

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           T             G  V + G G +GL  A   +A+GA  ++  D +P +   A+ +  
Sbjct: 156 TVY-----AGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA- 209

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
              VNP + D  + +V+  +T  GV+   E  GN + +   L     G G + I+G+ + 
Sbjct: 210 DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSD 266

Query: 301 GQEI 304
               
Sbjct: 267 PIRF 270

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  197 bits (503), Expect = 8e-61
 Identities = 79/315 (25%), Positives = 123/315 (39%), Gaps = 37/315 (11%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCI 66
             KAA+  + ++PL IEDV +  PQ  EV I+I    +C TD   W G + +     P I
Sbjct: 3   KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           LGHE AG +  VGE + +V+ GD+V+         C++C+ GK N+C       G     
Sbjct: 63  LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI-IPG----- 115

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                  + NG           FS+Y +V               +   L     T +GA+
Sbjct: 116 ------QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAI 159

Query: 187 ---WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE 242
                        +V V G+G + +   +  KA   +  ++GI    K  D A   G   
Sbjct: 160 RQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY 219

Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
               KD +  I      LTDG G   + + +G         +   +  G  ++VG+   G
Sbjct: 220 VSEMKDAESLIN----KLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGME--G 272

Query: 302 QEISTRPFQLVTGRV 316
           + +S   F       
Sbjct: 273 KRVSLEAFDTAVWNK 287

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  196 bits (501), Expect = 2e-60
 Identities = 72/316 (22%), Positives = 125/316 (39%), Gaps = 38/316 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------KDPEGL 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G        +D    
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
            P  LGHE AG +E VG+ V     GD V          C +C+ G+ +LC   R   G 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR-WLG- 119

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
                      + +G           +++Y +V          +    +   L C   T 
Sbjct: 120 ----------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159

Query: 183 LGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
             AV   A ++P   + V G  G +G    + AKA   + +IG+D+  +  + AK  G  
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 218

Query: 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
             +N    D P+ ++   +T+  GVD   +   +   +    +   K  G  V+VG+   
Sbjct: 219 YVINASMQD-PLAEIR-RITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF-- 273

Query: 301 GQEISTRPFQLVTGRV 316
           G ++      +    +
Sbjct: 274 GADLHYHAPLITLSEI 289

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  188 bits (480), Expect = 3e-57
 Identities = 71/322 (22%), Positives = 117/322 (36%), Gaps = 58/322 (18%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
            + V       L +E+  +  P   EV +++    +C +D + W      G F    P +
Sbjct: 9   LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEY-GRIGNFIVKKPMV 66

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           LGHEA+G VE VG  V  ++PGD V      P         +FCK G+ NL   +     
Sbjct: 67  LGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPR-----ENDEFCKMGRYNLSPSIF---- 117

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL--- 174
                                F  T        ++   +     K+      ++  L   
Sbjct: 118 ---------------------FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEP 156

Query: 175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
           L  G+     A      V  G  V V G G +G+     AKA GA++V+  D+   +  +
Sbjct: 157 LSVGI----HAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 211

Query: 235 AKNFGVTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 293
           AK  G    +       + I + +        + + EC G  + ++A +     G GT V
Sbjct: 212 AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 270

Query: 294 IVGVAASGQEISTRPFQLVTGR 315
           +VG+ +    +   P      R
Sbjct: 271 LVGLGSEMTTV---PLLHAAIR 289

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  184 bits (470), Expect = 2e-55
 Identities = 59/330 (17%), Positives = 107/330 (32%), Gaps = 55/330 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF------ 63
             +  W   + + +E+V      +  E+ IK+    +C +D +     +   +       
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 64  -PCILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 116
            P  LGHE +G+V   G            + G+ V       C  C+ C  G  N C  +
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150

Query: 117 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-------DPQAPL 169
                 G          +++G           F++Y  V       +       +     
Sbjct: 151 NEL---GF---------NVDG----------AFAEYVKVDAKYAWSLRELEGVYEGDRLF 188

Query: 170 DKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
               L              +     + PG  V + G G +GLA     K AGAS+VI  +
Sbjct: 189 LAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 285
               + + AK  G    ++P   +    + ++D T+G G     E  G   ++   +E  
Sbjct: 246 PSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEV 303

Query: 286 H--KGWGTSVIVGVAASGQEISTRPFQLVT 313
                   + +  VA +  +I         
Sbjct: 304 IWRARGINATVAIVARADAKIPLTGEVFQV 333

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  183 bits (467), Expect = 3e-55
 Identities = 75/326 (23%), Positives = 115/326 (35%), Gaps = 55/326 (16%)

Query: 7   VITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTD--AYTWSGKDPEGLF 63
           V T      W       +E VQ     + GEV + +  T +C +D   +        G  
Sbjct: 12  VFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKH---GCIGPM 68

Query: 64  ----PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
                 +LGHE+AG V +V   V  ++ GD V    Q  C  C+ C +G+ N C +V   
Sbjct: 69  IVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVD-- 126

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL- 174
                                  F+ T        +Y     V   KI      +   + 
Sbjct: 127 -----------------------FLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGAML 162

Query: 175 --LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232
             L   +      +   A V  G  V + G G +GL     AKAAGA  ++  DID  + 
Sbjct: 163 EPLSVAL----AGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL 217

Query: 233 DRAKNFGVTEFVNPKDHDKP--IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGW 289
             AK        +  +        + +V+   G     + EC G  S + AA+     G 
Sbjct: 218 KFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG- 276

Query: 290 GTSVIVGVAASGQEISTRPFQLVTGR 315
           G   ++GV  +  +I   PF   + R
Sbjct: 277 GKVFVIGVGKNEIQI---PFMRASVR 299

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  181 bits (463), Expect = 6e-55
 Identities = 86/314 (27%), Positives = 130/314 (41%), Gaps = 42/314 (13%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCIL 67
             KAAV      PL I++V V  P  G+V++KI  + +CHTD +   G  P     P I 
Sbjct: 2   MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V +VG GV+ V+ GD V +P   + C  C+ C  G   LC K +         
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTG------ 115

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGA 185
                 +S+NG           + +Y V     V  +  +    ++  + C GV      
Sbjct: 116 ------YSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-----T 154

Query: 186 VWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           V+         PG  V + G+G +G +AV + A+A G  RV  +DID  K + A+  G  
Sbjct: 155 VYKGLKVTDTRPGQWVVISGIGGLGHVAV-QYARAMGL-RVAAVDIDDAKLNLARRLGAE 212

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
             VN +D D P   +  ++  GG         +      A+    +G GT  + G+    
Sbjct: 213 VAVNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD 268

Query: 302 QEISTRPFQLVTGR 315
                  F +V   
Sbjct: 269 FGTP--IFDVVLKG 280

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  182 bits (464), Expect = 7e-55
 Identities = 73/299 (24%), Positives = 113/299 (37%), Gaps = 29/299 (9%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           K        K +   + +   P   +  ++ L  A C +D +T            ILGHE
Sbjct: 2   KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
           A G V  VG  V + +PGD V+ P            + G     G   G        N  
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVPAITP-DWRTSEVQRGYHQHSG---GMLAGWKFSN-- 114

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
                 +G           F ++  V+  D+++A +  + PL+   ++   + TG     
Sbjct: 115 ----VKDG----------VFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAE 160

Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
             A ++ G  V V G+G VGL    GA   GA R+  +       D A  +G T+ +N K
Sbjct: 161 L-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219

Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           + D  ++Q+L   TDG GVD      G+V     A++    G      V     G  I 
Sbjct: 220 NGD-IVEQIL-KATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNID 275

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  181 bits (463), Expect = 7e-55
 Identities = 86/325 (26%), Positives = 138/325 (42%), Gaps = 41/325 (12%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
           T K  + +E +  L  +D+ V  P+A E+ I + ++ +CHTD + W G  P  +  P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE AG+V  +GE V   + GD+  I      C  C++C+ G  + C     +       
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG------ 118

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT--GL 183
                 ++ +G          +F QY     V  A I     L +V  + C G+     L
Sbjct: 119 ------YTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL 162

Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGL---AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
                +A +  G  VA+ G    GL   AV + AKA G  RV+GID    K +  ++ G 
Sbjct: 163 ----KSANLMAGHWVAISGAAG-GLGSLAV-QYAKAMGY-RVLGIDGGEGKEELFRSIGG 215

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300
             F++       +  VL   TDGG         + + + A+        GT+V+VG+ A 
Sbjct: 216 EVFIDFTKEKDIVGAVL-KATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA- 272

Query: 301 GQEISTRPFQLVTGRV-WKGTAFGG 324
           G +  +  F  V   +   G+  G 
Sbjct: 273 GAKCCSDVFNQVVKSISIVGSYVGN 297

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  180 bits (460), Expect = 2e-54
 Identities = 90/313 (28%), Positives = 135/313 (43%), Gaps = 42/313 (13%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH 69
           KAAV  +  +PL I++V+      GEV ++I    +CHTD +   G  P     P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 70  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           E  GIVE VG GVT ++ GD V IP   + C  C +C SG+  LC   + A         
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAG-------- 113

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVW 187
               +S++G           +++Y       V KI      ++   + C GV       +
Sbjct: 114 ----YSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV-----TTY 154

Query: 188 N---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
                   +PG  VA++G+G +G +AV + AKA G   V+ +DI  +K + AK  G    
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAV-QYAKAMGL-NVVAVDIGDEKLELAKELGADLV 212

Query: 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 303
           VNP   D       +    GGV  +     +    ++A     +G G  V+VG+      
Sbjct: 213 VNPLKEDAAKF---MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMP 268

Query: 304 ISTRPFQLVTGRV 316
           I    F  V   +
Sbjct: 269 IP--IFDTVLNGI 279

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  178 bits (453), Expect = 3e-53
 Identities = 83/318 (26%), Positives = 130/318 (40%), Gaps = 49/318 (15%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GK--DPEGLFPCIL 67
            +AV       L +E   +  P+  EV +++ +  +C +D + +  G+  D     P ++
Sbjct: 6   LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHEA+G V  VG+ V  ++ GD V       CR C+FCK GK NLC  +           
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLT---------- 114

Query: 128 DRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
                          F  T       ++Y V       K+     L++  L   L  GV 
Sbjct: 115 ---------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV- 158

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG- 239
               A    A V+ G+ V V G G +GL     AKA GA  V+     P++ + AKN G 
Sbjct: 159 ---HAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGA 213

Query: 240 -VTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
            VT  V+P   +   I + +        + + +C GN   +   +     G GT ++VG+
Sbjct: 214 DVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGM 272

Query: 298 AASGQEISTRPFQLVTGR 315
              G ++ T P      R
Sbjct: 273 ---GSQMVTVPLVNACAR 287

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  170 bits (432), Expect = 3e-50
 Identities = 52/306 (16%), Positives = 99/306 (32%), Gaps = 42/306 (13%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCIL 67
           KA          V+ +     P++GE  ++ L   +C TD    +G     PEG    +L
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           GHEA G+V  V    TE++ GD V             ++ +  + ++           V 
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGV-PT 181
                     +G            S++    +  + +I P++  +   L   +       
Sbjct: 120 A---------HG----------YMSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKAL 159

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA--AGASRVIGI---DIDPKKFDRAK 236
                  +A     S   V G G++GL      K    G   +  +   D      D  +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219

Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296
               T   + +   + +  V        +D+ +E  G       +++      G   ++G
Sbjct: 220 ELDATYVDSRQTPVEDVPDVY-----EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLG 273

Query: 297 VAASGQ 302
           V +   
Sbjct: 274 VPSDWA 279

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  166 bits (423), Expect = 7e-49
 Identities = 55/309 (17%), Positives = 103/309 (33%), Gaps = 45/309 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFP 64
           KA +   PN  + ++DV        G+++I+ ++  +C  D    +GK      P+G   
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
            +LGHEA G+VE    G      GD V+P  +  C  C+ C  G+ + C        AG+
Sbjct: 62  LVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF-GEAGI 117

Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPT- 181
              D                G     ++       + KI        +    L     + 
Sbjct: 118 HKMD----------------GF--MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159

Query: 182 --------GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
                    +              V V G G +G+      +  G    +    +P + +
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219

Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG-NVSVMRAALECCHKGWGTS 292
           +          N  +      ++   +  G  D   +  G +V+++   +    +  G  
Sbjct: 220 QTVIEETK--TNYYNSSNGYDKLKDSV--GKFDVIIDATGADVNILGNVIPLLGRN-GVL 274

Query: 293 VIVGVAASG 301
            + G + SG
Sbjct: 275 GLFGFSTSG 283

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  145 bits (369), Expect = 2e-40
 Identities = 67/316 (21%), Positives = 119/316 (37%), Gaps = 51/316 (16%)

Query: 13  AVAWEPNKPLVIEDVQ----VAP--PQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFP 64
           +V +   + L +E V               V +K++ T +C +D + + G+    +G   
Sbjct: 5   SVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGH-- 62

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGA 122
            +LGHE  G V   G  V  +  GD V   +   C  C+ CK  ++++C    V      
Sbjct: 63  -VLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL 121

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKI----DPQAPLDKVCLLG 176
           G             G  +  + G    ++Y +V   D  + K          +  + L+ 
Sbjct: 122 G-----------AFGFDLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLIS 168

Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
             +PTG     + A V+PGS V + G G VG   A GA+  GA+ VI  D +P++     
Sbjct: 169 DILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227

Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG--------------NVSVMRAA 281
           + G    ++ ++      Q+   +     VD   + +G                  + + 
Sbjct: 228 DAGFET-IDLRNSAPLRDQID-QILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285

Query: 282 LECCHKGWGTSVIVGV 297
            +    G G   I G+
Sbjct: 286 FDVVRAG-GAIGIPGI 300

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  142 bits (361), Expect = 2e-39
 Identities = 77/318 (24%), Positives = 119/318 (37%), Gaps = 54/318 (16%)

Query: 13  AVAWEPNKPLVIEDVQVA-------PPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLF 63
            V +  +  + ++ +                V +K++ T +C +D +   G+     GL 
Sbjct: 5   GVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGL- 63

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
             +LGHE  G V   G  V  +Q GD V   +   C  C+ CK   T +C  V  A   G
Sbjct: 64  --VLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 121

Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTVVH--DVSVAKI----DPQAPLDKVCLL 175
                        G   Y  MG  T  Q  Y +V   D ++ K+         +  +  L
Sbjct: 122 -----------AYG---YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCL 167

Query: 176 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
              +PTG       A V PGS V V G G VGLA A  A+  GA+ VI  D++P +   A
Sbjct: 168 SDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226

Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---------------NVSVMR 279
           K  G     +        +Q+   L     VD + + +G                 +V+ 
Sbjct: 227 KAQGFEI-ADLSLDTPLHEQIA-ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLN 284

Query: 280 AALECCHKGWGTSVIVGV 297
           + ++      G   I G+
Sbjct: 285 SLMQVTRVA-GKIGIPGL 301

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  123 bits (312), Expect = 1e-32
 Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 32/257 (12%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
            +   +  KA  A+   +PL   D+    P   +V+I+I +  +CH+D +    +    +
Sbjct: 16  YKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTV 75

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
           +PC+ GHE  G V +VG+ V +  PGD V + C    C+ C+ C+ G  N C        
Sbjct: 76  YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC-------- 127

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKI-DPQAPLDKVCLLGC 177
                       + N           T   +SQ  VVH+  V +I  PQ  L  V  L C
Sbjct: 128 -------DHMTGTYNSP--TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC 178

Query: 178 GVPTGLGAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFD 233
              T     ++     +  PG  V V G+G +G + + + A A GA  V+       K +
Sbjct: 179 AGIT----TYSPLRHWQAGPGKKVGVVGIGGLGHMGI-KLAHAMGA-HVVAFTTSEAKRE 232

Query: 234 RAKNFGVTEFVNPKDHD 250
            AK  G  E VN ++ D
Sbjct: 233 AAKALGADEVVNSRNAD 249

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  119 bits (300), Expect = 5e-31
 Identities = 81/312 (25%), Positives = 123/312 (39%), Gaps = 37/312 (11%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
           +A V      P  L + D+ V  P   EVR+++   AL H D +   G     L  P +L
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVM 125
           G + +G+V++VG GV    PGD V+      C  C+ C +G+ NLC   ++ G    G  
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHG-- 119

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
                                 T+++Y V+ + ++A        ++   +     T    
Sbjct: 120 ----------------------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM 157

Query: 186 VWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
           V +   V PG  V V      V +A  + AK  GA RVI       K  RAK  G  E V
Sbjct: 158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETV 216

Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 303
           N    D    + +  LT G G D   +  G +      ++    G G   I G A+SG E
Sbjct: 217 NYTHPD--WPKEVRRLTGGKGADKVVDHTGALYFEG-VIKATANG-GRIAIAG-ASSGYE 271

Query: 304 ISTRPFQLVTGR 315
            +     +   +
Sbjct: 272 GTLPFAHVFYRQ 283

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  115 bits (290), Expect = 1e-29
 Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 30/249 (12%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +  K    +  ++     D         +V I IL+  +CH+D ++   +  EG++P I 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE AGI++ VG+GV + + GD V + C+   C+ CK CK  +   C             
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFC------------- 109

Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 183
              K  F+ +    +H         +S   VV +  V  +D  APL+KV  L C   T  
Sbjct: 110 --TKVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGIT-- 164

Query: 184 GAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
              ++    +KV  G+ V V G G +G +AV + A A GA  V     +  K   A + G
Sbjct: 165 --TYSPLKFSKVTKGTKVGVAGFGGLGSMAV-KYAVAMGA-EVSVFARNEHKKQDALSMG 220

Query: 240 VTEFVNPKD 248
           V  F     
Sbjct: 221 VKHFYTDPK 229

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  115 bits (290), Expect = 1e-29
 Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 42/257 (16%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +      A + +  L   +         +VR K+L+  +CH+D ++        ++P + 
Sbjct: 15  VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVP 74

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V  VG  V +V  GD V + C    C  C+ C +   N C             
Sbjct: 75  GHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYC------------- 121

Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT- 181
              K   +       +  GT T   +S + V ++  + +     PLD    L C G+   
Sbjct: 122 --PKMILTYASI---YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVY 176

Query: 182 ------GLGAVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDR 234
                 GL         EPG  + + GLG +G +AV + AKA G+ +V  I   P K + 
Sbjct: 177 SPLKYFGLD--------EPGKHIGIVGLGGLGHVAV-KFAKAFGS-KVTVISTSPSKKEE 226

Query: 235 A-KNFGVTEFVNPKDHD 250
           A KNFG   F+  +D +
Sbjct: 227 ALKNFGADSFLVSRDQE 243

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  113 bits (286), Expect = 5e-29
 Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 33/297 (11%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGE 80
           L + +  V      ++ ++ L  +L + D           L FP +   + +G+VE+VG+
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100

Query: 81  GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
            VT  +PGD VI  +     +     +G+T    +  G    GV                
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPA-YETLGGAHPGV---------------- 143

Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
                    S+Y V+ +             +   L C   T   A+     +  G  V V
Sbjct: 144 --------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV 195

Query: 201 FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
            G G V L   + AKA GA  VI      +K DRA   G    +N  + D    + +  L
Sbjct: 196 QGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYAL 252

Query: 261 TDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 316
           T   G D+  E  G  + +  +L+      G   ++GV   G E+S     L+    
Sbjct: 253 TGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGV-LEGFEVSGPVGPLLLKSP 306

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  114 bits (287), Expect = 9e-29
 Identities = 50/320 (15%), Positives = 103/320 (32%), Gaps = 62/320 (19%)

Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG--------------- 61
           +  K L + +V +      EV + ++ +++ +   ++   +                   
Sbjct: 45  DVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT 104

Query: 62  ---LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
                  +LG + +G+V   G GV   +PGDHVI  + A   E +    G   L  + R 
Sbjct: 105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRA 163

Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
                             G            ++Y VV    +         ++  +    
Sbjct: 164 WGFETN-----------FG----------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLC 202

Query: 179 VPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
             T    +     A+++ G IV ++G  G +G    +  K  G    + +    +K    
Sbjct: 203 AGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAV 261

Query: 236 KNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFECIGNVSVMR 279
           +  G    +N  +                  + + +++V+      D  FE  G      
Sbjct: 262 RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFG 320

Query: 280 AALECCHKGWGTSVIVGVAA 299
            ++    +G GT V  G ++
Sbjct: 321 LSVIVARRG-GTVVTCGSSS 339

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  111 bits (281), Expect = 2e-28
 Identities = 65/262 (24%), Positives = 96/262 (36%), Gaps = 38/262 (14%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           M             A +P+  L      +      +V I+I+   +CHTD +        
Sbjct: 1   MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60

Query: 61  GLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGA 119
             +P + GHE  G V  VG  V++   GD V + C    C  C  C+      C      
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYC------ 114

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLG 176
                     K  +S N     +  G  T   F++ TVVH   V KI     +++   L 
Sbjct: 115 ---------PKKIWSYNDV---YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLL 162

Query: 177 CGVPTGLGAV------WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDP 229
           C   T    V      +   +  PG    + GLG VG + V + AKA G   V  I    
Sbjct: 163 CAGVT----VYSPLSHFGLKQ--PGLRGGILGLGGVGHMGV-KIAKAMGH-HVTVISSSN 214

Query: 230 KKFDRA-KNFGVTEFVNPKDHD 250
           KK + A ++ G  ++V   D  
Sbjct: 215 KKREEALQDLGADDYVIGSDQA 236

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  108 bits (273), Expect = 3e-27
 Identities = 65/318 (20%), Positives = 110/318 (34%), Gaps = 69/318 (21%)

Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAG 73
           +P K + ++++++A  +  +VR+K+L   +  +D     G     PE   P + G+E   
Sbjct: 37  DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE--LPAVGGNEGVA 94

Query: 74  IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 133
            V +VG  VT ++PGD VIP                                        
Sbjct: 95  QVVAVGSNVTGLKPGDWVIPA--------------------------------------- 115

Query: 134 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 193
                      G  T+    V  + ++ ++    PL     LG    T    + +  +++
Sbjct: 116 ---------NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQ 166

Query: 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI----DIDPKKFDRAKNFGVTEFVNPKD 248
           PG  V        VG AV + A A G  R I +        K  DR K+ G    +  ++
Sbjct: 167 PGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 225

Query: 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR 307
             +P  ++     D      +  C+G        L    +G GT V  G   + Q +   
Sbjct: 226 LRRP--EMKNFFKDMPQPRLALNCVGG-KSSTELLRQLARG-GTMVTYG-GMAKQPVVAS 280

Query: 308 PFQLVTGRVWKGTAFGGF 325
              L+     K     GF
Sbjct: 281 VSLLIF----KDLKLRGF 294

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  106 bits (266), Expect = 8e-26
 Identities = 53/338 (15%), Positives = 100/338 (29%), Gaps = 65/338 (19%)

Query: 2   STEGQVITCKAAVAWE---PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK- 57
           +         A +      P K + ++DV V     GE  + ++ +++ +   +T   + 
Sbjct: 35  TVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEP 94

Query: 58  -----------------DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100
                                L   ++G + AG+V   G GV   Q GD V+    +   
Sbjct: 95  LSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVEL 154

Query: 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160
           E          +    +   G                            ++  +V    +
Sbjct: 155 ESSDG--HNDTMLDPEQRIWGFE--------------------TNFGGLAEIALVKSNQL 192

Query: 161 AKIDPQAPLDKVCLLGCGVPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA 217
                    ++    G    T    +   N A ++ G  V ++G  G +G    + A A 
Sbjct: 193 MPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG 252

Query: 218 GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV---------------DLTD 262
           GA   I +   P+K +  +  G    ++         +                  +LT 
Sbjct: 253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG 311

Query: 263 G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
           G  +D  FE  G      A++    KG GT       +
Sbjct: 312 GEDIDIVFEHPGR-ETFGASVFVTRKG-GTITTCASTS 347

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  103 bits (258), Expect = 4e-25
 Identities = 55/257 (21%), Positives = 89/257 (34%), Gaps = 34/257 (13%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
           MS   +     A  + E  K          P    ++ IKI    +C +D +  +G    
Sbjct: 1   MSYPEKF-EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN 59

Query: 61  GLFPCILGHEAAGIVESVGEGV-TEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRG 118
              P ++GHE  G V  +G    + ++ G  V +      C EC  CK+     C     
Sbjct: 60  MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC----- 114

Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLL 175
                      K   + +     +  G  +   ++ Y  VH+  V  I    P      L
Sbjct: 115 ----------TKFVTTYSQP---YEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPL 161

Query: 176 GCGVPTGLGAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKK 231
            CG  T    V++        PG  V + GLG +G +     +KA GA     I    +K
Sbjct: 162 LCGGLT----VYSPLVRNGCGPGKKVGIVGLGGIGSMGT-LISKAMGA-ETYVISRSSRK 215

Query: 232 FDRAKNFGVTEFVNPKD 248
            + A   G   ++   +
Sbjct: 216 REDAMKMGADHYIATLE 232

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  101 bits (255), Expect = 7e-25
 Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 60/314 (19%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DP 59
           MS  G++I         P   L +E   + P +  EV +++L   +  +D    +G    
Sbjct: 1   MSLHGKLIQFHKF--GNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH 58

Query: 60  EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
               P I G+E  GIVE+VG  V+    G  V+P                          
Sbjct: 59  RIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP-------------------------L 93

Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
            G G                        T+ +Y       V  I           +    
Sbjct: 94  RGEG------------------------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINP 129

Query: 180 PTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
            T       T  ++   ++ V      +G   A+ ++     R+I +  + K  +     
Sbjct: 130 LTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL 188

Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
           G    ++       + + +++LT+G G D + + IG                G  + +G 
Sbjct: 189 GAAYVIDTSTAP--LYETVMELTNGIGADAAIDSIGGPDGNE-LAFSLRPN-GHFLTIG- 243

Query: 298 AASGQEISTRPFQL 311
             SG +++      
Sbjct: 244 LLSGIQVNWAEIVT 257

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  101 bits (253), Expect = 2e-24
 Identities = 54/298 (18%), Positives = 85/298 (28%), Gaps = 61/298 (20%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
            A    + ++  V            +V +++   A+  +D    S +         LG +
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
            AG V +VG  VT +Q GD V                      G                
Sbjct: 70  YAGTVVAVGSDVTHIQVGDRV---------------------YGAQNEMCP--------- 99

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT--------- 181
                             FSQYTV      AKI      ++   L  G+ T         
Sbjct: 100 -----------RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLG 148

Query: 182 -GLGAVWNTAKVEPGSIVAVF---GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
             L +            V V    G         +  + +G    I     P  FD AK+
Sbjct: 149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKS 206

Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295
            G  E  + +  +  + Q +   T   + Y+ +CI NV           +  G  V +
Sbjct: 207 RGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 94.2 bits (235), Expect = 4e-22
 Identities = 60/287 (20%), Positives = 98/287 (34%), Gaps = 66/287 (22%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           L   +   A P   E++++     +   D Y  SG  P    P  LG EAAGIV  VG G
Sbjct: 16  LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 75

Query: 82  VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
           V  ++ GD V                                                +Y
Sbjct: 76  VKHIKAGDRV------------------------------------------------VY 87

Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLGA---VWNTAKVEPGS 196
                  +S    +     A +      ++     L      GL     +  T +++P  
Sbjct: 88  AQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL-----KGLTVYYLLRKTYEIKPDE 142

Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
                   G VGL   + AKA GA ++IG     +K   A   G  + +N ++ D   ++
Sbjct: 143 QFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREEDLV-ER 200

Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           +  ++T G  V   ++ +G       +L+C  +  G  V  G  +SG
Sbjct: 201 LK-EITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFG-NSSG 243

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 92.6 bits (231), Expect = 1e-21
 Identities = 68/287 (23%), Positives = 103/287 (35%), Gaps = 66/287 (22%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           L   D +   P    V ++     L   D Y  SG  P    P  LG E AG+VE+VG+ 
Sbjct: 16  LEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDE 75

Query: 82  VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
           VT  + GD V                                                 Y
Sbjct: 76  VTRFKVGDRV------------------------------------------------AY 87

Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLGA---VWNTAKVEPGS 196
                  +S+  V+ + ++ K+      ++    +L      GL     +  T +V+PG 
Sbjct: 88  GTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALML-----KGLTVQYLLRQTYQVKPGE 142

Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
           I+      G VG    + AKA GA ++IG    P+K   AK  G  E ++    D   ++
Sbjct: 143 IILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVA-KR 200

Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           VL +LTDG      ++ +G       +L+      G  V  G  ASG
Sbjct: 201 VL-ELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFG-NASG 243

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 90.7 bits (226), Expect = 6e-21
 Identities = 72/287 (25%), Positives = 106/287 (36%), Gaps = 65/287 (22%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           +  ED  V      E+ IK  +T + + ++Y   G  P    P +LG EA+G V + G+G
Sbjct: 23  IKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKG 81

Query: 82  VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
           VT  + GD V                                                  
Sbjct: 82  VTNFEVGDQVA------------------------------------------------- 92

Query: 142 HFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT-GLGA---VWNTAKVEPGS 196
            ++  STF+QY+ +     V K+ P+   D+   L        L A         V+ G 
Sbjct: 93  -YISNSTFAQYSKISSQGPVMKL-PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGD 150

Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
            V +F   G VGL + +  K  GA   I +    +K   AK +G    +N    D   +Q
Sbjct: 151 YVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDIL-RQ 208

Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
           VL   T+G GVD SF+ +G       +L    +  G  V  G  ASG
Sbjct: 209 VL-KFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFG-NASG 251

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 90.9 bits (226), Expect = 9e-21
 Identities = 45/335 (13%), Positives = 91/335 (27%), Gaps = 88/335 (26%)

Query: 7   VITCKAAVAWE---PNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK---- 57
           +IT +A +  +   P   L  +  ++        EV +K L + +  +D     G     
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 58  ------DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 111
                           G+E    V  VG  V+ ++ GD VIP                  
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPS----------------- 103

Query: 112 LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA---- 167
                                           +   T+  + + +D    K+   A    
Sbjct: 104 -------------------------------HVNFGTWRTHALGNDDDFIKLPNPAQSKA 132

Query: 168 -------PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAG 218
                   +++   +     T    + +  K+ PG    +   G   VG   ++  K   
Sbjct: 133 NGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN 192

Query: 219 ASRVIGI----DIDPKKFDRAKNFGVTEFVNPKDHD-KPIQQVLVDLTD---GGVDYSFE 270
               I +        +     K  G T+ +    ++ +     + +      G    +  
Sbjct: 193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN 251

Query: 271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS 305
           C+G            +   G  +  G   S Q ++
Sbjct: 252 CVGG-KSSTGIARKLNNN-GLMLTYG-GMSFQPVT 283

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 87.7 bits (218), Expect = 1e-19
 Identities = 67/290 (23%), Positives = 103/290 (35%), Gaps = 67/290 (23%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLFPCILGHEAAGIVESV 78
            V E+V+V  P  G+VR++     +   D Y  +G       G  P ++G EAA +VE V
Sbjct: 16  FVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEV 75

Query: 79  GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
           G GVT+   G+ V                                               
Sbjct: 76  GPGVTDFTVGERV----------------------------------------------- 88

Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKI-----DPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 193
                     +SQ  +     + K+          L  + L G    T    +  T KV+
Sbjct: 89  -CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGM---TAQYLLHQTHKVK 144

Query: 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
           PG  V +    G +G  +   A+  GA  VIG     +K + A+  G    +N    D  
Sbjct: 145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQDFA 203

Query: 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
            + V  ++T G GVD  ++ IG    ++ +L+C     G     G  ASG
Sbjct: 204 -EVVR-EITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYG-HASG 248

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 62/309 (20%), Positives = 100/309 (32%), Gaps = 67/309 (21%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
           KA  A   + P  LV  DV+        V + +    +C  D     G+        P +
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFV 81

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
            G E AG+V S  EG + ++PGD V+                              G   
Sbjct: 82  PGIETAGVVRSAPEG-SGIKPGDRVM-------------------------AFNFIG--- 112

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                                 +++   V   ++    PQ    +   L     T   A 
Sbjct: 113 ---------------------GYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAY 151

Query: 187 WNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
               ++  G  V V G  G +G A  + AK  GA +VI +       +  K+ G    + 
Sbjct: 152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLP 210

Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQE 303
               ++   + + + T G GVD   + IG       A+        G  ++VG  A+G  
Sbjct: 211 ---LEEGWAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTL--ASEGRLLVVG-FAAG-G 262

Query: 304 ISTRPFQLV 312
           I T     +
Sbjct: 263 IPTIKVNRL 271

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 81.9 bits (203), Expect = 9e-18
 Identities = 40/316 (12%), Positives = 76/316 (24%), Gaps = 65/316 (20%)

Query: 5   GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGL 62
           G   T   +        L    + V  P   +V IK+   ++  +D     G+   P   
Sbjct: 20  GYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVK 79

Query: 63  FPCILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
                G E  G + + G+    +   G  V                          G + 
Sbjct: 80  -GRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF----------------------ATGLSN 116

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G                        ++++Y V    +   +      +     G  +  
Sbjct: 117 WG------------------------SWAEYAVAEAAACIPLLDTVRDED----GAAMIV 148

Query: 182 GLGAVWN---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
                       K E      +      +   +   AK  G  R I      ++    K+
Sbjct: 149 NPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD 207

Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296
            G    +N K  D   +  L ++          + +    +  A      K     +I G
Sbjct: 208 IGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYG 263

Query: 297 VAASGQEISTRPFQLV 312
                     R    +
Sbjct: 264 -RLDPDATVIREPGQL 278

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 54/322 (16%), Positives = 93/322 (28%), Gaps = 82/322 (25%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----EGLF 63
           KA    +   P  L + D      +  ++ IK+   +L   D  T +G        +   
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
           P  LG++ +G V  +G  V  V  GD V                      G         
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------MGIAGFPDHPC 106

Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGC 177
                                    +++Y      ++ +         QA          
Sbjct: 107 ------------------------CYAEYVCASPDTIIQK-LEKLSFLQA---------A 132

Query: 178 GVPTGLGAVWN---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
            +PT           A+V+ G +V +    G VG    + AK  G   VI      +   
Sbjct: 133 SLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHA 190

Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 293
             K  G  + +N  + D       +      VD   + +G   V   +++C  +  G  V
Sbjct: 191 FLKALGAEQCINYHEED------FLLAISTPVDAVIDLVGG-DVGIQSIDCLKET-GCIV 242

Query: 294 IVGVAASGQEISTRPFQLVTGR 315
            V    +G+ I     +     
Sbjct: 243 SVPTITAGRVIEVAKQKHRRAF 264

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 79.5 bits (197), Expect = 6e-17
 Identities = 56/290 (19%), Positives = 101/290 (34%), Gaps = 67/290 (23%)

Query: 23  VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGE 80
           +  D+ V  P+  +V IK+    +   + Y  SG       L P   G + AG++E+VG+
Sbjct: 46  LRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLL-PYTPGSDVAGVIEAVGD 104

Query: 81  GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
             +  + GD V                             G                   
Sbjct: 105 NASAFKKGDRVF--------------------TSSTIS--GG------------------ 124

Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW----NTAKVEPGS 196
                   +++Y +  D +V K+  +    +    G  +       +    ++A V+ G 
Sbjct: 125 --------YAEYALAADHTVYKLPEKLDFKQ----GAAIGIPYFTAYRALIHSACVKAGE 172

Query: 197 IVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
            V V G  G VGLA  + A+A G  +++G     +        G  E  N ++ +     
Sbjct: 173 SVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YID 229

Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304
            +       G+D   E + NV++ +  L     G G  ++VG +    EI
Sbjct: 230 KIKKYVGEKGIDIIIEMLANVNLSK-DLSLLSHG-GRVIVVG-SRGTIEI 276

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 79.6 bits (197), Expect = 8e-17
 Identities = 52/319 (16%), Positives = 92/319 (28%), Gaps = 66/319 (20%)

Query: 1   MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
             +  Q +              +  D  V  P  G++ ++  F  +  +D    +G+   
Sbjct: 20  FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP 79

Query: 61  G-LFPCILGHEAAGIVESVGEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
               P  +G E  G V ++G   +     G  V                           
Sbjct: 80  SVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA-------------------------- 113

Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
                                   +M   +F++YTVV       +    P      L   
Sbjct: 114 ------------------------YMAPGSFAEYTVVPASIATPVPSVKPE----YLTLL 145

Query: 179 VP--TGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
           V   T   ++     +  G  V V    G  G    + +K A    VIG     +K    
Sbjct: 146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL 204

Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295
           K+ G    +N K     +  VL      GVD  +E +G  ++   A++      G  +++
Sbjct: 205 KSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVI 260

Query: 296 GVAASGQEISTRPFQLVTG 314
           G  +     +      V  
Sbjct: 261 GFIS--GYQTPTGLSPVKA 277

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 59/280 (21%), Positives = 91/280 (32%), Gaps = 80/280 (28%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILG 68
            AAV  E N P V+  +    P  G+V ++I  +     DA   +G     +   P ILG
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
            + AG V +VG  V   + GD V                      G   G  G       
Sbjct: 69  MDLAGTVVAVGPEVDSFRVGDAV---------------------FGLTGGVGGLQ----- 102

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGCGVPTG 182
                              T +Q+  V    +A   P      QA           +P  
Sbjct: 103 ------------------GTHAQFAAVDARLLASK-PAALTMRQA---------SVLPLV 134

Query: 183 LGAVW----NTAKVEPGSIVAVF----GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
               W    + A+V+ G  V +     G+G V + +   A A GA RV          + 
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI---ALARGA-RVFATA-RGSDLEY 189

Query: 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
            ++ G T     ++ +        + T G G D  ++ +G
Sbjct: 190 VRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLG 225

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 57/321 (17%), Positives = 96/321 (29%), Gaps = 71/321 (22%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
           +A V         L +    +  PQ GE++I++    L   D     G   +P    P +
Sbjct: 5   RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKT-PLV 63

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
            G E +GIVE++G+ V   + GD V                        V     A    
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRV---------------------MAFVNY--NA---- 96

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                                 +++        V KI       +        P      
Sbjct: 97  ----------------------WAEVVCTPVEFVYKIPDDMSFSE----AAAFPMNFVTA 130

Query: 187 WN----TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           +      A +  G  V V    G VG AVA+         V G     K  +  K+    
Sbjct: 131 YVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH-EAIKDSV-- 187

Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 301
             +  ++ D    Q +  ++  GVD   +C+   +  +  L       GT ++ G  ++ 
Sbjct: 188 THLFDRNAD--YVQEVKRISAEGVDIVLDCLCGDNTGK-GLSLLKPL-GTYILYGS-SNM 242

Query: 302 QEISTRPFQLVTGRVWKGTAF 322
               T+ F       W+    
Sbjct: 243 VTGETKSFFSFAKSWWQVEKV 263

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 33/282 (11%), Positives = 61/282 (21%), Gaps = 95/282 (33%)

Query: 11  KAAVAWE---PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +    W        + +  V +    A ++ ++     +   D               + 
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           G + AG++  VG  V     G  V                                    
Sbjct: 63  GVDGAGVIVKVGAKVDSKMLGRRVA----------------------------YHT---- 90

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQA---PLDKVCLLGCGV 179
                   +G          +F+++TV++   V  +       +A   P           
Sbjct: 91  ----SLKRHG----------SFAEFTVLNTDRVMTLPDNLSFERAAALPC---------- 126

Query: 180 PTGLGAVW---NTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASRVIGIDIDPKK 231
              L A W       +     V + G G V      +    G      S           
Sbjct: 127 -PLLTA-WQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSA-------SLS 177

Query: 232 FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
              A   GV            + Q             F+ + 
Sbjct: 178 QALAAKRGVRHLY---REPSQVTQ--------KYFAIFDAVN 208

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 71.5 bits (175), Expect = 5e-14
 Identities = 41/301 (13%), Positives = 72/301 (23%), Gaps = 90/301 (29%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------------------KDPEG 61
           L ++ +    P   EV I+I  + L  +D     G                    + PEG
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 62  LF---------PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112
                         +G+E AG+V   G            +                    
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------ 121

Query: 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172
                                          +G + +SQY  +       +   A     
Sbjct: 122 -------------------------------IGGAMYSQYRCIPADQCLVLPEGATPAD- 149

Query: 173 CLLGCGVPTGLGAVWN---TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228
              G               T ++E  S +        +G  + +     G  +++ I   
Sbjct: 150 ---GASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205

Query: 229 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
            ++ D  K  G     N         Q L +     G   +F+  G   +    L C   
Sbjct: 206 QEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEA 263

Query: 288 G 288
            
Sbjct: 264 A 264

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 53/273 (19%), Positives = 83/273 (30%), Gaps = 68/273 (24%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
           +         P  +VI    +     GEV ++     +   D     G    P+     I
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDA-SPI 88

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           LG E +G +  VG GV+    GD V                     CG   G  GA    
Sbjct: 89  LGLELSGEIVGVGPGVSGYAVGDKV---------------------CGLANG--GA---- 121

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 182
                                 +++Y ++    +          K       +P    T 
Sbjct: 122 ----------------------YAEYCLLPAGQILPFPKGYDAVK----AAALPETFFTV 155

Query: 183 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
              ++  A +  G  V + G GT  +G    + A+A GA  V        K +  +  G 
Sbjct: 156 WANLFQMAGLTEGESVLIHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA 213

Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
              +N +  D     V+   T  GVD   + IG
Sbjct: 214 KRGINYRSED--FAAVIKAETGQGVDIILDMIG 244

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 19/75 (25%), Positives = 37/75 (49%)

Query: 17  EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVE 76
             +  L+  ++    P   ++ +++   ++   D        P+G    ++G++AAGIV 
Sbjct: 35  TDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVS 94

Query: 77  SVGEGVTEVQPGDHV 91
           +VG  VT  +PGD V
Sbjct: 95  AVGPDVTLFRPGDEV 109

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 60/275 (21%), Positives = 88/275 (32%), Gaps = 70/275 (25%)

Query: 11  KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
            A    +P  P  L +++V    P  GEV +K+  +AL   D     G+   P G    I
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA-SNI 82

Query: 67  LGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
           LG EA+G V  +G G     + GD                          + G  G    
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTA---------------------MALLPG--GG--- 116

Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 181
                                   +QY  V +  +  I     L +       +P    T
Sbjct: 117 -----------------------QAQYVTVPEGLLMPIPEGLTLTQ----AAAIPEAWLT 149

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
               +     V+ G  V +   G   VG A  +  + AGA   +      KK   A+  G
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLG 207

Query: 240 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
                N K  D    +  +  T G GV+   +CIG
Sbjct: 208 AAAGFNYKKED--FSEATLKFTKGAGVNLILDCIG 240

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 60.2 bits (147), Expect = 2e-10
 Identities = 50/296 (16%), Positives = 77/296 (26%), Gaps = 83/296 (28%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 68
           KA V      PL + D+     + GEV +++    L   D     G         P I G
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-PFIPG 60

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
            E  G+VE           G                                  G     
Sbjct: 61  MEVVGVVE-----------GRRYA-------------------------ALVPQG----- 79

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
                                ++   V   ++  +      ++        P      + 
Sbjct: 80  -------------------GLAERVAVPKGALLPLPEGLSPEE----AAAFPVSFLTAYL 116

Query: 189 ---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
               A+  PG  V V    G +G A  + A+A G  RV+     P+K       G  E  
Sbjct: 117 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAA 175

Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
              +  +             G+D   E  G    +  +L     G G  V +G A 
Sbjct: 176 TYAEVPE-------RAKAWGGLDLVLEVRG--KEVEESLGLLAHG-GRLVYIGAAE 221

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 8  ITCKAAVAWEP-----NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
          ++ KA    +P            ++ +  P+  E+ +KI   ++   D         +  
Sbjct: 1  MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK-- 58

Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHV 91
           P +LG +A G+VESVG  VT    GD V
Sbjct: 59 APRVLGFDAIGVVESVGNEVTMFNQGDIV 87

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 52/321 (16%), Positives = 89/321 (27%), Gaps = 96/321 (29%)

Query: 11  KAAVAWEPNKPLVI---EDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---- 62
            A V  +  K  V+   +++ +       EV +K+   ++   D    SG     L    
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 63  -----------FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 111
                      FP  LG + +G+V   G  V   +PGD V                    
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAV---------------- 126

Query: 112 LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQ 166
                      G                        T S++ VV    V+         Q
Sbjct: 127 ------PPWKQG------------------------TLSEFVVVSGNEVSHKPKSLTHTQ 156

Query: 167 APLDKVCLLGCGVP----TGLGAVWNTAKVEPGSIVA--VF---GLGTVGLAVAEGAKAA 217
           A           +P    T   A+     +   +     V      G VG    +  KA 
Sbjct: 157 A---------ASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW 207

Query: 218 GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277
            A  V  +       +  +  G  + ++ K     +++ L  L     D+  + +G  + 
Sbjct: 208 DA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTE 261

Query: 278 MRAALECCHKGWGTSVIVGVA 298
             A      K W  +  V + 
Sbjct: 262 TWAPD--FLKKWSGATYVTLV 280

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           LV E    AP   GEVRI +    +   DA    G  P       LG E AG+V   G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG---VASLGSEGAGVVVETGPG 282

Query: 82  VTEVQPGDHVI 92
           VT + PGD V+
Sbjct: 283 VTGLAPGDRVM 293

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 44.4 bits (105), Expect = 5e-06
 Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQV 256
           + V G G +G  +A   K +    V   D D          GV T+ V+ KD     + +
Sbjct: 8   ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL 67

Query: 257 L-VDLTDGGVDYSFECIGNVSVMRAALEC-CH 286
              D       +         + +AA     H
Sbjct: 68  GGFDAVISAAPFFL----TPIIAKAAKAAGAH 95

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
            AV GLG  G ++ +     G   V+ +DI+ +K +   ++ 
Sbjct: 9   FAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYA 49

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141

 Score = 41.5 bits (98), Expect = 7e-05
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
             V G    G+ +     AAG  +V+ +D   +K +  ++ G
Sbjct: 9   YIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEG 49

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 15/142 (10%)

Query: 151 QYTVVHDVSVAKIDPQ-APLDKVCLLGC-GVP--TGLGAVWNTAKVEPGSIVAVF---GL 203
              ++   S+ K+DPQ         LG  G+P  T L  +     +  GS   +      
Sbjct: 111 TKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAA 170

Query: 204 GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTD 262
           G  G    +     G SRV+GI    +K     +  G    +N K  +  + + L +   
Sbjct: 171 GACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCP 228

Query: 263 GGVDYSFECIGNV--SVMRAAL 282
            GVD  F+   NV  ++    +
Sbjct: 229 AGVDVYFD---NVGGNISDTVI 247

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           A+ +T     G+ VAV GLG VG++VA    A GA +V     +     R    G+ 
Sbjct: 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGME 200

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 40.9 bits (95), Expect = 3e-04
 Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
            +   G      G G + L     +   G  RV  ++I+P   + ++
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSR 163

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 9/43 (20%), Positives = 20/43 (46%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
           V + G+G +G    +  +A      +GI+I  +   + ++ G 
Sbjct: 42  VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR 84

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
           A+ +T     GS VAV GLG  G+ +A    A GA  V           R    G+  F
Sbjct: 147 AIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPF 204

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 39.8 bits (94), Expect = 7e-04
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
           G  V V GLG VG ++A  A  AGA +++  D D ++   A   G T
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.95
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.88
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.17
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.88
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.84
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.68
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.67
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.65
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.5
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.39
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.03
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.02
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.93
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.89
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.89
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.88
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.85
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.83
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.77
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.77
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.73
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.72
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.58
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.55
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.48
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.46
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.45
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.44
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.41
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.39
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.36
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.34
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.34
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.17
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.14
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.13
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.11
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.08
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.03
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.03
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.01
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.01
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.99
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.98
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.98
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.96
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.95
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.95
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.94
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.92
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.9
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.9
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.89
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.89
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.87
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.84
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.83
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.83
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.81
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.79
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.79
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.78
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.78
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.78
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.78
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.77
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.77
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.77
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.76
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.75
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.75
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.75
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.75
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.74
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.74
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.73
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.72
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.72
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.72
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.71
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.71
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.71
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.7
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.7
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.69
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.69
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.69
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.68
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.67
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.67
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.67
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.65
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.65
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.64
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.64
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.62
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.6
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.58
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.58
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.57
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.56
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.55
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.55
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.54
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.54
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.53
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.53
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.53
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.52
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.52
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.51
1spx_A	278	Short-chain reductase family member (5L265); paral	96.5
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.5
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.5
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.5
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.49
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.49
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.49
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.48
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.47
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.47
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.46
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.46
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.46
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.46
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.44
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.44
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.44
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.42
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.42
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.42
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.41
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.4
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.4
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.39
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.39
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.38
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.38
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.38
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.37
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.37
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.37
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.36
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.36
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.35
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.35
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.35
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.34
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.33
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.33
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.32
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.32
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.32
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.31
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.27
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.25
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.25
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.24
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.24
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.23
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.23
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.23
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.23
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.22
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.22
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.2
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.19
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.19
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.18
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.17
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.17
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.16
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.16
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.15
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.15
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.14
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.14
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.14
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.13
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.13
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.13
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.12
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.12
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.12
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.11
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.11
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.09
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.08
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.08
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.08
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.07
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.06
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.05
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.05
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.05
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.03
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.03
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.03
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.01
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.99
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.99
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.99
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.98
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.97
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.96
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.96
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.95
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.95
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.94
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.92
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.9
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.9
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.89
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.87
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.85
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.85
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.85
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.85
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.84
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.84
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.84
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.84
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.83
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.83
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.83
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.82
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.82
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.81
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.8
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.79
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.78
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.78
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.77
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.77
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.76
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.76
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.76
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.75
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.75
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.73
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.73
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.72
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.72
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.71
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.7
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.7
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.69
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.69
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.67
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.66
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.66
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.66
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.66
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.65
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.65
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.64
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.64
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.64
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.62
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.61
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.58
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.58
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.57
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.54
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.53
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.51
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.51
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.51
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.5
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.5
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.49
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.47
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.47
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.46
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.46
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.45
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.45
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.45
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.43
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.42
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.41
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.41
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.4
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.4
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.37
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.37
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.35
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.35
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.33
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.29
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.24
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.24
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.21
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.19
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.16
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.14
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.14
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.13
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.13
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.13
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.11
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.11
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.1
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.09
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.08
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.08
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.08
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.07
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.06
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.06
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.05
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.05
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.05
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.04
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.04
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.03
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.01
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.01
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	94.99
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.96
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.95
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.94
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	94.93
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	94.93
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.91
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.91
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.91
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	94.9
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.9
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	94.87
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.84
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.83
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.83
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.82
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.82
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.82
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.81
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.81
2i7c_A	283	Spermidine synthase; transferase, structural genom	94.78
4e4y_A	244	Short chain dehydrogenase family protein; structur	94.77
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	94.74
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	94.74
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	94.72
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.71
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	94.7
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	94.7
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.7
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.7
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	94.68
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.67
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	94.67
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.66
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	94.66
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.63
2o07_A	304	Spermidine synthase; structural genomics, structur	94.62
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.61
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.6
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	94.59
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.59
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	94.52
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.51
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.5
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	94.5
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.49
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	94.49
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.49
3i9f_A	170	Putative type 11 methyltransferase; structural gen	94.48
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.45
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	94.44
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.44
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.44
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	94.43
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	94.43
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.41
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.4
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	94.39
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	94.38
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	94.36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	94.33
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.33
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	94.32
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	94.32
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	94.31
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	94.31
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.3
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	94.3
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.3
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	94.23
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.23
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.21
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.2
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	94.2
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	94.19
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	94.19
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	94.14
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.13
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.12
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	94.1
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.05
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.03
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	94.03
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	94.01
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	94.01
2pt6_A	321	Spermidine synthase; transferase, structural genom	94.0
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	93.99

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.8e-60  Score=451.84  Aligned_cols=340  Identities=92%  Similarity=1.473  Sum_probs=309.7

Q ss_pred             CCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      ++.+|++|||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|..+...+|.++|||++|+|+++|++|
T Consensus         2 ~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v   81 (378)
T 3uko_A            2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   81 (378)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCC
Confidence            34678899999999999899999999999999999999999999999999999987777899999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      ++|++||||+..+...|+.|.+|+++++|.|.+.......|+...+|..++..+|.++++.++.|+|+||+++|++.+++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  161 (378)
T 3uko_A           82 TEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAK  161 (378)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEE
Confidence            99999999999999999999999999999999876544455554667777778888888888889999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +|+++++++||.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus       162 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  241 (378)
T 3uko_A          162 IDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE  241 (378)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE
Confidence            99999999999999999999999989999999999999999999999999999999978999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhcc-CCeEEEEeccCCCCCceecChhhhccccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK-GWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  321 (345)
                      ++++.+.+.++.+.+++++++++|++||++|++.++..+++++++ + |+++.+|.......+++++..++.++++.|+.
T Consensus       242 vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~  320 (378)
T 3uko_A          242 FVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVTGRVWKGTA  320 (378)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             EEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEcccCCCCccccCHHHHhcCcEEEEEE
Confidence            999874346788999999888999999999998889999999999 4 99999998665667888888777799999998


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++.+...++++++++++++|+.
T Consensus       321 ~~~~~~~~~~~~~~~l~~~g~l  342 (378)
T 3uko_A          321 FGGFKSRTQVPWLVEKYMNKEI  342 (378)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSS
T ss_pred             ecCCCchHHHHHHHHHHHcCCC
Confidence            8877667889999999999874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=9.5e-58  Score=433.66  Aligned_cols=337  Identities=53%  Similarity=0.916  Sum_probs=288.5

Q ss_pred             CCCCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCC
Q 019139            1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      |++++.|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            89899999999999999987799999999999999999999999999999999998765 56899999999999999999


Q ss_pred             CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                      +|+.|++||||+..+..+|+.|.+|++++++.|.+.....+.|+. .+|..++..+|.+.++....|+|+||+++|++.+
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhE
Confidence            999999999999999999999999999999999976532111221 1221122222333334444579999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +++|++++++ ||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  237 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA  237 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence            9999999999 999999999999998888999999999999999999999999999999789999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-eEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWK  318 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  318 (345)
                      ++++++.+.+.++.+.+.+++++++|++||++|++.++..+++++++ + |+++.+|.......+++++..++. + ++.
T Consensus       238 ~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  315 (373)
T 1p0f_A          238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLK  315 (373)
T ss_dssp             SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             cEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEE
Confidence            99998864224678888888877999999999997779999999999 6 999999986544467888877766 7 999


Q ss_pred             EeeecCCcccccHHHHHHHHhcccc
Q 019139          319 GTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       319 g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |+.++.+. .++++++++++++|++
T Consensus       316 g~~~~~~~-~~~~~~~~~l~~~g~i  339 (373)
T 1p0f_A          316 GSVFGGFK-GEEVSRLVDDYMKKKI  339 (373)
T ss_dssp             ECSGGGCC-GGGHHHHHHHHHTTSS
T ss_pred             eeccCCcC-HHHHHHHHHHHHcCCC
Confidence            99765442 2689999999999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.9e-56  Score=424.79  Aligned_cols=337  Identities=55%  Similarity=0.948  Sum_probs=287.2

Q ss_pred             CCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +...|++|||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|.++.. +|.++|||++|+|+++|++|
T Consensus         2 ~~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v   80 (374)
T 2jhf_A            2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGV   80 (374)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTC
T ss_pred             CCCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCC
Confidence            34568999999999998789999999999999999999999999999999999876543 89999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      ++|++||||+..+..+|+.|.+|++++++.|.+.....+.|+. .+|..++..+|.++++++..|+|+||+++|++.+++
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  159 (374)
T 2jhf_A           81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAK  159 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEE
Confidence            9999999999999999999999999999999976532111221 122112222233333444457999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++
T Consensus       160 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  239 (374)
T 2jhf_A          160 IDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE  239 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCce
Confidence            99999999999999999999999888899999999999999999999999999999978999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-eEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      ++++.+...++.+.+.+++++++|++||++|.+.++..+++++++ + |+++.+|.......+++++..++. + ++.|+
T Consensus       240 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~  317 (374)
T 2jhf_A          240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGA  317 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEEC
T ss_pred             EecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEe
Confidence            998864224677888888877999999999998779999999999 6 999999986544467788877776 7 99999


Q ss_pred             eecCCcccccHHHHHHHHhcccc
Q 019139          321 AFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .++.+...++++++++++++|++
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~g~i  340 (374)
T 2jhf_A          318 IFGGFKSKDSVPKLVADFMAKKF  340 (374)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSS
T ss_pred             ccCCCChHHHHHHHHHHHHcCCC
Confidence            76654445789999999999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.1e-56  Score=424.78  Aligned_cols=335  Identities=50%  Similarity=0.913  Sum_probs=284.9

Q ss_pred             CCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +...|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|. +...+|.++|||++|+|+++|++|
T Consensus         2 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v   80 (376)
T 1e3i_A            2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGV   80 (376)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCC
Confidence            3467899999999999877999999999999999999999999999999999886 445689999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcC----CCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR----GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~----~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      +.|++||||+..+..+|++|.+|++++++.|.+..    ...+.|.. .+|..++..+|.+..+++..|+|+||+++|++
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           81 TNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEeccc
Confidence            99999999999999999999999999999998754    10001221 12211111223333334445799999999999


Q ss_pred             eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       159 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      .++++|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  239 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL  239 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence            99999999999999999999999999988889999999999999999999999999999997899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-eEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      |+++++++.+.+.++.+.+.+++++++|++||++|++.+++.+++++++ + |+++.+|..  ...+++++..++. + +
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~--~~~~~~~~~~~~~~~-~  315 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAK--VDEMTIPTVDVILGR-S  315 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCS--SSEEEEEHHHHHTTC-E
T ss_pred             CCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCC--CCccccCHHHhhccC-e
Confidence            9999998864224678888888877999999999997779999999999 6 999999983  3467788877776 7 9


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.|+.++.+...++++++++++++|++
T Consensus       316 i~g~~~~~~~~~~~~~~~~~l~~~g~i  342 (376)
T 1e3i_A          316 INGTFFGGWKSVDSVPNLVSDYKNKKF  342 (376)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHcCCC
Confidence            999976654445789999999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1.4e-56  Score=425.71  Aligned_cols=336  Identities=70%  Similarity=1.142  Sum_probs=286.4

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ..|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|.++...+|.++|||++|+|+++|++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            46789999999999878999999999999999999999999999999999987765578999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+..+|+.|.+|+++++|.|.+.....+.|+. .+|..++..+|.+.+++...|+|+||+++|++.++++|
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence            99999999999999999999999999999875321001211 12211111223333344445799999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  240 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI  240 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence            99999999999999999999988889999999999999999999999999999997799999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-eEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      ++.+...++.+.+.+++++++|++||++|...++..+++++++ + |+++.+|.......+++++..++. + ++.|+.+
T Consensus       241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  318 (373)
T 2fzw_A          241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF  318 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc
Confidence            8864224678888888877999999999998779999999999 6 999999986544467788877776 7 9999976


Q ss_pred             cCCcccccHHHHHHHHhcccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.+...++++++++++++|++
T Consensus       319 ~~~~~~~~~~~~~~l~~~g~l  339 (373)
T 2fzw_A          319 GGWKSVESVPKLVSEYMSKKI  339 (373)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSS
T ss_pred             CCCCcHHHHHHHHHHHHcCCC
Confidence            654445789999999999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-56  Score=422.51  Aligned_cols=336  Identities=58%  Similarity=1.034  Sum_probs=285.9

Q ss_pred             CCCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccc-cccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139            3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      +...|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++ ++.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~   80 (374)
T 1cdo_A            2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPG   80 (374)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTT
T ss_pred             CCCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCC
Confidence            34678999999999998789999999999999999999999999999999 8888765 568999999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA  161 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  161 (345)
                      |++|++||||+..+..+|+.|.+|+++++|.|++.....+.|+. .+|..++..+|.+.+++...|+|+||+++|++.++
T Consensus        81 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (374)
T 1cdo_A           81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (374)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheE
Confidence            99999999999999999999999999999999876432111221 12211111222233333345799999999999999


Q ss_pred             EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      ++|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++
T Consensus       160 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          160 KIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             ECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999999988889999999999999999999999999999997899999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCC-eEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      +++++.+.+.++.+.+.+.+++++|++||++|.+.++..+++++++ + |+++.+|.... ..+++++..++. + ++.|
T Consensus       240 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g  316 (374)
T 1cdo_A          240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKG  316 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEE
T ss_pred             eEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEE
Confidence            9998864224677888888877999999999997779999999999 6 99999998543 457788877776 7 9999


Q ss_pred             eeecCCcccccHHHHHHHHhcccc
Q 019139          320 TAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.++.+...++++++++++++|++
T Consensus       317 ~~~~~~~~~~~~~~~~~l~~~g~l  340 (374)
T 1cdo_A          317 SMFGGFKGKDGVPKMVKAYLDKKV  340 (374)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSS
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCC
Confidence            976654445789999999999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-55  Score=418.26  Aligned_cols=331  Identities=30%  Similarity=0.532  Sum_probs=278.9

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++|+.|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            46899999999987799999999999999999999999999999999998765 45799999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccc-cCCCcc-ccccCcceeeeeEEeecceEEEcC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +||||++.+ .+|+.|.+|++++++.|.+.......|.. .+|..++. .+|.+. .+.+..|+|+||+++|++.++++|
T Consensus        83 ~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           83 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            999999999 99999999999999999875411000100 11100000 000000 001224699999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            99999999999999999999998889999999999999999999999999999996799999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      ++.+  .++.+.+.+.+++++|++||++|.+.++..++++++++ |+++.+|........++++..++. ++++.|++++
T Consensus       241 ~~~~--~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          241 NSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             ETTT--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             cCCc--cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            9876  57788888888779999999999987799999999997 999999986544456788777776 9999999876


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .....++++++++++++|++
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l  337 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKF  337 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSC
T ss_pred             CCchHHHHHHHHHHHHcCCC
Confidence            54445778999999999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.3e-54  Score=409.90  Aligned_cols=306  Identities=25%  Similarity=0.404  Sum_probs=275.1

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ..|.+|||+++.+++. ++++++|.|+|++|||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++++.
T Consensus        19 ~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             --CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTTCCS
T ss_pred             ccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCCCCC
Confidence            3567899999999975 99999999999999999999999999999999998763 467999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+...|+.|.+|+.++++.|.+...   .|.. .+                  |+|+||+++|++.++++|
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~~P  154 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIH-RD------------------GGFAEYVLVPRKQAFEIP  154 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEEEC
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCC-CC------------------CcceEEEEEchhhEEECC
Confidence            9999999999999999999999999999998654   2322 23                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++|| +..++.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++
T Consensus       155 ~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  232 (370)
T 4ej6_A          155 LTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV  232 (370)
T ss_dssp             TTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE
Confidence            999999998 566999999988 888999999999999999999999999999998899999999999999999999999


Q ss_pred             CCCCCCccHHHHHHh---hcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          245 NPKDHDKPIQQVLVD---LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~---~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      |+.+  .++.+.+.+   ++++++|++||++|+..++..++++++++ |+++.+|........++++..++. ++++.|+
T Consensus       233 ~~~~--~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          233 DPSA--GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             CTTS--SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             CCCC--cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEe
Confidence            9977  678888887   77779999999999888899999999997 999999986655577888888887 9999999


Q ss_pred             eecCCcccccHHHHHHHHhcccc
Q 019139          321 AFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.+.    .+++++++++++|+.
T Consensus       310 ~~~~----~~~~~~~~l~~~g~i  328 (370)
T 4ej6_A          310 FINP----FVHRRAADLVATGAI  328 (370)
T ss_dssp             CSCT----TCHHHHHHHHHTTCS
T ss_pred             ccCh----HHHHHHHHHHHcCCC
Confidence            7543    568999999999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=6.5e-54  Score=402.36  Aligned_cols=302  Identities=28%  Similarity=0.459  Sum_probs=272.1

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      +|||+++.+++++++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            5999999999888999999999999999999999999999999999998765 468999999999999999999999999


Q ss_pred             CCEE-EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           88 GDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        88 Gd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      |||| +..+...|+.|.+|++++++.|.+...   .|.. .+                  |+|+||+++|++.++++|++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~  139 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYS-VN------------------GGYGEYVVADPNYVGLLPDK  139 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEECTTTSEECCTT
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCC-CC------------------CcceeEEEechHHEEECCCC
Confidence            9999 456778999999999999999998664   2322 33                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++||++++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~  217 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA  217 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            99999999999999999988 77799999999999999999999999999999 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      ++  .++.+.+.+ +.+++|++||++|+..+++.++++++++ |+++.+|...  ...+++...++. ++++.|+..++ 
T Consensus       218 ~~--~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~-  290 (340)
T 3s2e_A          218 RD--TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP--GDFGTPIFDVVLKGITIRGSIVGT-  290 (340)
T ss_dssp             TT--SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS--SEEEEEHHHHHHTTCEEEECCSCC-
T ss_pred             CC--cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC--CCCCCCHHHHHhCCeEEEEEecCC-
Confidence            87  677778877 4458999999999988899999999997 9999999854  357778777777 99999997653 


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                        .+++.++++++++|++
T Consensus       291 --~~~~~~~~~l~~~g~l  306 (340)
T 3s2e_A          291 --RSDLQESLDFAAHGDV  306 (340)
T ss_dssp             --HHHHHHHHHHHHTTSC
T ss_pred             --HHHHHHHHHHHHhCCC
Confidence              4788999999988864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-54  Score=406.52  Aligned_cols=305  Identities=27%  Similarity=0.372  Sum_probs=265.2

Q ss_pred             CCcceeeeeeeeccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeC
Q 019139            4 EGQVITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVG   79 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G   79 (345)
                      +..|++|||+++.+++.+++++++|.|+ |++|||||||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|
T Consensus        10 ~~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG   89 (359)
T 1h2b_A           10 SLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVA   89 (359)
T ss_dssp             -------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEEC
T ss_pred             cCChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEEC
Confidence            3457789999999998779999999999 9999999999999999999999998765   34689999999999999999


Q ss_pred             CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      ++|++|++||||+..+..+|+.|.+|+++++++|++...   .|+. .+                  |+|+||+++|++.
T Consensus        90 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~  147 (359)
T 1h2b_A           90 EGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-ID------------------GGFAEFMRTSHRS  147 (359)
T ss_dssp             TTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEECGGG
T ss_pred             CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccC-CC------------------CcccceEEechHh
Confidence            999999999999988889999999999999999987653   2322 23                  4999999999999


Q ss_pred             EEEcCCCCChhhhc---ccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHH
Q 019139          160 VAKIDPQAPLDKVC---LLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDR  234 (345)
Q Consensus       160 ~~~iP~~l~~~~aa---~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~  234 (345)
                      ++++|+++++++||   .+++++.|||+++.+. .++++|++|||+|+|++|++++|+|+.+ |+ +|++++++++++++
T Consensus       148 ~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~  226 (359)
T 1h2b_A          148 VIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKL  226 (359)
T ss_dssp             EEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHH
T ss_pred             EEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHH
Confidence            99999999999999   7888899999998665 8999999999999999999999999999 99 89999999999999


Q ss_pred             HHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHH--HHHHHHHHhccCCeEEEEeccCCCCCceecChhhh
Q 019139          235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVS--VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL  311 (345)
Q Consensus       235 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~--~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  311 (345)
                      ++++|+++++|+++  . +.+.+.+++++ ++|++||++|++.  ++..++++  ++ |+++.+|....  . ++++..+
T Consensus       227 ~~~lGa~~vi~~~~--~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~--~-~~~~~~~  297 (359)
T 1h2b_A          227 AERLGADHVVDARR--D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGE--L-RFPTIRV  297 (359)
T ss_dssp             HHHTTCSEEEETTS--C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSC--C-CCCHHHH
T ss_pred             HHHhCCCEEEeccc--h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCC--C-CCCHHHH
Confidence            99999999999876  4 77888888887 9999999999976  68888887  86 99999998543  2 6777676


Q ss_pred             cc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          312 VT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       312 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +. ++++.|+..+.   .++++++++++++|++
T Consensus       298 ~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l  327 (359)
T 1h2b_A          298 ISSEVSFEGSLVGN---YVELHELVTLALQGKV  327 (359)
T ss_dssp             HHTTCEEEECCSCC---HHHHHHHHHHHHTTSC
T ss_pred             HhCCcEEEEecCCC---HHHHHHHHHHHHcCCC
Confidence            66 99999987543   4789999999998864

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1e-52  Score=394.94  Aligned_cols=305  Identities=25%  Similarity=0.366  Sum_probs=268.1

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |||+++.+++++++++++|.|+|++|||||||.++|||++|++.+.|.++.  ..+|.++|||++|+|+++|++|++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            899999999988999999999999999999999999999999999987643  468999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCC--CCCceecCCcccccccCCCccccccCcceeeeeEEee-cceEEEcC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGA--TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKID  164 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~--~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~iP  164 (345)
                      ||||+..+...|+.|.+|++++++.|......  ...|.                   ...|+|+||+++| .+.++++|
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~-------------------~~~G~~aey~~v~~~~~~~~~p  141 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGL-------------------GSPGSMAEYMIVDSARHLVPIG  141 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTT-------------------TBCCSSBSEEEESCGGGEEECT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCc-------------------CCCceeeEEEEecchhceEeCC
Confidence            99999999999999999999999999432211  00111                   1234999999999 99999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHh-hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~-~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      + +++++||++++++.|||+++.+ ...+++|++|+|+|+|++|++++|+|+.+|..+|++++++++++++++++|++.+
T Consensus       142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~  220 (345)
T 3jv7_A          142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA  220 (345)
T ss_dssp             T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence            9 9999999999999999999976 4589999999999999999999999999954499999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      +++++   ++.+.+.+++++ ++|++||++|++.+++.++++++++ |+++.+|.... ...+++. .++. ++++.|+.
T Consensus       221 i~~~~---~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~-~~~~~~~~i~g~~  294 (345)
T 3jv7_A          221 VKSGA---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG-AHAKVGF-FMIPFGASVVTPY  294 (345)
T ss_dssp             EECST---THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTT-CCEEEST-TTSCTTCEEECCC
T ss_pred             EcCCC---cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CCCCcCH-HHHhCCCEEEEEe
Confidence            98864   678889999888 9999999999987899999999997 99999998543 3566775 5555 99999997


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .++   .+++.++++++++|+.
T Consensus       295 ~~~---~~~~~~~~~l~~~g~l  313 (345)
T 3jv7_A          295 WGT---RSELMEVVALARAGRL  313 (345)
T ss_dssp             SCC---HHHHHHHHHHHHTTCC
T ss_pred             cCC---HHHHHHHHHHHHcCCC
Confidence            653   4788999999998875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=6.5e-53  Score=396.79  Aligned_cols=304  Identities=25%  Similarity=0.337  Sum_probs=257.4

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccC-CCC--CCCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDP--EGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ++|||+++.+++..++++++|.|+|++|||||||.++|||++|++++.| .++  ...+|.++|||++|+|+++|++|++
T Consensus         3 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   82 (348)
T 2d8a_A            3 EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG   82 (348)
T ss_dssp             CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence            4699999999985699999999999999999999999999999999988 433  2367999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+..+|+.|.+|++|++++|++...   .|.. .+                  |+|+||+++|++.++++|
T Consensus        83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP  140 (348)
T 2d8a_A           83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-TD------------------GVFAEYAVVPAQNIWKNP  140 (348)
T ss_dssp             CCTTCEEEECCEECCSCCC------------CEE---TTTS-SC------------------CSSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCC-CC------------------CcCcceEEeChHHeEECC
Confidence            9999999999999999999999999999987653   2222 23                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++||+++ +++|||+++ +..++ +|++|+|+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++
T Consensus       141 ~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~  217 (348)
T 2d8a_A          141 KSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI  217 (348)
T ss_dssp             TTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence            999999999886 888999998 77888 999999999999999999999999987899999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh-hhhcc-ccEEEEee
Q 019139          245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT-GRVWKGTA  321 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~i~g~~  321 (345)
                      ++++  .++.+.+.+++++ ++|++||++|...+++.++++++++ |+++.+|....  ...+++ ..++. ++++.|+.
T Consensus       218 ~~~~--~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~  292 (348)
T 2d8a_A          218 NPFE--EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALTIYGIT  292 (348)
T ss_dssp             CTTT--SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCEEEECC
T ss_pred             CCCC--cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcEEEEec
Confidence            9876  5788888888887 8999999999977799999999997 99999998543  466777 66666 99999986


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ...  ..++++++++++++|++
T Consensus       293 ~~~--~~~~~~~~~~l~~~g~i  312 (348)
T 2d8a_A          293 GRH--LWETWYTVSRLLQSGKL  312 (348)
T ss_dssp             CCC--SHHHHHHHHHHHHHTCC
T ss_pred             CCC--cHHHHHHHHHHHHcCCC
Confidence            543  14789999999999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=5.7e-53  Score=397.78  Aligned_cols=307  Identities=24%  Similarity=0.333  Sum_probs=270.1

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccc-cccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.++++ ++++++|.|+|++|||||||.+++||++|++ ++.|.++. ++|.++|||++|+|+++|++|++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE-RHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC-CSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC-CCCcccCCcceEEEEEECCCCCcCCCC
Confidence            89999999988 9999999999999999999999999999999 55776653 579999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc--eEEEcCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ  166 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~  166 (345)
                      |||++.+..+|+.|.+|+.++++.|.........|.. .                  .|+|+||+++|+.  .++++|++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~-~------------------~G~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV-K------------------DGVFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTT-B------------------CCSSBSCEEESSHHHHCEECCTT
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccC-C------------------CCcccceEEeccccCeEEECCCC
Confidence            9999999999999999999999999765432112211 2                  3499999999976  89999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++||.++.+++|||+++ +..++++|++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  218 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY  218 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred             CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence            99999999999999999987 88899999999999999999999999999999789999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhh---ccccEEEEeee
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL---VTGRVWKGTAF  322 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~---~~~~~i~g~~~  322 (345)
                      ++  .++.+.+.+++++ ++|++||++|++.+++.++++|+++ |+++.+|.......++++...+   ++++++.|+..
T Consensus       219 ~~--~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (352)
T 3fpc_A          219 KN--GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC  295 (352)
T ss_dssp             GG--SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred             CC--cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence            77  6788999999988 9999999999977799999999997 9999999866555566665543   23889999864


Q ss_pred             cCCcccccHHHHHHHHhcccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ..  ..++++++++++++|++
T Consensus       296 ~~--~~~~~~~~~~l~~~g~i  314 (352)
T 3fpc_A          296 PG--GRLRMERLIDLVFYKRV  314 (352)
T ss_dssp             CC--HHHHHHHHHHHHHTTSC
T ss_pred             cC--chhHHHHHHHHHHcCCC
Confidence            32  24678999999999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=3.3e-52  Score=391.47  Aligned_cols=305  Identities=23%  Similarity=0.320  Sum_probs=265.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||++++++|. ++++|+|.|+ |+||||||||.|+|||++|++.+.|..+ ..+|+++|||++|+|+++|++|+.+++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            89999999987 9999999998 5799999999999999999999888654 3689999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|.+.+...|+.|.+|+.++++.|.+...   .|.. .+                  |+|+||+++|++.++++|++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~l~  136 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSR-RD------------------GGFAEYIVVKRKNVFALPTDMP  136 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTT-BC------------------CSSBSEEEEEGGGEEECCTTSC
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCccc---ccCC-CC------------------cccccccccchheEEECCCCCC
Confidence            999999999999999999999999998764   2322 33                  4999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +++||+++ ++.++++ +....++++|++|+|+|+|++|++++|+|+++|++.+++++++++|+++++++|+++++|+++
T Consensus       137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~  214 (346)
T 4a2c_A          137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE  214 (346)
T ss_dssp             GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence            99999876 4455555 568889999999999999999999999999999978889999999999999999999999987


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce-ecChhhhcc-ccEEEEeeecCC
Q 019139          249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                        .+..+.+..++++ ++|++||++|++.+++.++++++++ |+++++|.......+ .++...++. ++++.|++++..
T Consensus       215 --~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~  291 (346)
T 4a2c_A          215 --MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYS  291 (346)
T ss_dssp             --SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCC
T ss_pred             --CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEecccc
Confidence              6677788888877 8999999999988899999999997 999999986543332 233444555 999999976543


Q ss_pred             c--ccccHHHHHHHHhcccc
Q 019139          326 K--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~--~~~~~~~~~~~~~~g~~  343 (345)
                      .  ..++++++++++++|++
T Consensus       292 ~~~~~~~~~~~~~l~~~g~l  311 (346)
T 4a2c_A          292 SPWPGQEWETASRLLTERKL  311 (346)
T ss_dssp             SSTTCHHHHHHHHHHHTTCS
T ss_pred             CcchHHHHHHHHHHHHcCCC
Confidence            2  34788999999999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=7.9e-53  Score=398.39  Aligned_cols=309  Identities=24%  Similarity=0.290  Sum_probs=266.2

Q ss_pred             CCCCCcceeeeeeeeccCCCCeEEEEeecC--------CCCCCeEEEEEeeeecCccccccccCCC-C--CCCCCcccCc
Q 019139            1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVA--------PPQAGEVRIKILFTALCHTDAYTWSGKD-P--EGLFPCILGH   69 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p--------~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~   69 (345)
                      |++ +.+++|||+++.+++. ++++++|.|        +|++|||||||.++|||++|++++.+.. .  ..++|.++||
T Consensus         1 m~~-~~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~   78 (363)
T 3m6i_A            1 MAS-SASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGH   78 (363)
T ss_dssp             -----CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCC
T ss_pred             CCC-CCcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCc
Confidence            543 3568899999998877 999999999        9999999999999999999999887332 2  2367999999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCccee
Q 019139           70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF  149 (345)
Q Consensus        70 e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~  149 (345)
                      |++|+|+++|++|++|++||||+..+..+|+.|.+|+.|+++.|.+....   |....+                  |+|
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~~~~~------------------G~~  137 (363)
T 3m6i_A           79 ESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL---STPPVP------------------GLL  137 (363)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TSTTSC------------------CSC
T ss_pred             ceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc---CCCCCC------------------ccc
Confidence            99999999999999999999999999999999999999999999987642   221123                  499


Q ss_pred             eeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          150 SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       150 a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +||+++|++.++++|+ +++++||.+. ++.|||+++ +..++++|++|||+|+|++|++++|+||.+|+++|+++++++
T Consensus       138 aey~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~  214 (363)
T 3m6i_A          138 RRYVNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDE  214 (363)
T ss_dssp             BSEEEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCH
T ss_pred             eeEEEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            9999999999999999 9999999884 888999998 888999999999999999999999999999996699999999


Q ss_pred             hHHHHHHhcCCceEeCCCC---CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee
Q 019139          230 KKFDRAKNFGVTEFVNPKD---HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS  305 (345)
Q Consensus       230 ~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~  305 (345)
                      +++++++++ ++.++++..   .+.++.+.+++++++ ++|++||++|++.++..++++++++ |+++.+|....  ...
T Consensus       215 ~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~  290 (363)
T 3m6i_A          215 GRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKN--EIQ  290 (363)
T ss_dssp             HHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCS--CCC
T ss_pred             HHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCC--Ccc
Confidence            999999999 766665431   125678888889877 9999999999987799999999997 99999998543  456


Q ss_pred             cChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          306 TRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       306 ~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +++..++. ++++.|+..+    .++++++++++++|++
T Consensus       291 ~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i  325 (363)
T 3m6i_A          291 IPFMRASVREVDLQFQYRY----CNTWPRAIRLVENGLV  325 (363)
T ss_dssp             CCHHHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSS
T ss_pred             ccHHHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCC
Confidence            77777777 9999998754    4789999999998875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.8e-52  Score=394.96  Aligned_cols=306  Identities=23%  Similarity=0.332  Sum_probs=265.3

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-C--CCCCCcccCcceeEEEEEeCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-P--EGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +|+|||+++.+++. ++++++|.|+|++|||||||.++|||++|++++.|.. .  ...+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            46799999999865 9999999999999999999999999999999887432 1  135789999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      +|++||||+..+..+|+.|.+|++|+++.|.+...   .|....+                  |+|+||+++|++.++++
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~i  142 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDD------------------GNLCRFYKHNAAFCYKL  142 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCC------------------CccccEEEeehHHEEEC
Confidence            99999999999999999999999999999997653   2221122                  49999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      |+++++++||.+ .+++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++
T Consensus       143 P~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  220 (356)
T 1pl8_A          143 PDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV  220 (356)
T ss_dssp             CTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            999999999876 4888999988 78899999999999999999999999999999789999999999999999999999


Q ss_pred             eCCCCC-CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          244 VNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       244 i~~~~~-~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++++.. ..++.+.+.+.+++++|++||++|++.++..++++|+++ |+++.+|...  ...++++..++. ++++.|+.
T Consensus       221 i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~  297 (356)
T 1pl8_A          221 LQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVF  297 (356)
T ss_dssp             EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECC
T ss_pred             EcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHhcceEEEEec
Confidence            988621 145667777777668999999999987799999999997 9999999743  346677777766 99999986


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ..    .++++++++++++|++
T Consensus       298 ~~----~~~~~~~~~l~~~g~i  315 (356)
T 1pl8_A          298 RY----CNTWPVAISMLASKSV  315 (356)
T ss_dssp             SC----SSCHHHHHHHHHTTSC
T ss_pred             cc----HHHHHHHHHHHHcCCC
Confidence            43    4679999999999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=4.2e-52  Score=389.93  Aligned_cols=301  Identities=30%  Similarity=0.469  Sum_probs=266.5

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++.+++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++|+.|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            799999999867999999999999999999999999999999999987653 3689999999999999999999999999


Q ss_pred             CEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        89 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      |||++.+. ..|+.|.+|++++++.|.+...   .|.. .+                  |+|+||+++|++.++++|+++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~~P~~~  138 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VD------------------GGYAEYCRAAADYVVKIPDNL  138 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcce---eecC-CC------------------CcceeeEEechHHEEECCCCC
Confidence            99998765 4699999999999999987653   2222 23                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||++++++.|||+++... ++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~  216 (339)
T 1rjw_A          139 SFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL  216 (339)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CHHHhhhhhhhHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence            9999999999999999998554 89999999999998899999999999999 999999999999999999999999887


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                      +  .++.+.+.+.+ +++|++||++|.+.+++.++++++++ |+++.+|....  .+++++..++. ++++.|+..+.  
T Consensus       217 ~--~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~--  288 (339)
T 1rjw_A          217 K--EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT--  288 (339)
T ss_dssp             T--SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC--
T ss_pred             C--ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC--
Confidence            6  56777777777 68999999999977799999999997 99999998543  46778777776 99999987553  


Q ss_pred             ccccHHHHHHHHhcccc
Q 019139          327 SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~~  343 (345)
                       .++++++++++++|++
T Consensus       289 -~~~~~~~~~l~~~g~l  304 (339)
T 1rjw_A          289 -RKDLQEALQFAAEGKV  304 (339)
T ss_dssp             -HHHHHHHHHHHHTTSC
T ss_pred             -HHHHHHHHHHHHcCCC
Confidence             4789999999998864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.1e-52  Score=395.36  Aligned_cols=305  Identities=26%  Similarity=0.349  Sum_probs=259.7

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |+|||+++.+++++++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            68999999999888999999999999999999999999999999999998877788999999999999999999999999


Q ss_pred             CCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        88 Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      ||||++.+. .+|+.|.+|++++++.|. ....   |+. .+.        .+..+....|+|+||+++|++.++++|++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~---~~~-~~~--------~~~~~~~~~G~~aey~~v~~~~~~~iP~~  149 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVF---TYD-CLD--------SFHDNEPHMGGYSNNIVVDENYVISVDKN  149 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEE---SSS-SEE--------GGGTTEECCCSSBSEEEEEGGGCEECCTT
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCc-cccc---ccc-ccc--------ccccCCcCCccccceEEechhhEEECCCC
Confidence            999988654 799999999999999998 3221   111 000        00001122359999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++||++++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++ .
T Consensus       150 ~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~  226 (348)
T 3two_A          150 APLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T  226 (348)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S
T ss_pred             CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C
Confidence            999999999999999999884 5699999999999999999999999999999 899999999999999999999988 2


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhc-c-ccEEEEeeec
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLV-T-GRVWKGTAFG  323 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~-~-~~~i~g~~~~  323 (345)
                      +.  +.+        ..++|++||++|++.+++.++++++++ |+++.+|.... .... +++..++ . ++++.|+..+
T Consensus       227 ~~--~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~  294 (348)
T 3two_A          227 DP--KQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPV-EVAPVLSVFDFIHLGNRKVYGSLIG  294 (348)
T ss_dssp             SG--GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCG-GGCCEEEHHHHHHTCSCEEEECCSC
T ss_pred             CH--HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCC-CCcccCCHHHHHhhCCeEEEEEecC
Confidence            21  111        118999999999985699999999997 99999998541 2344 7767776 6 9999999876


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.   +++.++++++++|++
T Consensus       295 ~~---~~~~~~~~l~~~g~l  311 (348)
T 3two_A          295 GI---KETQEMVDFSIKHNI  311 (348)
T ss_dssp             CH---HHHHHHHHHHHHTTC
T ss_pred             CH---HHHHHHHHHHHhCCC
Confidence            44   678899999988864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-52  Score=394.39  Aligned_cols=313  Identities=26%  Similarity=0.399  Sum_probs=268.8

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC----
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT----   83 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~----   83 (345)
                      .+|||+++.++++.++++++|.|+|++|||||||.++|||++|++++.|.++...+|.++|||++|+|+++| +|+    
T Consensus        16 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~   94 (380)
T 1vj0_A           16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLN   94 (380)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTT
T ss_pred             hheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccccc
Confidence            579999999998569999999999999999999999999999999999976645689999999999999999 999    


Q ss_pred             --CCCCCCEEEecCcCCCCCCcccc-CCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEe-ecce
Q 019139           84 --EVQPGDHVIPCYQAECRECKFCK-SGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDVS  159 (345)
Q Consensus        84 --~~~~Gd~V~~~~~~~~~~c~~c~-~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~~  159 (345)
                        .|++||||+..+..+|+.|.+|+ ++++++|.+...   .|.....+        .   .....|+|+||+++ |++.
T Consensus        95 ~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~--------~---~~~~~G~~aey~~v~~~~~  160 (380)
T 1vj0_A           95 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCS--------E---YPHLRGCYSSHIVLDPETD  160 (380)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSS--------S---TTCCCSSSBSEEEECTTCC
T ss_pred             CCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccC--------C---CCCCCccccceEEEcccce
Confidence              99999999999999999999999 999999987643   12100000        0   00112599999999 9999


Q ss_pred             EEEcCCCCChh-hhcccccchhhhhHHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          160 VAKIDPQAPLD-KVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       160 ~~~iP~~l~~~-~aa~~~~~~~ta~~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      ++++|++++++ +|+.++ +++|||+++ +..+ +++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++++++
T Consensus       161 ~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~  238 (380)
T 1vj0_A          161 VLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE  238 (380)
T ss_dssp             EEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             EEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence            99999999999 666666 999999998 6678 9999999999999999999999999994489999999999999999


Q ss_pred             cCCceEeCCC---CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh-hc
Q 019139          238 FGVTEFVNPK---DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LV  312 (345)
Q Consensus       238 ~g~~~~i~~~---~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~  312 (345)
                      +|++.++++.   +  .++.+.+.+++++ ++|++||++|.+.++..++++++++ |+++.+|....+...++++.. ++
T Consensus       239 lGa~~vi~~~~~~~--~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~  315 (380)
T 1vj0_A          239 IGADLTLNRRETSV--EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLV  315 (380)
T ss_dssp             TTCSEEEETTTSCH--HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTT
T ss_pred             cCCcEEEeccccCc--chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHHH
Confidence            9999999886   4  5677888888887 9999999999877799999999997 999999985412256788777 66


Q ss_pred             c-ccEEEEeeecCCcccccHHHHHHHHhc--ccc
Q 019139          313 T-GRVWKGTAFGGFKSRSQVPWLVDKYMK--KVN  343 (345)
Q Consensus       313 ~-~~~i~g~~~~~~~~~~~~~~~~~~~~~--g~~  343 (345)
                      . ++++.|+..+.   .++++++++++++  |++
T Consensus       316 ~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l  346 (380)
T 1vj0_A          316 LKNATFKGIWVSD---TSHFVKTVSITSRNYQLL  346 (380)
T ss_dssp             TTTCEEEECCCCC---HHHHHHHHHHHHTCHHHH
T ss_pred             hCCeEEEEeecCC---HHHHHHHHHHHHhhcCCe
Confidence            6 99999987653   4789999999988  753

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-51  Score=387.38  Aligned_cols=308  Identities=28%  Similarity=0.436  Sum_probs=269.6

Q ss_pred             cceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 019139            6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      .|.+|||+++.+++.+++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            4668999999999867999999999999999999999999999999999987653 368999999999999999999999


Q ss_pred             CCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      |++||||++.+. ..|+.|.+|+++++++|.+...   .|.. .+                  |+|+||+++|++.++++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~i  139 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYT-HD------------------GSFQQYATADAVQAAHI  139 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEETTTSEEE
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccC-CC------------------CcceeEEEeccccEEEC
Confidence            999999998765 4699999999999999987643   2221 23                  49999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      |+++++++||++++++.|||+++. ..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.
T Consensus       140 P~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~  217 (347)
T 2hcy_A          140 PQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEV  217 (347)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCE
T ss_pred             CCCCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCce
Confidence            999999999999999999999884 458999999999998 9999999999999999 9999999999999999999998


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++|+.+ ..++.+.+.+.+.+++|++||++|....++.++++|+++ |+++.+|... +..+++++..++. ++++.|+.
T Consensus       218 ~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~  294 (347)
T 2hcy_A          218 FIDFTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA-GAKCCSDVFNQVVKSISIVGSY  294 (347)
T ss_dssp             EEETTT-CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCT-TCEEEEEHHHHHHTTCEEEECC
T ss_pred             EEecCc-cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCC-CCCCCCCHHHHhhCCcEEEEcc
Confidence            888763 256777777777668999999999977799999999997 9999999854 3456788877776 99999987


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .+.   .++++++++++++|+.
T Consensus       295 ~~~---~~~~~~~~~l~~~g~l  313 (347)
T 2hcy_A          295 VGN---RADTREALDFFARGLV  313 (347)
T ss_dssp             CCC---HHHHHHHHHHHHTTSC
T ss_pred             CCC---HHHHHHHHHHHHhCCC
Confidence            543   4788999999998864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=5.1e-52  Score=389.97  Aligned_cols=302  Identities=26%  Similarity=0.386  Sum_probs=266.6

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|.++   ...+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            79999999987799999999999999999999999999999999998754   346899999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||+..+..+|+.|.+|++|+++.|.+...   .|.. .+                  |+|+||+++|++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVD-RD------------------GGFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCC-CC------------------CcceeEEEEchHHeEECCCC
Confidence            99999999999999999999999999997653   2221 22                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++||++. ++.|||+++.+..++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ ++.++++
T Consensus       139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~  215 (343)
T 2dq4_A          139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP  215 (343)
T ss_dssp             SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred             CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence            9999999874 778999998657888 999999999999999999999999987799999999999999999 9999998


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh-hhhcc-ccEEEEeeecC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~i~g~~~~~  324 (345)
                      .+  .++.+.+.+++++++|++||++|+..+++.++++++++ |+++.+|...  ...++++ ..++. ++++.|+....
T Consensus       216 ~~--~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~~~i~g~~~~~  290 (343)
T 2dq4_A          216 LE--EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS--DPIRFDLAGELVMRGITAFGIAGRR  290 (343)
T ss_dssp             TT--SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS--SCEEECHHHHTGGGTCEEEECCSCC
T ss_pred             Cc--cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCceeCcHHHHHhCceEEEEeecCC
Confidence            76  57888888888339999999999977799999999997 9999999853  3567787 66666 99999986541


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                        ..++++++++++++|+.
T Consensus       291 --~~~~~~~~~~l~~~g~~  307 (343)
T 2dq4_A          291 --LWQTWMQGTALVYSGRV  307 (343)
T ss_dssp             --TTHHHHHHHHHHHHTSS
T ss_pred             --CHHHHHHHHHHHHcCCC
Confidence              24789999999999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.2e-51  Score=387.47  Aligned_cols=300  Identities=27%  Similarity=0.413  Sum_probs=257.7

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--CCCCCcccCcceeEEEEEeCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      .+|||+++.+++++++++++|.|+|++|||||||.++|||++|++.+.|.++  ...+|.++|||++|+|+++|++ ++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            4699999999987799999999999999999999999999999999998776  3468999999999999999999 999


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEee-cceEEEcC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKID  164 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~iP  164 (345)
                      ++||||+..+..+|+.|.+|+++++++|.+...   .|.. .+                  |+|+||+++| ++.++++ 
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~i-  137 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQT-TN------------------GGFSEYMLVKSSRWLVKL-  137 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEESCGGGEEEE-
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccc-cC------------------CcceeeEEecCcccEEEe-
Confidence            999999888889999999999999999997643   2322 23                  4999999999 9999999 


Q ss_pred             CCCChhhhcccccchhhhhHHHHhh----cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHhc
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNT----AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~----~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      +++++++||.+++++.|||+++...    .++ +|++|||+|+|++|++++|+|+.+  |+ +|++++++++++++++++
T Consensus       138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l  215 (344)
T 2h6e_A          138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL  215 (344)
T ss_dssp             SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH
T ss_pred             CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh
Confidence            9999999999999999999998654    278 999999999999999999999999  99 899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      |+++++++++.    .+.+.+++++ ++|++||++|++.+++.++++++++ |+++.+|....  ..++++..++. +++
T Consensus       216 Ga~~vi~~~~~----~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~  288 (344)
T 2h6e_A          216 GADYVSEMKDA----ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWNKK  288 (344)
T ss_dssp             TCSEEECHHHH----HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTTCE
T ss_pred             CCCEEeccccc----hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCCcE
Confidence            99999876430    2234455656 8999999999986799999999997 99999998542  45677777766 999


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.|+..+.   .++++++++++++|++
T Consensus       289 i~g~~~~~---~~~~~~~~~l~~~g~i  312 (344)
T 2h6e_A          289 LLGSNYGS---LNDLEDVVRLSESGKI  312 (344)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHTTSS
T ss_pred             EEEEecCC---HHHHHHHHHHHHcCCC
Confidence            99987543   4789999999999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.7e-52  Score=395.70  Aligned_cols=307  Identities=19%  Similarity=0.232  Sum_probs=260.8

Q ss_pred             cceeeeeeeeccCCCCeEEEE--eecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 019139            6 QVITCKAAVAWEPNKPLVIED--VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~~~~~~~--~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      .|.+|||+++.+++.++++++  +|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            355799999999986799999  999999999999999999999999999998776557899999999999999999999


Q ss_pred             -CCCCCCEEEec-CcCCCCCCccccCCCCCCCCCc-CCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           84 -EVQPGDHVIPC-YQAECRECKFCKSGKTNLCGKV-RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        84 -~~~~Gd~V~~~-~~~~~~~c~~c~~~~~~~c~~~-~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                       +|++||||++. ...+|+.|.+|++++++.|++. ......  . ..|             ....|+|+||+++|++.+
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~--~-~~g-------------~~~~G~~aey~~v~~~~~  146 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP--Y-EDG-------------YVSQGGYANYVRVHEHFV  146 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB--C-TTS-------------CBCCCSSBSEEEEEGGGE
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccc--c-CCC-------------ccCCCcceeEEEEchhhe
Confidence             99999999654 4578999999999999999875 111000  0 000             111249999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +++|+++++++||++++++.|||+++.. .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus       147 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa  224 (360)
T 1piw_A          147 VPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGA  224 (360)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTC
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCC
Confidence            9999999999999999999999999855 889999999999999999999999999999 79999999999999999999


Q ss_pred             ceEeCCCCCCc-cHHHHHHhhcCCCccEEEEccCC--HHHHHHHHHHhccCCeEEEEeccCCCCCce-ecChhhhcc-cc
Q 019139          241 TEFVNPKDHDK-PIQQVLVDLTDGGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQLVT-GR  315 (345)
Q Consensus       241 ~~~i~~~~~~~-~~~~~~~~~~~gg~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~  315 (345)
                      +.++++.+  . ++.+.+.    +++|++||++|.  +.+++.++++++++ |+++.+|....   . .+++..++. ++
T Consensus       225 ~~v~~~~~--~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~---~~~~~~~~~~~~~~  294 (360)
T 1piw_A          225 DHYIATLE--EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ---HEMLSLKPYGLKAV  294 (360)
T ss_dssp             SEEEEGGG--TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS---SCCEEECGGGCBSC
T ss_pred             CEEEcCcC--chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC---ccccCHHHHHhCCe
Confidence            99998865  3 4444332    589999999998  66688999999997 99999998543   3 456656666 99


Q ss_pred             EEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          316 VWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       316 ~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++.|+..++   .++++++++++++|++
T Consensus       295 ~i~g~~~~~---~~~~~~~~~l~~~g~l  319 (360)
T 1piw_A          295 SISYSALGS---IKELNQLLKLVSEKDI  319 (360)
T ss_dssp             EEEECCCCC---HHHHHHHHHHHHHTTC
T ss_pred             EEEEEecCC---HHHHHHHHHHHHhCCC
Confidence            999987543   4789999999998864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-51  Score=387.47  Aligned_cols=303  Identities=25%  Similarity=0.406  Sum_probs=261.8

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-CCCCC--CCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      ++|||+++.+++. ++++++|.|+|+++||||||.++|||++|++.+. +..+.  ..+|.++|||++|+|+++|++|+.
T Consensus         3 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            3 SDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             -CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            3599999999875 9999999999999999999999999999999887 33321  257999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+..+|+.|.+|++++++.|.+...   .|....+                  |+|+||+++|++.++++|
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~iP  140 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDD------------------GNLARYYVHAADFCHKLP  140 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCC------------------ccceeEEEeChHHeEECc
Confidence            9999999999999999999999999999997653   2221122                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV  244 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i  244 (345)
                      +++++++||.+ .+++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++
T Consensus       141 ~~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~  217 (352)
T 1e3j_A          141 DNVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTL  217 (352)
T ss_dssp             TTSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             CCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEE
Confidence            99999999876 4888999988 78899999999999999999999999999999 699999999999999999999999


Q ss_pred             CCCCCCccHHHHHHhhcC---C-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          245 NPKDHDKPIQQVLVDLTD---G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~---g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      ++++. .++.+.+.+.++   + ++|++||++|+..+++.++++++++ |+++.+|...  ...++++..++. ++++.|
T Consensus       218 ~~~~~-~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g  293 (352)
T 1e3j_A          218 VVDPA-KEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKS  293 (352)
T ss_dssp             ECCTT-TSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEE
T ss_pred             cCccc-ccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccccHHHHHhcCcEEEE
Confidence            88631 345667777665   4 8999999999987799999999997 9999999743  345677777766 999999


Q ss_pred             eeecCCcccccHHHHHHHHhcccc
Q 019139          320 TAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +...    .++++++++++++|+.
T Consensus       294 ~~~~----~~~~~~~~~l~~~g~i  313 (352)
T 1e3j_A          294 VFRY----CNDYPIALEMVASGRC  313 (352)
T ss_dssp             CCSC----SSCHHHHHHHHHTTSC
T ss_pred             eccc----hHHHHHHHHHHHcCCC
Confidence            8643    4679999999999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=6.8e-51  Score=385.14  Aligned_cols=305  Identities=23%  Similarity=0.232  Sum_probs=264.3

Q ss_pred             CCcceeeeeeeeccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCC
Q 019139            4 EGQVITCKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      +++|.+|||+++.+++ +.++++++|.|+|++|||||||.++|||++|++++.|.++. .++|.++|||++|+|+++|++
T Consensus        22 ~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~  101 (363)
T 3uog_A           22 SMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKS  101 (363)
T ss_dssp             -CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTT
T ss_pred             ccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCC
Confidence            3556789999999764 35999999999999999999999999999999999987763 478999999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCC-CceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                      |+.|++||||+..+..      +|+.+. +.|.+...... .|.. .+                  |+|+||+++|++.+
T Consensus       102 v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~~  155 (363)
T 3uog_A          102 VTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGA-HP------------------GVLSEYVVLPEGWF  155 (363)
T ss_dssp             CCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTT-SC------------------CCCBSEEEEEGGGE
T ss_pred             CCCCCCCCEEEEeccc------cccccc-cccccccccccccCcC-CC------------------CcceeEEEechHHe
Confidence            9999999999987543      678888 89975322111 2211 22                  49999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +++|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus       156 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa  234 (363)
T 3uog_A          156 VAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGA  234 (363)
T ss_dssp             EECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC
T ss_pred             EECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCC
Confidence            99999999999999999999999999888999999999999999999999999999999 99999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK  318 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  318 (345)
                      +.+++..+  .++.+.+.+++++ ++|++||++|. ..+..++++++++ |+++.+|... +...++++..++. ++++.
T Consensus       235 ~~vi~~~~--~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~  309 (363)
T 3uog_A          235 DHGINRLE--EDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLE-GFEVSGPVGPLLLKSPVVQ  309 (363)
T ss_dssp             SEEEETTT--SCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCS-SCEECCBTTHHHHTCCEEE
T ss_pred             CEEEcCCc--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCC-CcccCcCHHHHHhCCcEEE
Confidence            99998443  5788899999988 99999999996 4499999999997 9999999854 3456777777777 99999


Q ss_pred             EeeecCCcccccHHHHHHHHhcccc
Q 019139          319 GTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       319 g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |+..+.   .++++++++++++|+.
T Consensus       310 g~~~~~---~~~~~~~~~l~~~g~l  331 (363)
T 3uog_A          310 GISVGH---RRALEDLVGAVDRLGL  331 (363)
T ss_dssp             ECCCCC---HHHHHHHHHHHHHHTC
T ss_pred             EEecCC---HHHHHHHHHHHHcCCC
Confidence            997653   4789999999988863

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2e-51  Score=385.97  Aligned_cols=303  Identities=26%  Similarity=0.379  Sum_probs=267.6

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++++  ++++++|.|+|++|||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            799999999875  899999999999999999999999999999999987654 36899999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||++.+..+|+.|.+|++++++.|.+...   .|+. .+                  |+|+||+++|++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEH-RH------------------GTYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTS-SC------------------CSSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccc---cCcC-CC------------------ccceeEEEeChHHeEECCCC
Confidence            99999999999999999999999999987653   2322 23                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++++||++++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|+++++++++.+.++++|++.+++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d  217 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN  217 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999876678999999999998 9999999999999999 9999999999999999999999988


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +.+  .++.+.+.+.+++ ++|++||++|. ..+..++++++++ |+++.+|.... ...++++..++. ++++.|+..+
T Consensus       218 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          218 YTH--PDWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSG-YEGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TTS--TTHHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCS-CCCCCCTTHHHHTTCEEEECCSC
T ss_pred             CCc--ccHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CcCccCHHHHHhCCcEEEEecCc
Confidence            876  4677788888776 89999999994 5599999999997 99999998543 233466666666 9999998643


Q ss_pred             CCcccccHHHHHHHHhcccc
Q 019139          324 GFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~  343 (345)
                         ..++++++++++++|+.
T Consensus       293 ---~~~~~~~~~~l~~~g~l  309 (343)
T 2eih_A          293 ---SKSRLFPILRFVEEGKL  309 (343)
T ss_dssp             ---CGGGHHHHHHHHHHTSS
T ss_pred             ---cHHHHHHHHHHHHcCCC
Confidence               34789999999998864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=3.5e-51  Score=384.80  Aligned_cols=302  Identities=24%  Similarity=0.348  Sum_probs=269.0

Q ss_pred             eeeeeeccC-CCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEP-NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~-~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++... +..++++|+|.|+|+||||||||.|+|||++|+++++|.++. ++|.++|||++|+|+++|++|+.|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeecccC
Confidence            899998754 345999999999999999999999999999999999998754 589999999999999999999999999


Q ss_pred             CEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        89 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      |||++.+. ..|+.|.+|..+.++.|......   +.. .+                  |+|+||+.+|++.++++|+++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~------------------G~~ae~~~~~~~~~~~iP~~~  137 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA---GYS-VD------------------GGMAEEAIVVADYAVKVPDGL  137 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-BC------------------CSSBSEEEEEGGGSCBCCTTS
T ss_pred             CeEeecccccccCccccccCCccccccccccc---ccc-cC------------------CcceeeccccccceeecCCCC
Confidence            99987665 67889999999999999876642   211 33                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||++++++.|||+++ +..++++|++|+|+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++|++
T Consensus       138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~  216 (348)
T 4eez_A          138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG  216 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred             CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence            9999999999999999987 677889999999999999999999999987655999999999999999999999999998


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      +  .++.+.+.+++++ ++|.++|++++..++..++++++++ |+++.+|...  ....+++..++. +++|.|+..++.
T Consensus       217 ~--~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~~  291 (348)
T 4eez_A          217 D--VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPN--TEMTLSVPTVVFDGVEVAGSLVGTR  291 (348)
T ss_dssp             C--CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCS--CEEEECHHHHHHSCCEEEECCSCCH
T ss_pred             C--CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccC--CCCccCHHHHHhCCeEEEEEecCCH
Confidence            7  6788999999998 9999999999999999999999997 9999999753  456778777777 999999987644


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                         ++++++++++++|++
T Consensus       292 ---~~~~~~~~l~~~g~i  306 (348)
T 4eez_A          292 ---LDLAEAFQFGAEGKV  306 (348)
T ss_dssp             ---HHHHHHHHHHHTTSC
T ss_pred             ---HHHHHHHHHHHcCCC
Confidence               789999999999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-51  Score=387.93  Aligned_cols=310  Identities=25%  Similarity=0.401  Sum_probs=257.3

Q ss_pred             cceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 019139            6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      ..|+|+|+++.+++++++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+.|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            45789999998887789999999999999999999999999999999999876655689999999999999999999999


Q ss_pred             CCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           86 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        86 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      ++||||++.+. ..|+.|.+|++|++++|++.... ..+.....|             ....|+|+||+++|++.++++|
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~g-------------~~~~G~~aeyv~v~~~~~~~~P  164 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGT-YNSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIR  164 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcc-cccccccCC-------------CCCCCcccceEEEcchhEEECC
Confidence            99999998776 57999999999999999975211 000000000             1123599999999999999999


Q ss_pred             CC-CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQ-APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~-l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      ++ +++++||++++++.|||+++.. .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.+
T Consensus       165 ~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~v  242 (369)
T 1uuf_A          165 HPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEV  242 (369)
T ss_dssp             SCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEE
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence            99 9999999999999999999855 589999999999999999999999999999 79999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCce-ecChhhhcc-ccEEEEee
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~~i~g~~  321 (345)
                      +++.+  .++   +.++. +++|++||++|.+.+++.++++++++ |+++.+|....  .. ++++..++. ++++.|+.
T Consensus       243 i~~~~--~~~---~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~i~g~~  313 (369)
T 1uuf_A          243 VNSRN--ADE---MAAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPAT--PHKSPEVFNLIMKRRAIAGSM  313 (369)
T ss_dssp             EETTC--HHH---HHTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC---------CHHHHHTTTCEEEECC
T ss_pred             ecccc--HHH---HHHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCC--CccccCHHHHHhCCcEEEEee
Confidence            98875  332   23333 58999999999876689999999997 99999998542  23 567777766 99999987


Q ss_pred             ecCCcccccHHHHHHHHhcccc
Q 019139          322 FGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      .+.   .+++.++++++++|++
T Consensus       314 ~~~---~~~~~~~~~l~~~g~i  332 (369)
T 1uuf_A          314 IGG---IPETQEMLDFCAEHGI  332 (369)
T ss_dssp             SCC---HHHHHHHHHHHHHHTC
T ss_pred             cCC---HHHHHHHHHHHHhCCC
Confidence            653   3678999999998864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.2e-51  Score=387.74  Aligned_cols=298  Identities=17%  Similarity=0.227  Sum_probs=258.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCC---CcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~---p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            799999999888999999999999999999999999999999999987654456   8999999999 9999999 9999


Q ss_pred             CCCEEEecCcCC--CCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           87 PGDHVIPCYQAE--CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        87 ~Gd~V~~~~~~~--~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +||||+..+...  |+.|.+|++++++.|.+..... .|....+                  |+|+||+++|++.++++|
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~------------------G~~aey~~v~~~~~~~iP  139 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAH------------------GYMSEFFTSPEKYLVRIP  139 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEEC------------------CSCBSEEEEEGGGEEECC
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCC------------------cceeeEEEEchHHeEECC
Confidence            999999988877  9999999999999999765310 0221123                  399999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCC------CEEEEEcCChHHHHH-HHHH-HHcCCCeEEEEcCChh---HHH
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG------SIVAVFGLGTVGLAV-AEGA-KAAGASRVIGIDIDPK---KFD  233 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g------~~VlI~Gag~vG~~a-~q~a-~~~G~~~vi~~~~~~~---~~~  233 (345)
                      ++++ ++ |+++.+++|||+++ +..++++|      ++|+|+|+|++|+++ +|+| +.+|+++|++++++++   +++
T Consensus       140 ~~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~  216 (357)
T 2b5w_A          140 RSQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID  216 (357)
T ss_dssp             GGGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred             CCcc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence            9999 54 55777999999998 77888999      999999999999999 9999 9999955999999998   999


Q ss_pred             HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhh--
Q 019139          234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL--  311 (345)
Q Consensus       234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~--  311 (345)
                      +++++|++++ ++++  .++.+ +.++ ++++|++||++|++.++..++++++++ |+++.+|.... ...++++..+  
T Consensus       217 ~~~~lGa~~v-~~~~--~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~  289 (357)
T 2b5w_A          217 IIEELDATYV-DSRQ--TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHR  289 (357)
T ss_dssp             HHHHTTCEEE-ETTT--SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHH
T ss_pred             HHHHcCCccc-CCCc--cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhH
Confidence            9999999988 8775  45666 6666 559999999999987799999999997 99999998642 4567777776  


Q ss_pred             --cc-ccEEEEeeecCCcccccHHHHHHHHhcc
Q 019139          312 --VT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       312 --~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g  341 (345)
                        +. ++++.|+..+.   .++++++++++++|
T Consensus       290 ~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g  319 (357)
T 2b5w_A          290 EMVLHNKALVGSVNSH---VEHFEAATVTFTKL  319 (357)
T ss_dssp             HHHHTTCEEEECCCCC---HHHHHHHHHHHHHS
T ss_pred             HHHhCCeEEEEeccCC---HHHHHHHHHHHHhC
Confidence              55 99999987653   47899999999988

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=8.8e-51  Score=389.62  Aligned_cols=307  Identities=23%  Similarity=0.312  Sum_probs=265.1

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCC-CCCCeEEEEEeeeecCccccccccCCC------C-CCCCCcccCcceeEEEE
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVE   76 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~Vv   76 (345)
                      +.+.+|+++++..++. ++++++|.|+ |++|||||||.++|||++|++++.|..      + ..++|.++|||++|+|+
T Consensus        26 ~~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           26 EGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             TTTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            3445566666665554 8999999999 999999999999999999999987642      1 23689999999999999


Q ss_pred             EeCCCC------CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139           77 SVGEGV------TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS  150 (345)
Q Consensus        77 ~~G~~v------~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a  150 (345)
                      ++|++|      +.|++||||+..+..+|+.|.+|++|+++.|.+...   .|+. .+                  |+|+
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~a  162 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFN-VD------------------GAFA  162 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSB
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCC-CC------------------CCCc
Confidence            999999      889999999999999999999999999999998764   3332 33                  4999


Q ss_pred             eeEEeecceEEEcCCCCC------hhhhcccccchhhhhHHHHhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 019139          151 QYTVVHDVSVAKIDPQAP------LDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVI  223 (345)
Q Consensus       151 ~~~~v~~~~~~~iP~~l~------~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi  223 (345)
                      ||+++|++.++++|++++      +.++|+++.+++|||+++... .++++|++|||+|+|++|++++|+|+.+|+.+|+
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi  242 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVI  242 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            999999999999999886      455888888999999998655 4899999999999999999999999999998899


Q ss_pred             EEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHh----ccCCeEEEEecc
Q 019139          224 GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECC----HKGWGTSVIVGV  297 (345)
Q Consensus       224 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l----~~~~G~~v~~G~  297 (345)
                      +++++++++++++++|+++++++.+  .++.+.+.+++++ ++|++||++|++ .++..++++|    +++ |+++.+|.
T Consensus       243 ~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~  319 (404)
T 3ip1_A          243 LSEPSEVRRNLAKELGADHVIDPTK--ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVAR  319 (404)
T ss_dssp             EECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSC
T ss_pred             EECCCHHHHHHHHHcCCCEEEcCCC--CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCC
Confidence            9999999999999999999999877  6788999999988 999999999997 3577788888    997 99999998


Q ss_pred             CCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcc
Q 019139          298 AASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKK  341 (345)
Q Consensus       298 ~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g  341 (345)
                      ...  ..++++..++. ++++.|+....  ..++++++++++++|
T Consensus       320 ~~~--~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g  360 (404)
T 3ip1_A          320 ADA--KIPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG  360 (404)
T ss_dssp             CCS--CEEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT
T ss_pred             CCC--CCcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC
Confidence            643  46788888877 99999997532  247889999999988

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=9.9e-51  Score=383.20  Aligned_cols=310  Identities=23%  Similarity=0.300  Sum_probs=260.2

Q ss_pred             CCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 019139            4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +..+|+|+++++.++.++++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|+
T Consensus         4 m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            4 MEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             --CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCC
T ss_pred             ccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCC
Confidence            44568999999998877799999999999999999999999999999999998766556899999999999999999999


Q ss_pred             CCCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           84 EVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        84 ~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      +|++||||++.+. .+|+.|.+|++++++.|.+.... ..+.. .             .+....|+|+||+++|++.+++
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~-------------~g~~~~G~~aey~~v~~~~~~~  148 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS-YNDVY-I-------------NGQPTQGGFAKATVVHQKFVVK  148 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-TTSBC-T-------------TSCBCCCSSBSCEEEEGGGEEE
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccc-ccccc-c-------------CCCCCCCccccEEEechhhEEE
Confidence            9999999987554 68999999999999999754321 01000 0             0112235999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCC
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV  240 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~-~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~  240 (345)
                      +|+++++++||++++++.|||+++. ..+++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|+
T Consensus       149 ~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa  226 (357)
T 2cf5_A          149 IPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA  226 (357)
T ss_dssp             CCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC
T ss_pred             CcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC
Confidence            9999999999999999999999874 56788 99999999999999999999999999 8999999999999888 9999


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-ccEEE
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWK  318 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~  318 (345)
                      ++++++.+  .   +.+.+.+ +++|++||++|.+.+++.++++++++ |+++.+|....  ... +++. ++. ++++.
T Consensus       227 ~~vi~~~~--~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~-~~~~~~~i~  296 (357)
T 2cf5_A          227 DDYVIGSD--Q---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINN--PLQFLTPL-LMLGRKVIT  296 (357)
T ss_dssp             SCEEETTC--H---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSS--CCCCCHHH-HHHHTCEEE
T ss_pred             ceeecccc--H---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCC--CccccCHH-HHhCccEEE
Confidence            99998865  2   3455554 48999999999865689999999997 99999998542  233 5555 555 99999


Q ss_pred             EeeecCCcccccHHHHHHHHhcccc
Q 019139          319 GTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       319 g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |+..+.   .++++++++++++|++
T Consensus       297 g~~~~~---~~~~~~~~~l~~~g~l  318 (357)
T 2cf5_A          297 GSFIGS---MKETEEMLEFCKEKGL  318 (357)
T ss_dssp             ECCSCC---HHHHHHHHHHHHHTTC
T ss_pred             EEccCC---HHHHHHHHHHHHcCCC
Confidence            987653   4688999999988864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.1e-50  Score=381.41  Aligned_cols=301  Identities=25%  Similarity=0.359  Sum_probs=265.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--------CCCCCcccCcceeEEEEEeCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      |||+++.+++.+++++++|.|+|++|||||||.++|||++|++++.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            79999999987799999999999999999999999999999999988655        2368999999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec-ceE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV  160 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~  160 (345)
                      |++|++||||+..+..+|+.|.+|+++++++|++...   .|.. .+                  |+|+||+++|+ +.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FD------------------GAYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BC------------------CSSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---cccc-CC------------------CcceeEEEecCccce
Confidence            9999999999888889999999999999999987643   2322 23                  49999999999 999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhc
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      +++ +++++++||.+++++.|||+++ ...+++++++|+|+|+ |++|++++|+++.. |+ +|+++++++++.+.++++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~  215 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA  215 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence            999 9999999999999999999988 4588999999999998 59999999999999 99 899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      |++.++++.+  .++.+.+.+++. +++|++||++|.+.+++.++++++++ |+++.+|....+ . ++++..++. +++
T Consensus       216 g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~-~~~~~~~~~~~~~  290 (347)
T 1jvb_A          216 GADYVINASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD-L-HYHAPLITLSEIQ  290 (347)
T ss_dssp             TCSEEEETTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC-C-CCCHHHHHHHTCE
T ss_pred             CCCEEecCCC--ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-C-CCCHHHHHhCceE
Confidence            9999998876  567777777776 58999999999987799999999997 999999985422 3 677777766 999


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.|+..+.   .++++++++++++|++
T Consensus       291 i~g~~~~~---~~~~~~~~~l~~~g~l  314 (347)
T 1jvb_A          291 FVGSLVGN---QSDFLGIMRLAEAGKV  314 (347)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHTTSS
T ss_pred             EEEEeccC---HHHHHHHHHHHHcCCC
Confidence            99987543   4788999999998864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.8e-50  Score=386.82  Aligned_cols=309  Identities=21%  Similarity=0.277  Sum_probs=263.1

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCC-CC-----CeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPP-QA-----GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~-~~-----~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +|||+++.+++. ++++++|.|+| ++     +||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            599999999875 99999999998 68     9999999999999999999998643 3679999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCC-----CCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA-----TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~-----~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      +.|++||||++.+...|+.|.+|+++++++|.+....     ...|.. .               ....|+|+||+++|+
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~-~---------------~~~~G~~aey~~v~~  143 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD-L---------------KGWSGGQAEYVLVPY  143 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT-B---------------SSCCCSSBSEEEESS
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc-c---------------CCCCceeeeeEEecc
Confidence            9999999999999999999999999999999872110     001110 0               001259999999998


Q ss_pred             c--eEEEcCCCCChhh----hcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          158 V--SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       158 ~--~~~~iP~~l~~~~----aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      +  .++++|+++++++    ||+++++++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++
T Consensus       144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  222 (398)
T 2dph_A          144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER  222 (398)
T ss_dssp             HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            7  8999999999998    888999999999998 78899999999999999999999999999998789999999999


Q ss_pred             HHHHHhcCCceEeCCCCCCccH-HHHHHhhcCC-CccEEEEccCCHH--------------HHHHHHHHhccCCeEEEEe
Q 019139          232 FDRAKNFGVTEFVNPKDHDKPI-QQVLVDLTDG-GVDYSFECIGNVS--------------VMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       232 ~~~~~~~g~~~~i~~~~~~~~~-~~~~~~~~~g-g~d~v~d~~g~~~--------------~~~~~~~~l~~~~G~~v~~  295 (345)
                      +++++++|++ ++++.+  .++ .+.+.+++++ ++|++||++|+..              ++..++++++++ |+++++
T Consensus       223 ~~~a~~lGa~-~i~~~~--~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~  298 (398)
T 2dph_A          223 LKLLSDAGFE-TIDLRN--SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP  298 (398)
T ss_dssp             HHHHHTTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred             HHHHHHcCCc-EEcCCC--cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence            9999999996 888875  454 7788888888 8999999999752              689999999997 999999


Q ss_pred             ccCCC-----------CCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          296 GVAAS-----------GQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       296 G~~~~-----------~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |....           ...+++++..++. ++++.|+...   ..++++++++++++|++
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l  355 (398)
T 2dph_A          299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQM  355 (398)
T ss_dssp             SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCC
T ss_pred             ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCC
Confidence            97521           2345677767666 9999987543   34678999999998864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.9e-49  Score=375.66  Aligned_cols=308  Identities=23%  Similarity=0.369  Sum_probs=258.8

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +|+|+++...+.++.++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|++|++|+
T Consensus        14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCC
Confidence            46677777766666699999999999999999999999999999999988766556899999999999999999999999


Q ss_pred             CCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           87 PGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        87 ~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      +||||++.+. .+|+.|.+|+.++++.|...... ..|.. ..|             ....|+|+||+++|++.++++|+
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~  158 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIY-HDG-------------TITYGGYSNHMVANERYIIRFPD  158 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEES-SSSBC-TTS-------------CBCCCSSBSEEEEEGGGCEECCT
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCccccc-ccccc-cCC-------------CcCCCccccEEEEchhhEEECCC
Confidence            9999987654 68999999999999999655321 01100 001             11235999999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF  243 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~-~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~  243 (345)
                      ++++++||++++++.|||+++. ..+++ +|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.+
T Consensus       159 ~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v  236 (366)
T 1yqd_A          159 NMPLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSF  236 (366)
T ss_dssp             TSCTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEE
T ss_pred             CCCHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceE
Confidence            9999999999999999999884 45777 99999999999999999999999999 8999999999998877 8999999


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      +++.+  .   +.+.+.+ +++|++||++|...+++.++++++++ |+++.+|....  ..++++..++. ++++.|+..
T Consensus       237 ~~~~~--~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~  307 (366)
T 1yqd_A          237 LVSRD--Q---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGRKIVAGSGI  307 (366)
T ss_dssp             EETTC--H---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTTCEEEECCS
T ss_pred             EeccC--H---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCCcEEEEecC
Confidence            98865  2   3455555 48999999999865689999999997 99999998542  45677777777 999999876


Q ss_pred             cCCcccccHHHHHHHHhcccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.   .+++.++++++++|++
T Consensus       308 ~~---~~~~~~~~~l~~~g~l  325 (366)
T 1yqd_A          308 GG---MKETQEMIDFAAKHNI  325 (366)
T ss_dssp             CC---HHHHHHHHHHHHHTTC
T ss_pred             CC---HHHHHHHHHHHHcCCC
Confidence            53   3678899999988864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.1e-50  Score=381.90  Aligned_cols=311  Identities=24%  Similarity=0.309  Sum_probs=260.7

Q ss_pred             eeeeeeeccCCCCeEEEEeecCCCC-CCe------EEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139            9 TCKAAVAWEPNKPLVIEDVQVAPPQ-AGE------VRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         9 ~~~a~~~~~~~~~~~~~~~~~p~~~-~~e------VlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      +|||+++.+++. ++++++|.|+|. ++|      |||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            599999998875 999999999997 898      99999999999999999998653 357899999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCC---CCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      |+.|++||||++.+..+|+.|.+|++|++++|.+.....   ..|+...               ....|+|+||+++|++
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------------~~~~G~~aey~~v~~~  144 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDM---------------GDWTGGQAEYVLVPYA  144 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTS---------------CCBCCCSBSEEEESSH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccC---------------CCCCceeeeEEEecch
Confidence            999999999999888999999999999999998764210   0111000               0012599999999986


Q ss_pred             --eEEEcCCCCChhh----hcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          159 --SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       159 --~~~~iP~~l~~~~----aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                        .++++|+++++.+    +|++++++.|||+++. ..++++|++|||+|+|++|++++|+||.+|+++|++++++++++
T Consensus       145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             hCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence              8999999999888    7888889999999984 78999999999999999999999999999997799999999999


Q ss_pred             HHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCH---------------HHHHHHHHHhccCCeEEEEec
Q 019139          233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV---------------SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       233 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~---------------~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ++++++|++ ++++.+. .++.+.+.+++++ ++|++||++|+.               .++..++++++++ |+++.+|
T Consensus       224 ~~a~~lGa~-~i~~~~~-~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G  300 (398)
T 1kol_A          224 AHAKAQGFE-IADLSLD-TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPG  300 (398)
T ss_dssp             HHHHHTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECS
T ss_pred             HHHHHcCCc-EEccCCc-chHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEec
Confidence            999999997 7887652 3477888888887 899999999975               2689999999997 9999999


Q ss_pred             cCCCC-----------CceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          297 VAASG-----------QEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       297 ~~~~~-----------~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ....+           ..+++++..++. ++++.|+...   ..++++++++++++|++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l  356 (398)
T 1kol_A          301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRI  356 (398)
T ss_dssp             CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSC
T ss_pred             cccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCC
Confidence            75211           134566666666 9999886422   34667889999998864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=3e-49  Score=384.62  Aligned_cols=312  Identities=19%  Similarity=0.203  Sum_probs=264.5

Q ss_pred             CCCcceeeeeeeeccC---------------CCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC---------
Q 019139            3 TEGQVITCKAAVAWEP---------------NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---------   58 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~---------------~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---------   58 (345)
                      +++.|.+|||+++.++               +++++++++|.|+|++|||||||.++|||++|++...+..         
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            3467889999999987               2459999999999999999999999999999987653321         


Q ss_pred             ----C----CCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCc
Q 019139           59 ----P----EGLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR  129 (345)
Q Consensus        59 ----~----~~~~p-~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g  129 (345)
                          .    ...+| .++|||++|+|+++|++|+.|++||+|++.+. .|..|..|..+..+.|.+...   .|+...+ 
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~~-  178 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETNF-  178 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSSS-
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCCC-
Confidence                0    12467 69999999999999999999999999998654 677888999999999987764   2322122 


Q ss_pred             ccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhh--cCCCCCCEEEEEcC-ChH
Q 019139          130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTV  206 (345)
Q Consensus       130 ~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VlI~Ga-g~v  206 (345)
                                       |+|+||+++|++.++++|+++++++||++++++.|||+++...  .++++|++|+|+|+ |++
T Consensus       179 -----------------G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~v  241 (456)
T 3krt_A          179 -----------------GGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGL  241 (456)
T ss_dssp             -----------------CSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHH
T ss_pred             -----------------CcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHH
Confidence                             4999999999999999999999999999999999999998654  78999999999998 999


Q ss_pred             HHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCc---------------cHHHHHHhhcCC-CccEEEE
Q 019139          207 GLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK---------------PIQQVLVDLTDG-GVDYSFE  270 (345)
Q Consensus       207 G~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---------------~~~~~~~~~~~g-g~d~v~d  270 (345)
                      |++++|+|+.+|+ ++++++++++++++++++|++.++++.+.+.               .+.+.+.+++++ ++|++||
T Consensus       242 G~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid  320 (456)
T 3krt_A          242 GSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFE  320 (456)
T ss_dssp             HHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred             HHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEE
Confidence            9999999999999 8888889999999999999999999876321               234778888887 9999999


Q ss_pred             ccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++|+ .++..++++++++ |+++.+|... +...+++...++. +++|.|+..+.+   +++.++++++++|++
T Consensus       321 ~~G~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l  388 (456)
T 3krt_A          321 HPGR-ETFGASVFVTRKG-GTITTCASTS-GYMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRI  388 (456)
T ss_dssp             CSCH-HHHHHHHHHEEEE-EEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSS
T ss_pred             cCCc-hhHHHHHHHhhCC-cEEEEEecCC-CcccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCc
Confidence            9998 5699999999997 9999999854 4466777777777 999999987654   567788899988864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=6.3e-49  Score=381.56  Aligned_cols=312  Identities=18%  Similarity=0.216  Sum_probs=261.1

Q ss_pred             CCCcceeeeeeeeccCC-------------CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc--------------
Q 019139            3 TEGQVITCKAAVAWEPN-------------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS--------------   55 (345)
Q Consensus         3 ~~~~~~~~~a~~~~~~~-------------~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~--------------   55 (345)
                      +++.|.+|||+++.+++             ++++++++|.|+|++|||||||.++|||++|++...              
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            45678999999999987             349999999999999999999999999999985432              


Q ss_pred             --CCCCC-CCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCccc
Q 019139           56 --GKDPE-GLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKS  131 (345)
Q Consensus        56 --g~~~~-~~~p-~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~  131 (345)
                        |.++. ..+| .++|||++|+|+++|++|++|++||||++.+..+|+.|. |..+..+.|.+...   .|+...+   
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~~---  170 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETNF---  170 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSSS---
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCCC---
Confidence              22211 2466 699999999999999999999999999999988888776 55578899987654   3332112   


Q ss_pred             ccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHh--hcCCCCCCEEEEEcC-ChHHH
Q 019139          132 RFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGL  208 (345)
Q Consensus       132 ~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VlI~Ga-g~vG~  208 (345)
                                     |+|+||+++|++.++++|+++++++||+++++++|||+++..  ..++++|++|||+|+ |++|+
T Consensus       171 ---------------G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~  235 (447)
T 4a0s_A          171 ---------------GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGS  235 (447)
T ss_dssp             ---------------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred             ---------------CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHH
Confidence                           499999999999999999999999999999999999999864  388999999999998 99999


Q ss_pred             HHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC----------------ccHHHHHHhhcCCCccEEEEcc
Q 019139          209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       209 ~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~----------------~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +++|+|+.+|+ +|++++++++++++++++|++.++++.+.+                ..+.+.+.+.+++++|++||++
T Consensus       236 ~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~  314 (447)
T 4a0s_A          236 YAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHT  314 (447)
T ss_dssp             HHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECS
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECC
Confidence            99999999999 888888999999999999999998765411                0125677777844999999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      |.. .+..++++++++ |+++.+|... +....++...++. ++++.|+..+..   +++.++++++++|++
T Consensus       315 G~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l  380 (447)
T 4a0s_A          315 GRV-TFGLSVIVARRG-GTVVTCGSSS-GYLHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAV  380 (447)
T ss_dssp             CHH-HHHHHHHHSCTT-CEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSS
T ss_pred             Cch-HHHHHHHHHhcC-CEEEEEecCC-CcccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCc
Confidence            985 589999999997 9999999854 4456777777777 999999976543   677888899988864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=7.6e-48  Score=362.94  Aligned_cols=287  Identities=17%  Similarity=0.175  Sum_probs=251.0

Q ss_pred             CCCCcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEe
Q 019139            2 STEGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESV   78 (345)
Q Consensus         2 ~~~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~   78 (345)
                      ++++.|.+|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++.. .+|.++|||++|+|+++
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~v  100 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGV  100 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEE
T ss_pred             ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEE
Confidence            34567889999999998765  9999999999999999999999999999999999987654 57999999999999999


Q ss_pred             CCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      |+++++|++||||+...                               .+                  |+|+||+++|++
T Consensus       101 G~~v~~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~  131 (353)
T 4dup_A          101 GPGVSGYAVGDKVCGLA-------------------------------NG------------------GAYAEYCLLPAG  131 (353)
T ss_dssp             CTTCCSCCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGG
T ss_pred             CCCCCCCCCCCEEEEec-------------------------------CC------------------CceeeEEEEcHH
Confidence            99999999999997432                               22                  399999999999


Q ss_pred             eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       159 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      .++++|+++++++||+++++++|||+++.+..++++|++|+|+|+ |++|++++|+|+..|+ +|+++++++++++.+++
T Consensus       132 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~  210 (353)
T 4dup_A          132 QILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACER  210 (353)
T ss_dssp             GEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence            999999999999999999999999999988999999999999965 9999999999999999 89999999999999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCcee-cChhhhcc-cc
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GR  315 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~  315 (345)
                      +|++.++++.+  .++.+.+.+.+++++|++||++|++. +..++++++++ |+++.+|.... .... +++..++. ++
T Consensus       211 lGa~~~~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~  285 (353)
T 4dup_A          211 LGAKRGINYRS--EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAFLGG-AVAEKVNLSPIMVKRL  285 (353)
T ss_dssp             HTCSEEEETTT--SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCCTTC-SEEEEEECHHHHHTTC
T ss_pred             cCCCEEEeCCc--hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEecCC-CcccCCCHHHHHhcCc
Confidence            99999999877  67888888888449999999999865 89999999997 99999998643 3334 77777776 99


Q ss_pred             EEEEeeecCCcccc-------cHHHHHHHHhcccc
Q 019139          316 VWKGTAFGGFKSRS-------QVPWLVDKYMKKVN  343 (345)
Q Consensus       316 ~i~g~~~~~~~~~~-------~~~~~~~~~~~g~~  343 (345)
                      ++.|+.++.+...+       .++++++++++|+.
T Consensus       286 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  320 (353)
T 4dup_A          286 TVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTV  320 (353)
T ss_dssp             EEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSS
T ss_pred             eEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCc
Confidence            99999877653211       16778888888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.1e-48  Score=368.45  Aligned_cols=297  Identities=19%  Similarity=0.237  Sum_probs=249.2

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCC-CeEEEEEeeeecCccccccccC--CCCCCCC---CcccCcceeEEEEEeCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSG--KDPEGLF---PCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g--~~~~~~~---p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      |||+++.+++++++++++|.|+|++ +||||||.++|||++|++++.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999988779999999999999 9999999999999999999998  5543456   99999999999999  66 8


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      +|++||||+..+..+|+.|.+|++|++++|++.... ..|....+                  |+|+||+++|++.++++
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~g~~~~~------------------G~~aey~~v~~~~~~~i  138 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG-EAGIHKMD------------------GFMREWWYDDPKYLVKI  138 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCE-EETTBEEC------------------CSCBSEEEECGGGEEEE
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcc-cCCccCCC------------------CceeEEEEechHHeEEC
Confidence            899999999999999999999999999999976531 00211012                  49999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHH--h--hcCCC--C-------CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVW--N--TAKVE--P-------GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-  229 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~--~--~~~~~--~-------g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~-  229 (345)
                      |++++ ++|+ ++.++.|||+++.  +  ..+++  +       |++|+|+|+|++|++++|+|+.+|+ +|+++++++ 
T Consensus       139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~  215 (366)
T 2cdc_A          139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREP  215 (366)
T ss_dssp             CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCC
T ss_pred             cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCcc
Confidence            99999 7765 6679999999986  4  77888  8       9999999999999999999999999 999999998 


Q ss_pred             --hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHH-HHHHHHhccCCeEEEEeccCCCCCceec
Q 019139          230 --KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVAASGQEIST  306 (345)
Q Consensus       230 --~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~-~~~~~~l~~~~G~~v~~G~~~~~~~~~~  306 (345)
                        ++.++++++|++.+ + .+   ++.+.+.+ +.+++|++||++|++..+ +.+++.++++ |+++.+|.... ...++
T Consensus       216 ~~~~~~~~~~~ga~~v-~-~~---~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~  287 (366)
T 2cdc_A          216 TEVEQTVIEETKTNYY-N-SS---NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTS-GSVPL  287 (366)
T ss_dssp             CHHHHHHHHHHTCEEE-E-CT---TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCS-CEEEE
T ss_pred             chHHHHHHHHhCCcee-c-hH---HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCC-Ccccc
Confidence              89999999999887 6 43   44455555 446899999999987668 9999999997 99999998543 33667


Q ss_pred             Chhh---hcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          307 RPFQ---LVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       307 ~~~~---~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ++..   ++. ++++.|+..+   ..++++++++++++|+
T Consensus       288 ~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~  324 (366)
T 2cdc_A          288 DYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWK  324 (366)
T ss_dssp             EHHHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHHH
T ss_pred             ChhhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcCC
Confidence            7766   666 9999998654   3478899999999886

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=9.9e-47  Score=352.69  Aligned_cols=285  Identities=25%  Similarity=0.301  Sum_probs=248.1

Q ss_pred             CCCCCcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEe
Q 019139            1 MSTEGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV   78 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~   78 (345)
                      |++ +.|.+|||+++.+++++  ++++++|.|+|++|||||||.++|||++|++++.|.++ .++|.++|||++|+|+++
T Consensus         1 M~~-~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            1 MKC-TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             -----CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEE
T ss_pred             CCC-CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEE
Confidence            553 46788999999998876  89999999999999999999999999999999998775 358999999999999999


Q ss_pred             CCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEee-c
Q 019139           79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-D  157 (345)
Q Consensus        79 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~  157 (345)
                      |+++++|++||||+..                                .+                  |+|+||++++ .
T Consensus        79 G~~v~~~~~GdrV~~~--------------------------------~~------------------G~~aey~~v~~~  108 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYI--------------------------------SN------------------STFAQYSKISSQ  108 (334)
T ss_dssp             CTTCCSCCTTCEEEEE--------------------------------CS------------------SCSBSEEEEETT
T ss_pred             CCCCCCCCCCCEEEEe--------------------------------eC------------------CcceEEEEecCc
Confidence            9999999999999843                                12                  4999999999 9


Q ss_pred             ceEEEcCCCCChhh---hcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139          158 VSVAKIDPQAPLDK---VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD  233 (345)
Q Consensus       158 ~~~~~iP~~l~~~~---aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~  233 (345)
                      +.++++|+++++++   ||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus       109 ~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          109 GPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLK  187 (334)
T ss_dssp             SSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred             ceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            99999999999999   88888899999999988889999999999995 9999999999999999 8999999999999


Q ss_pred             HHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc
Q 019139          234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV  312 (345)
Q Consensus       234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~  312 (345)
                      +++++|++.++++.+  .++.+.+.+.+++ ++|++||++|+ ..+..++++++++ |+++.+|... +....++...++
T Consensus       188 ~~~~~ga~~~~~~~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~  262 (334)
T 3qwb_A          188 IAKEYGAEYLINASK--EDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNAS-GLIPPFSITRLS  262 (334)
T ss_dssp             HHHHTTCSEEEETTT--SCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTT-CCCCCBCGGGGT
T ss_pred             HHHHcCCcEEEeCCC--chHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCC-CCCCCcchhhhh
Confidence            999999999999887  6788899998877 99999999998 4599999999997 9999999854 334467777777


Q ss_pred             c-ccEEEEeeecCCc-ccc----cHHHHHHHHhcccc
Q 019139          313 T-GRVWKGTAFGGFK-SRS----QVPWLVDKYMKKVN  343 (345)
Q Consensus       313 ~-~~~i~g~~~~~~~-~~~----~~~~~~~~~~~g~~  343 (345)
                      . ++++.|+.++++. ..+    .++++++++++|+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  299 (334)
T 3qwb_A          263 PKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKL  299 (334)
T ss_dssp             TTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             hCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCc
Confidence            6 9999988765542 222    34688888888864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=5e-47  Score=355.84  Aligned_cols=281  Identities=23%  Similarity=0.258  Sum_probs=239.8

Q ss_pred             CCcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCC
Q 019139            4 EGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE   80 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~   80 (345)
                      ++.|.+|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        16 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~   95 (342)
T 4eye_A           16 TQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPE   95 (342)
T ss_dssp             --CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCT
T ss_pred             ccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECC
Confidence            467899999999998766  999999999999999999999999999999999998754 37899999999999999999


Q ss_pred             CCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        81 ~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                      +++ |++||||+...                               .+                  |+|+||+++|++.+
T Consensus        96 ~v~-~~vGDrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~  125 (342)
T 4eye_A           96 GSG-IKPGDRVMAFN-------------------------------FI------------------GGYAERVAVAPSNI  125 (342)
T ss_dssp             TSS-CCTTCEEEEEC-------------------------------SS------------------CCSBSEEEECGGGE
T ss_pred             CCC-CCCCCEEEEec-------------------------------CC------------------CcceEEEEEcHHHe
Confidence            999 99999998532                               22                  39999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG  239 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g  239 (345)
                      +++|+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       126 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  204 (342)
T 4eye_A          126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG  204 (342)
T ss_dssp             EECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC
Confidence            9999999999999999999999999988999999999999998 9999999999999999 9999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEE
Q 019139          240 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW  317 (345)
Q Consensus       240 ~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  317 (345)
                      ++.++++.   .++.+.+.+.+++ ++|++||++|++. +..++++++++ |+++.+|.... ....+++..++. ++++
T Consensus       205 a~~v~~~~---~~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i  278 (342)
T 4eye_A          205 ADIVLPLE---EGWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVVGFAAG-GIPTIKVNRLLLRNASL  278 (342)
T ss_dssp             CSEEEESS---TTHHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC-----------CCCCGGGTTCEE
T ss_pred             CcEEecCc---hhHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEEEccCC-CCCccCHHHHhhcCCEE
Confidence            99999886   4678888899888 9999999999864 89999999997 99999997543 334566666666 9999


Q ss_pred             EEeeecCCc------ccccHHHHHHHHhcc
Q 019139          318 KGTAFGGFK------SRSQVPWLVDKYMKK  341 (345)
Q Consensus       318 ~g~~~~~~~------~~~~~~~~~~~~~~g  341 (345)
                      .|+..+.+.      ..+++.++++++++|
T Consensus       279 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g  308 (342)
T 4eye_A          279 IGVAWGEFLRTHADYLYETQAGLEKLVAEG  308 (342)
T ss_dssp             EECCHHHHHHHCTTHHHHHHHHHHHHHHTT
T ss_pred             EEEehhhhhhcCHHHHHHHHHHHHHHHHcC
Confidence            999865431      124577788888776

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.6e-46  Score=351.11  Aligned_cols=280  Identities=23%  Similarity=0.263  Sum_probs=240.9

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC--CCCCcccCcceeEEEEEeCCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |.+|||+++.+++++++++++|.|+|++|||||||.++|||++|++++.|..+.  ..+|.++|||++|+|+++|+++++
T Consensus         5 ~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   84 (343)
T 3gaz_A            5 TPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDS   84 (343)
T ss_dssp             -CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             chhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCC
Confidence            568999999999988999999999999999999999999999999999887532  468999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+....                          |....+                  |+|+||+++|++.++++|
T Consensus        85 ~~vGdrV~~~~~--------------------------g~~~~~------------------G~~aey~~v~~~~~~~~P  120 (343)
T 3gaz_A           85 FRVGDAVFGLTG--------------------------GVGGLQ------------------GTHAQFAAVDARLLASKP  120 (343)
T ss_dssp             CCTTCEEEEECC--------------------------SSTTCC------------------CSSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEEeC--------------------------CCCCCC------------------cceeeEEEecHHHeeeCC
Confidence            999999985321                          000022                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      +++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|++. 
T Consensus       121 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-  197 (343)
T 3gaz_A          121 AALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-  197 (343)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-
T ss_pred             CCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-
Confidence            999999999999999999999988999999999999995 9999999999999999 89998 8899999999999998 


Q ss_pred             eCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++ .+  .++.+.+.+.+++ ++|++||++|++ .+..++++++++ |+++.+|...     .++...+.. ++++.|+.
T Consensus       198 i~-~~--~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~~~~~~~g~~  267 (343)
T 3gaz_A          198 ID-AS--REPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAVKRF-GHVVSCLGWG-----THKLAPLSFKQATYSGVF  267 (343)
T ss_dssp             EE-TT--SCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHEEEE-EEEEESCCCS-----CCCCHHHHHTTCEEEECC
T ss_pred             ec-cC--CCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHHhcC-CeEEEEcccC-----ccccchhhhcCcEEEEEE
Confidence            77 43  5678888888887 999999999984 599999999997 9999999753     345555655 99999986


Q ss_pred             ecCC--------cccccHHHHHHHHhcccc
Q 019139          322 FGGF--------KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       322 ~~~~--------~~~~~~~~~~~~~~~g~~  343 (345)
                      ....        ...++++++++++++|++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  297 (343)
T 3gaz_A          268 TLHTLLANEGLAHFGEMLREADALVQTGKL  297 (343)
T ss_dssp             TTHHHHHTCSHHHHHHHHHHHHHHHHTTCC
T ss_pred             eccchhcccchHHHHHHHHHHHHHHHCCCc
Confidence            4311        012568889999988864

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=5.2e-46  Score=352.66  Aligned_cols=293  Identities=19%  Similarity=0.185  Sum_probs=237.1

Q ss_pred             CCCC--CcceeeeeeeeccCCCCeEEE-EeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEE
Q 019139            1 MSTE--GQVITCKAAVAWEPNKPLVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVES   77 (345)
Q Consensus         1 m~~~--~~~~~~~a~~~~~~~~~~~~~-~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~   77 (345)
                      |++.  +.|.+|||+++.++++ ++++ ++|.|+|++|||||||.+++||++|++++.+.   ..+|.++|||++|+|++
T Consensus         1 ~~~~tm~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~   76 (371)
T 3gqv_A            1 MGDQPFIPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVA   76 (371)
T ss_dssp             ---CCCCCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEE
T ss_pred             CCCCCCCCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEE
Confidence            5543  4567899999999976 9998 99999999999999999999999999988763   24689999999999999


Q ss_pred             eCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        78 ~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      +|++|+.|++||||+..       |.+|..+.        .        .+                  |+|+||+++|.
T Consensus        77 vG~~v~~~~~GdrV~~~-------~~~~~~~~--------~--------~~------------------G~~aey~~v~~  115 (371)
T 3gqv_A           77 VGSDVTHIQVGDRVYGA-------QNEMCPRT--------P--------DQ------------------GAFSQYTVTRG  115 (371)
T ss_dssp             ECTTCCSCCTTCEEEEE-------CCTTCTTC--------T--------TC------------------CSSBSEEECCT
T ss_pred             eCCCCCCCCCCCEEEEe-------ccCCCCCC--------C--------CC------------------CcCcCeEEEch
Confidence            99999999999999743       33443221        0        23                  39999999999


Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhh-cCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKV-----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG  224 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~-~~~-----------~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~  224 (345)
                      +.++++|+++++++||++++++.|||+++.+. .++           ++|++|+|+|+ |++|++++|+|+.+|+ +|++
T Consensus       116 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~  194 (371)
T 3gqv_A          116 RVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIA  194 (371)
T ss_dssp             TCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             hheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEE
Confidence            99999999999999999999999999999777 553           89999999998 9999999999999999 8888


Q ss_pred             EcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-ccCCeEEEEeccCCC---
Q 019139          225 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAAS---  300 (345)
Q Consensus       225 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~---  300 (345)
                      +. +++++++++++|+++++|+++  .++.+.+++++++++|++||++|++.++..++++| +++ |+++.+|....   
T Consensus       195 ~~-~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~  270 (371)
T 3gqv_A          195 TC-SPHNFDLAKSRGAEEVFDYRA--PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAA  270 (371)
T ss_dssp             EE-CGGGHHHHHHTTCSEEEETTS--TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---
T ss_pred             Ee-CHHHHHHHHHcCCcEEEECCC--chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccc
Confidence            85 788999999999999999987  67889999999889999999999988899999999 587 99999996542   


Q ss_pred             -CCceecC---hhhhcc-ccEEEEeeecCCccc------ccHHHHHHHHhcccc
Q 019139          301 -GQEISTR---PFQLVT-GRVWKGTAFGGFKSR------SQVPWLVDKYMKKVN  343 (345)
Q Consensus       301 -~~~~~~~---~~~~~~-~~~i~g~~~~~~~~~------~~~~~~~~~~~~g~~  343 (345)
                       ...++++   ...++. ++++.|++.......      +.++++++++++|++
T Consensus       271 ~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  324 (371)
T 3gqv_A          271 TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRL  324 (371)
T ss_dssp             CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             cccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCee
Confidence             1223322   234554 889888754433211      123477788888865

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.1e-46  Score=353.15  Aligned_cols=283  Identities=16%  Similarity=0.168  Sum_probs=242.1

Q ss_pred             CcceeeeeeeeccC---C--CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeC
Q 019139            5 GQVITCKAAVAWEP---N--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG   79 (345)
Q Consensus         5 ~~~~~~~a~~~~~~---~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G   79 (345)
                      ..+++|||+++.++   +  ..++++++|.|+|++|||||||.++|||++|++.+.|.++...+|.++|||++|+|+++|
T Consensus        18 ~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG   97 (363)
T 4dvj_A           18 LYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVG   97 (363)
T ss_dssp             -CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEEC
T ss_pred             hhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeC
Confidence            45688999999876   2  239999999999999999999999999999999999887766889999999999999999


Q ss_pred             CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      ++|++|++||||+..+.                           .. .+                  |+|+||+++|++.
T Consensus        98 ~~v~~~~vGdrV~~~~~---------------------------~~-~~------------------G~~aey~~v~~~~  131 (363)
T 4dvj_A           98 PDVTLFRPGDEVFYAGS---------------------------II-RP------------------GTNAEFHLVDERI  131 (363)
T ss_dssp             TTCCSCCTTCEEEECCC---------------------------TT-SC------------------CSCBSEEEEEGGG
T ss_pred             CCCCCCCCCCEEEEccC---------------------------CC-CC------------------ccceEEEEeCHHH
Confidence            99999999999985321                           00 22                  4999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCC-----CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHH
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE-----PGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKF  232 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~-----~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~  232 (345)
                      ++++|+++++++||+++++++|||+++.+..+++     +|++|||+|+ |++|++++|+|+.+ |+ +|++++++++++
T Consensus       132 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~  210 (363)
T 4dvj_A          132 VGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQ  210 (363)
T ss_dssp             CEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHH
T ss_pred             eeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHH
Confidence            9999999999999999999999999998888888     8999999995 99999999999985 77 999999999999


Q ss_pred             HHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc
Q 019139          233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV  312 (345)
Q Consensus       233 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~  312 (345)
                      ++++++|++.++++.+   ++.+.+.++.++++|++||++|++.+++.++++++++ |+++.+|..     ..+++..+.
T Consensus       211 ~~~~~lGad~vi~~~~---~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-----~~~~~~~~~  281 (363)
T 4dvj_A          211 EWVKSLGAHHVIDHSK---PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP-----SAFDIMLFK  281 (363)
T ss_dssp             HHHHHTTCSEEECTTS---CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC-----SSCCGGGGT
T ss_pred             HHHHHcCCCEEEeCCC---CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC-----CccchHHHh
Confidence            9999999999999864   5778888875559999999999887799999999997 999999752     245666676


Q ss_pred             c-ccEEEEeeecCCc-----c----cccHHHHHHHHhcccc
Q 019139          313 T-GRVWKGTAFGGFK-----S----RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       313 ~-~~~i~g~~~~~~~-----~----~~~~~~~~~~~~~g~~  343 (345)
                      . ++++.|+.+.+..     +    .+.+.++++++++|++
T Consensus       282 ~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  322 (363)
T 4dvj_A          282 RKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRL  322 (363)
T ss_dssp             TTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSS
T ss_pred             hccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCe
Confidence            6 9999997654321     1    2457888899988864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=8.6e-46  Score=347.98  Aligned_cols=279  Identities=19%  Similarity=0.194  Sum_probs=240.1

Q ss_pred             eeeeeeeeccCC-----CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            8 ITCKAAVAWEPN-----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         8 ~~~~a~~~~~~~-----~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      |+|||+++.++|     +.++++++|.|+|++|||||||.+++||++|++.+.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            579999999876     34999999999999999999999999999999999886  34689999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      ++|++||+|+....                            ...+                  |+|+||+++|++.+++
T Consensus        79 ~~~~~GdrV~~~~~----------------------------~~~~------------------G~~aey~~v~~~~~~~  112 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS----------------------------PDQN------------------GSNAEYQLINERLVAK  112 (346)
T ss_dssp             CSCCTTCEEEECCC----------------------------TTSC------------------CSSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCC----------------------------CCCC------------------cceeEEEEEChHHeEE
Confidence            99999999985321                            0022                  4999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCC------CCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE------PGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~------~g~~VlI~G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      +|+++++++||++++++.|||+++.+..+++      +|++|||+| +|++|++++|+|+.+|+ +|+++++++++++++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWT  191 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            9999999999999999999999998889988      999999995 59999999999999999 999999999999999


Q ss_pred             HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-c
Q 019139          236 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-G  314 (345)
Q Consensus       236 ~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~  314 (345)
                      +++|++.++++++   ++.+.+.+..++++|++|||+|++..++.++++++++ |+++.+|..    ..++++..+.. +
T Consensus       192 ~~lGa~~vi~~~~---~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~----~~~~~~~~~~~~~  263 (346)
T 3fbg_A          192 KKMGADIVLNHKE---SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAF----ENDQDLNALKPKS  263 (346)
T ss_dssp             HHHTCSEEECTTS---CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCC----SSCBCGGGGTTTT
T ss_pred             HhcCCcEEEECCc---cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCC----CCCCccccccccc
Confidence            9999999999864   5777788774449999999999888789999999997 999998853    23456666666 9


Q ss_pred             cEEEEeeecCCc---------ccccHHHHHHHHhcccc
Q 019139          315 RVWKGTAFGGFK---------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       315 ~~i~g~~~~~~~---------~~~~~~~~~~~~~~g~~  343 (345)
                      +++.|+.+....         ..+.+.++++++++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  301 (346)
T 3fbg_A          264 LSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIY  301 (346)
T ss_dssp             CEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSS
T ss_pred             eEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCE
Confidence            999997654321         12457888999988864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.8e-47  Score=359.83  Aligned_cols=289  Identities=15%  Similarity=0.126  Sum_probs=239.3

Q ss_pred             CCCCCcceeeeeeeec--c---CCCCeEEEEe---------ecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCc
Q 019139            1 MSTEGQVITCKAAVAW--E---PNKPLVIEDV---------QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPC   65 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~--~---~~~~~~~~~~---------~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~   65 (345)
                      |++++.|.+|||+++.  +   ..+.++++++         |.|+|++|||||||.++|||++|++.+.|.++.. .+|.
T Consensus         2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~   81 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR   81 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred             CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence            8888888999999999  2   2234777777         9999999999999999999999999999987543 6899


Q ss_pred             ccCcceeEEEEEeCCCC-CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCcccccc
Q 019139           66 ILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM  144 (345)
Q Consensus        66 ~~G~e~~G~Vv~~G~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~  144 (345)
                      ++|||++|+|+++|++| ++|++||||+....                           .. .+                
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g---------------------------~~-~~----------------  117 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG---------------------------LS-NW----------------  117 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEECT---------------------------TS-SC----------------
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEecc---------------------------CC-CC----------------
Confidence            99999999999999999 99999999985421                           00 22                


Q ss_pred             CcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCC-CEEEEEcC-ChHHHHHHHHHHHcCCCeE
Q 019139          145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFGL-GTVGLAVAEGAKAAGASRV  222 (345)
Q Consensus       145 ~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g-~~VlI~Ga-g~vG~~a~q~a~~~G~~~v  222 (345)
                        |+|+||+++|++.++++|+++++++||++++.+.|||++ .+..+ +++ ++|+|+|+ |++|++++|+|+.+|+ +|
T Consensus       118 --G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~V  192 (349)
T 3pi7_A          118 --GSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RP  192 (349)
T ss_dssp             --CSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EE
T ss_pred             --ccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EE
Confidence              499999999999999999999999999999999999964 46566 666 68888855 9999999999999999 99


Q ss_pred             EEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC
Q 019139          223 IGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG  301 (345)
Q Consensus       223 i~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~  301 (345)
                      ++++++++++++++++|++.++++++  .++.+.+.+.+++ ++|++||++|++. +..++++++++ |+++.+|... .
T Consensus       193 i~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~  267 (349)
T 3pi7_A          193 IVTVRRDEQIALLKDIGAAHVLNEKA--PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLD-P  267 (349)
T ss_dssp             EEEESCGGGHHHHHHHTCSEEEETTS--TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSC-C
T ss_pred             EEEeCCHHHHHHHHHcCCCEEEECCc--HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccC-C
Confidence            99999999999999999999999877  6788899998887 9999999999876 68999999997 9999999754 3


Q ss_pred             CceecCh-hhhcc-ccEEEEeeecCCcc------cccHHHHHHHHhcccc
Q 019139          302 QEISTRP-FQLVT-GRVWKGTAFGGFKS------RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       302 ~~~~~~~-~~~~~-~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~~  343 (345)
                      ....++. ..++. ++++.|+..+.+..      .++++++++++++|+.
T Consensus       268 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  317 (349)
T 3pi7_A          268 DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW  317 (349)
T ss_dssp             SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSC
T ss_pred             CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCc
Confidence            4566777 66666 99999998654311      2456677777777653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.3e-46  Score=349.25  Aligned_cols=279  Identities=18%  Similarity=0.220  Sum_probs=241.4

Q ss_pred             eeeeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139            8 ITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         8 ~~~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      ++|||+++.+++++   ++++++|.|+|++|||||||.++|||++|++.+.|.++. .++|.++|||++|+|+++|++++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            57999999999987   899999999999999999999999999999999998765 47899999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      +|++||||+...                               .+                  |+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~v  113 (340)
T 3gms_A           83 RELIGKRVLPLR-------------------------------GE------------------GTWQEYVKTSADFVVPI  113 (340)
T ss_dssp             GGGTTCEEEECS-------------------------------SS------------------CSSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEecC-------------------------------CC------------------ccceeEEEcCHHHeEEC
Confidence            999999997421                               22                  39999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      |+++++++||++++.+.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       114 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~  192 (340)
T 3gms_A          114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAY  192 (340)
T ss_dssp             CTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred             CCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcE
Confidence            9999999999999999999999989999999999999998 6999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-c-ccEEEE
Q 019139          243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-T-GRVWKG  319 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~-~~~i~g  319 (345)
                      ++++.+  .++.+.+.+.+++ ++|++||++|++. ....+++|+++ |+++.+|.... ..  +++..+. . ++++..
T Consensus       193 ~~~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~--~~~~~~~~~~~~~~~~  265 (340)
T 3gms_A          193 VIDTST--APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-IQ--VNWAEIVTKAKVHANI  265 (340)
T ss_dssp             EEETTT--SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-CC--CCHHHHHHTSCCEEEE
T ss_pred             EEeCCc--ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-CC--CCHHHhhhcccceEEE
Confidence            999877  6788899999888 9999999999877 56677999997 99999998542 23  3433333 2 566655


Q ss_pred             eeecCC-------cccccHHHHHHHHhcccc
Q 019139          320 TAFGGF-------KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       320 ~~~~~~-------~~~~~~~~~~~~~~~g~~  343 (345)
                      +.+..+       ...+++.++++++++|++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  296 (340)
T 3gms_A          266 FHLRHWNDEVSPYKWQETFRHLIRLVENEQL  296 (340)
T ss_dssp             CCHHHHHHHSCHHHHHHHHHHHHHHHHTTSS
T ss_pred             EEehhhhhhcCHHHHHHHHHHHHHHHHcCCC
Confidence            543211       123677888899888865

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1e-45  Score=344.54  Aligned_cols=280  Identities=24%  Similarity=0.300  Sum_probs=243.7

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |||+++.+++++  ++++++|.|+|++|||+|||.++|||++|++++.|.++..++|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998876  899999999999999999999999999999999998876678999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||||+....                              .+                  |+|+||+++|++.++++|+++
T Consensus        82 GdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~~P~~~  113 (325)
T 3jyn_A           82 GDRVAYGTG------------------------------PL------------------GAYSEVHVLPEANLVKLADSV  113 (325)
T ss_dssp             TCEEEESSS------------------------------SS------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEecC------------------------------CC------------------ccccceEEecHHHeEECCCCC
Confidence            999984321                              22                  399999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++++||++++.+.|||+++.+..++++|++|+|+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++
T Consensus       114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~  192 (325)
T 3jyn_A          114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY  192 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            999999999999999999988899999999999995 9999999999999999 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc--ccEEEEeeec
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGTAFG  323 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~~~~  323 (345)
                      .+  .++.+.+.+.+++ ++|++||++|+ ..+..++++++++ |+++.+|...+ ....++...++.  ++++.+..++
T Consensus       193 ~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T 3jyn_A          193 SH--EDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASG-PVSGVNLGILAQKDSVYVTRPTLG  267 (325)
T ss_dssp             TT--SCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTC-CCCSCCTHHHHHTTSCEEECCCHH
T ss_pred             CC--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCC-CCCCCCHHHHhhcCcEEEEeeeee
Confidence            77  6788899999887 99999999998 4499999999997 99999998643 233566655554  5677665443


Q ss_pred             CCc-ccccH----HHHHHHHhcccc
Q 019139          324 GFK-SRSQV----PWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~-~~~~~----~~~~~~~~~g~~  343 (345)
                      ++. ..+++    .++++++++|+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l  292 (325)
T 3jyn_A          268 SYANNAQNLQTMADELFDMLASGKL  292 (325)
T ss_dssp             HHSCSTTHHHHHHHHHHHHHHTTSS
T ss_pred             eecCCHHHHHHHHHHHHHHHHCCCe
Confidence            321 22333    478888888865

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=7e-46  Score=348.99  Aligned_cols=280  Identities=23%  Similarity=0.292  Sum_probs=232.6

Q ss_pred             eeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |+|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            67999999999863  999999999999999999999999999999999998754 478999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+...                               .+                  |+|+||+++|.+.++++|
T Consensus        82 ~~~GdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~iP  112 (349)
T 4a27_A           82 YEIGDRVMAFV-------------------------------NY------------------NAWAEVVCTPVEFVYKIP  112 (349)
T ss_dssp             CCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEec-------------------------------CC------------------CcceEEEEecHHHeEECC
Confidence            99999998532                               22                  399999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF  243 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  243 (345)
                      +++++++||+++++++|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|..+|+++. ++++.+.++ +|++.+
T Consensus       113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~  190 (349)
T 4a27_A          113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHL  190 (349)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEE
Confidence            999999999999999999999988899999999999998 99999999999999754888886 567778887 999999


Q ss_pred             eCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC--C-------------CceecCh
Q 019139          244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--G-------------QEISTRP  308 (345)
Q Consensus       244 i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~--~-------------~~~~~~~  308 (345)
                      ++ .+  .++.+.+.+++++++|++|||+|++. +..++++++++ |+++.+|....  +             ....+++
T Consensus       191 ~~-~~--~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
T 4a27_A          191 FD-RN--ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP  265 (349)
T ss_dssp             EE-TT--SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CH
T ss_pred             Ec-CC--ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCH
Confidence            98 44  67888888888779999999999876 68999999997 99999997431  1             1134677


Q ss_pred             hhhcc-ccEEEEeeecCCc--------ccccHHHHHHHHhcccc
Q 019139          309 FQLVT-GRVWKGTAFGGFK--------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       309 ~~~~~-~~~i~g~~~~~~~--------~~~~~~~~~~~~~~g~~  343 (345)
                      ..++. ++++.|+.+..+.        ..++++++++++++|+.
T Consensus       266 ~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  309 (349)
T 4a27_A          266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI  309 (349)
T ss_dssp             HHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc
Confidence            77777 9999998764321        14678889999988864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.9e-45  Score=344.55  Aligned_cols=283  Identities=21%  Similarity=0.278  Sum_probs=240.4

Q ss_pred             CCcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCC
Q 019139            4 EGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGE   80 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~   80 (345)
                      .+.|.+|||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++++.|.++.. .+|.++|||++|+|+++|+
T Consensus        17 ~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~   96 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGP   96 (354)
T ss_dssp             ----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECS
T ss_pred             ccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECC
Confidence            356788999999998863  8999999999999999999999999999999999876543 5789999999999999999


Q ss_pred             CC-CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           81 GV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        81 ~v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      +| ++|++||||+...                               .+                  |+|+||+++|++.
T Consensus        97 ~v~~~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~  127 (354)
T 2j8z_A           97 GCQGHWKIGDTAMALL-------------------------------PG------------------GGQAQYVTVPEGL  127 (354)
T ss_dssp             CC--CCCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGG
T ss_pred             CcCCCCCCCCEEEEec-------------------------------CC------------------CcceeEEEeCHHH
Confidence            99 9999999998431                               12                  3999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      ++++|+++++++||+++++++|||+++.+..++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++++
T Consensus       128 ~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~  206 (354)
T 2j8z_A          128 LMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL  206 (354)
T ss_dssp             EEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred             cEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc
Confidence            99999999999999999999999999988899999999999996 9999999999999999 899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecCh-hhhcc-cc
Q 019139          239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVT-GR  315 (345)
Q Consensus       239 g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~  315 (345)
                      |++.++++.+  .++.+.+.+.+++ ++|++||++|++ .+..++++++++ |+++.+|... +...++++ ..++. ++
T Consensus       207 g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~  281 (354)
T 2j8z_A          207 GAAAGFNYKK--EDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGLMG-GGDINGPLFSKLLFKRG  281 (354)
T ss_dssp             TCSEEEETTT--SCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCCTT-CSCCCSCHHHHHHHTTC
T ss_pred             CCcEEEecCC--hHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEeccC-CCccCCChhHHHHhCCC
Confidence            9999998876  5677888888776 899999999986 488999999997 9999999854 33456777 66666 99


Q ss_pred             EEEEeeecCCccc------ccH-HHHHHHHhcc
Q 019139          316 VWKGTAFGGFKSR------SQV-PWLVDKYMKK  341 (345)
Q Consensus       316 ~i~g~~~~~~~~~------~~~-~~~~~~~~~g  341 (345)
                      ++.|+.++.....      +++ +++++++++|
T Consensus       282 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  314 (354)
T 2j8z_A          282 SLITSLLRSRDNKYKQMLVNAFTEQILPHFSTE  314 (354)
T ss_dssp             EEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC-
T ss_pred             EEEEEEcccccccccHHHHHHHHHHHHHHHHcC
Confidence            9999976554211      112 3467777777

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.2e-45  Score=349.22  Aligned_cols=285  Identities=18%  Similarity=0.201  Sum_probs=240.8

Q ss_pred             ceeeeeeeeccCCCC---eEEEEeecCCCC--CCeEEEEEeeeecCccccccccCCCCC-CCCC---------cccCcce
Q 019139            7 VITCKAAVAWEPNKP---LVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPE-GLFP---------CILGHEA   71 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~---~~~~~~~~p~~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p---------~~~G~e~   71 (345)
                      |++|||+++.+++++   ++++++|.|+|.  +|||||||.++|||++|++.+.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            468999999999875   899999999887  999999999999999999999987654 2466         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeee
Q 019139           72 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ  151 (345)
Q Consensus        72 ~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~  151 (345)
                      +|+|+++|++|+.|++||||+..+.                              .+                  |+|+|
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------~~------------------G~~ae  112 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRT  112 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC------------------------------CC------------------Ccchh
Confidence            9999999999999999999985421                              12                  39999


Q ss_pred             eEEeecceEEEcCC-----------CCChhhhcccccchhhhhHHHHhhcCCCCC-CEEEEEcC-ChHHHHHHHHHHHcC
Q 019139          152 YTVVHDVSVAKIDP-----------QAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFGL-GTVGLAVAEGAKAAG  218 (345)
Q Consensus       152 ~~~v~~~~~~~iP~-----------~l~~~~aa~~~~~~~ta~~al~~~~~~~~g-~~VlI~Ga-g~vG~~a~q~a~~~G  218 (345)
                      |+++|++.++++|+           ++++++||+++++++|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|
T Consensus       113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G  192 (364)
T 1gu7_A          113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN  192 (364)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT
T ss_pred             eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC
Confidence            99999999999998           899999999999999999998777789999 99999998 999999999999999


Q ss_pred             CCeEEEEcCChhH----HHHHHhcCCceEeCCCCC-CccHHHHHHhhc--CC-CccEEEEccCCHHHHHHHHHHhccCCe
Q 019139          219 ASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDH-DKPIQQVLVDLT--DG-GVDYSFECIGNVSVMRAALECCHKGWG  290 (345)
Q Consensus       219 ~~~vi~~~~~~~~----~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~--~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G  290 (345)
                      + +++++.++.++    +++++++|+++++++++. ..++.+.+.+++  ++ ++|++||++|++... .++++++++ |
T Consensus       193 a-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G  269 (364)
T 1gu7_A          193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-G  269 (364)
T ss_dssp             C-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-C
T ss_pred             C-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-C
Confidence            9 78777655543    677899999999987531 135677888887  44 899999999987744 889999997 9


Q ss_pred             EEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc------ccccHHHHHHHHhcccc
Q 019139          291 TSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       291 ~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~~  343 (345)
                      +++.+|... +...++++..++. ++++.|+..+.+.      ..++++++++++++|++
T Consensus       270 ~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  328 (364)
T 1gu7_A          270 LMLTYGGMS-FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL  328 (364)
T ss_dssp             EEEECCCCS-SCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEecCCC-CCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCc
Confidence            999999854 3456778777776 9999998764321      12568899999998875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-44  Score=339.31  Aligned_cols=279  Identities=23%  Similarity=0.329  Sum_probs=238.9

Q ss_pred             ceeeeeeeeccCCCC--eEE-EEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCC
Q 019139            7 VITCKAAVAWEPNKP--LVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~--~~~-~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      |.+|||+++.+++.+  +++ +++|.|+|++|||+|||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+++
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            456999999988754  888 899999999999999999999999999999987643 4689999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      +.|++||||+..+.                              .+                  |+|+||+++|++.+++
T Consensus       107 ~~~~vGdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~  138 (351)
T 1yb5_A          107 SAFKKGDRVFTSST------------------------------IS------------------GGYAEYALAADHTVYK  138 (351)
T ss_dssp             TTCCTTCEEEESCC------------------------------SS------------------CSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEeCC------------------------------CC------------------CcceeEEEECHHHeEE
Confidence            99999999985321                              12                  3999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +|+++++++||+++++++|||+++.+..+++++++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++
T Consensus       139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~  217 (351)
T 1yb5_A          139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH  217 (351)
T ss_dssp             CCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCC
Confidence            99999999999999999999999987889999999999998 9999999999999999 899999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      .++++.+  .++.+.+.+.+++ ++|++||++|.+ .+..++++++++ |+++.+|.. .  ..++++..++. ++++.|
T Consensus       218 ~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~~~~~~i~g  290 (351)
T 1yb5_A          218 EVFNHRE--VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESSIIG  290 (351)
T ss_dssp             EEEETTS--TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCEEEE
T ss_pred             EEEeCCC--chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCC-CEEEEEecC-C--CCccCHHHHHhCCcEEEE
Confidence            9998876  5677788888777 899999999985 488999999997 999999963 2  35677777766 999999


Q ss_pred             eeecCCcccccHH----HHHHHHhccc
Q 019139          320 TAFGGFKSRSQVP----WLVDKYMKKV  342 (345)
Q Consensus       320 ~~~~~~~~~~~~~----~~~~~~~~g~  342 (345)
                      +.+... ..+++.    ++.+++++|+
T Consensus       291 ~~~~~~-~~~~~~~~~~~l~~~~~~g~  316 (351)
T 1yb5_A          291 VTLFSS-TKEEFQQYAAALQAGMEIGW  316 (351)
T ss_dssp             CCGGGC-CHHHHHHHHHHHHHHHHHTC
T ss_pred             EEeecC-CHHHHHHHHHHHHHHHHCCC
Confidence            865432 123343    3445565554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.1e-46  Score=346.61  Aligned_cols=270  Identities=13%  Similarity=0.135  Sum_probs=216.0

Q ss_pred             eeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139            8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus         8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      .+|||+++.+..+.++++++|.|+|++|||||||.++|||++|++.+.|.++..++|.++|||++|+|+++|+++++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            47999999953344999999999999999999999999999999999998876788999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||||+..+..                           . .+                  |+|+||+++|++.++++|+++
T Consensus        83 GdrV~~~~~~---------------------------~-~~------------------G~~aey~~v~~~~~~~iP~~~  116 (315)
T 3goh_A           83 GRRVAYHTSL---------------------------K-RH------------------GSFAEFTVLNTDRVMTLPDNL  116 (315)
T ss_dssp             TCEEEEECCT---------------------------T-SC------------------CSSBSEEEEETTSEEECCTTS
T ss_pred             CCEEEEeCCC---------------------------C-CC------------------cccccEEEEcHHHhccCcCCC
Confidence            9999864310                           0 22                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||+++++++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++ +++++++++++|++.+++  
T Consensus       117 ~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--  191 (315)
T 3goh_A          117 SFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--  191 (315)
T ss_dssp             CHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--
T ss_pred             CHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--
Confidence            9999999999999999999 88999999999999999999999999999999 999999 899999999999999884  


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc-
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-  326 (345)
                      +     .+   ++ ++++|++||++|++. ...++++++++ |+++.+|.......  ++.  +..++++.+..+.+.. 
T Consensus       192 d-----~~---~v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~--~~~~~~~~~~~~~~~~~  256 (315)
T 3goh_A          192 E-----PS---QV-TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAPI--DPA--FTRTISYHEIALGALHD  256 (315)
T ss_dssp             S-----GG---GC-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHH
T ss_pred             C-----HH---Hh-CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCccc--cch--hhhcceeeEEEeecccc
Confidence            1     11   12 449999999999976 58899999997 99999986432222  221  1124444444332211 


Q ss_pred             ---------ccccHHHHHHHHhcccc
Q 019139          327 ---------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 ---------~~~~~~~~~~~~~~g~~  343 (345)
                               ..+.++++++++++|+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~~g~l  282 (315)
T 3goh_A          257 FGDRQDWQILMQQGEALLTLIAQGKM  282 (315)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             cCChhHHHHHHHHHHHHHHHHHCCCc
Confidence                     11346888999998864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.4e-45  Score=346.39  Aligned_cols=283  Identities=23%  Similarity=0.308  Sum_probs=235.2

Q ss_pred             cceeeeeeeeccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCC
Q 019139            6 QVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      +|.+|||+++.+++.+   ++++++|.|+|++|||||||.++|||++|++.+.|.++.. .+|.++|||++|+|+++|++
T Consensus        23 m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  102 (357)
T 1zsy_A           23 MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSN  102 (357)
T ss_dssp             CCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTT
T ss_pred             CchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCC
Confidence            4567999999999885   8899999999999999999999999999999999876543 57999999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA  161 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  161 (345)
                      ++.|++||||+..+.                              .+                  |+|+||+++|++.++
T Consensus       103 v~~~~vGdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~  134 (357)
T 1zsy_A          103 VTGLKPGDWVIPANA------------------------------GL------------------GTWRTEAVFSEEALI  134 (357)
T ss_dssp             CCSCCTTCEEEESSS------------------------------CS------------------CCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEEcCC------------------------------CC------------------ccceeEEecCHHHcE
Confidence            999999999985421                              12                  499999999999999


Q ss_pred             EcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHH
Q 019139          162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAK  236 (345)
Q Consensus       162 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~~  236 (345)
                      ++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +++++.+++    +++++++
T Consensus       135 ~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~  213 (357)
T 1zsy_A          135 QVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK  213 (357)
T ss_dssp             EECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHH
T ss_pred             ECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHH
Confidence            999999999999999999999999988889999999999998 9999999999999999 666554432    3568889


Q ss_pred             hcCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-
Q 019139          237 NFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-  313 (345)
Q Consensus       237 ~~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  313 (345)
                      ++|++.++++.+   ...+.+.+.+.+  ++|++||++|++. ...++++++++ |+++.+|... +....+++..++. 
T Consensus       214 ~lGa~~vi~~~~---~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~  287 (357)
T 1zsy_A          214 SLGAEHVITEEE---LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMA-KQPVVASVSLLIFK  287 (357)
T ss_dssp             HTTCSEEEEHHH---HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCT-TCCBCCCHHHHHHS
T ss_pred             hcCCcEEEecCc---chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCC-CCCCCCCHHHHHhc
Confidence            999999987643   111234455544  5999999999866 56789999997 9999998643 3456777777766 


Q ss_pred             ccEEEEeeecCCc-------ccccHHHHHHHHhcccc
Q 019139          314 GRVWKGTAFGGFK-------SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       314 ~~~i~g~~~~~~~-------~~~~~~~~~~~~~~g~~  343 (345)
                      ++++.|+..+.+.       ..+.++++++++++|++
T Consensus       288 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  324 (357)
T 1zsy_A          288 DLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQL  324 (357)
T ss_dssp             CCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSS
T ss_pred             CceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCC
Confidence            9999998765321       12457888999998874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=6.8e-45  Score=338.46  Aligned_cols=274  Identities=19%  Similarity=0.190  Sum_probs=229.7

Q ss_pred             ceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-----CCCCCCcccCcceeEEEEEeC
Q 019139            7 VITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFPCILGHEAAGIVESVG   79 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-----~~~~~p~~~G~e~~G~Vv~~G   79 (345)
                      +++|||+++.+++++  ++++++|.|+|++|||||||.++|||++|++.+.|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            468999999998876  9999999999999999999999999999999998832     234689999999999999999


Q ss_pred             CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                      +++++|++||||+..+..++                           .+                  |+|+||+++|++.
T Consensus        84 ~~v~~~~~GdrV~~~~~~~~---------------------------~~------------------G~~aey~~v~~~~  118 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFPD---------------------------HP------------------CCYAEYVCASPDT  118 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTTT---------------------------CC------------------CCSBSEEEECGGG
T ss_pred             CCCCCCCCCCEEEEccCCCC---------------------------CC------------------CcceEEEEecHHH
Confidence            99999999999986532110                           22                  4999999999999


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      ++++|+++++++||++++++.|||+++ +..++++|++|+|+| +|++|++++|+|+.+|+ +|+++. +++++++++++
T Consensus       119 ~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~l  195 (321)
T 3tqh_A          119 IIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKAL  195 (321)
T ss_dssp             EEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHH
T ss_pred             hccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHc
Confidence            999999999999999999999999998 889999999999997 59999999999999999 888886 45668999999


Q ss_pred             CCceEeCCCCCCcc-HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccE
Q 019139          239 GVTEFVNPKDHDKP-IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRV  316 (345)
Q Consensus       239 g~~~~i~~~~~~~~-~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  316 (345)
                      |+++++++++  .+ +.+.+     .++|++||++|++. ...++++++++ |+++.+|....  ..  ....+.. +++
T Consensus       196 Ga~~~i~~~~--~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~--~~--~~~~~~~~~~~  262 (321)
T 3tqh_A          196 GAEQCINYHE--EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITA--GR--VIEVAKQKHRR  262 (321)
T ss_dssp             TCSEEEETTT--SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTH--HH--HHHHHHHTTCE
T ss_pred             CCCEEEeCCC--cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCc--hh--hhhhhhhcceE
Confidence            9999999876  34 33322     48999999999877 59999999997 99999986432  11  1222334 899


Q ss_pred             EEEeeecCCcccccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +.++...  ...++++++++++++|+.
T Consensus       263 ~~~~~~~--~~~~~~~~~~~l~~~g~l  287 (321)
T 3tqh_A          263 AFGLLKQ--FNIEELHYLGKLVSEDKL  287 (321)
T ss_dssp             EECCCCC--CCHHHHHHHHHHHHTTSS
T ss_pred             EEEEecC--CCHHHHHHHHHHHHCCCc
Confidence            9886432  235788999999988864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2.8e-45  Score=341.34  Aligned_cols=279  Identities=18%  Similarity=0.214  Sum_probs=234.2

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++.+++++  ++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999986  889999999999999999999999999999999998764 4789999999999999998  57899


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||+..+   |                     ..|.. .+                  |+|+||+++|++.++++|++
T Consensus        79 vGdrV~~~~---~---------------------~~g~~-~~------------------G~~aey~~v~~~~~~~iP~~  115 (324)
T 3nx4_A           79 AGQEVLLTG---W---------------------GVGEN-HW------------------GGLAERARVKGDWLVALPAG  115 (324)
T ss_dssp             TTCEEEEEC---T---------------------TBTTT-BC------------------CSSBSEEEECGGGCEECCTT
T ss_pred             CCCEEEEcc---c---------------------ccCCC-CC------------------CceeeEEecCHHHcEECCCC
Confidence            999998653   1                     01111 22                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHH--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +++++||++++++.|||+++.  ...++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  194 (324)
T 3nx4_A          116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR  194 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999999999999875  345566633 4999998 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++++++.  +.   +.+++++++|++||++|++ .++.++++++++ |+++.+|... +...++++..++. ++++.|+.
T Consensus       195 vi~~~~~--~~---~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~~~g~~  266 (324)
T 3nx4_A          195 ILSRDEF--AE---SRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAG-GFALPTTVMPFILRNVRLQGVD  266 (324)
T ss_dssp             EEEGGGS--SC---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTT-CSEEEEESHHHHHHCCEEEECC
T ss_pred             EEecCCH--HH---HHhhcCCCccEEEECCCcH-HHHHHHHHHhcC-CEEEEEecCC-CCCCCCCHHHHhhcCeEEEEEe
Confidence            9988762  22   4455666999999999986 699999999997 9999999854 4456777777776 99999987


Q ss_pred             ecCCcc---cccHHHHHHHHhccc
Q 019139          322 FGGFKS---RSQVPWLVDKYMKKV  342 (345)
Q Consensus       322 ~~~~~~---~~~~~~~~~~~~~g~  342 (345)
                      ......   .+.++++++++++|+
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~~g~  290 (324)
T 3nx4_A          267 SVMTPPARRAEAWARLVKDLPESF  290 (324)
T ss_dssp             STTCCHHHHHHHHHHHHHHSCHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHcCC
Confidence            544321   245677777777765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2e-44  Score=336.89  Aligned_cols=280  Identities=28%  Similarity=0.400  Sum_probs=237.7

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CC--CCCCcccCcceeEEEEEeCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PE--GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~--~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      |||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++++.|.+ +.  ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999988754  8999999999999999999999999999999999876 22  457999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+.                              .+                  |+|+||+++|++.++++|
T Consensus        82 ~~~GdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP------------------------------PL------------------GAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS------------------------------SC------------------CCSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC------------------------------CC------------------CcceeEEEecHHHcEeCC
Confidence            999999974321                              12                  399999999999999999


Q ss_pred             CCCChhh--hcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          165 PQAPLDK--VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       165 ~~l~~~~--aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +++++++  ||+++++++|||+++.+..+++++++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~  192 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH  192 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence            9999999  99999999999999977889999999999997 9999999999999999 999999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChh-hhcc-c--cE
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVT-G--RV  316 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~--~~  316 (345)
                      .++++.+  .++.+.+.+.+.+ ++|++||++|+ ..++.++++++++ |+++.+|... +...++++. .++. +  ++
T Consensus       193 ~~~d~~~--~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~  267 (333)
T 1wly_A          193 HTINYST--QDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHAS-GVADPIRVVEDLGVRGSLFI  267 (333)
T ss_dssp             EEEETTT--SCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTT-CCCCCCCHHHHTTTTTSCEE
T ss_pred             EEEECCC--HHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCC-CCcCCCChhHhhhhcCCcEE
Confidence            9998876  5677788887766 89999999998 5599999999997 9999999854 234456666 5655 8  99


Q ss_pred             EEEeeecCCcc----cccHHHHHHHHhcccc
Q 019139          317 WKGTAFGGFKS----RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       317 i~g~~~~~~~~----~~~~~~~~~~~~~g~~  343 (345)
                      +.|+....+..    .++++++++++++|+.
T Consensus       268 i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l  298 (333)
T 1wly_A          268 TRPALWHYMSNRSEIDEGSKCLFDAVKAGVL  298 (333)
T ss_dssp             ECCCGGGGSCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             EEEeehhhccCHHHHHHHHHHHHHHHHCCCc
Confidence            99986422111    2468889999998864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.1e-44  Score=332.81  Aligned_cols=280  Identities=21%  Similarity=0.264  Sum_probs=238.7

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP   87 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~   87 (345)
                      |||+++.+++.+  ++++++|.|+|++|||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999988754  889999999999999999999999999999999987765568999999999999999999999999


Q ss_pred             CCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        88 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      ||||.....                              .+                  |+|+||+++|++.++++|+++
T Consensus        82 GdrV~~~g~------------------------------~~------------------G~~aey~~v~~~~~~~iP~~l  113 (327)
T 1qor_A           82 GDRVVYAQS------------------------------AL------------------GAYSSVHNIIADKAAILPAAI  113 (327)
T ss_dssp             TCEEEESCC------------------------------SS------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEECCC------------------------------CC------------------ceeeeEEEecHHHcEECCCCC
Confidence            999942100                              12                  399999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      ++++||+++++++|||+++.+..+++++++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++++
T Consensus       114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~  192 (327)
T 1qor_A          114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINY  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEEC
Confidence            999999999999999999977889999999999996 9999999999999999 99999999999999999999999988


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc-c-ccEEEEeeec
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-T-GRVWKGTAFG  323 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~-~~~i~g~~~~  323 (345)
                      .+  .++.+.+.+.+.+ ++|++||++| ...++.++++++++ |+++.+|.... ....+++..++ + ++++.++..+
T Consensus       193 ~~--~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 1qor_A          193 RE--EDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQKGSLYVTRPSLQ  267 (327)
T ss_dssp             TT--SCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHHTTSCEEECCCHH
T ss_pred             CC--ccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCC-CCCccCHHHHhhccceEEEccchh
Confidence            76  5677788887766 8999999999 45699999999997 99999998543 23456655544 4 6788765432


Q ss_pred             CCc-----ccccHHHHHHHHhcccc
Q 019139          324 GFK-----SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       324 ~~~-----~~~~~~~~~~~~~~g~~  343 (345)
                      ++.     ..+.++++++++++|++
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l  292 (327)
T 1qor_A          268 GYITTREELTEASNELFSLIASGVI  292 (327)
T ss_dssp             HHCCSHHHHHHHHHHHHHHHHTTSS
T ss_pred             hhcCCHHHHHHHHHHHHHHHHCCCc
Confidence            221     13457889999998864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.8e-43  Score=332.78  Aligned_cols=280  Identities=19%  Similarity=0.231  Sum_probs=238.7

Q ss_pred             cceeeeeeeeccCCC----CeEE-EEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeC
Q 019139            6 QVITCKAAVAWEPNK----PLVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVG   79 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~----~~~~-~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G   79 (345)
                      .+.+|||+++.+++.    .+++ +++|.|+|++|||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            356799999999875    3889 999999999999999999999999999999987653 4689999999999999999


Q ss_pred             CCCC-CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecc
Q 019139           80 EGVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV  158 (345)
Q Consensus        80 ~~v~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  158 (345)
                      ++|+ .|++||||+..                                .+                  |+|+||+++|++
T Consensus       100 ~~V~~~~~vGdrV~~~--------------------------------~~------------------G~~aey~~v~~~  129 (362)
T 2c0c_A          100 LSASARYTVGQAVAYM--------------------------------AP------------------GSFAEYTVVPAS  129 (362)
T ss_dssp             TTGGGTCCTTCEEEEE--------------------------------CS------------------CCSBSEEEEEGG
T ss_pred             CCccCCCCCCCEEEEc--------------------------------cC------------------CcceeEEEEcHH
Confidence            9999 99999999843                                12                  399999999999


Q ss_pred             eEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       159 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      .++++|+. + .++|+++++++|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.+++
T Consensus       130 ~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          130 IATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             GCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            99999996 3 4677788899999999988889999999999996 9999999999999999 89999999999999999


Q ss_pred             cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCC------ce---ecCh
Q 019139          238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ------EI---STRP  308 (345)
Q Consensus       238 ~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~------~~---~~~~  308 (345)
                      +|++.++++.+  .++.+.+.+.+++++|++||++|. ..++.++++++++ |+++.+|......      .+   .++ 
T Consensus       207 ~Ga~~~~~~~~--~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~-  281 (362)
T 2c0c_A          207 LGCDRPINYKT--EPVGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLP-  281 (362)
T ss_dssp             TTCSEEEETTT--SCHHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHH-
T ss_pred             cCCcEEEecCC--hhHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccH-
Confidence            99999998876  567777877775589999999998 4599999999997 9999999753211      00   222 


Q ss_pred             hhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139          309 FQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       309 ~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~  343 (345)
                      ..++. ++++.|+..+.+.  ..++++++++++++|++
T Consensus       282 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  319 (362)
T 2c0c_A          282 AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDL  319 (362)
T ss_dssp             HHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCS
T ss_pred             HHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCe
Confidence            34555 9999998765442  23578999999999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=7.9e-43  Score=326.47  Aligned_cols=276  Identities=16%  Similarity=0.174  Sum_probs=234.7

Q ss_pred             eeeeeeeecc------CCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcc----eeEEEEE
Q 019139            8 ITCKAAVAWE------PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE----AAGIVES   77 (345)
Q Consensus         8 ~~~~a~~~~~------~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e----~~G~Vv~   77 (345)
                      ++|||+++.+      ..+.++++++|.|+|++|||||||.+++||++|...+.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            5799999985      123499999999999999999999999999999888776432 2356677777    8999999


Q ss_pred             eCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec
Q 019139           78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD  157 (345)
Q Consensus        78 ~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  157 (345)
                      .  +++.|++||||+.                                  +                  |+|+||+++|+
T Consensus        85 ~--~v~~~~vGdrV~~----------------------------------~------------------G~~aey~~v~~  110 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNG----------------------------------A------------------LGVQDYFIGEP  110 (336)
T ss_dssp             E--CSTTCCTTCEEEE----------------------------------E------------------CCSBSEEEECC
T ss_pred             c--CCCCCCCCCEEec----------------------------------c------------------CCceEEEEech
Confidence            4  5789999999983                                  1                  38999999999


Q ss_pred             ceEEEcCCCCChhhh--cccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 019139          158 VSVAKIDPQAPLDKV--CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR  234 (345)
Q Consensus       158 ~~~~~iP~~l~~~~a--a~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~  234 (345)
                      +.++++|+++++.++  |+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.
T Consensus       111 ~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~  189 (336)
T 4b7c_A          111 KGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRF  189 (336)
T ss_dssp             TTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHH
T ss_pred             HHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            999999999987776  7788999999999989999999999999998 9999999999999999 99999999999999


Q ss_pred             H-HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCC-----CCceecCh
Q 019139          235 A-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS-----GQEISTRP  308 (345)
Q Consensus       235 ~-~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-----~~~~~~~~  308 (345)
                      + +++|++.++++.+  .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|....     .....+++
T Consensus       190 ~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~  265 (336)
T 4b7c_A          190 LVEELGFDGAIDYKN--EDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANY  265 (336)
T ss_dssp             HHHTTCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTT
T ss_pred             HHHHcCCCEEEECCC--HHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhH
Confidence            9 8999999999877  678888888886699999999997 4599999999997 99999997541     11245666


Q ss_pred             hhhcc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139          309 FQLVT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       309 ~~~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~  343 (345)
                      ..++. ++++.|+..+.+..  .++++++++++++|+.
T Consensus       266 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  303 (336)
T 4b7c_A          266 LSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKL  303 (336)
T ss_dssp             THHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS
T ss_pred             HHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCc
Confidence            67776 99999998765421  2677889999998875

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-43  Score=327.04  Aligned_cols=262  Identities=18%  Similarity=0.243  Sum_probs=216.3

Q ss_pred             eeeeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      .+|||+++.+++.  .++++++|.|+|++|||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|++.  +++.
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~   79 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPR   79 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCC
Confidence            3699999999874  3889999999999999999999999999999999886543 367999999999999995  5688


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+.                        ..|.. .+                  |+|+||+++|++.++++|
T Consensus        80 ~~vGdrV~~~~~------------------------~~g~~-~~------------------G~~aey~~v~~~~~~~~P  116 (328)
T 1xa0_A           80 FREGDEVIATGY------------------------EIGVT-HF------------------GGYSEYARLHGEWLVPLP  116 (328)
T ss_dssp             CCTTCEEEEEST------------------------TBTTT-BC------------------CSSBSEEEECGGGCEECC
T ss_pred             CCCCCEEEEccc------------------------cCCCC-CC------------------ccceeEEEechHHeEECC
Confidence            999999986421                        01111 22                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHH--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +++++++||++++++.|||.++.  ...++++++ +|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus       117 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa  195 (328)
T 1xa0_A          117 KGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA  195 (328)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            99999999999999999998764  446788886 9999998 9999999999999999 79999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      +.++++.+  .+ .+.+.+++++++|++||++|+. .+..++++++++ |+++.+|... +...++++..++. ++++.|
T Consensus       196 ~~~i~~~~--~~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~~~~~~~~i~g  269 (328)
T 1xa0_A          196 KEVLARED--VM-AERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLG  269 (328)
T ss_dssp             SEEEECC------------CCSCCEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEE
T ss_pred             cEEEecCC--cH-HHHHHHhcCCcccEEEECCcHH-HHHHHHHhhccC-CEEEEEeecC-CCCCCCchhhhhhcCceEEE
Confidence            99998865  22 2344555555899999999985 599999999997 9999999854 3345666666666 999999


Q ss_pred             ee
Q 019139          320 TA  321 (345)
Q Consensus       320 ~~  321 (345)
                      +.
T Consensus       270 ~~  271 (328)
T 1xa0_A          270 ID  271 (328)
T ss_dssp             CC
T ss_pred             Ee
Confidence            85

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.6e-43  Score=330.34  Aligned_cols=263  Identities=21%  Similarity=0.260  Sum_probs=218.7

Q ss_pred             ceeeeeeeeccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139            7 VITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         7 ~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      |.+|||+++.+++.  .++++++|.|+|++|||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            34699999998873  4899999999999999999999999999999999887643 367999999999999996  467


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      +|++||||+..+.                        ..|.. .+                  |+|+||+++|++.++++
T Consensus        80 ~~~vGdrV~~~~~------------------------~~g~~-~~------------------G~~aey~~v~~~~~~~i  116 (330)
T 1tt7_A           80 RFAEGDEVIATSY------------------------ELGVS-RD------------------GGLSEYASVPGDWLVPL  116 (330)
T ss_dssp             TCCTTCEEEEEST------------------------TBTTT-BC------------------CSSBSSEEECGGGEEEC
T ss_pred             CCCCCCEEEEccc------------------------ccCCC-CC------------------ccceeEEEecHHHeEEC
Confidence            8999999986421                        01111 22                  49999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHH--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG  239 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g  239 (345)
                      |+++++++||++++++.|||.++.  ...++++++ +|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       117 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  195 (330)
T 1tt7_A          117 PQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLG  195 (330)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHT
T ss_pred             CCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence            999999999999999999998764  446788886 9999998 9999999999999999 7999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEE
Q 019139          240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK  318 (345)
Q Consensus       240 ~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  318 (345)
                      ++.++++++.  + .+.+.+++++++|++||++|++ ++..++++++++ |+++.+|... +..+++++..++. ++++.
T Consensus       196 a~~v~~~~~~--~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~  269 (330)
T 1tt7_A          196 ASEVISREDV--Y-DGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVSLL  269 (330)
T ss_dssp             CSEEEEHHHH--C-SSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCEEE
T ss_pred             CcEEEECCCc--h-HHHHHHhhcCCccEEEECCcHH-HHHHHHHhhcCC-CEEEEEecCC-CCccCcchHHHHhcCeEEE
Confidence            9999876431  1 1112334444899999999995 599999999997 9999999854 3456677766666 99999


Q ss_pred             Eee
Q 019139          319 GTA  321 (345)
Q Consensus       319 g~~  321 (345)
                      |+.
T Consensus       270 g~~  272 (330)
T 1tt7_A          270 GID  272 (330)
T ss_dssp             ECC
T ss_pred             EEe
Confidence            985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.8e-41  Score=319.85  Aligned_cols=283  Identities=17%  Similarity=0.225  Sum_probs=233.9

Q ss_pred             CCCcceeeeeeee-ccC---CC----CeEEEEeecCCC-CCCeEEEEEeeeecCccccccccC----CCC-CCCCCcccC
Q 019139            3 TEGQVITCKAAVA-WEP---NK----PLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSG----KDP-EGLFPCILG   68 (345)
Q Consensus         3 ~~~~~~~~~a~~~-~~~---~~----~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g----~~~-~~~~p~~~G   68 (345)
                      .+..|++|||+++ ..+   |.    .++++++|.|+| ++|||||||.++|||++|++.+.+    .++ +..+|.++|
T Consensus         2 ~~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G   81 (357)
T 2zb4_A            2 AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVD   81 (357)
T ss_dssp             ----CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCE
T ss_pred             CCcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccc
Confidence            3456789999999 565   43    399999999999 999999999999999999887765    232 236789999


Q ss_pred             cceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcce
Q 019139           69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST  148 (345)
Q Consensus        69 ~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~  148 (345)
                      ||++|+|++  +++++|++||||+..                                 +                  |+
T Consensus        82 ~E~~G~V~~--~~v~~~~vGdrV~~~---------------------------------~------------------G~  108 (357)
T 2zb4_A           82 GGGIGIIEE--SKHTNLTKGDFVTSF---------------------------------Y------------------WP  108 (357)
T ss_dssp             EEEEEEEEE--ECSTTCCTTCEEEEE---------------------------------E------------------EE
T ss_pred             ccEEEEEEe--cCCCCCCCCCEEEec---------------------------------C------------------CC
Confidence            999999999  888999999999742                                 1                  38


Q ss_pred             eeeeEEeecceEEEcCCCC-----ChhhhcccccchhhhhHHHHhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCC
Q 019139          149 FSQYTVVHDVSVAKIDPQA-----PLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGAS  220 (345)
Q Consensus       149 ~a~~~~v~~~~~~~iP~~l-----~~~~aa~~~~~~~ta~~al~~~~~~~~g--~~VlI~Ga-g~vG~~a~q~a~~~G~~  220 (345)
                      |+||+++|++.++++|+++     +++ +|+++++++|||+++.+..+++++  ++|+|+|+ |++|++++|+++..|+.
T Consensus       109 ~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~  187 (357)
T 2zb4_A          109 WQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCS  187 (357)
T ss_dssp             SBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCS
T ss_pred             cEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCC
Confidence            9999999999999999999     554 677888999999999888999999  99999998 99999999999999987


Q ss_pred             eEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC
Q 019139          221 RVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       221 ~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +|+++++++++.+.+++ +|++.++++.+  .++.+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|...
T Consensus       188 ~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~  263 (357)
T 2zb4_A          188 RVVGICGTHEKCILLTSELGFDAAINYKK--DNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQIS  263 (357)
T ss_dssp             EEEEEESCHHHHHHHHHTSCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGG
T ss_pred             eEEEEeCCHHHHHHHHHHcCCceEEecCc--hHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCcc
Confidence            89999999999898886 99999998876  567788888776689999999997 5599999999997 9999999753


Q ss_pred             CC-CceecCh-------hhhcc-ccEEEEeeecCCc--ccccHHHHHHHHhcccc
Q 019139          300 SG-QEISTRP-------FQLVT-GRVWKGTAFGGFK--SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       300 ~~-~~~~~~~-------~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~  343 (345)
                      .. ..+++++       ..++. ++++.|+..+.+.  ..++++++++++++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  318 (357)
T 2zb4_A          264 QYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKL  318 (357)
T ss_dssp             GTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCC
Confidence            21 1333321       34555 9999998764321  14668999999998875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.8e-41  Score=321.86  Aligned_cols=283  Identities=18%  Similarity=0.199  Sum_probs=227.3

Q ss_pred             CcceeeeeeeeccCCCC--eEE-EEeecCCC-CCCeEEEEEeeeecCccccccccCCCC-------------C--CCCCc
Q 019139            5 GQVITCKAAVAWEPNKP--LVI-EDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP-------------E--GLFPC   65 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~--~~~-~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~-------------~--~~~p~   65 (345)
                      ..+++|||+++.+++.+  +++ +++|.|+| ++|||||||.++|||++|++++.|..+             .  ..+|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            34568999999998754  888 99999985 999999999999999999999987531             1  23799


Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccC
Q 019139           66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG  145 (345)
Q Consensus        66 ~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~  145 (345)
                      ++|||++|+|+++|++|++|++||+|+..+..                           . .+                 
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~---------------------------~-~~-----------------  131 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP---------------------------W-KQ-----------------  131 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCT---------------------------T-SC-----------------
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCC---------------------------C-CC-----------------
Confidence            99999999999999999999999999864310                           0 12                 


Q ss_pred             cceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcC----CCCCCEEEEEcC-ChHHHHHHHHHHHcCCC
Q 019139          146 TSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK----VEPGSIVAVFGL-GTVGLAVAEGAKAAGAS  220 (345)
Q Consensus       146 ~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~----~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~  220 (345)
                       |+|+||+++|++.++++|+++++++||+++++++|||+++.+..+    +++|++|+|+|+ |++|++++|+|+.+|+ 
T Consensus       132 -G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-  209 (375)
T 2vn8_A          132 -GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-  209 (375)
T ss_dssp             -CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-
T ss_pred             -ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-
Confidence             499999999999999999999999999999999999999977788    899999999996 9999999999999999 


Q ss_pred             eEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEeccCC
Q 019139          221 RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       221 ~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +|++++ +++++++++++|++.++++.+  .++.+.+.+.  +++|++||++|++ .++..++++++++ |+++.+|...
T Consensus       210 ~Vi~~~-~~~~~~~~~~lGa~~v~~~~~--~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~  283 (375)
T 2vn8_A          210 HVTAVC-SQDASELVRKLGADDVIDYKS--GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPF  283 (375)
T ss_dssp             EEEEEE-CGGGHHHHHHTTCSEEEETTS--SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSH
T ss_pred             EEEEEe-ChHHHHHHHHcCCCEEEECCc--hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCc
Confidence            898887 578889999999999999876  5666666543  4899999999987 4568889999997 9999999743


Q ss_pred             CCCcee---cCh------hhhc--------cccEEEEeeecCCcccccHHHHHHHHhcccc
Q 019139          300 SGQEIS---TRP------FQLV--------TGRVWKGTAFGGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       300 ~~~~~~---~~~------~~~~--------~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      . ....   ++.      ..++        .+..+.+...  ....++++++++++++|++
T Consensus       284 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l  341 (375)
T 2vn8_A          284 L-LNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKI  341 (375)
T ss_dssp             H-HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSC
T ss_pred             c-cccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCc
Confidence            1 1110   111      1111        2334433321  1123567899999998864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.3e-42  Score=330.15  Aligned_cols=262  Identities=17%  Similarity=0.174  Sum_probs=221.2

Q ss_pred             cceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--------------------------
Q 019139            6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------------   59 (345)
Q Consensus         6 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------------------------   59 (345)
                      .+++|||++.......++++++|.|+|++|||||||.+++||++|++.+.|.++                          
T Consensus         4 ~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            4 SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             chhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            346899999875555699999999999999999999999999999999888531                          


Q ss_pred             ---CCCCCcccCcceeEEEEEeCCCC-CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCccccccc
Q 019139           60 ---EGLFPCILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI  135 (345)
Q Consensus        60 ---~~~~p~~~G~e~~G~Vv~~G~~v-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~  135 (345)
                         ..++|.++|||++|+|+++|++| ++|++||||+..+                                +       
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------~-------  124 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG--------------------------------G-------  124 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC--------------------------------S-------
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC--------------------------------C-------
Confidence               12578999999999999999999 8899999998532                                2       


Q ss_pred             CCCccccccCcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE--cCChHHHHHHHH
Q 019139          136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEG  213 (345)
Q Consensus       136 ~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~--Gag~vG~~a~q~  213 (345)
                                 |+|+||+++|++.++++|+++++++||++++...|||+++ +... ++|++|||+  |+|++|++++|+
T Consensus       125 -----------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~  191 (379)
T 3iup_A          125 -----------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQI  191 (379)
T ss_dssp             -----------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHH
T ss_pred             -----------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHH
Confidence                       3999999999999999999999999999999999999765 4444 899999999  459999999999


Q ss_pred             HHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhc-----c
Q 019139          214 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH-----K  287 (345)
Q Consensus       214 a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~-----~  287 (345)
                      |+.+|+ +|++++++++++++++++|+++++++++  .++.+.+.+++++ ++|++||++|++.+...++++++     +
T Consensus       192 a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~  268 (379)
T 3iup_A          192 CLKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS--PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKS  268 (379)
T ss_dssp             HHHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTS--TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTT
T ss_pred             HHHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC--hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcc
Confidence            999999 8999999999999999999999999987  6788899999888 99999999998776788888885     3


Q ss_pred             C----------CeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          288 G----------WGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       288 ~----------~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      +          .|+++.+|... ..+++++  .++. ++++.|++++.+
T Consensus       269 ~G~~~~~G~~~~g~iv~~G~~~-~~~~~~~--~~~~~~~~i~g~~~~~~  314 (379)
T 3iup_A          269 AREYSRYGSTTHKQVYLYGGLD-TSPTEFN--RNFGMAWGMGGWLLFPF  314 (379)
T ss_dssp             CCSCCTTCCCSCEEEEECCCSE-EEEEEEC--CCSCSCEEEEECCHHHH
T ss_pred             ccceeecccccCceEEEecCCC-CCccccc--cccccceEEEEEEeeee
Confidence            2          15666666532 2233333  4445 999999876644

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.2e-40  Score=305.48  Aligned_cols=262  Identities=20%  Similarity=0.243  Sum_probs=217.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+++++.+++++|.|+|++|||+|||.++|||++|++++.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            799999999987667899999999999999999999999999999987654 3689999999999998           9


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |||+...                               .+                  |+|+||+++|++.++++|++++
T Consensus        70 drV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~iP~~~~  100 (302)
T 1iz0_A           70 RRYAALV-------------------------------PQ------------------GGLAERVAVPKGALLPLPEGLS  100 (302)
T ss_dssp             EEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             cEEEEec-------------------------------CC------------------cceeeEEEEcHHHcEeCCCCCC
Confidence            9998532                               12                  3999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++||+++++++|||+++.+.. +++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++.
T Consensus       101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~  178 (302)
T 1iz0_A          101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA  178 (302)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence            9999999999999999997677 999999999998 9999999999999999 999999999999999999999988764


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC-
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF-  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~-  325 (345)
                      +. .++.+.+     +++|++|| +|+ .++..++++++++ |+++.+|.... ...++++..++. ++++.|+.++.+ 
T Consensus       179 ~~-~~~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~  248 (302)
T 1iz0_A          179 EV-PERAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWLTPLL  248 (302)
T ss_dssp             GH-HHHHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             cc-hhHHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCC-CCCCcCHHHHHhCCCeEEEEeccchh
Confidence            20 1232222     58999999 998 5599999999997 99999998543 223566666666 999999876432 


Q ss_pred             cccccHHHHHH---HHhcccc
Q 019139          326 KSRSQVPWLVD---KYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~---~~~~g~~  343 (345)
                      ...++++++++   ++++|+.
T Consensus       249 ~~~~~~~~~~~~~~l~~~g~l  269 (302)
T 1iz0_A          249 REGALVEEALGFLLPRLGREL  269 (302)
T ss_dssp             TCHHHHHHHHHHHGGGBTTTB
T ss_pred             hhHHHHHHHHhhhHHHHcCCc
Confidence            12467888888   8887764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.2e-38  Score=297.79  Aligned_cols=276  Identities=17%  Similarity=0.186  Sum_probs=226.2

Q ss_pred             cceeeeeeeeccC--C----CCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeC
Q 019139            6 QVITCKAAVAWEP--N----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG   79 (345)
Q Consensus         6 ~~~~~~a~~~~~~--~----~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G   79 (345)
                      .+++|||+++.+.  |    +.++++++|.|+|++|||||||.++|||+.|... .   .+..+|.++|||++|+|++. 
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE-
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec-
Confidence            4578999999885  3    3489999999999999999999999999988732 1   12346889999999999995 


Q ss_pred             CCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce
Q 019139           80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS  159 (345)
Q Consensus        80 ~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  159 (345)
                       ++++|++||||+..                                                    |+|+||+++|.+.
T Consensus        79 -~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~  105 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKG  105 (333)
T ss_dssp             -SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTT
T ss_pred             -CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHH
Confidence             57889999999731                                                    2899999999999


Q ss_pred             EEEcCCC----CChhh-hcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 019139          160 VAKIDPQ----APLDK-VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD  233 (345)
Q Consensus       160 ~~~iP~~----l~~~~-aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~  233 (345)
                      ++++|++    +++++ +|+++++++|||+++.+..++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++.+
T Consensus       106 ~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~  184 (333)
T 1v3u_A          106 LEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIA  184 (333)
T ss_dssp             EEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred             eEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            9999997    88887 47889999999999988889999999999998 9999999999999999 9999999999999


Q ss_pred             HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCC----ce-ecCh
Q 019139          234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ----EI-STRP  308 (345)
Q Consensus       234 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~----~~-~~~~  308 (345)
                      .++++|++.++|..+. .++.+.+.+.+.+++|++||++|... +..++++++++ |+++.+|......    .. .+++
T Consensus       185 ~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  261 (333)
T 1v3u_A          185 YLKQIGFDAAFNYKTV-NSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSP  261 (333)
T ss_dssp             HHHHTTCSEEEETTSC-SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCCC-------CCBCCCH
T ss_pred             HHHhcCCcEEEecCCH-HHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCH
Confidence            9999999988887642 45677777777668999999999854 89999999997 9999999754311    11 2355


Q ss_pred             hhhcc-ccEEEEeeecCCc---ccccHHHHHHHHhcccc
Q 019139          309 FQLVT-GRVWKGTAFGGFK---SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       309 ~~~~~-~~~i~g~~~~~~~---~~~~~~~~~~~~~~g~~  343 (345)
                      ..++. ++++.|+..+.+.   ..++++++++++++|+.
T Consensus       262 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l  300 (333)
T 1v3u_A          262 ESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKI  300 (333)
T ss_dssp             HHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCc
Confidence            55666 9999998765432   13567889999998865

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1e-38  Score=299.54  Aligned_cols=285  Identities=20%  Similarity=0.233  Sum_probs=225.4

Q ss_pred             CCCCCcceeeeeeeeccCCC-CeEEE--EeecCC-CCCCeEEEEEeeeecCccccccccCCCCC----CCCCcccCccee
Q 019139            1 MSTEGQVITCKAAVAWEPNK-PLVIE--DVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAA   72 (345)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~-~~~~~--~~~~p~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~   72 (345)
                      |++++....|+++++.+++. .++++  ++|.|. |++|||||||.++|+|+.|. .+.|.+..    ..+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            43333333455555555653 38888  889997 89999999999999988874 44454322    146899999999


Q ss_pred             EEEEE--eCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceee
Q 019139           73 GIVES--VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS  150 (345)
Q Consensus        73 G~Vv~--~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a  150 (345)
                      |++++  +|+++++|++||||+..                                                    |+|+
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~a  107 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWE  107 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESB
T ss_pred             cceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCce
Confidence            99999  99999999999999731                                                    3899


Q ss_pred             eeEEeecce--EEEcCC---CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 019139          151 QYTVVHDVS--VAKIDP---QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG  224 (345)
Q Consensus       151 ~~~~v~~~~--~~~iP~---~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~  224 (345)
                      ||++++.+.  ++++|+   +++++ +|+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|++
T Consensus       108 ey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~  185 (345)
T 2j3h_A          108 EYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVG  185 (345)
T ss_dssp             SEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             eEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEE
Confidence            999999876  999996   35554 67788899999999988889999999999998 9999999999999999 8999


Q ss_pred             EcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC--
Q 019139          225 IDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG--  301 (345)
Q Consensus       225 ~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~--  301 (345)
                      +++++++.+.++ ++|++.++|+.+. .++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|.....  
T Consensus       186 ~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~  262 (345)
T 2j3h_A          186 SAGSKEKVDLLKTKFGFDDAFNYKEE-SDLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNL  262 (345)
T ss_dssp             EESSHHHHHHHHHTSCCSEEEETTSC-SCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTC
T ss_pred             EeCCHHHHHHHHHHcCCceEEecCCH-HHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEcccccccc
Confidence            999999999998 7999999887652 356677777765689999999998 4699999999997 999999975321  


Q ss_pred             --CceecChhhhcc-ccEEEEeeecCCcc--cccHHHHHHHHhcccc
Q 019139          302 --QEISTRPFQLVT-GRVWKGTAFGGFKS--RSQVPWLVDKYMKKVN  343 (345)
Q Consensus       302 --~~~~~~~~~~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~  343 (345)
                        ....+++..++. ++++.|+..+.+..  .+.+.++++++++|++
T Consensus       263 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i  309 (345)
T 2j3h_A          263 ENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI  309 (345)
T ss_dssp             SSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSS
T ss_pred             CCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCC
Confidence              134566666666 99999987654321  2348889999999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.2e-38  Score=325.66  Aligned_cols=271  Identities=23%  Similarity=0.287  Sum_probs=223.1

Q ss_pred             eeeeeccCCCC--eEEEEeec--CCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           11 KAAVAWEPNKP--LVIEDVQV--APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        11 ~a~~~~~~~~~--~~~~~~~~--p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      ..+.+..+|.+  +++++.|.  |+|++|||+|||.++|||++|++++.|.++   .|.++|||++|+|+++|++|++|+
T Consensus       211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCC
Confidence            34445555543  78877764  568999999999999999999999998765   456899999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||+..                                .+                  |+|+||++++.+.++++|++
T Consensus       288 vGDrV~~~--------------------------------~~------------------G~~ae~~~v~~~~~~~iP~~  317 (795)
T 3slk_A          288 PGDRVMGM--------------------------------IP------------------KAFGPLAVADHRMVTRIPAG  317 (795)
T ss_dssp             TTCEEEEC--------------------------------CS------------------SCSSSEEEEETTSEEECCTT
T ss_pred             CCCEEEEE--------------------------------ec------------------CCCcCEEEeehHHEEECCCC
Confidence            99999743                                12                  39999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++ +.+.++ +|++++++
T Consensus       318 ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~  394 (795)
T 3slk_A          318 WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLAS  394 (795)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEEC
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheee
Confidence            9999999999999999999989999999999999997 9999999999999999 899988766 555555 99999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecC
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG  324 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  324 (345)
                      +++  .++.+.+.+.+++ ++|+|||++|++. +..++++++++ |+++.+|.........+  .....++++.++.+..
T Consensus       395 ~~~--~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~--~~~~~~~~~~~~~l~~  468 (795)
T 3slk_A          395 SRT--CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKTDVRDPVEV--ADAHPGVSYQAFDTVE  468 (795)
T ss_dssp             SSS--STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCSTTCCCHHHH--HHHSSSEEEEECCGGG
T ss_pred             cCC--hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccccccCcccc--cccCCCCEEEEeeccc
Confidence            887  6889999999998 9999999999855 89999999997 99999997543222222  1122377877765421


Q ss_pred             Cc---ccccHHHHHHHHhcccc
Q 019139          325 FK---SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~---~~~~~~~~~~~~~~g~~  343 (345)
                      ..   ..+.+.++++++++|++
T Consensus       469 ~~~~~~~~~l~~~~~l~~~g~l  490 (795)
T 3slk_A          469 AGPQRIGEMLHELVELFEGRVL  490 (795)
T ss_dssp             GHHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCHHHHHHHHHHHHHHHHcCCc
Confidence            11   12456777888877754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.95  E-value=2e-28  Score=275.62  Aligned_cols=254  Identities=16%  Similarity=0.196  Sum_probs=203.8

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecCccccccccCCCCCC-------CCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 019139           22 LVIEDVQVAP-PQ--AGEVRIKILFTALCHTDAYTWSGKDPEG-------LFPCILGHEAAGIVESVGEGVTEVQPGDHV   91 (345)
Q Consensus        22 ~~~~~~~~p~-~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~~-------~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd~V   91 (345)
                      +.+.+.+... +.  ++||+|||.++|+|+.|++++.|.++..       ..|.++|+|++|+|.          +||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence            5555554433 33  7999999999999999999998876432       246789999999872          79999


Q ss_pred             EecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCChhh
Q 019139           92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK  171 (345)
Q Consensus        92 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~  171 (345)
                      +...                               .+                  |+|+||+++|++.++++|+++++++
T Consensus      1614 ~g~~-------------------------------~~------------------G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV-------------------------------PA------------------EGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC-------------------------------SS------------------CCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee-------------------------------cC------------------CceeeEEEcccceEEEeCCCCCHHH
Confidence            7431                               22                  3999999999999999999999999


Q ss_pred             hcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCC
Q 019139          172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNP  246 (345)
Q Consensus       172 aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~  246 (345)
                      ||+++++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|++++.++++++++++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999999988899999999999987 9999999999999999 89999999999999886    788999988


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  325 (345)
                      ++  .++.+.+.+.+++ ++|+|||++++ ..+..++++++++ |+++.+|.........+....+.+++++.|+.+...
T Consensus      1724 ~~--~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 1799 (2512)
T 2vz8_A         1724 RD--TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSL 1799 (2512)
T ss_dssp             SS--SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGT
T ss_pred             CC--HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHH
Confidence            76  6788889998888 99999999985 5699999999997 999999963211112222333334999999876543


Q ss_pred             c--ccccHHHHHHHHh
Q 019139          326 K--SRSQVPWLVDKYM  339 (345)
Q Consensus       326 ~--~~~~~~~~~~~~~  339 (345)
                      .  ..+++.++++++.
T Consensus      1800 ~~~~~~~~~~~l~~l~ 1815 (2512)
T 2vz8_A         1800 FEEGGATWQEVSELLK 1815 (2512)
T ss_dssp             TSSCCHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHH
Confidence            2  1234555555544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.88  E-value=1.9e-22  Score=173.97  Aligned_cols=181  Identities=18%  Similarity=0.239  Sum_probs=137.0

Q ss_pred             ceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139          158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK  236 (345)
Q Consensus       158 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~  236 (345)
                      +.++++|+++++++||++++++.|||+++.+..++++|++|+|+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4678999999999999999999999999977889999999999996 9999999999999999 8999999999998999


Q ss_pred             hcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcccc
Q 019139          237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR  315 (345)
Q Consensus       237 ~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~  315 (345)
                      ++|++.+++..+  .++.+.+.+.+.+ ++|++||++|. ..+..++++++++ |+++.+|........++++..+.+++
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  156 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSA  156 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTC
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCCc
Confidence            999988888765  4567777777765 89999999986 4589999999997 99999997542122234433333489


Q ss_pred             EEEEeee------cCCcccccHHHHHHHHhcccc
Q 019139          316 VWKGTAF------GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       316 ~i~g~~~------~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      ++.++.+      +.....+++.++++++++|++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  190 (198)
T 1pqw_A          157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL  190 (198)
T ss_dssp             EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSS
T ss_pred             EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCc
Confidence            9987643      111123678999999999875

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.17  E-value=1.1e-11  Score=109.62  Aligned_cols=169  Identities=9%  Similarity=0.012  Sum_probs=111.5

Q ss_pred             CCCCCCEEEecC-------cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEee
Q 019139           84 EVQPGDHVIPCY-------QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH  156 (345)
Q Consensus        84 ~~~~Gd~V~~~~-------~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~  156 (345)
                      .+++||+|++.+       ...|+.|.+|+.|..+.|.....        ..|                  ...      
T Consensus         3 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~--------~~G------------------~~~------   50 (248)
T 2yvl_A            3 SFKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK--------PEG------------------VKI------   50 (248)
T ss_dssp             CCCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC--------CTT------------------EEE------
T ss_pred             cCCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC--------CCC------------------CEE------
Confidence            389999999987       77889999999999888875422        111                  222      


Q ss_pred             cceEEEcCCCCChhhhccc-----ccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          157 DVSVAKIDPQAPLDKVCLL-----GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       157 ~~~~~~iP~~l~~~~aa~~-----~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      ...+++.|+...+.+.+..     ..+...+  .+.....++++++||.+|+| .|.++..+++. +. ++++++.+++.
T Consensus        51 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~  125 (248)
T 2yvl_A           51 NGFEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEF  125 (248)
T ss_dssp             TTEEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHH
T ss_pred             EEEEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHH
Confidence            2334444433222222111     1122222  24466778899999999998 69999999998 66 99999999998


Q ss_pred             HHHHHhc----CC-ceE-eCCCCCCccHHHHHHhh-cCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          232 FDRAKNF----GV-TEF-VNPKDHDKPIQQVLVDL-TDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       232 ~~~~~~~----g~-~~~-i~~~~~~~~~~~~~~~~-~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+++.    +. +.+ +...+    +.+   .. ..+++|+|+...+.+ ..+..+.+.|+++ |++++.-.
T Consensus       126 ~~~a~~~~~~~~~~~~~~~~~~d----~~~---~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          126 YKTAQKNLKKFNLGKNVKFFNVD----FKD---AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHHHTTCCTTEEEECSC----TTT---SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHHHcCCCCcEEEEEcC----hhh---cccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            8877653    43 111 11111    111   11 223899999988876 6689999999998 99988754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.88  E-value=5.5e-09  Score=97.89  Aligned_cols=139  Identities=19%  Similarity=0.181  Sum_probs=98.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.++++++..  +++...  .++.+.+.     ++|++|+++
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH--HHHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 9999999999999888776543  232221  23333322     699999999


Q ss_pred             CCHHH------HHHHHHHhccCCeEEEEeccCCCCC-----ceecChhhhcc-ccEEEEeeecCCc---------ccccH
Q 019139          273 GNVSV------MRAALECCHKGWGTSVIVGVAASGQ-----EISTRPFQLVT-GRVWKGTAFGGFK---------SRSQV  331 (345)
Q Consensus       273 g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~~-----~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~  331 (345)
                      +.+..      ....++.++++ |+++.++...++.     ..+++...+.. ++++.|+.+-...         ....+
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            86442      46678899997 9999999754321     23455555555 8998886431111         12345


Q ss_pred             HHHHHHHhccc
Q 019139          332 PWLVDKYMKKV  342 (345)
Q Consensus       332 ~~~~~~~~~g~  342 (345)
                      +.+++++++|.
T Consensus       318 ~~l~~l~~~G~  328 (361)
T 1pjc_A          318 PYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHGG
T ss_pred             HHHHHHHhCCc
Confidence            67778777663

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.84  E-value=3.5e-11  Score=114.53  Aligned_cols=182  Identities=16%  Similarity=0.114  Sum_probs=128.9

Q ss_pred             cccCcceeEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCcccccc
Q 019139           65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM  144 (345)
Q Consensus        65 ~~~G~e~~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~  144 (345)
                      ...|+|.++.|.++|++++.+.+|+.+++....                        .++.                .+.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk------------------------~~~~----------------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK------------------------KAYD----------------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH------------------------HHHH----------------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHH------------------------HHHH----------------HHH
Confidence            357899999999999999999999987431100                        0000                011


Q ss_pred             CcceeeeeEEeecceEEEcCCCCChhhhcccccchhhhhHHHHhhc---CCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 019139          145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGLGTVGLAVAEGAKAAGASR  221 (345)
Q Consensus       145 ~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~---~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~  221 (345)
                      ..|++++|+..+...++.+|++++.+.++.. .+..++|.++....   .-.+|++|+|+|+|++|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            1237788888888888999998877776653 46778887663322   1257899999999999999999999999888


Q ss_pred             EEEEcCChhHH-HHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHH--HHHHHH--h--ccCCeEEEE
Q 019139          222 VIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM--RAALEC--C--HKGWGTSVI  294 (345)
Q Consensus       222 vi~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~--~~~~~~--l--~~~~G~~v~  294 (345)
                      |++++++.++. ++++++|++ ++++    .++.+.+     .++|+|+++++.+..+  ...+..  +  +++ +.+++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~  262 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRF----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI  262 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecH----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence            99999998886 677888875 3332    2333332     2699999999864422  144554  4  555 77788


Q ss_pred             eccC
Q 019139          295 VGVA  298 (345)
Q Consensus       295 ~G~~  298 (345)
                      ++..
T Consensus       263 vdia  266 (404)
T 1gpj_A          263 IDIA  266 (404)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            8774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.68  E-value=8.1e-08  Score=90.64  Aligned_cols=142  Identities=20%  Similarity=0.239  Sum_probs=94.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCC-------------C----ccHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-------------D----KPIQQ  255 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~-------------~----~~~~~  255 (345)
                      ++++|+|+|+|.+|+.++++++.+|+ +|++++++.++.+.++++|++.+ ++..+.             .    ....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999888888998754 222110             0    00112


Q ss_pred             HHHhhcCCCccEEEEcc---CC--HHH-HHHHHHHhccCCeEEEEeccCCCCC-ceecChhhhcc-ccEEEEeeecCCcc
Q 019139          256 VLVDLTDGGVDYSFECI---GN--VSV-MRAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLVT-GRVWKGTAFGGFKS  327 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~---g~--~~~-~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~-~~~i~g~~~~~~~~  327 (345)
                      .+.+... ++|++++++   |.  +.. ....++.++++ +.++.++...++. ....+...+.. ++++.|+...   .
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence            2333333 699999999   53  222 36788999997 9999999643221 12223334445 8999987642   1


Q ss_pred             cccHHHHHHHHhcc
Q 019139          328 RSQVPWLVDKYMKK  341 (345)
Q Consensus       328 ~~~~~~~~~~~~~g  341 (345)
                      ......+.+++.++
T Consensus       325 ~~~~~~a~~l~~~~  338 (384)
T 1l7d_A          325 SRVAADASPLFAKN  338 (384)
T ss_dssp             GGGHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHh
Confidence            12234466666554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.67  E-value=7.8e-08  Score=90.51  Aligned_cols=140  Identities=15%  Similarity=0.157  Sum_probs=95.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      ++++|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+++ +|++...+... ..++.+.+.     ++|++++++
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~l~~~l~-----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYELEGAVK-----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHHHHHHHc-----CCCEEEECC
Confidence            57899999999999999999999999 99999999999888776 77753232221 022322222     589999999


Q ss_pred             CCHHH------HHHHHHHhccCCeEEEEeccCCCC-----CceecChhhhcc-ccEEEEeeecCCcc---------cccH
Q 019139          273 GNVSV------MRAALECCHKGWGTSVIVGVAASG-----QEISTRPFQLVT-GRVWKGTAFGGFKS---------RSQV  331 (345)
Q Consensus       273 g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~-----~~~~~~~~~~~~-~~~i~g~~~~~~~~---------~~~~  331 (345)
                      +.+.+      ....++.++++ |+++.++...++     .+.+++...+.. ++++.++..-....         ...+
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~  318 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATM  318 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHH
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHH
Confidence            86543      57788999997 999999964332     244444444444 88877655322111         1223


Q ss_pred             HHHHHHHhcc
Q 019139          332 PWLVDKYMKK  341 (345)
Q Consensus       332 ~~~~~~~~~g  341 (345)
                      +.+++++.+|
T Consensus       319 ~~~~~l~~~g  328 (377)
T 2vhw_A          319 PYVLELADHG  328 (377)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhCC
Confidence            5666666665

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.65  E-value=7.6e-08  Score=90.37  Aligned_cols=140  Identities=22%  Similarity=0.242  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      ++++|+|+|+|++|+.+++.++.+|+ +|+++++++++.+.+++ +|.+...+..+ ..++.+.+.     ++|++++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EANIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHHHHHHHh-----CCCEEEECC
Confidence            35899999999999999999999999 99999999998887765 77663333322 122323322     689999999


Q ss_pred             CCHHH------HHHHHHHhccCCeEEEEeccCCCCC-----ceecChhhhcc-ccEEEEeeecCC---------cccccH
Q 019139          273 GNVSV------MRAALECCHKGWGTSVIVGVAASGQ-----EISTRPFQLVT-GRVWKGTAFGGF---------KSRSQV  331 (345)
Q Consensus       273 g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~~-----~~~~~~~~~~~-~~~i~g~~~~~~---------~~~~~~  331 (345)
                      +.+..      .+..++.++++ |+++.++...++.     +.+++...+.. ++++.|+.+-..         .....+
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~  316 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTL  316 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHH
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHH
Confidence            96542      56788899997 9999999754321     22334334445 888887642111         012445


Q ss_pred             HHHHHHHhcc
Q 019139          332 PWLVDKYMKK  341 (345)
Q Consensus       332 ~~~~~~~~~g  341 (345)
                      +.+++++.+|
T Consensus       317 ~~l~~l~~~g  326 (369)
T 2eez_A          317 PYVLKLAEKG  326 (369)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHhcC
Confidence            6777777665

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.50  E-value=5.9e-07  Score=85.12  Aligned_cols=125  Identities=18%  Similarity=0.222  Sum_probs=86.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCC-----------CccH----HHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDH-----------DKPI----QQVL  257 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~-----------~~~~----~~~~  257 (345)
                      ++.+|+|+|+|.+|+.++++|+.+|+ +|++++++.++.+.++++|++.+. +..+.           ..++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            57899999999999999999999999 899999999998888999986442 11100           0111    0123


Q ss_pred             HhhcCCCccEEEEccCCH-----HHH-HHHHHHhccCCeEEEEeccCCCCCceecChh-h--hcc-ccEEEEeee
Q 019139          258 VDLTDGGVDYSFECIGNV-----SVM-RAALECCHKGWGTSVIVGVAASGQEISTRPF-Q--LVT-GRVWKGTAF  322 (345)
Q Consensus       258 ~~~~~gg~d~v~d~~g~~-----~~~-~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~--~~~-~~~i~g~~~  322 (345)
                      .+... ++|++|++++.+     ..+ ...++.++++ +.++.++...+ ..++++.. .  +.. ++++.|+..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~G-g~v~~~~~~~p~~~~~gv~i~g~~~  321 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNG-GNCEYTVPGEIFTTENGVKVIGYTD  321 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT-CSBTTCCTTSEEECTTSCEEECCSC
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCC-CCcCcccCCCceEEECCEEEEeeCC
Confidence            33322 589999995321     223 6788999997 99999997422 23444322 2  344 999998754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.39  E-value=1.3e-06  Score=84.39  Aligned_cols=115  Identities=22%  Similarity=0.261  Sum_probs=87.5

Q ss_pred             hhhhHHHHhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHH
Q 019139          180 PTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV  258 (345)
Q Consensus       180 ~ta~~al~~~~-~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  258 (345)
                      .++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+.+.++++|++ ++       ++.+.+ 
T Consensus       258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-------~l~e~l-  327 (494)
T 3ce6_A          258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-------TVEEAI-  327 (494)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHG-
T ss_pred             hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-------cHHHHH-
Confidence            44555543222 26789999999999999999999999999 999999999998888999985 22       122221 


Q ss_pred             hhcCCCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139          259 DLTDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAASGQEISTRPFQLVT  313 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  313 (345)
                          .+.|+++++++....+. ..++.++++ |+++.+|...    .+++...+..
T Consensus       328 ----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~----~eId~~aL~~  374 (494)
T 3ce6_A          328 ----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD----NEIDMAGLER  374 (494)
T ss_dssp             ----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG----GGBCHHHHHH
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC----CccCHHHHHH
Confidence                26899999999876565 788999997 9999999742    2355555544

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.03  E-value=1.1e-05  Score=72.14  Aligned_cols=105  Identities=22%  Similarity=0.260  Sum_probs=73.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.....++++++||-+|+|. |.++..+++..+ ..+|++++.+++..+.+++    .+...-+....  .++.+.   +
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~---~  177 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDISEG---F  177 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGGGC---C
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHc---c
Confidence            45667789999999999976 888999999864 3499999999988887764    35411111111  111111   2


Q ss_pred             cCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.+|+|+.....+ ..+..+.+.|+++ |++++.-.
T Consensus       178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          178 DEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             cCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            224799999776665 5688899999997 99887753

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.02  E-value=1.9e-05  Score=74.29  Aligned_cols=125  Identities=18%  Similarity=0.199  Sum_probs=85.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC-------------CC-CCccH----HH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP-------------KD-HDKPI----QQ  255 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~-------------~~-~~~~~----~~  255 (345)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|++.+...             .. ....+    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            56899999999999999999999999 99999999999999999988632211             00 00000    11


Q ss_pred             HHHhhcCCCccEEEEccCCH-----H-HHHHHHHHhccCCeEEEEeccCCCCCceecC--hhhhcc-ccEEEEeee
Q 019139          256 VLVDLTDGGVDYSFECIGNV-----S-VMRAALECCHKGWGTSVIVGVAASGQEISTR--PFQLVT-GRVWKGTAF  322 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~g~~-----~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~--~~~~~~-~~~i~g~~~  322 (345)
                      .+.+.. .+.|++|.++..+     . .-+..++.++++ ..++.++...+ ..++.+  ...+.. ++++.|..+
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~G-G~~e~t~~~~~~~~~GV~~~gv~n  340 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERG-GNIEGAEAGKVTEVGGVRIVGHLN  340 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGT-CSBTTCCTTEEEEETTEEEEECSS
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCC-CCccccCCCCeEEECCEEEEEeCC
Confidence            222221 2699999986422     1 247888999997 99999986432 234332  112334 899998874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.93  E-value=1.6e-05  Score=74.14  Aligned_cols=124  Identities=22%  Similarity=0.243  Sum_probs=85.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC-------CCC----c----cHHHHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-------DHD----K----PIQQVLV  258 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~-------~~~----~----~~~~~~~  258 (345)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.++++|++.+ +..       ...    .    ...+.+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence            57899999999999999999999999 89999999999999999998633 210       000    0    0011222


Q ss_pred             hhcCCCccEEEEccCCH-----H-HHHHHHHHhccCCeEEEEeccCCCCCceecC-hh-hhcc-ccEEEEeee
Q 019139          259 DLTDGGVDYSFECIGNV-----S-VMRAALECCHKGWGTSVIVGVAASGQEISTR-PF-QLVT-GRVWKGTAF  322 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~~-----~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~-~~-~~~~-~~~i~g~~~  322 (345)
                      +.. ...|+||.++..+     . .....++.++++ +.++.++...++ .++.+ +- .+.. ++++.|..+
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG-~~e~t~~~~~~~~~gV~~~~v~n  330 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG-NCELTEPGRTIVHHGVTITSPLN  330 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTCEEEETTEEEECCSC
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC-ccccccCCCeEEECCEEEEeeCC
Confidence            222 3799999986322     1 237888999997 999999875433 33321 11 2334 888887764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.89  E-value=8.8e-05  Score=56.73  Aligned_cols=93  Identities=20%  Similarity=0.167  Sum_probs=64.6

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +.+|+|+|+|.+|...++.+...| + +|+++++++++.+.++..+...+. +..+     .+.+.+.. .++|++|+++
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD-----EAGLAKAL-GGFDAVISAA   77 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC-----HHHHHHHT-TTCSEEEECS
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC-----HHHHHHHH-cCCCEEEECC
Confidence            468999999999999999999999 6 899999999988888766655432 2222     12333333 2799999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEe
Q 019139          273 GNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +..........+.+.+ ..++.+
T Consensus        78 ~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CchhhHHHHHHHHHhC-CCEEEe
Confidence            8655333333444554 555544

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.89  E-value=1.8e-05  Score=70.26  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .++.+||.+|+|. |.++..+++.. |. ++++++.+++..+.+++.+....+...+. .++     .+..+.+|+|+..
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-----~~~~~~fD~v~~~  155 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-----PFSDTSMDAIIRI  155 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-----SBCTTCEEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhC-----CCCCCceeEEEEe
Confidence            6788999999987 99999999986 66 89999999999998887654322222210 111     1223479999964


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .. ...+..+.+.|+++ |++++...
T Consensus       156 ~~-~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          156 YA-PCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             SC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             CC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence            33 45589999999998 99988754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.88  E-value=4.6e-05  Score=61.97  Aligned_cols=92  Identities=20%  Similarity=0.221  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      ...++++|+|+|+|.+|...++.++..|+ +|+++++++++.+.++ +.|...+. ...  .+ .+.+.+....++|++|
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~--~~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDA--AE-FETLKECGMEKADMVF   89 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCT--TS-HHHHHTTTGGGCSEEE
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecC--CC-HHHHHHcCcccCCEEE
Confidence            34567899999999999999999999999 8999999998877766 56664332 211  11 2233332123799999


Q ss_pred             EccCCHHHHHHHHHHhcc
Q 019139          270 ECIGNVSVMRAALECCHK  287 (345)
Q Consensus       270 d~~g~~~~~~~~~~~l~~  287 (345)
                      .+++.......+...++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999987755555555554

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.85  E-value=0.00014  Score=68.69  Aligned_cols=101  Identities=28%  Similarity=0.342  Sum_probs=76.9

Q ss_pred             hHHHHhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          183 LGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       183 ~~al~~~~-~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++.+.. ..-.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +.       ++.+.+    
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~-------~Leeal----  273 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV-------KLNEVI----  273 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT----
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec-------cHHHHH----
Confidence            33443333 34589999999999999999999999999 899999988777667777753 11       222222    


Q ss_pred             CCCccEEEEccCCHHHHH-HHHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~  298 (345)
                       ...|+++.|.|....+. ..+..++++ +.++.+|..
T Consensus       274 -~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg  309 (435)
T 3gvp_A          274 -RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHS  309 (435)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSST
T ss_pred             -hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCC
Confidence             26899999988766565 888999997 999999874

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.83  E-value=5.1e-05  Score=68.44  Aligned_cols=100  Identities=15%  Similarity=0.114  Sum_probs=73.2

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ..+++++++||.+|+|+.+..++.+|+..|+ +|++++.+++..+.+++.    |.+.+ ....  .+..    ++..+.
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~--gDa~----~l~d~~  188 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV-NVIT--GDET----VIDGLE  188 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSE-EEEE--SCGG----GGGGCC
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCe-EEEE--Cchh----hCCCCC
Confidence            4678999999999998877777888888898 999999999988887653    54222 1111  1111    123358


Q ss_pred             ccEEEEccCCH---HHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIGNV---SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ||+|+.....+   ..++.+.+.|+|+ |++++...
T Consensus       189 FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          189 FDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             cCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            99999765533   4688899999998 99997753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.77  E-value=1.4e-05  Score=64.30  Aligned_cols=107  Identities=11%  Similarity=0.063  Sum_probs=74.8

Q ss_pred             chhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHhcCCceEeCCCCCCccHHHH
Q 019139          178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQV  256 (345)
Q Consensus       178 ~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~  256 (345)
                      +.+++++++ +......+.+|+|+|+|.+|...++.++..|+ +|++++++.++.+. +++++.+. ....    ++.+.
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~----~~~~~   77 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIN----DIDSL   77 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECS----CHHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-Eeec----CHHHH
Confidence            445666665 33333458999999999999999999888999 59999999887654 56777532 2222    23333


Q ss_pred             HHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          257 LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       257 ~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +.     ++|+++.+++....+. ....++++ +.++.++.+
T Consensus        78 ~~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           78 IK-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HH-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred             hc-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence            32     5899999999754221 22678887 899999874

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.77  E-value=2e-05  Score=72.59  Aligned_cols=106  Identities=22%  Similarity=0.197  Sum_probs=68.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCC---------------ceE-eCCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGV---------------TEF-VNPKD  248 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~---------------~~~-i~~~~  248 (345)
                      +.....++++++||-+|+|. |.+++.+++..|. .+|++++.+++..+.+++...               +.+ +...+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556789999999999976 8888888888763 489999999988877754211               111 11111


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      . .+.   ...+..+.+|+|+-....+ ..+..+.+.|+++ |++++...
T Consensus       176 ~-~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 I-SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             T-TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             h-HHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            0 110   0112223699888655544 3478889999998 99987653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.73  E-value=0.00043  Score=57.68  Aligned_cols=95  Identities=19%  Similarity=0.303  Sum_probs=68.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcC-CCccEEEEc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTD-GGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~-gg~d~v~d~  271 (345)
                      +++|+|+|+|.+|...++.++.. |+ +|+++++++++.+.+++.|...+. |..+     .+.+.+.++ .++|+++.+
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~-----~~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD-----PDFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC-----HHHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC-----HHHHHhccCCCCCCEEEEe
Confidence            56899999999999999999998 99 899999999999888888876443 3222     223344412 379999999


Q ss_pred             cCCHHHHHHHHHHhc---cCCeEEEEec
Q 019139          272 IGNVSVMRAALECCH---KGWGTSVIVG  296 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~---~~~G~~v~~G  296 (345)
                      +++......+...++   +. .+++...
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~-~~ii~~~  139 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYK-GQIAAIA  139 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCC-SEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCC-CEEEEEE
Confidence            998664444444444   43 4666543

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.72  E-value=0.00013  Score=64.20  Aligned_cols=105  Identities=23%  Similarity=0.243  Sum_probs=73.8

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.....++++++||-.|+|. |.++..+++..+ ..++++++.+++..+.+++.    |....+....  .++.+   .+
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~---~~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL--KDIYE---GI  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC--SCGGG---CC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE--Cchhh---cc
Confidence            45667789999999999975 888999999853 34999999999888877643    5432111111  11211   12


Q ss_pred             cCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  195 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTP  195 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEEC
Confidence            233799999877765 3589999999998 99988753

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.58  E-value=0.0012  Score=52.50  Aligned_cols=96  Identities=14%  Similarity=0.118  Sum_probs=68.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .++|+|.|.|.+|...++.++..|+ +|+++++++++.+.+++.|...+.-...   + .+.+.+..-..+|+++-++++
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~---~-~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAA---N-EEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTT---S-HHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCC---C-HHHHHhcCcccCCEEEEECCC
Confidence            4689999999999999999999999 8999999999999998888764432211   1 223333322379999999998


Q ss_pred             HHHHH---HHHHHhccCCeEEEEec
Q 019139          275 VSVMR---AALECCHKGWGTSVIVG  296 (345)
Q Consensus       275 ~~~~~---~~~~~l~~~~G~~v~~G  296 (345)
                      .....   ...+.+.+. .+++..-
T Consensus        82 ~~~n~~~~~~a~~~~~~-~~iiar~  105 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPD-IEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHHHCSS-SEEEEEE
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEEEE
Confidence            65322   334455665 6766544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.55  E-value=0.00026  Score=63.96  Aligned_cols=111  Identities=23%  Similarity=0.171  Sum_probs=78.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.+.+|+|+|+|.+|..+++.++.+|+ +|++.+++.++.+.++++|++. ++.    .++.+.+     ...|+++.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SKAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GGHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hhHHHHh-----cCCCEEEECC
Confidence            468999999999999999999999999 9999999988877777788652 221    1222221     2689999998


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEE
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKG  319 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  319 (345)
                      .....-...+..++++ +.++.++..+.  ..++  ..... ++++..
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~~--~~~~--~~a~~~Gv~~~~  264 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKPG--GTDF--RYAEKRGIKALL  264 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTTC--SBCH--HHHHHHTCEEEE
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCCC--CCCH--HHHHHCCCEEEE
Confidence            7533234567889997 99999986332  2333  23333 776643

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.48  E-value=0.00049  Score=61.22  Aligned_cols=104  Identities=22%  Similarity=0.300  Sum_probs=72.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc-----C--CceE-eCCCCCCccHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----G--VTEF-VNPKDHDKPIQQV  256 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~-----g--~~~~-i~~~~~~~~~~~~  256 (345)
                      +.....++++++||-+|+| .|.++..+++..+ ..++++++.+++..+.+++.     |  .+.+ +...+    +.+.
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d----~~~~  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD----LADS  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC----GGGC
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc----hHhc
Confidence            4466778999999999998 6888999998753 33899999999988877643     4  2221 11111    1110


Q ss_pred             HHhhcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          257 LVDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       257 ~~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                        .+..+.+|+|+.....+ ..+..+.+.|+++ |++++.-.
T Consensus       166 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 --ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             --CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence              11234799998776655 5688899999997 99988653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.46  E-value=0.00083  Score=59.06  Aligned_cols=78  Identities=19%  Similarity=0.107  Sum_probs=54.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe---CCCCCCccHHHHHHhhc--CCCccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+.....   |..+ +++..+.+.+..  -|++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD-PLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            368999988 9999999999999999 999999999887776655544332   2222 122222222222  1489999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      ++++|.
T Consensus        80 VNNAG~   85 (247)
T 3ged_A           80 VNNACR   85 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.45  E-value=0.0004  Score=62.02  Aligned_cols=104  Identities=23%  Similarity=0.295  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCc
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      -+|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|.....   |..+ .++..+.+.+..  .|++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN-LAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            36889999998 9999999999999999 999999999886654 566654332   3322 122222222222  2479


Q ss_pred             cEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          266 DYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       266 d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      |+++++.|..                         ...+.++..++++ |+++.+++..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~  162 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTA  162 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehh
Confidence            9999998841                         2234455567886 9999998643

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.44  E-value=0.00075  Score=63.88  Aligned_cols=93  Identities=24%  Similarity=0.253  Sum_probs=72.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ..-.|++|+|+|.|.+|...++.++.+|+ +|++++.+..+...+...|+. +.       ++.+.+.     ..|+++.
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv-------~LeElL~-----~ADIVv~  308 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV-------TLDDAAS-----TADIVVT  308 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC-------CHHHHGG-----GCSEEEE
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec-------cHHHHHh-----hCCEEEE
Confidence            35689999999999999999999999999 999999887766556666654 21       2322221     5899999


Q ss_pred             ccCCHHHH-HHHHHHhccCCeEEEEeccC
Q 019139          271 CIGNVSVM-RAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       271 ~~g~~~~~-~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +.|....+ ...+..++++ +.++.+|..
T Consensus       309 atgt~~lI~~e~l~~MK~G-AILINvGRg  336 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDM-CIVGNIGHF  336 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTT-EEEEECSSS
T ss_pred             CCCCccccCHHHHhcCCCC-eEEEEcCCC
Confidence            99876544 6888999997 999988864

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.41  E-value=0.00046  Score=65.28  Aligned_cols=111  Identities=18%  Similarity=0.228  Sum_probs=82.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .-.|.+|+|+|.|.+|...++.++.+|+ +|++++++..+...+...|....        ++.+.+     ...|+++.+
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------sL~eal-----~~ADVVilt  273 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------LVEDVV-----EEAHIFVTT  273 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------CHHHHT-----TTCSEEEEC
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------CHHHHH-----hhCCEEEEC
Confidence            3478999999999999999999999999 89999998887777777776421        232222     258999988


Q ss_pred             cCCHHHHH-HHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          272 IGNVSVMR-AALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       272 ~g~~~~~~-~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      .+....+. ..+..++++ ..++.+|-.    +.++++..+.. .+++.++.
T Consensus       274 ~gt~~iI~~e~l~~MK~g-AIVINvgRg----~vEID~~~L~~~~~~~~~ir  320 (436)
T 3h9u_A          274 TGNDDIITSEHFPRMRDD-AIVCNIGHF----DTEIQVAWLKANAKERVEVK  320 (436)
T ss_dssp             SSCSCSBCTTTGGGCCTT-EEEEECSSS----GGGBCHHHHHHHCSEEEEEE
T ss_pred             CCCcCccCHHHHhhcCCC-cEEEEeCCC----CCccCHHHHHhhcCceEeec
Confidence            88655443 677889997 888888742    45677777666 66666654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.39  E-value=0.00031  Score=67.40  Aligned_cols=91  Identities=26%  Similarity=0.319  Sum_probs=71.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.|++++|+|+|++|...++.++..|+ +|+++++++.+...+...|++ +.+..+            ....+|+++++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee------------~~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED------------VVSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG------------TTTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH------------HHHhcCEEEeCC
Confidence            478999999999999999999999999 999999998887777777753 211111            112689999999


Q ss_pred             CCHHHH-HHHHHHhccCCeEEEEeccC
Q 019139          273 GNVSVM-RAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       273 g~~~~~-~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |....+ ...+..++++ +.++.+|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            976655 3478889997 999999864

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.36  E-value=0.00054  Score=62.03  Aligned_cols=112  Identities=18%  Similarity=0.169  Sum_probs=78.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.+.+|+|+|+|.+|..+++.++.+|+ +|++.+++.++.+.++++|.. .++.    .++.    ++. ...|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~l~----~~l-~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DELK----EHV-KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GGHH----HHS-TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hhHH----HHh-hCCCEEEECC
Confidence            468899999999999999999999999 999999998887777777764 2221    1222    222 2689999998


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                      +....-...+..++++ +.++.++..+.  ..++  ..... ++++...
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g~~--~~~~--~~a~~~G~~~i~~  267 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASRPG--GTDF--KYAEKQGIKALLA  267 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSSTTC--SBCH--HHHHHHTCEEEEC
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCCCC--CcCH--HHHHHCCCEEEEC
Confidence            8643224567888997 99999986332  2333  22233 7766543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.34  E-value=0.00044  Score=60.62  Aligned_cols=104  Identities=17%  Similarity=0.203  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      +-.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+..+.-.+. ...|..+ +++..+.+ +.. |++|+++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~-~~~-g~iDiLV   83 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD-SQRLQRLF-EAL-PRLDVLV   83 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC-HHHHHHHH-HHC-SCCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC-HHHHHHHH-Hhc-CCCCEEE
Confidence            346899999998 9999999999999999 899999987765432211111 1123332 12233333 222 5899999


Q ss_pred             EccCCH-----------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          270 ECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       270 d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ++.|-.                       ...+.++..++.++|+||.+++..
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            998831                       122344455643239999998743

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.34  E-value=0.0026  Score=50.34  Aligned_cols=76  Identities=20%  Similarity=0.293  Sum_probs=57.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      ..+++|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+...+. |..+     .+.+.+..-.++|+++.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~-----~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTD-----ESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTC-----HHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCC-----HHHHHhCCcccCCEEEEecC
Confidence            4679999999999999999999999 899999999999888887764332 2221     23344432237999999999


Q ss_pred             CHH
Q 019139          274 NVS  276 (345)
Q Consensus       274 ~~~  276 (345)
                      +..
T Consensus        80 ~~~   82 (141)
T 3llv_A           80 DDE   82 (141)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.17  E-value=0.0037  Score=55.16  Aligned_cols=105  Identities=28%  Similarity=0.274  Sum_probs=68.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCC--CccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDH--DKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~--~~~~~~~~~~~~--~gg  264 (345)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+.....-+.  +++..+.+.+..  .|+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999988 9999999999999999 999999988765433    34555444322221  123333333322  248


Q ss_pred             ccEEEEccCCH-------------------------HHHHHHHHHh--ccCCeEEEEeccCC
Q 019139          265 VDYSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVAA  299 (345)
Q Consensus       265 ~d~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~G~~~  299 (345)
                      +|+++++.|..                         ...+.+++.+  +.++|+|+.+++..
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            99999998841                         1234445555  22249999998754

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.14  E-value=0.00093  Score=56.79  Aligned_cols=102  Identities=18%  Similarity=0.193  Sum_probs=70.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eE-eCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~-i~~~~~~~~~~~~~~~  259 (345)
                      +.....++++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++    .|.. .+ +...+    ..+.+. 
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d----~~~~~~-  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT----APAALA-  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----TTGGGT-
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc----hhhhcc-
Confidence            34566778999999999975 8888888888 77 99999999998877754    4544 22 11111    111111 


Q ss_pred             hcCCCccEEEEccCC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          260 LTDGGVDYSFECIGN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       ....+|+|+...+. ...++.+.+.|+++ |++++...
T Consensus       119 -~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          119 -DLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             -TSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence             11379999866443 22688888999998 99998765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.13  E-value=0.0029  Score=55.80  Aligned_cols=103  Identities=19%  Similarity=0.307  Sum_probs=64.1

Q ss_pred             CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC-c-eE--eCCCCCCccHHHHHHhhcC
Q 019139          194 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-T-EF--VNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~--vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~-~-~~--i~~~~~~~~~~~~~~~~~~  262 (345)
                      .+.++||+|+ |.  +|...++.+...|+ +|+.++++++..+.++    +.+. . ..  .|..+ .+++.+.+.+...
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHH
Confidence            4678999987 66  99999998889999 8998888765444333    3333 1 11  23333 2333333333222


Q ss_pred             --CCccEEEEccCCH--------------H---------------HHHHHHHHhccCCeEEEEeccCC
Q 019139          263 --GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 --gg~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                        +++|+++.+.|..              .               ..+.++..++++ |+++.+++..
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~  150 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYLG  150 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECGG
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEeccc
Confidence              3799999988731              0               223344455666 9999998643

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.11  E-value=0.0029  Score=52.76  Aligned_cols=100  Identities=18%  Similarity=0.211  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCC---------CeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhh
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA---------SRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDL  260 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~---------~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~  260 (345)
                      .++++++||-+|+|+ |.++..+++..|.         .+|++++.++...     ......+ ..+-......+.+...
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence            367899999999987 9999999999874         4899999887431     1111223 2111112233334444


Q ss_pred             cCC-CccEEEE-----ccCCH------------HHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDG-GVDYSFE-----CIGNV------------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~g-g~d~v~d-----~~g~~------------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+ .+|+|+.     +++..            ..+..+.+.|+++ |++++.-.
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 8999994     33432            4467788899998 99987644

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.08  E-value=0.0016  Score=51.39  Aligned_cols=76  Identities=21%  Similarity=0.396  Sum_probs=54.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +++|+|+|+|.+|...++.++..|+ +|+++++++++.+.+++.+...+. .+.  .+ .+.+.+..-+++|+++.+++.
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~--~~-~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA--TE-ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCT--TC-HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCC--CC-HHHHHhcCCCCCCEEEECCCC
Confidence            4679999999999999999999998 789999988887766665653222 111  11 233333322379999999997


Q ss_pred             H
Q 019139          275 V  275 (345)
Q Consensus       275 ~  275 (345)
                      .
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.04  E-value=0.0055  Score=52.81  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=66.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+.+|+|+|+ |.+|...+..+...|+ +|++++++.++.+.+...++..++..+-   .  +.+.+.. +++|++|.++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl---~--~~~~~~~-~~~D~vi~~a   92 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL---E--EDFSHAF-ASIDAVVFAA   92 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT---T--SCCGGGG-TTCSEEEECC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc---H--HHHHHHH-cCCCEEEECC
Confidence            4678999998 9999999999999999 9999999999887777666612222211   0  1222222 3799999998


Q ss_pred             CCHH-------------HHHHHHHHhcc-CCeEEEEeccCC
Q 019139          273 GNVS-------------VMRAALECCHK-GWGTSVIVGVAA  299 (345)
Q Consensus       273 g~~~-------------~~~~~~~~l~~-~~G~~v~~G~~~  299 (345)
                      |...             ....+++.++. +.++++.+++..
T Consensus        93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            8421             12233444432 227999988754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.03  E-value=0.0054  Score=53.12  Aligned_cols=78  Identities=14%  Similarity=0.236  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      +.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +++....   .|..+ .++..+.+.+..  .+++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence            468999998 9999999999889999 8999999988766543 3332211   23322 122222222221  247999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999884

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.01  E-value=0.0066  Score=52.83  Aligned_cols=80  Identities=14%  Similarity=0.122  Sum_probs=53.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCC--CccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~--~~~~~~~~~~~~~gg~d~  267 (345)
                      ..++.+|||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++.....+...+.  ...+.+.+.+.  +++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~   87 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDI   87 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCE
Confidence            356789999998 9999999999999999 8999999988766553 3433222222111  11222222222  47999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        88 li~~Ag~   94 (249)
T 3f9i_A           88 LVCNAGI   94 (249)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9999883

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.01  E-value=0.0032  Score=55.33  Aligned_cols=103  Identities=20%  Similarity=0.233  Sum_probs=66.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++....+   |..+ .++..+.+.+..  .+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD-LNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence            5789999998 9999999999999999 8999999988766553 44433222   3322 122222222221  24799


Q ss_pred             EEEEccCCH----------H---------------HHHHHHHHhccCCeEEEEeccCC
Q 019139          267 YSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       267 ~v~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +++.+.|..          .               ..+.++..++++ |+++.+++..
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  141 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVA  141 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChh
Confidence            999988731          1               123334445666 9999998643

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.99  E-value=0.0026  Score=55.53  Aligned_cols=105  Identities=17%  Similarity=0.103  Sum_probs=73.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhc-----CCceEeCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----GVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~-----g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      +.....++++++||-.|+|. |.++..+++..| ..+|++++.+++..+.+++.     |.+.+-...   .++.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~---~d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL---GKLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE---SCGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE---Cchhhc--C
Confidence            44667789999999999985 889999999864 33999999999988877653     532221111   111110  1


Q ss_pred             hcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          260 LTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +..+.+|+|+.....+ ..+..+.+.|+++ |+++++-.
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            2224799999776665 5688999999997 99988754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.98  E-value=0.0064  Score=52.68  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~d  270 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+++++++  ..++++...+ .|..+  ++..+.+.+..  .+++|+++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK--DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT--SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch--HHHHHHHHHHHHHcCCCCEEEE
Confidence            468999998 9999999999999999 89998888766  3344453222 23333  33333333322  147999999


Q ss_pred             ccC
Q 019139          271 CIG  273 (345)
Q Consensus       271 ~~g  273 (345)
                      +.|
T Consensus        77 ~Ag   79 (239)
T 2ekp_A           77 AAA   79 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.98  E-value=0.0026  Score=53.68  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=71.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~-i~~~~~~~~~~~~~~~~  260 (345)
                      +.....++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+.+ +...+    ..+.+.  
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~--  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF----APEGLD--  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC----TTTTCT--
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC----hhhhhh--
Confidence            34566788999999999984 8889999988644499999999998887754    343222 11111    100000  


Q ss_pred             cCCCccEEEEccC---CHHHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.+|+|+....   -...+..+.+.|+++ |++++...
T Consensus       105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            1137999997654   235578888999998 99998754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.96  E-value=0.0062  Score=53.87  Aligned_cols=79  Identities=29%  Similarity=0.305  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....+   |..+ .+++.+.+.+..  .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD-RKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC-HHHHHHHHHHHHHHcCCCC
Confidence            4688999998 9999999999999999 899999988776544 455554332   2222 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.96  E-value=0.0033  Score=56.06  Aligned_cols=102  Identities=22%  Similarity=0.246  Sum_probs=63.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HH----HHHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++ .+    .+++.+.+..+   |..+ .+++.+.+.+..  .
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 88888777543 22    23344543322   3322 122222222221  1


Q ss_pred             CCccEEEEccCCH----------H---------------HHHHHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++|+++++.|..          .               ..+.+++.++.. |+++.+++.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            4799999998831          1               124445555565 999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.95  E-value=0.0038  Score=55.14  Aligned_cols=103  Identities=14%  Similarity=0.052  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH---HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~---~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+   ++.+....   .|..+ +++..+.+.+..  -|+
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            5789999988 9999999999999999 888888877654433   33444322   23332 122222232222  148


Q ss_pred             ccEEEEccCCH------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          265 VDYSFECIGNV------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       265 ~d~v~d~~g~~------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|+++++.|-.                        ...+.++..++.++|+||.+++.
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            99999998841                        12334445554324999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.95  E-value=0.0059  Score=53.71  Aligned_cols=78  Identities=13%  Similarity=0.278  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCce--E--eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--F--VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~--~--i~~~~~~~~~~~~~~~~~-  261 (345)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+.    +++...  .  .|..+ +++..+.+.+.. 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence            5789999997 5  899999999999999 8999999887655443    334321  1  23332 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       -|++|+++++.|
T Consensus        83 ~~G~iD~lvnnAg   95 (256)
T 4fs3_A           83 DVGNIDGVYHSIA   95 (256)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             HhCCCCEEEeccc
Confidence             248999999877

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.94  E-value=0.0025  Score=52.11  Aligned_cols=104  Identities=19%  Similarity=0.217  Sum_probs=71.5

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eEeCCCCCCccHHHHHHhhc
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~i~~~~~~~~~~~~~~~~~  261 (345)
                      .....++++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++    .+.. .++...+    ..+.+.. .
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d----~~~~~~~-~   91 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG----APRAFDD-V   91 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC----TTGGGGG-C
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc----hHhhhhc-c
Confidence            3555678899999999985 8899999988744499999999988887764    4544 2221222    1111111 1


Q ss_pred             CCCccEEEEccCC--HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~--~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+.....  ...+..+.+.|+++ |++++...
T Consensus        92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             CSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            1579999965543  23689999999998 99997764

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.92  E-value=0.0009  Score=58.02  Aligned_cols=102  Identities=20%  Similarity=0.163  Sum_probs=70.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.+...++++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .|...+- ...  .+.   ...+.
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~--~d~---~~~~~  154 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVH-VIL--GDG---SKGFP  154 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEE-EEE--SCG---GGCCG
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcE-EEE--CCc---ccCCC
Confidence            3455678899999999998 69999999998874 89999999988777754    4443221 111  111   01122


Q ss_pred             CC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          262 DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       262 ~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+ ++|+|+.+..-......+.+.|+++ |++++.-
T Consensus       155 ~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          155 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            23 6999998766544457888999997 9887653

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.90  E-value=0.0045  Score=54.20  Aligned_cols=102  Identities=18%  Similarity=0.241  Sum_probs=65.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....+   |..+ .+++.+.+....  .+++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSS-EADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTC-HHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899999988766544 344433222   2222 122222222221  14799


Q ss_pred             EEEEccCCH----------H---------------HHHHHHHHhc-cCCeEEEEeccC
Q 019139          267 YSFECIGNV----------S---------------VMRAALECCH-KGWGTSVIVGVA  298 (345)
Q Consensus       267 ~v~d~~g~~----------~---------------~~~~~~~~l~-~~~G~~v~~G~~  298 (345)
                      +++.+.|..          .               ..+.++..++ .+ |+++.+++.
T Consensus        83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~  139 (253)
T 1hxh_A           83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASV  139 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCG
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcch
Confidence            999998731          1               2234444554 45 899999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.90  E-value=0.0043  Score=56.52  Aligned_cols=78  Identities=19%  Similarity=0.225  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC--ceE---eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~--~~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+.    ..+.  ...   .|..+ ...+.+.+....  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            4679999998 9999999999999999 8999999988765442    2232  111   23332 122333333221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            247999999988

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.89  E-value=0.0083  Score=52.66  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4688999998 9999999999999999 899999988775544 44544322   23332 122222232221  24799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.89  E-value=0.0061  Score=54.95  Aligned_cols=78  Identities=26%  Similarity=0.351  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    ..+....   .|..+ .+++.+.+.+..  .+
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLLG  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhCC
Confidence            5789999998 9999999999999999 8999999988765442    2343322   23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.87  E-value=0.0012  Score=57.00  Aligned_cols=101  Identities=16%  Similarity=0.173  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCccHHHHHHhhc-C
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT-D  262 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~--~i~~~~~~~~~~~~~~~~~-~  262 (345)
                      ....++.+||-+|+| .|..+..+++.....+|++++.+++..+.+++    .|...  .+...+    ..+.+.... .
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~~~~~~~~~  124 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD----ALQLGEKLELY  124 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC----GGGSHHHHTTS
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC----HHHHHHhcccC
Confidence            345678899999998 68888999998743399999999998877754    35421  121211    212122222 3


Q ss_pred             CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +.+|+|+.....   ...+..+.+.|+++ |++++..
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            489998876543   34577888899997 9998863

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.84  E-value=0.002  Score=55.89  Aligned_cols=103  Identities=16%  Similarity=0.114  Sum_probs=69.6

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc---
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---  261 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~---  261 (345)
                      ....++.+||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|....+....  .+..+.+..+.   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL--GSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHHHHHHHhhc
Confidence            344678899999997 5889999999874 3399999999988777754    35432111111  22333333221   


Q ss_pred             -----------C-CCccEEEEccCCH---HHHHHHHHHhccCCeEEEEec
Q 019139          262 -----------D-GGVDYSFECIGNV---SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       262 -----------~-gg~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G  296 (345)
                                 . +.+|+|+......   ..+..+.+.|+++ |++++-.
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       2 5799999775543   4468888999997 9998754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.83  E-value=0.0079  Score=51.14  Aligned_cols=92  Identities=21%  Similarity=0.225  Sum_probs=62.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|||+|+ |.+|...+..+...|+ +|++++++.++.+.+...+...+. |..+  .+. +.   +  +++|+||.++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d--~~~-~~---~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV--LTE-AD---L--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG--CCH-HH---H--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc--ccH-hh---c--ccCCEEEECCcc
Confidence            5899998 9999999999999999 999999998877655444443221 2222  111 11   1  379999999986


Q ss_pred             H----------HHHHHHHHHhccCCeEEEEecc
Q 019139          275 V----------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       275 ~----------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .          .....+++.++..+++++.+++
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          2234555555543278988864

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.83  E-value=0.0081  Score=53.00  Aligned_cols=78  Identities=18%  Similarity=0.285  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCCc
Confidence            4678999998 9999999999999999 899999998776554 34432211   23332 122222222221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++++.|
T Consensus        83 ~lvnnAg   89 (263)
T 2a4k_A           83 GVAHFAG   89 (263)
T ss_dssp             EEEEGGG
T ss_pred             EEEECCC
Confidence            9999987

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.81  E-value=0.011  Score=52.47  Aligned_cols=78  Identities=26%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .++..+.+.+..  .+++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899999988776544 34554332   23332 122222222221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.79  E-value=0.01  Score=50.57  Aligned_cols=97  Identities=8%  Similarity=0.052  Sum_probs=62.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh-HHHHHHhcCCce-Ee--CCCCCCccHHHHHHhhcCCCccEEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPK-KFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~-~~G~~~vi~~~~~~~-~~~~~~~~g~~~-~i--~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+|+|+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+...+... .+  |..+     .+.+.+.. .++|++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-----~~~~~~~~-~~~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-----PGXLEQAV-TNAEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC-----HHHHHHHH-TTCSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC-----HHHHHHHH-cCCCEEE
Confidence            46999998 999999888887 8999 8999999887 655543222222 22  2222     22333333 2689999


Q ss_pred             EccCCHH-HHHHHHHHhccC-CeEEEEeccCC
Q 019139          270 ECIGNVS-VMRAALECCHKG-WGTSVIVGVAA  299 (345)
Q Consensus       270 d~~g~~~-~~~~~~~~l~~~-~G~~v~~G~~~  299 (345)
                      .++|... ....+++.++.. .++++.+++..
T Consensus        79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           79 VGAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             ESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             EcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            9998632 144555555432 26899887643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.79  E-value=0.008  Score=53.86  Aligned_cols=102  Identities=18%  Similarity=0.232  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HH----HHHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++ .+    .+++.+....+   |..+ .+++.+.+.+..  .
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4689999998 9999999999999999 88888877543 22    22334543332   3322 122222222221  1


Q ss_pred             CCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++|+++.+.|..                          ...+.++..++++ |+++.+++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~  184 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASI  184 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCT
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEech
Confidence            4799999987631                          1223344455676 899998763

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.011  Score=52.27  Aligned_cols=102  Identities=22%  Similarity=0.299  Sum_probs=63.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH----HHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~----~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++ ++++.+.    +++.|.....   |..+ .+++.+.+.+..  .
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            5689999998 9999999999999999 7877744 4344332    2334544332   2222 122223333221  1


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++|+++.+.|..                         ...+.++..++++ |+++.+++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence            4799999998731                         1234445566676 999999763

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.78  E-value=0.011  Score=52.23  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    + .+....   .|..+ .++..+.+.+..  .
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 8999999887755432    1 343322   23333 233333333222  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.78  E-value=0.0092  Score=52.36  Aligned_cols=78  Identities=18%  Similarity=0.344  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHH-Hhc----CCceEe---CCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRA-KNF----GVTEFV---NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~-~~~----g~~~~i---~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++ .+.+ +++    +....+   |..+ .+++.+.+.+..  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            3678999998 9999999999999999 89998887765 4433 222    433222   2222 122222222221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus        81 ~g~iD~lv~~Ag   92 (260)
T 1x1t_A           81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            147999999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.78  E-value=0.0054  Score=54.43  Aligned_cols=78  Identities=22%  Similarity=0.374  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCC-ceE----eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV-TEF----VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~-~~~----i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+    +..+. ..+    .|..+ .+++.+.+.+..  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence            4678999998 9999999999999999 899999987765543    22332 111    23332 122222222221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|++|.+.|
T Consensus       109 ~g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 HSGVDICINNAG  120 (279)
T ss_dssp             HCCCSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            147999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.78  E-value=0.0094  Score=51.25  Aligned_cols=77  Identities=17%  Similarity=0.143  Sum_probs=50.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE--eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      +.+++|+|+ |++|...+..+...|+ +|++++++.++.+.+. +++-...  .|..+ .+++.+.+.+..  .+++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE-EGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            568999998 9999999999999999 8999999887765443 3331122  23332 122222222221  1479999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.009  Score=52.83  Aligned_cols=79  Identities=16%  Similarity=0.250  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    ..+....   .|..+ .++..+.+.+..  .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 8999999887755442    3344322   23332 122222222221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.77  E-value=0.0048  Score=55.85  Aligned_cols=102  Identities=14%  Similarity=0.215  Sum_probs=71.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.+...++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |....+....  .++    .++ 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGW----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCG----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CCh----HHC-
Confidence            45666788999999999976 8888899988888 999999999988877653    3321111111  111    112 


Q ss_pred             CCCccEEEEc-----cCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+..     .+.   ...+..+.+.|+|+ |++++...
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  195 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS  195 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            2579999876     432   34577888999998 99987654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.77  E-value=0.014  Score=49.43  Aligned_cols=92  Identities=17%  Similarity=0.224  Sum_probs=62.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|+|+|+ |.+|...++.+...|+ +|++++++.++.+.+. .+...+ .|..+  .+. +.   +  +++|++|.++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d--~~~-~~---~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD--LTL-SD---L--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG--CCH-HH---H--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC--hhh-hh---h--cCCCEEEECCcC
Confidence            5899998 9999999999999998 9999999888766543 333322 12222  111 11   1  379999999986


Q ss_pred             H--------HHHHHHHHHhccC-CeEEEEeccC
Q 019139          275 V--------SVMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       275 ~--------~~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      .        .....+++.++.. .++++.+++.
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            3        2345666666542 2688888763

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.76  E-value=0.011  Score=52.31  Aligned_cols=78  Identities=21%  Similarity=0.263  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCce---EeCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE---FVNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~---~i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+ .+++.+.+.+..  .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899999988765543    2333322   123333 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.75  E-value=0.0013  Score=55.90  Aligned_cols=101  Identities=19%  Similarity=0.247  Sum_probs=70.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC--CCeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCccHHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLV  258 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G--~~~vi~~~~~~~~~~~~~~----~g~~~~-i~~~~~~~~~~~~~~  258 (345)
                      +......+++++||.+|+| .|..+..+++..|  . +|++++.+++..+.+++    .+...+ +...+    ...   
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~~---  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVGD----GTL---  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC----GGG---
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC----ccc---
Confidence            3455678899999999998 5889999999886  5 89999999988777754    343321 11111    110   


Q ss_pred             hhc-CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          259 DLT-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       259 ~~~-~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ... .+.+|+|+....-....+.+.+.|+++ |++++.=
T Consensus       140 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~  177 (215)
T 2yxe_A          140 GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV  177 (215)
T ss_dssp             CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence            111 247999998766545457888999997 9987663

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.75  E-value=0.0045  Score=54.57  Aligned_cols=78  Identities=14%  Similarity=0.254  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+...   |..+ +++..+.+.+..  -|
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK-KKDVEEFVRRTFETYS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 9999999999999999 899999998876544    345654432   3322 122222222221  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++++.|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.75  E-value=0.0017  Score=54.98  Aligned_cols=101  Identities=17%  Similarity=0.078  Sum_probs=69.2

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~-i~~~~~~~~~~~~~~~~  260 (345)
                      +......+++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++    .+...+ +...+    ..+..  .
T Consensus        69 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~--~  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD----GWQGW--Q  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----GGGCC--G
T ss_pred             HHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC----cccCC--c
Confidence            3456678899999999997 48888888888 66 99999999988877754    343321 11111    11100  1


Q ss_pred             cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+.+|+|+....-....+.+.+.|+++ |++++.=
T Consensus       140 ~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          140 ARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             GGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             cCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence            1248999998765544456788999997 9887653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.75  E-value=0.013  Score=51.30  Aligned_cols=77  Identities=19%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+....   .|..+ .+++.+.+.+..  .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence            468999998 9999999999999999 8999999887654332    2343222   23332 122222222221  247


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.74  E-value=0.0096  Score=52.43  Aligned_cols=102  Identities=20%  Similarity=0.238  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc-----CCce-E--eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~-----g~~~-~--i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ +++     +... .  .|..+ ++++.+.+....  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 899999887765432 222     1111 1  23332 122222222221  


Q ss_pred             CCCccEEEEccCCH--H---------------HHHHHHHHhcc-----CCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNV--S---------------VMRAALECCHK-----GWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~--~---------------~~~~~~~~l~~-----~~G~~v~~G~~  298 (345)
                      .+++|+++.+.|..  .               ..+.+++.++.     . |+++.+++.
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           84 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence            14799999998841  0               12334445543     4 899999864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.74  E-value=0.011  Score=52.51  Aligned_cols=79  Identities=30%  Similarity=0.401  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .++..+.+.+..  .+++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999988 9999999999999999 899999988776554 34443322   23332 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.73  E-value=0.0089  Score=51.89  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcC--Cc-eE--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VT-EF--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g--~~-~~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++.  .. ..  .|..+ .+++.+.+....  .++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999999999 899999988765543 3332  11 12  23322 122222222221  147


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|++|.+.|
T Consensus        83 id~li~~Ag   91 (251)
T 1zk4_A           83 VSTLVNNAG   91 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.72  E-value=0.011  Score=51.88  Aligned_cols=78  Identities=22%  Similarity=0.414  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+....   .|..+ .+++.+.+.+..  .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999999999 8999999887655432    2243322   23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        84 ~id~lv~nAg   93 (262)
T 1zem_A           84 KIDFLFNNAG   93 (262)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.72  E-value=0.009  Score=52.82  Aligned_cols=103  Identities=23%  Similarity=0.280  Sum_probs=64.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH----HHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~----~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++ ++++.+.    ++..+....+   |..+ .++..+.+.+..  .
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ-VPEIVKLFDQAVAHF   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 7877654 4443332    2344543322   2222 122222332221  1


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +++|+++.+.|..                         ...+.++..++++ |+++.+++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            4799999998831                         1234555667776 9999998754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.72  E-value=0.0087  Score=53.72  Aligned_cols=104  Identities=21%  Similarity=0.259  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe--CCCCCCccHHHHHHhhc--
Q 019139          193 EPGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~--vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i--~~~~~~~~~~~~~~~~~--  261 (345)
                      -.+.++||+|+ |+  +|...++.+...|+ +|+.++++++..+.+    ++.+....+  |..+ .+++.+.+.+..  
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD-AASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHh
Confidence            35789999987 66  99999999999999 899988886543333    233432222  3332 122222222221  


Q ss_pred             CCCccEEEEccCCH-----------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          262 DGGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       262 ~gg~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      .+++|+++.+.|..                             ...+.++..++++ |+|+.+++..
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~  172 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG  172 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence            24799999998831                             1233445556676 9999998643

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.71  E-value=0.013  Score=51.63  Aligned_cols=78  Identities=22%  Similarity=0.361  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--c-eE--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~-~~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+ ++++.  . ..  .|..+ .+++.+.+.+..  .++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999999999 899998887665433 33332  1 11  23322 122222222221  147


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        93 id~li~~Ag  101 (278)
T 2bgk_A           93 LDIMFGNVG  101 (278)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999887

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.71  E-value=0.026  Score=43.93  Aligned_cols=76  Identities=21%  Similarity=0.310  Sum_probs=53.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ ++...+. +..+     .+.+.+..-.++|+++-++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~-----~~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK-----IKTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS-----HHHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCC-----HHHHHHcCcccCCEEEEee
Confidence            3579999999999999999999998 89999999888776653 5654222 2211     1223322223799999999


Q ss_pred             CCHH
Q 019139          273 GNVS  276 (345)
Q Consensus       273 g~~~  276 (345)
                      +...
T Consensus        78 ~~~~   81 (140)
T 1lss_A           78 GKEE   81 (140)
T ss_dssp             SCHH
T ss_pred             CCch
Confidence            9864

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.71  E-value=0.0066  Score=53.90  Aligned_cols=79  Identities=23%  Similarity=0.255  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899999988876544 34443222   23322 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.71  E-value=0.012  Score=52.31  Aligned_cols=102  Identities=22%  Similarity=0.298  Sum_probs=63.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHHHH----HhcCCceEe---CCCCCCccH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDRA----KNFGVTEFV---NPKDHDKPI  253 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~------------~~~~~~~----~~~g~~~~i---~~~~~~~~~  253 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++            .++.+.+    +..+....+   |..+ .++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHHH
Confidence            4689999998 9999999999999999 89988876            4433322    334443322   3332 1222


Q ss_pred             HHHHHhhc--CCCccEEEEccCCH--------H---------------HHHHHHHHhccCCeEEEEeccC
Q 019139          254 QQVLVDLT--DGGVDYSFECIGNV--------S---------------VMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       254 ~~~~~~~~--~gg~d~v~d~~g~~--------~---------------~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+.+.+..  .+++|+++.+.|..        .               ..+.++..+..+ |+++.+++.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  155 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEeccc
Confidence            22232221  14799999998831        1               123333445565 899998763

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.70  E-value=0.012  Score=51.38  Aligned_cols=78  Identities=23%  Similarity=0.297  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHhcCCceEe---CCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++++.  .+.+++.+....+   |..+ .+++.+.+.+..  .+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD-VAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence            3578999998 9999999999999999 89988887651  2222333443222   2222 122222222221  1479


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |+++.+.|
T Consensus        81 d~lv~~Ag   88 (255)
T 2q2v_A           81 DILVNNAG   88 (255)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.70  E-value=0.0092  Score=52.03  Aligned_cols=80  Identities=24%  Similarity=0.322  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCCCCC--CccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDH--DKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~--~~~~~~~~~~~~--~gg~d~  267 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.......-+.  .++..+.+.+..  .+++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4689999998 9999999999999999 899999988776544 44555433322221  122222222221  147999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.69  E-value=0.015  Score=50.75  Aligned_cols=41  Identities=24%  Similarity=0.323  Sum_probs=35.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999998 9999999999889999 899999988776544

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.69  E-value=0.018  Score=50.98  Aligned_cols=79  Identities=22%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHHH----HHhcCCceEe---CCCCCCccH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDR----AKNFGVTEFV---NPKDHDKPI  253 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~------------~~~~~~----~~~~g~~~~i---~~~~~~~~~  253 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++            .++.+.    ++..+....+   |..+ .+++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence            4689999998 9999999999999999 89988876            443332    2334443322   3322 1222


Q ss_pred             HHHHHhhc--CCCccEEEEccCC
Q 019139          254 QQVLVDLT--DGGVDYSFECIGN  274 (345)
Q Consensus       254 ~~~~~~~~--~gg~d~v~d~~g~  274 (345)
                      .+.+.+..  .+++|+++.+.|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            22232221  1479999999883

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.69  E-value=0.0066  Score=52.88  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++|...+ .|..+ .+++.+.+.+..  .+++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            3678999998 9999999999999999 899999988776554 34453222 23332 122222222221  1479999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +++.|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.68  E-value=0.012  Score=51.75  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+    ++.+....   .|..+ .+++.+.+....  .+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999889999 899999988775544    23343322   23322 122222222221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.++|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.67  E-value=0.0074  Score=54.30  Aligned_cols=78  Identities=18%  Similarity=0.220  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC---ce-E--eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV---TE-F--VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~---~~-~--i~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+.   .. .  .|..+ .+++.+.+.+.. 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 8999999887655432    2232   21 1  23332 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.+.|
T Consensus       103 ~~g~iD~lvnnAG  115 (297)
T 1xhl_A          103 KFGKIDILVNNAG  115 (297)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             147999999887

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.67  E-value=0.0069  Score=53.03  Aligned_cols=75  Identities=19%  Similarity=0.013  Sum_probs=49.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH---hcCCceEeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK---NFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.   ..+.+.... +.  ++..+.+.+..  .+++|+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~--~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SE--QEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CC--CSHHHHHHHHHHHHSCCCEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CH--HHHHHHHHHHHHHhCCCCEEE
Confidence            36899998 9999999999999999 8999888876655443   234432222 11  33333333222  14799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        78 ~nAg~   82 (254)
T 1zmt_A           78 SNDIF   82 (254)
T ss_dssp             EECCC
T ss_pred             ECCCc
Confidence            98873

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.67  E-value=0.023  Score=50.86  Aligned_cols=104  Identities=17%  Similarity=0.151  Sum_probs=63.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHH----HHHhcCCceEeCCCCC--CccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD----RAKNFGVTEFVNPKDH--DKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~----~~~~~g~~~~i~~~~~--~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.++++.  ++.+    .+++.+....+..-+.  .++..+.+.+..  .
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999998 9999999999999999 888887762  2222    2234555433322221  112222222221  1


Q ss_pred             CCccEEEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +++|+++.+.|..                          ...+.++..++++ |+|+.+++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~  188 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence            4799999988731                          1223344456676 9999998643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.65  E-value=0.014  Score=50.41  Aligned_cols=74  Identities=23%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEe--CCCCCCccHHHHHHhhcC--CCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV--NPKDHDKPIQQVLVDLTD--GGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i--~~~~~~~~~~~~~~~~~~--gg~d~  267 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. ++....++  |..+  .   +.+.+...  +++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--W---EATERALGSVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--H---HHHHHHHTTCCCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC--H---HHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 8999999887765443 33222233  2222  1   22222222  37999


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 3d3w_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.65  E-value=0.0077  Score=52.85  Aligned_cols=78  Identities=22%  Similarity=0.218  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHH----HhcCCce-E--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~~~~~~----~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+.. .|+ +|++++++.++.+.+    +..+... .  .|..+ .+++.+.+.+..  .
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHhc
Confidence            4678999998 9999998888887 899 899998887654433    2223321 2  23322 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|++|.++|
T Consensus        81 g~id~li~~Ag   91 (276)
T 1wma_A           81 GGLDVLVNNAG   91 (276)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.64  E-value=0.018  Score=49.41  Aligned_cols=105  Identities=16%  Similarity=0.132  Sum_probs=69.8

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHh----cCCc-eEeCCCCCCccHHHHHHhh
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~----~g~~-~~i~~~~~~~~~~~~~~~~  260 (345)
                      ...+.+++.+||=+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|.. .-+....  .+..+.+..+
T Consensus        50 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~--gda~~~l~~~  125 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL--SRPLDVMSRL  125 (221)
T ss_dssp             HHSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC--SCHHHHGGGS
T ss_pred             HhhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE--cCHHHHHHHh
Confidence            34445556799999987 588899999987  45 89999999988777753    4543 1122111  2333443334


Q ss_pred             cCCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.||+||-....   ...++.+.+.|+++ |.+++-..
T Consensus       126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn~  164 (221)
T 3dr5_A          126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLADA  164 (221)
T ss_dssp             CTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETTT
T ss_pred             cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            34589998854332   23478888999997 99887543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.0038  Score=55.77  Aligned_cols=79  Identities=20%  Similarity=0.245  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc---CCc--eE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVT--EF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~---g~~--~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++   +..  ..  .|..+ .+++.+.+.+..  .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRAEF  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5788999998 9999999999999999 8999999887655442 21   221  12  23333 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.62  E-value=0.0097  Score=53.46  Aligned_cols=79  Identities=19%  Similarity=0.302  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |  ++|...++.+...|+ +|+.++++++..+.+    ++.+....+  |..+ .+++.+.+.+..  .
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD-AESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4689999998 5  999999999889999 899998887544433    333433332  3332 122222232221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.60  E-value=0.014  Score=51.18  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+ .+++++.+.+    ++.+....+   |..+ .++..+.+.+..  .
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5788999998 9999999999999999 77775 7777665443    233443322   3322 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        81 g~id~lv~nAg   91 (258)
T 3oid_A           81 GRLDVFVNNAA   91 (258)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.58  E-value=0.0026  Score=53.64  Aligned_cols=134  Identities=17%  Similarity=0.262  Sum_probs=78.0

Q ss_pred             eeeeeEE-eecceEEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 019139          148 TFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       148 ~~a~~~~-v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      .|.+|.. .+....+.+++.+.+..+.... . ......+..  .++++.+||-+|+|. |..+..+++ .+..++++++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~-~~~~~~l~~--~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQT-T-QLAMLGIER--AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHHH-H-HHHHHHHHH--HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCcc-H-HHHHHHHHH--hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEE
Confidence            4666666 5667788888877655542111 0 001111111  156889999999975 777777776 4655999999


Q ss_pred             CChhHHHHHHh----cCCce--EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH---HHHHHHHHhccCCeEEEEecc
Q 019139          227 IDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS---VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       227 ~~~~~~~~~~~----~g~~~--~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+++..+.+++    .+...  ++.. +    +    .+...+.+|+|+....-..   .+..+.+.|+++ |++++...
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~-d----~----~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  160 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKT-S----L----LADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSGI  160 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEES-S----T----TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEec-c----c----cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEec
Confidence            99988777754    34332  2111 1    1    1122358999997654332   244555678997 99998654

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.58  E-value=0.0078  Score=50.22  Aligned_cols=102  Identities=23%  Similarity=0.246  Sum_probs=68.2

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCC-ceE-eCCCCCCccHHHHHHhhc
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGV-TEF-VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~-~~~-i~~~~~~~~~~~~~~~~~  261 (345)
                      ...++++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++    .|. ..+ +...+    +. .+....
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~~-~~~~~~   90 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG----HQ-NMDKYI   90 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC----GG-GGGGTC
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC----HH-HHhhhc
Confidence            34568899999999875 888888888864 2389999999988777754    343 111 11111    11 111223


Q ss_pred             CCCccEEEEccCC---------------HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+...+-               ...+..+.+.|+++ |+++++..
T Consensus        91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            3589999865432               24588889999998 99987753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.57  E-value=0.0083  Score=52.66  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCce-E--eCCCCCCccHHHHHHhhcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~-----g~~~-~--i~~~~~~~~~~~~~~~~~~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++     +... .  .|..+ .+++.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence            4678999998 9999999999989999 8999999887655432 22     2121 1  23332 12233333332222


Q ss_pred             -CccEEEEccC
Q 019139          264 -GVDYSFECIG  273 (345)
Q Consensus       264 -g~d~v~d~~g  273 (345)
                       ++|+++.+.|
T Consensus        84 ~gid~lv~~Ag   94 (260)
T 2z1n_A           84 GGADILVYSTG   94 (260)
T ss_dssp             TCCSEEEECCC
T ss_pred             cCCCEEEECCC
Confidence             4999999988

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.56  E-value=0.0056  Score=55.02  Aligned_cols=102  Identities=14%  Similarity=0.219  Sum_probs=71.9

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.....++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|...-+....  .++    .++ 
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~----~~~-  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGW----EEF-  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE--CCG----GGC-
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CCH----HHc-
Confidence            45667789999999999975 8889999998887 99999999988877754    34321111111  111    122 


Q ss_pred             CCCccEEEEccC-----C----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIG-----N----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g-----~----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+....     .          ...+..+.+.|+|+ |++++...
T Consensus       135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  184 (302)
T 3hem_A          135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  184 (302)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEE
T ss_pred             CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEE
Confidence            458999986422     1          25578888899998 99988765

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.55  E-value=0.013  Score=50.92  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++ ++++.+.+    +..+....   .|..+ .+++.+.+.+..  .
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            3678999998 9999999999999999 8888877 66654432    23343322   23332 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.55  E-value=0.025  Score=50.23  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhcC-
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~~-  262 (345)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    +..+....+   |..+ .++..+.+.+... 
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence            35788999998 9999999999999999 8888874 55543322    334443222   3333 2333333333221 


Q ss_pred             -CCccEEEEccCC
Q 019139          263 -GGVDYSFECIGN  274 (345)
Q Consensus       263 -gg~d~v~d~~g~  274 (345)
                       +++|+++.+.|.
T Consensus       105 ~g~iD~lvnnAg~  117 (280)
T 4da9_A          105 FGRIDCLVNNAGI  117 (280)
T ss_dssp             HSCCCEEEEECC-
T ss_pred             cCCCCEEEECCCc
Confidence             479999999885

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.54  E-value=0.0094  Score=52.37  Aligned_cols=78  Identities=14%  Similarity=0.185  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHH----HHhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~----~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+ .+++++.+.    +++.+....   .|..+ .++..+.+.+..  .
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            4689999998 9999999999999999 78777 555544332    233444322   23322 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        85 g~id~lv~nAg   95 (259)
T 3edm_A           85 GEIHGLVHVAG   95 (259)
T ss_dssp             CSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.54  E-value=0.0078  Score=53.83  Aligned_cols=77  Identities=19%  Similarity=0.192  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhcCCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++....   .|..+ .+++.+.+.+.  +++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~--~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQD-LSSVRRFADGV--SGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTC-HHHHHHHHHTC--CCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC-HHHHHHHHHhc--CCCCEE
Confidence            5689999998 9999999999999999 8999999988766554 3443222   22222 12222233222  579999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      +.++|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            999883

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.53  E-value=0.013  Score=51.52  Aligned_cols=78  Identities=12%  Similarity=0.190  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.+.+...   +.+.+    +..+....+   |..+ .++..+.+.+.. 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence            4689999998 9999999999999999 8888765433   22222    223433222   3332 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.+.|
T Consensus        88 ~~g~iD~lvnnAg  100 (262)
T 3ksu_A           88 EFGKVDIAINTVG  100 (262)
T ss_dssp             HHCSEEEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence             147999999988

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.53  E-value=0.0093  Score=52.38  Aligned_cols=78  Identities=22%  Similarity=0.216  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC--Cce-EeCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VTE-FVNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g--~~~-~i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++.  ... ..|..+ .+++.+.+.+..  .+++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 8999999887765543 332  211 123332 122222222221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.53  E-value=0.0086  Score=52.36  Aligned_cols=80  Identities=19%  Similarity=0.146  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c-C--Cce-EeCC--CCCCccHHHHHHhh-
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F-G--VTE-FVNP--KDHDKPIQQVLVDL-  260 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~-g--~~~-~i~~--~~~~~~~~~~~~~~-  260 (345)
                      -.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    . +  ... ..|.  .+ .++..+.+.+. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~   87 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT-SENCQQLAQRIA   87 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCC-HHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCC-HHHHHHHHHHHH
Confidence            35789999998 9999999999999999 89999999877554421    1 2  111 1233  21 12222222222 


Q ss_pred             -cCCCccEEEEccCC
Q 019139          261 -TDGGVDYSFECIGN  274 (345)
Q Consensus       261 -~~gg~d~v~d~~g~  274 (345)
                       ..+++|+++.+.|.
T Consensus        88 ~~~g~id~lv~nAg~  102 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGL  102 (252)
T ss_dssp             HHCSCCSEEEECCCC
T ss_pred             HhCCCCCEEEECCcc
Confidence             12479999999873

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.52  E-value=0.015  Score=51.03  Aligned_cols=96  Identities=24%  Similarity=0.412  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ++++++||-+|+|. |.+++.+++ .|+ +|++++.++...+.+++    .+..  +....  .++.+.   +..+.+|+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~--~d~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLE--GSLEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEE--SCHHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEE--CChhhc---CcCCCCCE
Confidence            57889999999975 777777666 688 99999999988777754    3433  11111  223322   23458999


Q ss_pred             EEEccCC---HHHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGN---VSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |+...-.   ...+..+.+.|+++ |++++.+..
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            9976432   23467777889997 999988754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.52  E-value=0.0059  Score=54.45  Aligned_cols=78  Identities=21%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE----eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF----VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~----i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+...+    .|..+ .+.+.+.+.+..  .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            3678999998 9999999999999999 8999999887765432    2343222    23322 122222222221  1


Q ss_pred             CCccEEEEc-cC
Q 019139          263 GGVDYSFEC-IG  273 (345)
Q Consensus       263 gg~d~v~d~-~g  273 (345)
                      +++|+++.+ .|
T Consensus       105 g~iD~li~naag  116 (286)
T 1xu9_A          105 GGLDMLILNHIT  116 (286)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999988 44

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.51  E-value=0.0086  Score=52.35  Aligned_cols=79  Identities=16%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----c--C-Cc-eE--eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--G-VT-EF--VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~--g-~~-~~--i~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .  + .. ..  .|..+ .++..+.+.+.. 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHHH
Confidence            4678999998 9999999998888999 89999999877654432    1  2 11 11  23332 122222232221 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .+++|+++.+.|.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             1479999999884

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.50  E-value=0.012  Score=52.18  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc---C---Cce-E--eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---G---VTE-F--VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~---g---~~~-~--i~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++   .   ... .  .|..+ .+++.+.+.+.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence            3678999998 9999999999888999 8999999887655432 22   1   111 1  23332 122222222221 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .+++|+++.+.|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KFGKLDILVNNAGA   96 (278)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HcCCCCEEEECCCC
Confidence             1479999999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.50  E-value=0.018  Score=51.09  Aligned_cols=77  Identities=23%  Similarity=0.185  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHH---HHHhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQ---VLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~---~~~~~~~  262 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.+    +..+....   .|..+ ..+..+   .+.+.  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~--  107 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEAI--  107 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHh--
Confidence            4688999998 9999999999999999 899988887654433    23344322   23332 122222   23233  


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       108 g~iD~lvnnAg~  119 (275)
T 4imr_A          108 APVDILVINASA  119 (275)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999999883

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.50  E-value=0.0037  Score=54.67  Aligned_cols=103  Identities=18%  Similarity=0.203  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC-C
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG-G  264 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g-g  264 (345)
                      ...++.+||-+|+|. |..++.+|+..+ ..+|++++.+++..+.+++    .|...-+....  .+..+.+..+... .
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE--GPALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHhcCCCCC
Confidence            456788999999874 888888988874 3499999999988877754    35432111111  2344444444333 8


Q ss_pred             ccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+|+-....   ...+..+.+.|+++ |.+++-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            9999843222   24578888999998 99887654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.50  E-value=0.02  Score=50.00  Aligned_cols=96  Identities=19%  Similarity=0.230  Sum_probs=62.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC--CCccEEEEc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~--gg~d~v~d~  271 (345)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.     ....++..+ .++..+.+.+...  +++|+++.+
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d-~~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG-EEEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS-HHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC-HHHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999998 9999999999999999 89999888765321     112233322 1233333333322  379999999


Q ss_pred             cCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .|..                          ...+.+...++++ |+++.+++.
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            8830                          1133444556676 999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.49  E-value=0.0044  Score=54.69  Aligned_cols=78  Identities=15%  Similarity=0.099  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++ .+.+++.+...+ .|..+ .+++.+.+.+..  .+++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence            3578999998 9999999999999999 78888887765 344455554322 23332 122222222221  2479999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus       104 v~nAg  108 (260)
T 3gem_A          104 VHNAS  108 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.49  E-value=0.0047  Score=52.93  Aligned_cols=104  Identities=17%  Similarity=0.193  Sum_probs=69.1

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC--
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+..++.+||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+....  .+..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE--cCHHHHHHHHHhcC
Confidence            345677899999997 6888899998763 3399999999988777754    34421111111  233333333322  


Q ss_pred             --CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          263 --GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 --gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                        +.+|+|+-....   ...+..+.+.|+++ |.+++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence              479988854332   24578888999997 99988654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.49  E-value=0.028  Score=48.89  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHhc--CCce-E--eCCCCCC-ccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNF--GVTE-F--VNPKDHD-KPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~~~~--g~~~-~--i~~~~~~-~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+++|+.+++++  +..+.+++.  +... .  .|..+ + +++.+.+.+..  .
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC-ChHHHHHHHHHHHHhc
Confidence            3678999988 99999999999999994488877765  333333332  2221 1  23332 1 22333333221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        83 g~id~lv~~Ag   93 (254)
T 1sby_A           83 KTVDILINGAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999988

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.48  E-value=0.015  Score=53.67  Aligned_cols=99  Identities=27%  Similarity=0.241  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC---Ccc----------H-HHHHH
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---DKP----------I-QQVLV  258 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~---~~~----------~-~~~~~  258 (345)
                      -+|.+|.|+|.|.+|+.+++.++.+|+ +|++.+.+..+.+++++++++.+ +..+.   +.+          + .+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            478999999999999999999999999 89999888777666777776432 11100   000          0 01111


Q ss_pred             hhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .   -+.++++++...+.+.+.+.+.|..+ |.++.-+.
T Consensus       251 ~---lk~~iVie~AN~p~t~~eA~~~L~~~-gIlv~Pd~  285 (355)
T 1c1d_A          251 T---LDCSVVAGAANNVIADEAASDILHAR-GILYAPDF  285 (355)
T ss_dssp             H---CCCSEECCSCTTCBCSHHHHHHHHHT-TCEECCHH
T ss_pred             h---CCCCEEEECCCCCCCCHHHHHHHHhC-CEEEECCe
Confidence            1   15678888777665334566777776 76665543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.48  E-value=0.01  Score=51.28  Aligned_cols=96  Identities=23%  Similarity=0.284  Sum_probs=59.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC--CccHHH---HHHhhcC-CCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQ---VLVDLTD-GGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~---~~~~~~~-gg~d~  267 (345)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+     + ...+..-+.  .+++.+   .+.+..+ +++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----D-SNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----S-EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----c-ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            468999998 9999999999999999 8999888766421     1 111111111  111211   2222222 58999


Q ss_pred             EEEccCC--------HH------------------HHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGN--------VS------------------VMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ++.+.|.        ..                  ..+.++..++++ |+++.+++.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  131 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  131 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            9999882        11                  123344455566 899998864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.47  E-value=0.0038  Score=55.28  Aligned_cols=79  Identities=14%  Similarity=0.136  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+....... ..|..+ .+++.+.+.+..  .+++|+++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD-KYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC-HHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999998 9999999999999999 8999989877654332211111 123322 122222222221  24799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.47  E-value=0.018  Score=50.71  Aligned_cols=77  Identities=18%  Similarity=0.111  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcC--CceE---eCCCCCCccHHHHHHhhcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFG--VTEF---VNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g--~~~~---i~~~~~~~~~~~~~~~~~~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+  ....   .|..+  .+..+.+.+. -+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~-~g   84 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT--EQGCQDVIEK-YP   84 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS--HHHHHHHHHH-CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC--HHHHHHHHHh-cC
Confidence            4678999998 9999999999999999 8999999887654332    222  2111   12222  2222222222 24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        85 ~id~lv~nAg~   95 (267)
T 3t4x_A           85 KVDILINNLGI   95 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.46  E-value=0.016  Score=51.16  Aligned_cols=103  Identities=18%  Similarity=0.263  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--  261 (345)
                      ..+.++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    +..+....+   |..+ .+++.+.+.+..  
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEA  102 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            35789999998 9999999988888999 77776 4454443332    334443322   3332 122222222221  


Q ss_pred             CCCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       262 ~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+++|+++.+.|..                         ...+.++..++.+ |+++.+++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence            14799999998731                         1233455566776 999999763

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.46  E-value=0.0051  Score=53.93  Aligned_cols=75  Identities=28%  Similarity=0.268  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHhcCCceEe---CCCCCCccHHHHHHhh-cCCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDL-TDGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~-~~gg~d  266 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++  +..+.+++.|.+...   |..+. ..    +.+. ..+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~-~~----v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADP-LA----AKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTST-TT----TTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCH-HH----HHHHHHhCCCC
Confidence            4789999988 9999999999999999 888888764  445566677765433   32221 11    1222 235899


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.46  E-value=0.021  Score=49.74  Aligned_cols=102  Identities=17%  Similarity=0.163  Sum_probs=71.8

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce----EeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE----FVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~----~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.....++++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++.....    ++..+-  .++     .+.
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~--~~~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI--LTK-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT--TTC-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc--ccC-----CCC
Confidence            4466678899999999997 68888889887787 9999999999999888754321    111111  000     122


Q ss_pred             CCCccEEEEccCC--------HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+..-.-        ...+..+.+.|+|+ |++++...
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            3489999975321        23467788899998 99988764

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.46  E-value=0.017  Score=49.65  Aligned_cols=78  Identities=15%  Similarity=0.199  Sum_probs=50.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-----hcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-----~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.     ..+....+   |..+ .+++.+.+.+..  .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhcC
Confidence            578999998 9999999999999999 8999999887655432     33443322   3322 112222111111  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.44  E-value=0.026  Score=50.02  Aligned_cols=80  Identities=24%  Similarity=0.372  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhHHHHH----HhcCCceEe---CCCCCCc
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-------------DPKKFDRA----KNFGVTEFV---NPKDHDK  251 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-------------~~~~~~~~----~~~g~~~~i---~~~~~~~  251 (345)
                      -.+.++||+|+ |++|...++.+...|+ +|+++++             ++++.+.+    +..+.....   |..+ .+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~   90 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-DA   90 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-HH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence            35789999998 9999999999999999 8988876             45544433    233443322   3332 12


Q ss_pred             cHHHHHHhhc--CCCccEEEEccCC
Q 019139          252 PIQQVLVDLT--DGGVDYSFECIGN  274 (345)
Q Consensus       252 ~~~~~~~~~~--~gg~d~v~d~~g~  274 (345)
                      +..+.+.+..  .+++|+++.+.|.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222222221  2479999999883

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.44  E-value=0.0056  Score=52.44  Aligned_cols=87  Identities=14%  Similarity=0.210  Sum_probs=58.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++++             .|..+ +++..+.+.++  +++|+++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh--CCCCEEEECC
Confidence            4578999998 9999999998888899 8988877654             23332 12233333333  5789999888


Q ss_pred             CCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          273 GNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       273 g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |..                          ...+.+++.++++ |+++.+++.
T Consensus        68 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           68 GSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            731                          1223334455666 999999864

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.44  E-value=0.0083  Score=51.33  Aligned_cols=102  Identities=17%  Similarity=0.112  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-----CCeEEEEcCChhHHHHHHhc----C-----CceE-eCCCCCCccHHH
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-----ASRVIGIDIDPKKFDRAKNF----G-----VTEF-VNPKDHDKPIQQ  255 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-----~~~vi~~~~~~~~~~~~~~~----g-----~~~~-i~~~~~~~~~~~  255 (345)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++..+.+++.    +     ...+ +...+....+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            578899999999976 888999999876     12899999999887777542    3     1111 111110011100


Q ss_pred             HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..  ...+.+|+|+........+..+.+.|+++ |++++.-
T Consensus       156 ~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          156 EK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             HH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             cC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            00  11247999998766556578889999997 9987764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.42  E-value=0.015  Score=50.10  Aligned_cols=74  Identities=19%  Similarity=0.175  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEe--CCCCCCccHHHHHHhhcC--CCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV--NPKDHDKPIQQVLVDLTD--GGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i--~~~~~~~~~~~~~~~~~~--gg~d~  267 (345)
                      ++.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .....++  |..+     .+.+.+...  +++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD-----WDATEKALGGIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC-----HHHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCC-----HHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 89999998877654432 3212222  2222     122333222  37899


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      ++.+.|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999988

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.42  E-value=0.014  Score=51.32  Aligned_cols=78  Identities=24%  Similarity=0.440  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++    +....   .|..+ .+++.+.+.+..  .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 8999999887654432 22    43322   23332 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        84 g~id~lv~~Ag   94 (263)
T 3ai3_A           84 GGADILVNNAG   94 (263)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.42  E-value=0.009  Score=53.12  Aligned_cols=79  Identities=20%  Similarity=0.260  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4689999998 9999999999999999 899999987765443    23333222   23332 122222333221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.41  E-value=0.021  Score=49.90  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++ ++++.+.+    ++.+....   .|..+ .+++.+.+.+..  .
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            3678999998 9999999998888999 8988888 66554432    22343322   23322 122222232221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|++|.+.|
T Consensus        84 g~id~li~~Ag   94 (261)
T 1gee_A           84 GKLDVMINNAG   94 (261)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.40  E-value=0.032  Score=49.36  Aligned_cols=79  Identities=23%  Similarity=0.300  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhHHHHH----HhcCCceEe---CCCCCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-------------DPKKFDRA----KNFGVTEFV---NPKDHDKP  252 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-------------~~~~~~~~----~~~g~~~~i---~~~~~~~~  252 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+++++             +.++.+.+    +..+....+   |..+ .++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FDR   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence            5689999998 9999999999999999 8998877             44443322    233443322   3322 122


Q ss_pred             HHHHHHhhc--CCCccEEEEccCC
Q 019139          253 IQQVLVDLT--DGGVDYSFECIGN  274 (345)
Q Consensus       253 ~~~~~~~~~--~gg~d~v~d~~g~  274 (345)
                      +.+.+.+..  .+++|+++.+.|.
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            222232221  1479999999873

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.40  E-value=0.013  Score=51.41  Aligned_cols=78  Identities=17%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHH---hhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLV---DLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~---~~~~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    +..+....   .|..+ .+++.+.+.   +..+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH   85 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899999988765433    22343322   23332 122222222   2222


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        86 g~id~lv~~Ag   96 (260)
T 2ae2_A           86 GKLNILVNNAG   96 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            57999999988

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.39  E-value=0.0079  Score=53.43  Aligned_cols=96  Identities=14%  Similarity=0.069  Sum_probs=62.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +|||+|+ |.+|...++.+... |+ +|++++++.++...+...+...+ .|..+     .+.+.+... ++|+||.+.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d-----~~~l~~~~~-~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN-----QESMVEAFK-GMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC-----HHHHHHHTT-TCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC-----HHHHHHHHh-CCCEEEEeCC
Confidence            5899998 99999999888877 88 89999898876544433344322 22322     223333332 7999999988


Q ss_pred             CH-------HHHHHHHHHhccC-CeEEEEeccCC
Q 019139          274 NV-------SVMRAALECCHKG-WGTSVIVGVAA  299 (345)
Q Consensus       274 ~~-------~~~~~~~~~l~~~-~G~~v~~G~~~  299 (345)
                      ..       .....+++.++.. -++++.+++..
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            42       2234555665543 14888888754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.39  E-value=0.01  Score=51.87  Aligned_cols=77  Identities=16%  Similarity=0.216  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHH---HHHHhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQ---QVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~---~~~~~~~~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+....+   |..+ .+++.   +.+.+.  
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~--   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAH--   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhh--
Confidence            4678999998 9999999999999999 899999988765443    233443222   3322 12222   222222  


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        82 g~id~lv~nAg~   93 (252)
T 3h7a_A           82 APLEVTIFNVGA   93 (252)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCceEEEECCCc
Confidence            689999999883

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.38  E-value=0.033  Score=49.70  Aligned_cols=40  Identities=23%  Similarity=0.206  Sum_probs=33.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR  234 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~  234 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++ +++++.+.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~   49 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   49 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHH
Confidence            4678999988 9999999999999999 899988 88776543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.38  E-value=0.01  Score=51.76  Aligned_cols=78  Identities=18%  Similarity=0.252  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH-HHHhcCCceE---eCCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~-~~~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++ ++.+ .+++.+....   .|..+ .+++.+.+.+..  .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999999999 899888876 5543 3445554322   23332 122222222221  2479


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |+++.+.|
T Consensus        84 d~lv~nAg   91 (249)
T 2ew8_A           84 DILVNNAG   91 (249)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.38  E-value=0.014  Score=51.62  Aligned_cols=79  Identities=20%  Similarity=0.291  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHH---HhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVL---VDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~---~~~~~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+....   .|..+ ++++.+.+   .+...
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899999988765433    22343322   23322 12222222   22222


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++++.|.
T Consensus        98 g~id~lv~nAg~  109 (273)
T 1ae1_A           98 GKLNILVNNAGV  109 (273)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            689999999873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.37  E-value=0.01  Score=52.01  Aligned_cols=79  Identities=25%  Similarity=0.248  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899999988776544 34443222   23332 122333333221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.37  E-value=0.0038  Score=56.76  Aligned_cols=103  Identities=19%  Similarity=0.192  Sum_probs=69.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~-i~~~~~~~~~~~~~~~  259 (345)
                      +.....++++++||-+|+|. |.++..+++..+. .+|++++.+++..+.+++    .|...+ +...+    ..+..  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d----~~~~~--  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD----GYYGV--  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----GGGCC--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC----hhhcc--
Confidence            44666788999999999976 8888888887542 369999999988877754    354322 11111    11100  


Q ss_pred             hcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ...+.+|+|+....-......+.+.|+|+ |++++.-
T Consensus       140 ~~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          140 PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             ccCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            11247999998765444347788899997 9988763

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.37  E-value=0.0019  Score=56.18  Aligned_cols=98  Identities=17%  Similarity=0.187  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC----ceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ..+|.+||-+|+| .|..+..+++..+. ++++++.+++-.+.+++...    ...+..    .++.+....+..+.||.
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~FD~  131 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK----GLWEDVAPTLPDGHFDG  131 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE----SCHHHHGGGSCTTCEEE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe----ehHHhhcccccccCCce
Confidence            4688999999997 47788888877666 89999999998888875432    212211    22333344445558987


Q ss_pred             E-EEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          268 S-FECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v-~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      | +|+...          ...+..+.+.|+|| |+++.+.
T Consensus       132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            7 465432          13467788999998 9998874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.36  E-value=0.011  Score=51.69  Aligned_cols=77  Identities=25%  Similarity=0.292  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe--CCCCCCccHHHHHHhhc--CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i--~~~~~~~~~~~~~~~~~--~gg~d~v  268 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+..+++.. ..+  |..+ .+++.+.+.+..  .+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED-ERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999999999 89998888776444444432 222  3332 122223332221  2479999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus        82 v~~Ag   86 (256)
T 2d1y_A           82 VNNAA   86 (256)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.36  E-value=0.0099  Score=52.07  Aligned_cols=78  Identities=19%  Similarity=0.292  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....+   |..+ .+++.+.+.+..  .+++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK-EADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHhcCCCC
Confidence            4678999998 9999999999999999 899999998876655 345443222   2222 122222232221  13799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        86 ~li~~Ag   92 (261)
T 3n74_A           86 ILVNNAG   92 (261)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.35  E-value=0.018  Score=49.84  Aligned_cols=38  Identities=24%  Similarity=0.313  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~   43 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENE   43 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhh
Confidence            45678999998 9999999999988999 89998887654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.35  E-value=0.017  Score=51.24  Aligned_cols=102  Identities=12%  Similarity=0.159  Sum_probs=69.8

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+....  .++    .++.
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~----~~~~  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGW----EQFD  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCG----GGCC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE--CCh----hhCC
Confidence            44566788999999999975 8888889988898 999999999888777642    3211111111  111    1222


Q ss_pred             CCCccEEEEc-----cCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       +.+|+|+..     .+.   ...+..+.+.|+|+ |++++...
T Consensus       128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence             579999864     221   34578888999998 99987653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.35  E-value=0.016  Score=50.50  Aligned_cols=78  Identities=21%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+....   .|..+ .+++.+.+.+..  .+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 8999999887655432    2343322   23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.35  E-value=0.025  Score=49.24  Aligned_cols=73  Identities=23%  Similarity=0.160  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.+.++||+|+ |++|...++.+...|+ +|++++++++.   +++++....+  -+..++..+.+....  ++|+++.+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~--~D~~~~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV--CDLRKDLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE--CCTTTCHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE--eeHHHHHHHHHHHhc--CCCEEEEC
Confidence            45789999998 9999999999999999 89999888744   3344422222  221234444443332  79999999


Q ss_pred             cC
Q 019139          272 IG  273 (345)
Q Consensus       272 ~g  273 (345)
                      .|
T Consensus        89 Ag   90 (249)
T 1o5i_A           89 AG   90 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.34  E-value=0.016  Score=51.22  Aligned_cols=79  Identities=20%  Similarity=0.360  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H----hcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K----NFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +    ..+....   .|..+ .+++.+.+.+..  .
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 899999987765433 2    2244322   23332 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.33  E-value=0.03  Score=52.92  Aligned_cols=98  Identities=14%  Similarity=0.222  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+++|+|+|.|.+|...++.++..|. +|++++.++++.+.+++.|...++-...   + .+.+....-..+|+++-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat---~-~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDAT---R-MDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTT---C-HHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCC---C-HHHHHhcCCCccCEEEECCC
Confidence            45679999999999999999999999 8999999999999999888754432211   1 23344432338999999999


Q ss_pred             CHHHHH---HHHHHhccCCeEEEEecc
Q 019139          274 NVSVMR---AALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~~~~---~~~~~l~~~~G~~v~~G~  297 (345)
                      +.....   ...+.+.+. .+++....
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiara~  103 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIARAR  103 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEEES
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEEEC
Confidence            865333   333445565 56666543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.33  E-value=0.033  Score=49.57  Aligned_cols=79  Identities=14%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHH-H----hcCCceE---eCCCCC---CccHHHHHHhh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-K----NFGVTEF---VNPKDH---DKPIQQVLVDL  260 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~-~----~~g~~~~---i~~~~~---~~~~~~~~~~~  260 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++ ++.+.+ +    ..+....   .|..+.   .+++.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3678999998 9999999999888999 898888886 554332 2    2343322   222220   12222222222


Q ss_pred             c--CCCccEEEEccC
Q 019139          261 T--DGGVDYSFECIG  273 (345)
Q Consensus       261 ~--~gg~d~v~d~~g  273 (345)
                      .  .+++|++|.+.|
T Consensus       101 ~~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            1  247999999987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.32  E-value=0.04  Score=49.10  Aligned_cols=87  Identities=20%  Similarity=0.249  Sum_probs=59.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+|.|+|+|.+|...++.+...|+ +|++.++++++.+.+.+.|+...       .+..+.+.     ..|+||-++..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVVE-----SCPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEEcCCH
Confidence            478999999999999999999998 89999999998888877765321       12233332     357777777754


Q ss_pred             HHHHHHH-------HHhccCCeEEEEec
Q 019139          276 SVMRAAL-------ECCHKGWGTSVIVG  296 (345)
Q Consensus       276 ~~~~~~~-------~~l~~~~G~~v~~G  296 (345)
                      ..+...+       ..++++ ..++.++
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            3344444       345554 4555443

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.32  E-value=0.018  Score=50.46  Aligned_cols=35  Identities=31%  Similarity=0.468  Sum_probs=32.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            46899999999999999999999988999998876

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.32  E-value=0.0079  Score=52.76  Aligned_cols=78  Identities=21%  Similarity=0.283  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .+....   .|..+ .++..+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 89999999887665532    232222   23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.31  E-value=0.012  Score=51.90  Aligned_cols=78  Identities=21%  Similarity=0.308  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc-----CCceE---eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTEF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~-----g~~~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +....   .|..+ .+++.+.+.+..  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            4678999998 9999999999989999 8999999887655432 21     33222   23332 122323332221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus        90 ~g~id~lv~nAg  101 (267)
T 1iy8_A           90 FGRIDGFFNNAG  101 (267)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            147999999987

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.014  Score=51.92  Aligned_cols=79  Identities=22%  Similarity=0.233  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc---CCceEeCCCCC--CccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTEFVNPKDH--DKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~---g~~~~i~~~~~--~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++   +....+..-+.  .++..+.+.+..  .++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999999999 8999999887765443 22   33332222221  122222222221  147


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.25  E-value=0.029  Score=49.26  Aligned_cols=78  Identities=18%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++ +.++.+.+    ++.+....   .|..+ .+++.+.+.+..  .
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 8888887 66554332    33354322   23322 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.25  E-value=0.011  Score=52.63  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++....+   |..+ .++..+.+.+..  .+++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS-LQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCCCC
Confidence            4678999998 9999999999999999 8999999988766553 44443322   3322 122222222221  24799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999873

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.25  E-value=0.02  Score=49.84  Aligned_cols=75  Identities=25%  Similarity=0.279  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|++++++.+.    ++.+...+ .|..+ .+++.+.+.+..  .+++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD-AAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC-HHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999998 9999999999999999 89988887652    22332211 23332 122323332221  24799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.24  E-value=0.019  Score=50.97  Aligned_cols=78  Identities=19%  Similarity=0.267  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+    ++.+....   .|..+ .+++.+.+.+..  .+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999999999 899999988765433    22344322   23332 122222222221  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        99 ~iD~lv~~Ag  108 (277)
T 2rhc_B           99 PVDVLVNNAG  108 (277)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.24  E-value=0.013  Score=51.93  Aligned_cols=78  Identities=19%  Similarity=0.283  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE--eCCCCCCccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~--i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.....  .|..+ .+++.+.+.+..  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999999999 8999999887765543 3322122  23322 122222222221  147999


Q ss_pred             EEEccC
Q 019139          268 SFECIG  273 (345)
Q Consensus       268 v~d~~g  273 (345)
                      ++.+.|
T Consensus        86 lv~nAg   91 (270)
T 1yde_A           86 VVNNAG   91 (270)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.23  E-value=0.014  Score=50.77  Aligned_cols=76  Identities=20%  Similarity=0.292  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.++.-...  .|..+  .+..+.+.+. -+++|+++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~-~~~id~lv~   80 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK--KKQIDQFANE-VERLDVLFN   80 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC--HHHHHHHHHH-CSCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC--HHHHHHHHHH-hCCCCEEEE
Confidence            3678999998 9999999999999999 89999998876554433321111  23322  2212222222 247999999


Q ss_pred             ccC
Q 019139          271 CIG  273 (345)
Q Consensus       271 ~~g  273 (345)
                      +.|
T Consensus        81 ~Ag   83 (246)
T 2ag5_A           81 VAG   83 (246)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.23  E-value=0.0047  Score=53.42  Aligned_cols=96  Identities=10%  Similarity=0.092  Sum_probs=61.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+|||+|+ |.+|...++.+...| + +|+++++++++.+.+...++..+ .|..+     .+.+.+... ++|++|.+.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN-----HAALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC-----HHHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC-----HHHHHHHhc-CCCEEEEcC
Confidence            57999998 999999999999999 7 89999898776432222122211 12222     223333322 689999988


Q ss_pred             CCHH---HHHHHHHHhccC-CeEEEEeccC
Q 019139          273 GNVS---VMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       273 g~~~---~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      +...   ..+.+++.++.. .++||.+++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            8643   234455555432 2689988764

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.23  E-value=0.019  Score=52.15  Aligned_cols=91  Identities=19%  Similarity=0.212  Sum_probs=62.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHH--cCCCeEEEEcCChhH--HHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEE
Q 019139          196 SIVAVFGLGTVGLAVAEGAKA--AGASRVIGIDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE  270 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~--~G~~~vi~~~~~~~~--~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d  270 (345)
                      -+|.|+|+|.+|...+..+..  -+.+.+.+++++.++  .+.++++|.....      .+ .+.+.+.+.+ ++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~-~e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AG-VEGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SH-HHHHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CC-HHHHHhccCCCCCcEEEE
Confidence            478999999999988887744  456445556666555  5667788864211      12 2334333333 7999999


Q ss_pred             ccCCHHHHHHHHHHhcc--CCeEEEE
Q 019139          271 CIGNVSVMRAALECCHK--GWGTSVI  294 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~--~~G~~v~  294 (345)
                      +++.....+.+..+++.  | .++++
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99976667778888887  7 77776

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.23  E-value=0.01  Score=52.67  Aligned_cols=78  Identities=21%  Similarity=0.246  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--ceEe---CCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEFV---NPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~~~i---~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++..  ...+   |..+ .+++.+.+.+..  .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSS-EAGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS-HHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999999999 899999988765543 22211  2221   2222 122222222221  247


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++.+.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.23  E-value=0.012  Score=51.22  Aligned_cols=79  Identities=25%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+....   .|..+ .+++.+.+.+..  .+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 9999999999999999 8999999887765442    2343222   22222 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.22  E-value=0.035  Score=47.88  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++ .+++++.+.+    +..+....   .|..+ .+.+.+.+.+..  .
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhc
Confidence            3678999998 9999999999999999 88887 5555443322    23343322   23322 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|++|.+.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.22  E-value=0.014  Score=50.53  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC--ceEe--CCCCC-CccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEFV--NPKDH-DKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~--~~~i--~~~~~-~~~~~~~~~~~~--  261 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.+.  ..++  +.+.. .+++.+.+.+..  
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4689999998 9999999999999999 8999999987765442    3332  1122  22111 122222222221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.+.|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1479999999873

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.20  E-value=0.024  Score=47.69  Aligned_cols=98  Identities=17%  Similarity=0.121  Sum_probs=68.0

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEE
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      ....++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++.+...+ +...+. .++      ...+.+|+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~-~~~------~~~~~~D~v  111 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL-FDW------TPDRQWDAV  111 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT-TSC------CCSSCEEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc-ccC------CCCCceeEE
Confidence            3467888999999864 7777777777 77 99999999999999887653222 111110 111      233489999


Q ss_pred             EEccC-----C---HHHHHHHHHHhccCCeEEEEeccC
Q 019139          269 FECIG-----N---VSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       269 ~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +....     .   ...+..+.+.|+++ |++++....
T Consensus       112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          112 FFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            86432     2   34578888899998 999888653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.19  E-value=0.014  Score=51.47  Aligned_cols=80  Identities=15%  Similarity=0.242  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      -.+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    +.+....+   |..+ .++..+.+.+..  .
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            35789999998 9999999999999999 8999999887655442    33433222   3332 122222222221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            479999998864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.19  E-value=0.011  Score=52.00  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCC-ceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV-TEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~-~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+. ...   .|..+ .+++.+.+.+..  .
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            4688999988 9999999999999999 899999988775543    22331 211   23322 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        87 g~id~lvnnAg   97 (262)
T 3pk0_A           87 GGIDVVCANAG   97 (262)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999988

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.18  E-value=0.0087  Score=51.71  Aligned_cols=103  Identities=24%  Similarity=0.237  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC---
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD---  262 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~---  262 (345)
                      +..++.+||-+|+| .|..++.+++.++ ..++++++.+++..+.+++    .|....+....  .+..+.+..+..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL--GPALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcCC
Confidence            34567899999987 6888999998873 2389999999988777754    35432122111  233344444432   


Q ss_pred             -CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          263 -GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 -gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       +.+|+||-....   ...+..+.+.|+++ |.+++-..
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence             579998844332   24478888999997 99987544

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.18  E-value=0.014  Score=51.70  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4689999998 9999999999999999 899999988765544 44444322   23332 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.17  E-value=0.027  Score=51.01  Aligned_cols=88  Identities=22%  Similarity=0.300  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++ +.+.+.|++..        ++.+.+.     ..|+|+-++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHHh-----hCCEEEEecC
Confidence            57899999999999999999999999 89999988776 45666776321        1222222     3677776655


Q ss_pred             CHH----HH-HHHHHHhccCCeEEEEecc
Q 019139          274 NVS----VM-RAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~----~~-~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...    .+ ...+..++++ +.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            311    11 3455667775 66666654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.014  Score=51.96  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h---cCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~---~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +   .+....   .|..+ +++..+.+.+..  .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD-ELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999999999 8999999887765443 2   233322   23322 122222333221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998883

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.16  E-value=0.012  Score=52.29  Aligned_cols=79  Identities=24%  Similarity=0.354  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCC---ceE---eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV---TEF---VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~---~~~---i~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+.   ...   .|..+ .++..+.+.+.. 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHH
Confidence            4689999998 9999999999999999 899999988765433    33333   111   23332 122222332221 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .+++|+++.+.|.
T Consensus        88 ~~g~id~lv~nAg~  101 (281)
T 3svt_A           88 WHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             1479999999884

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.16  E-value=0.016  Score=55.76  Aligned_cols=91  Identities=23%  Similarity=0.268  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|...        .++.+.+     ...|+++-++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~l~ell-----~~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VTMEYAA-----DKADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CCHHHHT-----TTCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CCHHHHH-----hcCCEEEECC
Confidence            468999999999999999999999999 9999999887654445556531        1222222     2589999988


Q ss_pred             CCHHHH-HHHHHHhccCCeEEEEeccC
Q 019139          273 GNVSVM-RAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       273 g~~~~~-~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +....+ ...+..++++ ..++.+|..
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg  366 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHF  366 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCC
Confidence            755444 5677899997 999989863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.16  E-value=0.016  Score=50.10  Aligned_cols=78  Identities=23%  Similarity=0.368  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-----~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+     .+....   .|..+ .+++.+.+.+..  .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence            4678999998 9999999999889999 89999998876554321     243322   23322 122222222221  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|++|.+.|
T Consensus        84 ~~~d~vi~~Ag   94 (248)
T 2pnf_A           84 DGIDILVNNAG   94 (248)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.15  E-value=0.048  Score=49.23  Aligned_cols=74  Identities=18%  Similarity=0.249  Sum_probs=52.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|+...       .+..+.+.     ..|+||-++..+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~~-----~aDvvi~~vp~~   88 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVIK-----KCKYTIAMLSDP   88 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHHH-----hCCEEEEEcCCH
Confidence            579999999999999999999999 99999999999888877775321       12222222     256666666654


Q ss_pred             HHHHHHH
Q 019139          276 SVMRAAL  282 (345)
Q Consensus       276 ~~~~~~~  282 (345)
                      ..+...+
T Consensus        89 ~~~~~v~   95 (310)
T 3doj_A           89 CAALSVV   95 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3344443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.15  E-value=0.014  Score=51.91  Aligned_cols=80  Identities=21%  Similarity=0.236  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      ..+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+....+   |..+ .++..+.+.+..  .
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            45789999998 9999999999889999 899999988765543    233443322   3322 122222232221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999884

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.14  E-value=0.015  Score=50.37  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+....   .|..+ .+++.+.+.+..  .+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999889999 899999988765544    23344322   23322 122333333322  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.14  E-value=0.011  Score=51.68  Aligned_cols=78  Identities=29%  Similarity=0.379  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCc---eEeCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT---EFVNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~---~~i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++..   ...|..+ .++..+.+.+..  .+++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4688999988 9999999999999999 8999999887766543 33322   1223333 122222232221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        86 ~lv~nAg   92 (248)
T 3op4_A           86 ILVNNAG   92 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.14  E-value=0.016  Score=51.28  Aligned_cols=79  Identities=19%  Similarity=0.246  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+    ++.+....   .|..+ .+.+.+.+.+..  .+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHHCC
Confidence            4678999998 9999999999999999 899999988765543    23343322   23322 122222232221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.13  E-value=0.014  Score=48.02  Aligned_cols=99  Identities=16%  Similarity=0.218  Sum_probs=65.9

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCccHHHHHHhhcC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~--~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ...++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .+.+.  ++. .+    . ..+.....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~----~-~~l~~~~~   87 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG----H-ENLDHYVR   87 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC----G-GGGGGTCC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc----H-HHHHhhcc
Confidence            44578899999999874 8888888887 66 99999999988777753    34322  222 11    1 11222334


Q ss_pred             CCccEEEEccCC-----------H----HHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIGN-----------V----SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g~-----------~----~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +.+|+|+-..+.           .    ..+..+.+.|+|+ |+++++-.
T Consensus        88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            479988865321           1    2357778899998 99988754

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.13  E-value=0.061  Score=48.31  Aligned_cols=46  Identities=26%  Similarity=0.440  Sum_probs=41.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      .+|.|+|+|.+|...+..+...|+ +|++.++++++.+.+.+.|...
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~   53 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACG   53 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSE
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCcc
Confidence            579999999999999998889999 9999999999998888888754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.12  E-value=0.024  Score=49.41  Aligned_cols=78  Identities=27%  Similarity=0.397  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN-TESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899999987764432    23343322   23322 122222232221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.12  E-value=0.0099  Score=52.82  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCC---ce-E--eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV---TE-F--VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~---~~-~--i~~~~~~~~~~~~~~~~~-  261 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+.   .. .  .|..+ .+++.+.+.+.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHH
Confidence            4678999998 9999999999999999 8999999887655432    2232   21 1  23332 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.+.|
T Consensus        83 ~~g~iD~lv~nAg   95 (280)
T 1xkq_A           83 QFGKIDVLVNNAG   95 (280)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             147999999987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.12  E-value=0.016  Score=50.83  Aligned_cols=78  Identities=17%  Similarity=0.187  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce-E--eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~-~--i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++.... .  .|..+ .+++.+.+.+..  .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999888999 899999988776544 3333211 1  23332 122222232221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.11  E-value=0.059  Score=48.11  Aligned_cols=86  Identities=16%  Similarity=0.243  Sum_probs=61.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|...   .    .+..+.+.     ..|+||.++..+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCHH
Confidence            69999999999998888888898 8999999998888777766431   1    12333332     4789999988655


Q ss_pred             HHHHHH-------HHhccCCeEEEEec
Q 019139          277 VMRAAL-------ECCHKGWGTSVIVG  296 (345)
Q Consensus       277 ~~~~~~-------~~l~~~~G~~v~~G  296 (345)
                      .+...+       ..++++ ..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            455444       456665 6666554

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.11  E-value=0.024  Score=50.66  Aligned_cols=97  Identities=19%  Similarity=0.125  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC----ceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~----~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      -.+.+++|+|+|++|.+++..+...|+++|+++.++.++.+.+ ++++.    ..+.....  +++.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~--~~l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA--RGIEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS--TTHHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH--HHHHHHHh-----cCCE
Confidence            4578999999999999999999999997899999998876543 33321    11111111  23333333     4899


Q ss_pred             EEEccCCHHH----HHHHHHHhccCCeEEEEecc
Q 019139          268 SFECIGNVSV----MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       268 v~d~~g~~~~----~~~~~~~l~~~~G~~v~~G~  297 (345)
                      |+++++....    .......++++ ..++.+-.
T Consensus       198 VInaTp~Gm~~~~~~pi~~~~l~~~-~~v~DlvY  230 (283)
T 3jyo_A          198 VVNATPMGMPAHPGTAFDVSCLTKD-HWVGDVVY  230 (283)
T ss_dssp             EEECSSTTSTTSCSCSSCGGGCCTT-CEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCHHHhCCC-CEEEEecC
Confidence            9998863210    01113456665 55555543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.09  E-value=0.019  Score=50.97  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHH----HHHhcCCceEe---CCCCCCccH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEFV---NPKDHDKPI  253 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~------------~~~~~----~~~~~g~~~~i---~~~~~~~~~  253 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++            .++.+    .+++.+....+   |..+ .++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v   86 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RAAL   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence            4689999998 9999999999999999 89998886            33322    22344543322   3332 1222


Q ss_pred             HHHHHhhc--CCCccEEEEccC
Q 019139          254 QQVLVDLT--DGGVDYSFECIG  273 (345)
Q Consensus       254 ~~~~~~~~--~gg~d~v~d~~g  273 (345)
                      .+.+.+..  .+++|+++.+.|
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCC
Confidence            22222221  147999999988

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.08  E-value=0.013  Score=51.44  Aligned_cols=79  Identities=20%  Similarity=0.257  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+....+   |..+ .++..+.+.+..  .+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQFG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 9999999998888999 899999988765543    233443322   3322 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.08  E-value=0.0076  Score=52.36  Aligned_cols=74  Identities=18%  Similarity=0.215  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHH-----Hhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL-----VDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~-----~~~~--~gg~  265 (345)
                      .+.++||+|+ |++|...++.+.. |+ .|+++++++++.+.+.+......+..     ++.+..     .+..  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHHhcCCC
Confidence            3678999998 9999987777655 87 89999999888777665332222211     111111     1111  1379


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999884

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.08  E-value=0.011  Score=50.86  Aligned_cols=103  Identities=17%  Similarity=0.195  Sum_probs=68.2

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceE-eCCCCCCccHHHHHHhhcCCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEF-VNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~--~~~-i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +...++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  +.+ +...+. .+.. ....+ .+.
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~-~~~~-~~~~~-~~~  143 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA-NKPQ-EYANI-VEK  143 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT-TCGG-GGTTT-SCC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC-CCcc-ccccc-Ccc
Confidence            445677899999999976 8888899998874499999999988877754311  111 111110 1100 00011 147


Q ss_pred             ccEEEEccCCH----HHHHHHHHHhccCCeEEEEe
Q 019139          265 VDYSFECIGNV----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       265 ~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|+|+.....+    ..+..+.+.|+++ |++++.
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            99999665554    3378888899998 999885

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.07  E-value=0.015  Score=51.52  Aligned_cols=80  Identities=28%  Similarity=0.332  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCC--CccHHHHHHhh--cCCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDH--DKPIQQVLVDL--TDGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~--~~~~~~~~~~~--~~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+....+..-+.  .+++.+.+.+.  ..++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4688999998 9999999999999999 899999888765543    23454433322221  12222222222  1247


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.07  E-value=0.019  Score=51.54  Aligned_cols=78  Identities=21%  Similarity=0.287  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHH----HHHhcCCceEe---CCCCCCccH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEFV---NPKDHDKPI  253 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~------------~~~~~----~~~~~g~~~~i---~~~~~~~~~  253 (345)
                      .+.++||+|+ +++|...++.+...|+ +|++++++            .++.+    .++..+....+   |..+ .++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence            4689999998 9999999999999999 89888776            33333    22344543322   3332 1222


Q ss_pred             HHHHHhhc--CCCccEEEEccC
Q 019139          254 QQVLVDLT--DGGVDYSFECIG  273 (345)
Q Consensus       254 ~~~~~~~~--~gg~d~v~d~~g  273 (345)
                      .+.+.+..  .+++|+++.+.|
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCC
Confidence            22232221  147999999887

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.06  E-value=0.018  Score=47.31  Aligned_cols=104  Identities=18%  Similarity=0.242  Sum_probs=68.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.......++++||-+|+|. |..+..+++.. . ++++++.+++..+.+++    .+...-+....  .++.+.+..  
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~--   97 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME--GDAPEALCK--   97 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE--SCHHHHHTT--
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe--cCHHHhccc--
Confidence            34555678899999999976 88888887766 4 99999999988877754    34311111111  223332221  


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+|+.....   ...+..+.+.|+++ |++++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~~  135 (192)
T 1l3i_A           98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (192)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            1379999965431   34577778889997 99887643

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.05  E-value=0.018  Score=50.41  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHH---hhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLV---DLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~---~~~~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+....   .|..+ .+.+.+.+.   +..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999999999999999 899999987765433    22343322   22222 112222222   2222


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            589999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.05  E-value=0.015  Score=50.94  Aligned_cols=78  Identities=26%  Similarity=0.367  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ ++++....   .|..+ .+++.+.+.+..  .+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCCCC
Confidence            4678999998 9999999999999999 899988887665433 44444322   23322 122222232221  14799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      ++|.+.|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.05  E-value=0.063  Score=48.73  Aligned_cols=88  Identities=17%  Similarity=0.237  Sum_probs=60.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ..+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|+...       .+..+.+     ...|+||-++..
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~-----~~aDvVi~~vp~   97 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAA-----RDADIVVSMLEN   97 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHH-----TTCSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHH-----hcCCEEEEECCC
Confidence            3589999999999999999999999 89999999999888877765322       1222222     146777777776


Q ss_pred             HHHHHHHH------HHhccCCeEEEEec
Q 019139          275 VSVMRAAL------ECCHKGWGTSVIVG  296 (345)
Q Consensus       275 ~~~~~~~~------~~l~~~~G~~v~~G  296 (345)
                      +..+...+      ..++++ ..++.++
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~s  124 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPG-SLFLDMA  124 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHHcchhHHhhCCCC-CEEEecC
Confidence            54344443      234554 5555554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.03  E-value=0.019  Score=50.53  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----h-cCCc-eE---eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----N-FGVT-EF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~-~g~~-~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    . .+.. ..   .|..+ .++..+.+.+..  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            4688999998 9999999999999999 8999999887655432    1 3332 21   23332 122222222221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.+.|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999883

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.03  E-value=0.024  Score=49.56  Aligned_cols=74  Identities=22%  Similarity=0.209  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhh--cCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDL--TDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~--~~gg~d~v~  269 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.     +.. ..|..+ .+++.+.+.+.  ..+++|+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d-~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD-TEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS-HHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999998 9999999999999999 89888887654321     111 123332 12222222222  124799999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+.|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.03  E-value=0.013  Score=51.21  Aligned_cols=79  Identities=22%  Similarity=0.329  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .++..+.+.+..  .+++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999999999999 899988887765433 33433222   23322 122222222221  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.01  E-value=0.022  Score=47.56  Aligned_cols=62  Identities=26%  Similarity=0.322  Sum_probs=42.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +++|+|+ |++|...++.+. .|+ +|++++++.+          ....|..+ .+.+.+.+..+  +++|+++.+.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HHHHHHHHHHh--CCCCEEEECCC
Confidence            7999998 999999998888 899 8998888754          12233333 12233333333  47899999887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.99  E-value=0.018  Score=51.58  Aligned_cols=81  Identities=17%  Similarity=0.124  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE----eCCCCCCccHHHHHHhhc--
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF----VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~----i~~~~~~~~~~~~~~~~~--  261 (345)
                      ..+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...+    .|..+........+..+.  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35688999998 9999999999889999 899999988765433    22232211    233331022222222221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.++|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1479999999984

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.99  E-value=0.011  Score=51.60  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc--CCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d  270 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.  +  ...|..+ .+++.+.+.+..  .+++|+++.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999998 9999999999999999 8999888765432211  1  2334433 122222222221  147999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.99  E-value=0.013  Score=52.54  Aligned_cols=79  Identities=19%  Similarity=0.219  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hh---cCCceE----eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTEF----VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~---~g~~~~----i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++   .+...+    .|..+ .++..+.+.+..  .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD-PGSCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 899999988765443 22   231111    23332 122222222221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.98  E-value=0.016  Score=50.81  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4678999998 9999999999999999 899999988765433    22343322   23322 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.97  E-value=0.037  Score=51.25  Aligned_cols=93  Identities=17%  Similarity=0.212  Sum_probs=64.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      -+|+|+|+|.+|..+++.+.. .. .|.+++++.++.+.+++......+|..+     .+.+.++.. +.|+|+++++..
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d-----~~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN-----FDKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC-----HHHHHHHHT-TCSEEEECCCGG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC-----HHHHHHHHh-CCCEEEEecCCc
Confidence            479999999999998887754 45 7888899999888877654333344433     223333332 689999999875


Q ss_pred             HHHHHHHHHhccCCeEEEEecc
Q 019139          276 SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       276 ~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .....+-.++..+ -.++.+..
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCC
T ss_pred             ccchHHHHHHhcC-cceEeeec
Confidence            4455555677776 78887764

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.97  E-value=0.019  Score=55.14  Aligned_cols=92  Identities=28%  Similarity=0.377  Sum_probs=68.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .-.|.+|+|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +       .++.+.+     ...|+++-+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~-------~~l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V-------VTLDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E-------CCHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e-------cCHHHHH-----hcCCEEEEC
Confidence            3578999999999999999999999999 999999988775445556653 1       1222222     258999988


Q ss_pred             cCCHHHH-HHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVM-RAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~-~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .+....+ ...+..++++ ..++.+|..
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg  346 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHF  346 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence            7765544 4677888997 888888863

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.97  E-value=0.017  Score=50.96  Aligned_cols=78  Identities=12%  Similarity=0.020  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHH-hc----CCceE---eCCCCCC----ccHHHHHHh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAK-NF----GVTEF---VNPKDHD----KPIQQVLVD  259 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~~-~~----g~~~~---i~~~~~~----~~~~~~~~~  259 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++ ++++.+.+. ++    +....   .|..+ .    +.+.+.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDC   87 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHHH
Confidence            4578999998 9999999999999999 8999888 776654332 22    43322   23333 2    222222222


Q ss_pred             hc--CCCccEEEEccC
Q 019139          260 LT--DGGVDYSFECIG  273 (345)
Q Consensus       260 ~~--~gg~d~v~d~~g  273 (345)
                      ..  .+++|+++.+.|
T Consensus        88 ~~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHhcCCCCEEEECCC
Confidence            21  147999999987

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.96  E-value=0.022  Score=49.88  Aligned_cols=78  Identities=15%  Similarity=0.200  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHHHHHHhh---cC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQQVLVDL---TD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~---~~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+....   .|..+ .+++.+.+.+.   ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            3678999998 9999999999999999 8999989887654332    2243222   23332 12233333332   14


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++++.|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            58999999984

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.96  E-value=0.012  Score=49.06  Aligned_cols=96  Identities=19%  Similarity=0.176  Sum_probs=59.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+|+|+|+ |.+|...++.+...|+ +|+++++++++.+.....+...+ .|..+     .+.+.+... ++|++|.+++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~-~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ-----AADVDKTVA-GQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS-----HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCC-----HHHHHHHHc-CCCEEEECcc
Confidence            58999998 9999999999999998 89999998775432111122111 12221     123333332 5899999988


Q ss_pred             CHH----------HHHHHHHHhcc-CCeEEEEeccC
Q 019139          274 NVS----------VMRAALECCHK-GWGTSVIVGVA  298 (345)
Q Consensus       274 ~~~----------~~~~~~~~l~~-~~G~~v~~G~~  298 (345)
                      ...          ....+++.++. +.++++.+++.
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            532          23444444432 22588888753

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.95  E-value=0.042  Score=49.86  Aligned_cols=47  Identities=26%  Similarity=0.420  Sum_probs=39.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++. .+++.|+.
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~  186 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAK  186 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCce
Confidence            357899999999999999999999999 899999887664 35566654

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.95  E-value=0.047  Score=47.31  Aligned_cols=101  Identities=16%  Similarity=0.243  Sum_probs=67.7

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCC-----ceEeCCCCCCccHHHHHHhhc
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGV-----TEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +...++||++||=+|+|+ |..+..+|+..|. .+|++++.+++..+.+++.-.     ..+......+..    . ...
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~----~-~~~  144 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK----Y-RHL  144 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG----G-TTT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc----c-ccc
Confidence            556789999999999963 8889999998773 389999999998877754321     112111111111    0 112


Q ss_pred             CCCccEEEEccCCH----HHHHHHHHHhccCCeEEEEe
Q 019139          262 DGGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       262 ~gg~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+.+|+||.....+    ..+..+.+.|+|+ |++++.
T Consensus       145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            23689888655543    3467777889998 998875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.94  E-value=0.012  Score=50.17  Aligned_cols=96  Identities=18%  Similarity=0.229  Sum_probs=60.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|+|+|+ |.+|...++.+...|+ +|++++++.++.+.+. .+. .++..+-  .+ .+.+.+... ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl--~d-~~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADV--SS-LDEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCT--TC-HHHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecC--CC-HHHHHHHhc-CCCEEEEeCcC
Confidence            57999998 9999999999999998 9999999877643211 111 1221111  11 223333332 69999999886


Q ss_pred             H-----------HHHHHHHHHhccC-CeEEEEeccC
Q 019139          275 V-----------SVMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       275 ~-----------~~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      .           .....+++.++.. ..+++.+++.
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            3           1234455555543 1489888764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.94  E-value=0.013  Score=54.05  Aligned_cols=79  Identities=20%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-----------HHHHHhcCCceE---eCCCCCCccHHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEF---VNPKDHDKPIQQVLV  258 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-----------~~~~~~~g~~~~---i~~~~~~~~~~~~~~  258 (345)
                      .+.++||+|+ +++|.+.+..+...|+ +|+.+++++++           .+.++..|....   .|..+ .+++.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHH
Confidence            5789999998 9999999999889999 89888887653           233344554332   23333 122222333


Q ss_pred             hhc--CCCccEEEEccCC
Q 019139          259 DLT--DGGVDYSFECIGN  274 (345)
Q Consensus       259 ~~~--~gg~d~v~d~~g~  274 (345)
                      +..  .+++|+++.+.|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            221  1479999999883

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.94  E-value=0.02  Score=51.15  Aligned_cols=78  Identities=13%  Similarity=0.189  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCceE---eCCCCCCccHHHHHHhh--cC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF---VNPKDHDKPIQQVLVDL--TD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~~---i~~~~~~~~~~~~~~~~--~~  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|++++++.++.+.+. ++    +....   .|..+ .+++.+.+...  ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 8999999887654332 21    43322   23322 12222222222  12


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +.+|+++.+.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47899999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.92  E-value=0.016  Score=51.26  Aligned_cols=78  Identities=29%  Similarity=0.362  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD-PKSVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence            4678999998 9999998888888899 899888876544332    22343322   23322 122222332221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            7999999877

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.92  E-value=0.019  Score=50.03  Aligned_cols=75  Identities=19%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhcC--CCccEEE
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF  269 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d~v~  269 (345)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ .+++.+.+.+...  +++|+++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHTSCTTTCCCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence            6889988 9999999999999999 899999988776544 34443221   23332 1233333333322  3799999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      ++.|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.90  E-value=0.038  Score=48.47  Aligned_cols=78  Identities=17%  Similarity=0.275  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHH-HhcCCceEe--CCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~---~~~~~~-~~~g~~~~i--~~~~~~~~~~~~~~~~~~--  262 (345)
                      .+.++||+|+   |++|...++.+...|+ +|+.+++++   +..+.+ ++.+....+  |..+ .+++.+.+.+...  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE-DASIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            4678999986   6999999999999999 898888876   223323 223332222  3332 1223333333322  


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        86 g~iD~lv~~Ag   96 (265)
T 1qsg_A           86 PKFDGFVHSIG   96 (265)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.90  E-value=0.0099  Score=50.97  Aligned_cols=96  Identities=16%  Similarity=0.211  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCC------CeEEEEcCChhHHHHHHhc----C-----CceE-eCCCCCCccHH
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA------SRVIGIDIDPKKFDRAKNF----G-----VTEF-VNPKDHDKPIQ  254 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~------~~vi~~~~~~~~~~~~~~~----g-----~~~~-i~~~~~~~~~~  254 (345)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ...+ +...+    ..
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d----~~  155 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD----GR  155 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC----GG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC----cc
Confidence            478899999999975 8888888887662      3899999999887776542    1     1111 11111    11


Q ss_pred             HHHHhhcC-CCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          255 QVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       255 ~~~~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +   .+.. +.+|+|+....-......+.+.|+++ |++++.
T Consensus       156 ~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          156 K---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             G---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             c---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence            1   1222 47999998766555568889999997 998764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.89  E-value=0.014  Score=51.71  Aligned_cols=79  Identities=28%  Similarity=0.330  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+ .+++....   .|..+ .+.+.+.+.+..  .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD-GERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC-HHHHHHHHHHHHHhCCCCC
Confidence            3578999998 9999999999999999 899999988775544 34443222   23322 122222222221  13799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999883

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.87  E-value=0.021  Score=50.63  Aligned_cols=94  Identities=15%  Similarity=0.040  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      ++.+++|+|+|++|.++++.+...|+ +|++++++.++.+ ++++++....++..+. .+    +.+   +.+|++++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~~-~~----~~~---~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM-DE----LEG---HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS-GG----GTT---CCCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEecH-HH----hcc---CCCCEEEECC
Confidence            57899999999999999999999997 9999999988754 4455543100111110 11    111   5799999999


Q ss_pred             CCHHHHH---HHHHHhccCCeEEEEecc
Q 019139          273 GNVSVMR---AALECCHKGWGTSVIVGV  297 (345)
Q Consensus       273 g~~~~~~---~~~~~l~~~~G~~v~~G~  297 (345)
                      +....-.   .....++++ ..++.+..
T Consensus       189 ~~~~~~~~~~i~~~~l~~~-~~v~D~~y  215 (271)
T 1nyt_A          189 SSGISGDIPAIPSSLIHPG-IYCYDMFY  215 (271)
T ss_dssp             SCGGGTCCCCCCGGGCCTT-CEEEESCC
T ss_pred             CCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            9654200   011235665 66777665

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.86  E-value=0.031  Score=49.44  Aligned_cols=102  Identities=14%  Similarity=0.139  Sum_probs=68.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHhc-----CCceE-eCCCCCCccHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNF-----GVTEF-VNPKDHDKPIQQVL  257 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~~-----g~~~~-i~~~~~~~~~~~~~  257 (345)
                      +.....++++++||-.|+| .|..+..+++..  +. +|++++.+++..+.+++.     |.+.+ +...+    +.+  
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d----~~~--  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD----IAD--  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC----TTT--
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc----hhc--
Confidence            3455678899999999987 577888888874  45 999999999988877643     43322 11111    111  


Q ss_pred             HhhcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEecc
Q 019139          258 VDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       258 ~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       .+..+.+|+|+-....+ ..+..+.+.|+++ |++++...
T Consensus       174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence             12224799999766554 4578888999997 99988754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.85  E-value=0.026  Score=50.15  Aligned_cols=34  Identities=29%  Similarity=0.356  Sum_probs=30.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999998 9999999999999999 89988776

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.85  E-value=0.0091  Score=51.93  Aligned_cols=101  Identities=20%  Similarity=0.258  Sum_probs=68.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc--eEeCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~--~~i~~~~~~~~~~~~~~~  259 (345)
                      +.....++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..  ..+...+. .++      
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~------   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA-AGY------   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC-TTC------
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh-HhC------
Confidence            44566788999999999975 8888899988888 89999999988777653    3432  11111110 111      


Q ss_pred             hcCCCccEEEEc-----c-CCHHHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFEC-----I-GNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d~-----~-g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ...+.+|+|+..     . .-...+..+.+.|+|+ |++++..
T Consensus        99 ~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence            013479999852     1 1234578888899997 9988764

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.85  E-value=0.024  Score=48.36  Aligned_cols=98  Identities=20%  Similarity=0.177  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCC-----ceE-eCCCCCCccHHHHHHh
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGV-----TEF-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~-----~~~-i~~~~~~~~~~~~~~~  259 (345)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.++...+.+++    .+.     +.+ +...+    ..+.  .
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d----~~~~--~  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD----GRMG--Y  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC----GGGC--C
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC----cccC--c
Confidence            378899999999975 8888888888763 289999999988877753    221     111 11111    1000  0


Q ss_pred             hcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ...+.+|+|+....-...+..+.+.|+++ |++++.-
T Consensus       147 ~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  182 (226)
T 1i1n_A          147 AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV  182 (226)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            11247999987766555578889999998 9988753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.85  E-value=0.017  Score=51.20  Aligned_cols=77  Identities=13%  Similarity=0.144  Sum_probs=50.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCC--c-eE--eCCCCCCccHHHHHHhhcC--CCcc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLTD--GGVD  266 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~--~-~~--i~~~~~~~~~~~~~~~~~~--gg~d  266 (345)
                      .++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++..  . ..  .|..+ .+++.+.+.+...  +++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence            68999998 9999999999999999 8999999887765443 3321  1 11  23332 1223333333222  3789


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.84  E-value=0.017  Score=50.90  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=49.3

Q ss_pred             CCCEEEEEc---CChHHHHHHHHHHHcCCCeEEEEcCChhH-HHH-HHhcCCce---EeCCCCCCccHHHHHH---hhcC
Q 019139          194 PGSIVAVFG---LGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR-AKNFGVTE---FVNPKDHDKPIQQVLV---DLTD  262 (345)
Q Consensus       194 ~g~~VlI~G---ag~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~-~~~~g~~~---~i~~~~~~~~~~~~~~---~~~~  262 (345)
                      .+.+++|+|   +|++|...++.+...|+ +|+.+++++++ .+. .++++...   ..|..+ ++++.+.+.   +..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            467899998   48999999999999999 89988887755 233 33444321   123332 122222222   2222


Q ss_pred             --CCccEEEEccC
Q 019139          263 --GGVDYSFECIG  273 (345)
Q Consensus       263 --gg~d~v~d~~g  273 (345)
                        +++|+++.+.|
T Consensus        84 ~~~~iD~lv~nAg   96 (269)
T 2h7i_A           84 AGNKLDGVVHSIG   96 (269)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCceEEEECCc
Confidence              17999999887

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.84  E-value=0.028  Score=49.74  Aligned_cols=78  Identities=22%  Similarity=0.171  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh---cCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~---~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++...+.+++   .+....   .|..+  .+-.+.+.+..  .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD--LEGAANVAEELAATRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC--HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHhcCC
Confidence            4689999998 9999999999999999 88888876554444433   333222   23322  11111222111  148


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++.+.|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.84  E-value=0.046  Score=46.77  Aligned_cols=74  Identities=12%  Similarity=0.078  Sum_probs=49.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE---eCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---VNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~---i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      ++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +++....   .|..+  .+..+.+.+.....+|+++.+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS--HQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC--HHHHHHHHHSCSSCCSEEEEC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC--HHHHHHHHHHHhhcCCEEEEe
Confidence            6899998 9999999999999999 7999999988776654 3432211   23322  222222223233345999999


Q ss_pred             cC
Q 019139          272 IG  273 (345)
Q Consensus       272 ~g  273 (345)
                      .|
T Consensus        80 Ag   81 (230)
T 3guy_A           80 AG   81 (230)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.84  E-value=0.02  Score=50.72  Aligned_cols=78  Identities=13%  Similarity=0.177  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-H----hcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K----NFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +    ..+....   .|..+ .++..+.+.+..  .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5689999998 9999999999999999 899999987764433 2    2243322   23332 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999988

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.83  E-value=0.013  Score=51.41  Aligned_cols=78  Identities=10%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcC---CCeEEEEcCChhHHHHHHhc---CCceE---eCCCCCCccHHHHHHh---h
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAG---ASRVIGIDIDPKKFDRAKNF---GVTEF---VNPKDHDKPIQQVLVD---L  260 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G---~~~vi~~~~~~~~~~~~~~~---g~~~~---i~~~~~~~~~~~~~~~---~  260 (345)
                      .+.++||+|+ |++|...++.+...|   + +|++++++.++.+.++++   +....   .|..+ .+.+.+.+.+   .
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   97 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGV   97 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHHHh
Confidence            4578999998 999999999988889   7 899998887654433322   32221   23332 2333333332   2


Q ss_pred             cCC-CccEEEEccC
Q 019139          261 TDG-GVDYSFECIG  273 (345)
Q Consensus       261 ~~g-g~d~v~d~~g  273 (345)
                      .+. ++|++|.++|
T Consensus        98 ~g~~~id~li~~Ag  111 (267)
T 1sny_A           98 TKDQGLNVLFNNAG  111 (267)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             cCCCCccEEEECCC
Confidence            222 6999999987

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.83  E-value=0.032  Score=49.90  Aligned_cols=78  Identities=14%  Similarity=0.228  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-h--------cCCceE---eCCCCCCccHHHHHHhh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N--------FGVTEF---VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~--------~g~~~~---i~~~~~~~~~~~~~~~~  260 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|++++++.++.+.+. +        .+....   .|..+ .+.+.+.+.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHH
Confidence            4678999998 9999999999999999 8999999877654332 1        232221   23322 12222222222


Q ss_pred             c--CCCccEEEEccC
Q 019139          261 T--DGGVDYSFECIG  273 (345)
Q Consensus       261 ~--~gg~d~v~d~~g  273 (345)
                      .  .+++|++|.++|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  147999999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.03  Score=49.74  Aligned_cols=79  Identities=19%  Similarity=0.267  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHH----hc-CCceEe---CCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAK----NF-GVTEFV---NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~~----~~-g~~~~i---~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++ +.++.+.+.    +. +....+   |..+ .+++.+.+.+..  
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK-PSEIADMMAMVADR  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            3578999998 9999999999999999 8998887 444433322    22 332222   2222 122222222221  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.+.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999884

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.83  E-value=0.024  Score=49.20  Aligned_cols=78  Identities=26%  Similarity=0.388  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce--E--eCCCCCCccHHHHHHhhc-CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE--F--VNPKDHDKPIQQVLVDLT-DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~--~--i~~~~~~~~~~~~~~~~~-~gg~d  266 (345)
                      .+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...  .  .|..+ .+.+.+.+.+.. .+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCCCc
Confidence            4678999998 9999999999999999 899999988765543 3344322  1  23332 122222222211 24799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++.+.|
T Consensus        88 ~li~~Ag   94 (254)
T 2wsb_A           88 ILVNSAG   94 (254)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.82  E-value=0.014  Score=52.04  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-----------HHHHHhcCCceEe---CCCCCCccHHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEFV---NPKDHDKPIQQVLV  258 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-----------~~~~~~~g~~~~i---~~~~~~~~~~~~~~  258 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++           .+.++..+....+   |..+ .++..+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHH
Confidence            4678999998 9999999999888999 89998887652           2223344543322   3332 122222222


Q ss_pred             hhc--CCCccEEEEccCC
Q 019139          259 DLT--DGGVDYSFECIGN  274 (345)
Q Consensus       259 ~~~--~gg~d~v~d~~g~  274 (345)
                      +..  .+++|+++.+.|.
T Consensus        86 ~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            221  1479999999883

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.82  E-value=0.021  Score=51.76  Aligned_cols=78  Identities=21%  Similarity=0.311  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHH----HHHhcCCceEe---CCCCCCccH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEFV---NPKDHDKPI  253 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~------------~~~~~----~~~~~g~~~~i---~~~~~~~~~  253 (345)
                      .+.++||+|+ |++|...++.+...|+ +|++++++            .++.+    .+++.+....+   |..+ .+++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v  122 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LASL  122 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHH
Confidence            5689999998 9999999999999999 88888765            33332    22344543332   3322 1222


Q ss_pred             HHHHHhhc--CCCccEEEEccC
Q 019139          254 QQVLVDLT--DGGVDYSFECIG  273 (345)
Q Consensus       254 ~~~~~~~~--~gg~d~v~d~~g  273 (345)
                      .+.+.+..  .+++|+++.+.|
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            22232221  147999999988

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.81  E-value=0.0098  Score=50.95  Aligned_cols=102  Identities=16%  Similarity=0.136  Sum_probs=68.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---ceEeCCCCCCccHHHHHHhhcC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +.+....+++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++...   ...+...+    ..+..  ...
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d----~~~~~--~~~  132 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD----GTLGY--EEE  132 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC----GGGCC--GGG
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC----ccccc--ccC
Confidence            44556778999999999975 88888888874 5 89999999998888865321   11111111    11100  112


Q ss_pred             CCccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +.+|+|+....-......+.+.|+++ |++++.-.
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            47999987655444456788999997 99887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.80  E-value=0.024  Score=49.14  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+    +..+....   .|..+ ++.+.+.+.+..  .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999888999 899999988765433    22343322   23322 122222222211  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        88 ~~d~vi~~Ag   97 (255)
T 1fmc_A           88 KVDILVNNAG   97 (255)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.79  E-value=0.0088  Score=52.18  Aligned_cols=94  Identities=26%  Similarity=0.327  Sum_probs=56.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .++||+|+ |++|...++.+...|+ +|+++++++++.+.      ....|..+ .+.+.+.+.++ .+++|+++.+.|.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~Dl~~-~~~v~~~~~~~-~~~id~lv~~Ag~   72 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTAEGR-KQAIADVLAKC-SKGMDGLVLCAGL   72 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHH-HHHHHHHHTTC-TTCCSEEEECCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccCCCC-HHHHHHHHHHh-CCCCCEEEECCCC
Confidence            36899998 9999999999999999 89998887654211      10011111 01111222222 2578999999874


Q ss_pred             HH------------------HHHHHHHHhcc-CCeEEEEeccC
Q 019139          275 VS------------------VMRAALECCHK-GWGTSVIVGVA  298 (345)
Q Consensus       275 ~~------------------~~~~~~~~l~~-~~G~~v~~G~~  298 (345)
                      ..                  ..+.++..+.. +.|+++.+++.
T Consensus        73 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           73 GPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             CTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            22                  13344444432 23899999864

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.78  E-value=0.023  Score=52.43  Aligned_cols=47  Identities=19%  Similarity=0.259  Sum_probs=40.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+.+++.|+.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~  209 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAK  209 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCe
Confidence            57899999999999999999999999 899999876666666666654

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.78  E-value=0.062  Score=49.87  Aligned_cols=111  Identities=14%  Similarity=0.139  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC----hhH---------HHHHHhcCCceEeCCCCCCccHHHHHHhh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID----PKK---------FDRAKNFGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~----~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      ++.+|+|.|+|..|..+++++..+|+++|+.++++    ++|         ..++++...      .....++.+.+.  
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~------~~~~~~L~eav~--  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP------ERLSGDLETALE--  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT------TCCCSCHHHHHT--
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc------cCchhhHHHHHc--
Confidence            56899999999999999999999999899999987    544         344444321      111134555553  


Q ss_pred             cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEe
Q 019139          261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGT  320 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  320 (345)
                         ++|++|-+++....-+..++.++++ ..++.+..+.    -++.+.+... +..|.++
T Consensus       263 ---~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          263 ---GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             ---TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEEE
T ss_pred             ---cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEEe
Confidence               4799999888433246677888886 7666666532    3778887777 7666665

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.77  E-value=0.021  Score=51.90  Aligned_cols=80  Identities=25%  Similarity=0.258  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC----------hhHHH----HHHhcCCceEeCCCCC--CccHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID----------PKKFD----RAKNFGVTEFVNPKDH--DKPIQQV  256 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~----------~~~~~----~~~~~g~~~~i~~~~~--~~~~~~~  256 (345)
                      .+.++||+|+ |++|...+..+...|+ +|++++++          .++.+    .++..+....+...+.  .++..+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5688999998 9999999999989999 89998876          33322    2334454333322221  1222222


Q ss_pred             HHhhc--CCCccEEEEccCC
Q 019139          257 LVDLT--DGGVDYSFECIGN  274 (345)
Q Consensus       257 ~~~~~--~gg~d~v~d~~g~  274 (345)
                      +.+..  .+++|+++.+.|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            22221  1479999999883

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.77  E-value=0.032  Score=49.81  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCC--eEEEEcCChhHHHHHHh-c-----CCceE---eCCCCCCccHHHHHHhhc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGAS--RVIGIDIDPKKFDRAKN-F-----GVTEF---VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~--~vi~~~~~~~~~~~~~~-~-----g~~~~---i~~~~~~~~~~~~~~~~~  261 (345)
                      .+.++||+|+ |++|...+..+...|+.  +|+.+++++++.+.+.+ +     +....   .|..+ .+++.+.+.+..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ-AEKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC-GGGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHH
Confidence            3678999998 99999988776666642  78888898877655432 1     33222   23333 234444444433


Q ss_pred             C--CCccEEEEccC
Q 019139          262 D--GGVDYSFECIG  273 (345)
Q Consensus       262 ~--gg~d~v~d~~g  273 (345)
                      .  +++|+++.+.|
T Consensus       111 ~~~g~iD~lVnnAG  124 (287)
T 3rku_A          111 QEFKDIDILVNNAG  124 (287)
T ss_dssp             GGGCSCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            2  37999999988

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.76  E-value=0.025  Score=50.96  Aligned_cols=94  Identities=12%  Similarity=0.002  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCc--eEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~--~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+ ++++++..  .++       ++ +.+.+.. ..+|++++
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SL-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CH-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eH-HHHHhhh-ccCCEEEE
Confidence            5789999999999999999999999878999999987754 44566542  121       11 1222222 26999999


Q ss_pred             ccCCHHHH-----HHHHHHhccCCeEEEEecc
Q 019139          271 CIGNVSVM-----RAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~~g~~~~~-----~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++.....     ......++++ ..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            98854310     0012346675 67777765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.76  E-value=0.034  Score=49.23  Aligned_cols=76  Identities=20%  Similarity=0.264  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhcC-CCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLTD-GGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~~-gg~d~  267 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ ++++....+   |..+ .+++.+.+.+... +++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCe
Confidence            4678999998 9999999999999999 899999998876654 445543222   3322 1233333333311 37899


Q ss_pred             EEEc
Q 019139          268 SFEC  271 (345)
Q Consensus       268 v~d~  271 (345)
                      ++.+
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.76  E-value=0.036  Score=51.14  Aligned_cols=88  Identities=19%  Similarity=0.189  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+.+.|+..+       .++.+.+.     ..|+|+-++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell~-----~aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALFE-----QSDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHHh-----hCCEEEEecc
Confidence            47799999999999999999999999 999998875 3455566776421       12333332     3677777665


Q ss_pred             CHH----H-HHHHHHHhccCCeEEEEec
Q 019139          274 NVS----V-MRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       274 ~~~----~-~~~~~~~l~~~~G~~v~~G  296 (345)
                      ...    . -...+..++++ ..++.++
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            211    1 13556677776 7777776

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.75  E-value=0.045  Score=48.58  Aligned_cols=92  Identities=11%  Similarity=0.024  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC--ceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~--~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.+++|+|+|+.|.+++..+...|+.+|+++.++.++.+.+ ++++.  ...+...+           +....+|++++
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----------l~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----------LEGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----------GTTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----------hcccCCCEEEE
Confidence            578999999999999999999999977899999998875544 45543  12222211           11147999999


Q ss_pred             ccCCHHHH---HHHHHHhccCCeEEEEecc
Q 019139          271 CIGNVSVM---RAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~~g~~~~~---~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++....-   ......++++ ..++.+-.
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~-~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEA-ALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTC-SEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcC-CEEEEeec
Confidence            98743200   0012456775 66666654

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.75  E-value=0.07  Score=48.00  Aligned_cols=102  Identities=15%  Similarity=0.196  Sum_probs=69.2

Q ss_pred             HhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc--eEeCCCCCCccHHHHHHh
Q 019139          187 WNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       187 ~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~--~~i~~~~~~~~~~~~~~~  259 (345)
                      .+... ++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..  ..+...+. .++     .
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~-----~  180 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM-LDT-----P  180 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-----C
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh-hcC-----C
Confidence            34444 78899999999874 8888888888787 89999999988877754    3432  11111110 010     1


Q ss_pred             hcCCCccEEEEc-----cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          260 LTDGGVDYSFEC-----IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       260 ~~~gg~d~v~d~-----~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +..+.+|+|+..     ..-...+..+.+.|+++ |++++...
T Consensus       181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            223489999863     22245688889999998 99988764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.73  E-value=0.11  Score=41.31  Aligned_cols=95  Identities=9%  Similarity=-0.005  Sum_probs=58.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHh---cCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~-~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ..+++|+|+|.+|...++.+...|. +|++++++ +++.+.+++   .|.. ++.-+-  .+ .+.+.+..-.++|+++-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~--~~-~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS--ND-SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT--TS-HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC--CC-HHHHHHcChhhCCEEEE
Confidence            4678999999999999999999998 89999986 455544432   2443 322211  11 23333332247999999


Q ss_pred             ccCCHHHH---HHHHHHhccCCeEEEEe
Q 019139          271 CIGNVSVM---RAALECCHKGWGTSVIV  295 (345)
Q Consensus       271 ~~g~~~~~---~~~~~~l~~~~G~~v~~  295 (345)
                      ++++...-   ....+.+.+. .+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            99876422   2223344453 566554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.73  E-value=0.047  Score=48.21  Aligned_cols=78  Identities=9%  Similarity=0.237  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+   |++|...++.+...|+ +|+.++++++   ..+.+ ++.+....  .|..+ .+.+.+.+.+..  .
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999985   6999999999888999 8998888764   33333 22342222  23332 122222222221  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        83 g~id~lv~nAg   93 (275)
T 2pd4_A           83 GSLDFIVHSVA   93 (275)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.73  E-value=0.034  Score=47.13  Aligned_cols=96  Identities=10%  Similarity=0.095  Sum_probs=61.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|+|+|+ |.+|...++.+...|+ +|++++++.++.+.+  .+. .++..+-  .+..+.+.+... ++|++|.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~--~d~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV--DWTPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT--TSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc--cCCHHHHHHHHc-CCCEEEECCcCC
Confidence            6899998 9999999999999998 999999988764322  121 2222211  121234444433 699999999853


Q ss_pred             H---------HHHHHHHHhccC-CeEEEEeccCC
Q 019139          276 S---------VMRAALECCHKG-WGTSVIVGVAA  299 (345)
Q Consensus       276 ~---------~~~~~~~~l~~~-~G~~v~~G~~~  299 (345)
                      .         ....+++.++.. .++++.+++..
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            1         133445554432 25899888743

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.72  E-value=0.024  Score=49.54  Aligned_cols=77  Identities=17%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHH-Hh---cCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRA-KN---FGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~-~~---~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      +.+++|+|+ |++|...++.+...|+ +|++++++.++  .+.+ ++   .+....   .|..+ .+++.+.+.+..  .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            568999998 9999999988888899 89998887765  3322 22   243322   23332 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        80 g~iD~lv~nAg   90 (258)
T 3a28_C           80 GGFDVLVNNAG   90 (258)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.72  E-value=0.018  Score=49.66  Aligned_cols=77  Identities=17%  Similarity=0.247  Sum_probs=51.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhHHHHHHhc-CCceE---eCCCCCCccHHHHHH---hhcCC-
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNF-GVTEF---VNPKDHDKPIQQVLV---DLTDG-  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G--~~~vi~~~~~~~~~~~~~~~-g~~~~---i~~~~~~~~~~~~~~---~~~~g-  263 (345)
                      +.+++|+|+ |++|...++.+...|  + +|++++++.++.+.++++ +....   .|..+ .+.+.+.+.   +..+. 
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCCC
Confidence            568999998 999999999988899  7 899999988877666655 22211   22222 122222222   22221 


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            6999999886

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.70  E-value=0.014  Score=50.60  Aligned_cols=75  Identities=15%  Similarity=0.054  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-c--CChhHHHHH-Hhc-CCceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-D--IDPKKFDRA-KNF-GVTEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~--~~~~~~~~~-~~~-g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+++ +  +++++.+.+ +++ +. .+.+..+ -..+.+.+.+.. +++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~-v~~~~~~~~~~~-g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK-PERLVDATLQHG-EAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC-GGGHHHHHGGGS-SCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH-HHHHHHHHHHHc-CCCCEE
Confidence            357899988 9999999999999999 89998 6  887766544 344 32 2333322 122333333322 479999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.70  E-value=0.061  Score=47.71  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HhcCCceE--eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+   |++|...++.+...|+ +|++++++++   ..+.+ .+.+....  .|..+ .+++.+.+.+..  .
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL-DEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4678999986   5999999999888999 8998888764   22222 22332222  23332 122222222221  2


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        98 g~iD~lv~~Ag  108 (285)
T 2p91_A           98 GSLDIIVHSIA  108 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.69  E-value=0.033  Score=49.99  Aligned_cols=36  Identities=31%  Similarity=0.416  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .+.+|+|+|+|++|..+++.+.+.|..+++.+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            357899999999999999999999998999998665

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.69  E-value=0.03  Score=49.79  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~--~~g  263 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+    ++.+....   .|..+ .+.+.+.+.+.  ..+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            3578999998 9999999998888899 888888877665433    22344322   23332 12222233222  124


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|++|.++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.67  E-value=0.025  Score=48.92  Aligned_cols=77  Identities=19%  Similarity=0.319  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++    +....   .|..+ .+++.+.+.+..  .+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD-EGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            468999998 9999999999989999 8999999887655432 22    22211   23322 122222222221  13


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.66  E-value=0.024  Score=50.04  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHH----HHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDR----AKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-~~~~~~----~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++ ++..+.    +++.+....+   |..+ ..+..+.+.+..  .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS-ESDFIEAIQTIVQSD  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhc
Confidence            4678999998 9999999999889999 88888874 443332    2344443322   2222 122223333221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.66  E-value=0.12  Score=46.97  Aligned_cols=75  Identities=19%  Similarity=0.201  Sum_probs=48.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHhc------CCceEeCCCCCCccHHHHHHhhcCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNF------GVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~~~~------g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.    +..+.++..      .--.++..+-  .+ .+.+.++.. 
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d-~~~~~~~~~-   99 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI--RD-LTTCEQVMK-   99 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT--TC-HHHHHHHTT-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC--CC-HHHHHHHhc-
Confidence            578999998 9999999999999998 899988854    333333332      1112222211  11 223333333 


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+||.+++.
T Consensus       100 ~~d~Vih~A~~  110 (351)
T 3ruf_A          100 GVDHVLHQAAL  110 (351)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999884

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.66  E-value=0.03  Score=49.56  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------H----HHHHhcCCceE---eCCCCCCccHHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F----DRAKNFGVTEF---VNPKDHDKPIQQVLV  258 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-------~----~~~~~~g~~~~---i~~~~~~~~~~~~~~  258 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++.++       .    +.++..+....   .|..+ .++..+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHH
Confidence            4688999998 9999999999999999 89998887642       1    12233344322   23332 122222222


Q ss_pred             hhc--CCCccEEEEccCC
Q 019139          259 DLT--DGGVDYSFECIGN  274 (345)
Q Consensus       259 ~~~--~gg~d~v~d~~g~  274 (345)
                      +..  .+++|+++.+.|.
T Consensus        83 ~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            221  1479999999883

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.66  E-value=0.069  Score=48.42  Aligned_cols=74  Identities=11%  Similarity=0.183  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-Hh----cCCc-eEeCCCCCCccHHHHHHhhcCCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFDRA-KN----FGVT-EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~---~~~~~~~-~~----~g~~-~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+.+++|+|+|++|.+++..+...|+++|+++.++   .++.+.+ ++    .+.. ..+...+ .+++.+.+.     .
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-~~~l~~~l~-----~  226 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-HEQLRKEIA-----E  226 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----T
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-HHHHHhhhc-----C
Confidence            57899999999999999999999999889999898   5554433 22    2221 2233322 011222221     5


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+|+++++
T Consensus       227 aDiIINaTp  235 (315)
T 3tnl_A          227 SVIFTNATG  235 (315)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEECcc
Confidence            899999876

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.65  E-value=0.019  Score=48.84  Aligned_cols=103  Identities=20%  Similarity=0.206  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC---
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD---  262 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~---  262 (345)
                      ...++.+||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .|...-+....  .+..+.+..+..   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL--SPAKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--CCHHHHHHHhhhccC
Confidence            345678999999864 888888888763 3499999999988777654    35432111111  233334333332   


Q ss_pred             -CCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          263 -GGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 -gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       +.+|+|+-....   ...+..+.+.|+++ |.+++-..
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence             579988844332   23478888999997 99987554

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.65  E-value=0.064  Score=47.48  Aligned_cols=87  Identities=13%  Similarity=0.103  Sum_probs=61.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +.+++|+|+|+.|.+++..+...|. +|+++.++.++.+.+.+++.. .....+    +       .  .+|+|+++++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~----l-------~--~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP----K-------S--AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC----S-------S--CCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH----h-------c--cCCEEEEcccC
Confidence            8899999999999999999999995 999999998876655477743 333322    1       1  68999998763


Q ss_pred             H-----H-HHHHHHHHhccCCeEEEEecc
Q 019139          275 V-----S-VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       275 ~-----~-~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .     . ....+...++++ ..++.+-.
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence            2     1 112223367776 77777754

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.64  E-value=0.022  Score=52.80  Aligned_cols=47  Identities=21%  Similarity=0.343  Sum_probs=39.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhHHHHHHhcCCc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~-vi~~~~~~~~~~~~~~~g~~  241 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ + |++.+++..+.+.+.++|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~  210 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGAR  210 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcE
Confidence            57899999999999999999999999 6 99998877555566666643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.64  E-value=0.059  Score=47.97  Aligned_cols=73  Identities=19%  Similarity=0.261  Sum_probs=50.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|+...       .+..+.+.     ..|+||-++..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVCA-----ACDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHH-----cCCEEEEEcCCHH
Confidence            58899999999998888888898 89999999998888777665321       12222222     2566666666653


Q ss_pred             HHHHHH
Q 019139          277 VMRAAL  282 (345)
Q Consensus       277 ~~~~~~  282 (345)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            344443

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.64  E-value=0.03  Score=49.85  Aligned_cols=96  Identities=19%  Similarity=0.142  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC-----C--------ceEeCCCCCCccHHHHHHh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-----V--------TEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g-----~--------~~~i~~~~~~~~~~~~~~~  259 (345)
                      .++.+||.+|+|. |..+..+++. +..+|++++.+++..+.+++.-     .        +.-+....  .+..+.+..
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~--~D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI--GDGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE--SCHHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE--CchHHHhcc
Confidence            4568999998863 6677777777 7669999999999888887532     1        00011111  233333433


Q ss_pred             hcCCCccEEEEccC----------CHHHHHHHHHHhccCCeEEEEe
Q 019139          260 LTDGGVDYSFECIG----------NVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       260 ~~~gg~d~v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                        .+.+|+|+-...          ....++.+.+.|+++ |.+++-
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence              458998884433          234578888999998 998875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.62  E-value=0.024  Score=51.69  Aligned_cols=77  Identities=19%  Similarity=0.293  Sum_probs=48.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-----PKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-----~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++||+|+ |++|...++.+...|+ +|+++.++     +++.+.+    +..+....   .|..+ ++++.+.+.+..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHH
Confidence            578999998 9999999999999999 88887654     3333332    23343322   23322 122333333221


Q ss_pred             --CCCccEEEEccC
Q 019139          262 --DGGVDYSFECIG  273 (345)
Q Consensus       262 --~gg~d~v~d~~g  273 (345)
                        .+++|+++++.|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              247999999988

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.61  E-value=0.017  Score=50.12  Aligned_cols=79  Identities=25%  Similarity=0.295  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.+++|+|+ |++|...+..+...|+ +|++++++ .++.+.+    +..+....   .|..+ .+++.+.+.+..  .
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            3578999998 9999999999889999 89988887 5544332    22243221   23322 122222232221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|++|.++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.58  E-value=0.066  Score=48.98  Aligned_cols=45  Identities=24%  Similarity=0.458  Sum_probs=38.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.+++.++ +.++++|.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~  193 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNA  193 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCc
Confidence            46799999999999999999999999 89999988776 55555554

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.58  E-value=0.049  Score=49.87  Aligned_cols=88  Identities=23%  Similarity=0.412  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++..+ +.+++.|++..        ++.+.+.     ..|+|+-++.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell~-----~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL--------PLEEIWP-----LCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC--------CHHHHGG-----GCSEEEECCC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC--------CHHHHHh-----cCCEEEEecC
Confidence            57899999999999999999999999 89999887665 35566675421        1221111     3566666655


Q ss_pred             CHH----HH-HHHHHHhccCCeEEEEecc
Q 019139          274 NVS----VM-RAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~----~~-~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...    .+ ...+..++++ +.++.++.
T Consensus       229 ~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            321    11 3455566665 66666654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.57  E-value=0.088  Score=46.22  Aligned_cols=79  Identities=19%  Similarity=0.168  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--  261 (345)
                      ..+.+++|+|+ |++|...++.+...|+ +|++++ ++.++.+..    +..+....   .|..+ .++..+.+.+..  
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            35678999998 9999999999989999 888877 444433322    22333222   23332 122222222221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus       101 ~g~id~li~nAg  112 (269)
T 3gk3_A          101 FGKVDVLINNAG  112 (269)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            137999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.54  E-value=0.04  Score=50.19  Aligned_cols=41  Identities=22%  Similarity=0.191  Sum_probs=34.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA  235 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~~~~  235 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4678999998 9999999999999999 899888 887765543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.53  E-value=0.031  Score=52.66  Aligned_cols=85  Identities=20%  Similarity=0.178  Sum_probs=53.7

Q ss_pred             hhcCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhH----------------HHHHHhcCCceEe---C
Q 019139          188 NTAKV-EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKK----------------FDRAKNFGVTEFV---N  245 (345)
Q Consensus       188 ~~~~~-~~g~~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~~----------------~~~~~~~g~~~~i---~  245 (345)
                      ...++ +.+.++||+|+ +++|++.+..+.. .|+ +|+.++++++.                .+.+++.|.....   |
T Consensus        53 ~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~D  131 (422)
T 3s8m_A           53 ARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGD  131 (422)
T ss_dssp             HTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             hccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEec
Confidence            34455 45788899998 8999998877777 999 88888765432                1445566654332   3


Q ss_pred             CCCCCccH---HHHHHhhcCCCccEEEEccCC
Q 019139          246 PKDHDKPI---QQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       246 ~~~~~~~~---~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ..+ ++..   .+.+.+..+|++|++++++|.
T Consensus       132 vtd-~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          132 AFS-DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TTS-HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCC-HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            322 1222   223333333689999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.51  E-value=0.028  Score=49.60  Aligned_cols=79  Identities=22%  Similarity=0.236  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+    ++.+....+   |..+ .++..+.+.+..  .
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 7877766 55444332    334443322   3322 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.51  E-value=0.022  Score=49.78  Aligned_cols=76  Identities=22%  Similarity=0.332  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe---CCCCCCccHHHHHHhhc-CCCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DGGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~-~gg~d~v  268 (345)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++.++  ..++++....+   |..+ .++..+.+.... .+++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD-EAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC-HHHHHHHHHHHHHHSCEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence            4678999998 9999999998889999 88888875543  34445543322   3322 122222221111 2489999


Q ss_pred             EEccC
Q 019139          269 FECIG  273 (345)
Q Consensus       269 ~d~~g  273 (345)
                      +.+.|
T Consensus        84 v~nAg   88 (257)
T 3tl3_A           84 VNCAG   88 (257)
T ss_dssp             EECGG
T ss_pred             EECCC
Confidence            99988

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.51  E-value=0.062  Score=46.81  Aligned_cols=101  Identities=17%  Similarity=0.295  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc---
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---  261 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~---  261 (345)
                      ...++.+||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|...-+....  .+..+.+..+.   
T Consensus        76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~  151 (247)
T 1sui_A           76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDE  151 (247)
T ss_dssp             HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSG
T ss_pred             HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHHHHHHhcc
Confidence            34567899999986 478888888886  45 89999999988777753    45432121111  22333333331   


Q ss_pred             --CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEec
Q 019139          262 --DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       262 --~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                        .+.||+||-....   ...+..+.+.|+++ |.++.-.
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence              3589988854322   34477888999998 9988654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.50  E-value=0.033  Score=52.17  Aligned_cols=47  Identities=19%  Similarity=0.147  Sum_probs=39.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++..+.+.++++|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~  236 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLT  236 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCce
Confidence            57899999999999999999999999 899998876555555556653

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.50  E-value=0.028  Score=49.28  Aligned_cols=78  Identities=19%  Similarity=0.371  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE----eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF----VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g-~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~----i~~~~~~~~~~~~~~~~~--  261 (345)
                      .+.++||+|+ | ++|...+..+...|+ +|+.++++.++.+.+.    +.+...+    .|..+ .+++.+.+.+..  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHHHH
Confidence            4689999998 7 799999999889999 8999999887655432    2222111    23322 122222222221  


Q ss_pred             CCCccEEEEccC
Q 019139          262 DGGVDYSFECIG  273 (345)
Q Consensus       262 ~gg~d~v~d~~g  273 (345)
                      .+++|+++.+.|
T Consensus        99 ~g~id~li~~Ag  110 (266)
T 3o38_A           99 AGRLDVLVNNAG  110 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCcEEEECCC
Confidence            147999999988

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.49  E-value=0.026  Score=49.67  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++     ...+.. ..|..+ .+++.+.+.+..  .+++|+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN-PDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999998 9999999999999999 89988887654     111111 123332 122222222221  14799999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      .+.|
T Consensus        80 ~~Ag   83 (264)
T 2dtx_A           80 NNAG   83 (264)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.47  E-value=0.047  Score=49.57  Aligned_cols=78  Identities=23%  Similarity=0.253  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhHHH----HHHhcCCceEeCCCCCCccHHHHHHh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~---------~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+++++         +.++.+    .++..+.....|..+. .+..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~-~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSV-EAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCG-GGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCH-HHHHHHHHH
Confidence            4678999998 9999999999999999 8888643         344332    2233454445565542 223233322


Q ss_pred             hc--CCCccEEEEccC
Q 019139          260 LT--DGGVDYSFECIG  273 (345)
Q Consensus       260 ~~--~gg~d~v~d~~g  273 (345)
                      ..  .+++|++|++.|
T Consensus        86 ~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHTSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            21  247999999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.47  E-value=0.016  Score=51.25  Aligned_cols=75  Identities=23%  Similarity=0.228  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc--CCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d  270 (345)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+....+    ..|..+ .....+.+.+..  .+++|+++.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~-~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE-AAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS-HHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence            4688999998 9999999999999999 899988876543211000    112222 111222222211  147999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9883

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.46  E-value=0.11  Score=46.80  Aligned_cols=87  Identities=17%  Similarity=0.245  Sum_probs=59.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   .    .+..+.+.     ..|+||.++..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHHh-----cCCEEEEeCCCH
Confidence            569999999999998888888898 7999999988877777766531   1    12222222     368888888865


Q ss_pred             HHHHHHHH-------HhccCCeEEEEec
Q 019139          276 SVMRAALE-------CCHKGWGTSVIVG  296 (345)
Q Consensus       276 ~~~~~~~~-------~l~~~~G~~v~~G  296 (345)
                      ..+...+.       .+.++ ..++.++
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            54555543       24454 5555454

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.46  E-value=0.068  Score=45.92  Aligned_cols=96  Identities=17%  Similarity=0.132  Sum_probs=65.8

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .++++.+||=+|+| .|.++..+++. |+ +|++++.+++..+.+++.  ..++.     .+..+.+..+..+.+|+|+.
T Consensus        38 ~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCG-RGEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCT-TTHHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCC-CCHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhhcCCCCeeEEEE
Confidence            35678999999986 35566666665 88 899999999998888775  22221     23333333444558999986


Q ss_pred             c-----cCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          271 C-----IGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~-----~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .     +..   ...+..+.+.|+++ |++++.-.
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            3     222   35578888999998 99887543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.45  E-value=0.083  Score=49.68  Aligned_cols=95  Identities=16%  Similarity=0.098  Sum_probs=60.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC--CeEEEEcCChhHHHHHH-hcC------Cce-EeCCCCCCccHHHHHHhhcCC-Cc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGA--SRVIGIDIDPKKFDRAK-NFG------VTE-FVNPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~--~~vi~~~~~~~~~~~~~-~~g------~~~-~i~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      +|+|+|+|.+|..+++.+...|.  ..|++++++.++.+.+. +++      ... .+|..+     .+.+.++..+ ++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-----~~~l~~~l~~~~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-----IEELVALINEVKP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-----HHHHHHHHHHHCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-----HHHHHHHHHhhCC
Confidence            68999999999999998888773  38888999988766543 332      211 122222     1223333323 68


Q ss_pred             cEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          266 DYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       266 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      |+|+++++.......+..+++.+ -.++.+..
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence            99999998654344555667775 66666543

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.45  E-value=0.049  Score=52.03  Aligned_cols=105  Identities=19%  Similarity=0.257  Sum_probs=71.7

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHc-CCC--eEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCcc
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAA-GAS--RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~--~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      -++.-..+|+|+|+|++|..++.++... +..  .|+.++..+.+.+..+..|.. +....-.+.+..+.+..+..++ |
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl~~~-D   85 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTLEEN-D   85 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGCCTT-C
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHhcCC-C
Confidence            3455567899999999999988777654 452  688888877666666666753 3222222245555565565555 9


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          267 YSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       267 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|++.+-....+..+-.+++.+ -.++....
T Consensus        86 vVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           86 FLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             EEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             EEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            9999876655567777788886 78888875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.45  E-value=0.025  Score=49.96  Aligned_cols=95  Identities=18%  Similarity=0.142  Sum_probs=60.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +|+|+|+ |.+|...++.+...  |+ +|++++++.++.+.+...+...+. |..+     .+.+.+... ++|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d-----~~~l~~~~~-~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ-----PESLQKAFA-GVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC-----HHHHHHHTT-TCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC-----HHHHHHHHh-cCCEEEEcC
Confidence            5899998 99999999888877  88 899998887765555444543222 2222     223333332 689999998


Q ss_pred             CCH-------HHHHHHHHHhccC-CeEEEEeccC
Q 019139          273 GNV-------SVMRAALECCHKG-WGTSVIVGVA  298 (345)
Q Consensus       273 g~~-------~~~~~~~~~l~~~-~G~~v~~G~~  298 (345)
                      +..       .....+++.++.. -++++.+++.
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            741       1233445555432 1488888763

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.44  E-value=0.049  Score=49.53  Aligned_cols=45  Identities=16%  Similarity=0.357  Sum_probs=37.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHhcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGV  240 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~~~~g~  240 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++ +.++ +.++++|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~  190 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQA  190 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCc
Confidence            57899999999999999999999999 8999988 6655 34455565

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.43  E-value=0.025  Score=49.51  Aligned_cols=77  Identities=12%  Similarity=0.178  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHH---cCCCeEEEEcCChhHHHHHH-hc-----CCceE---eCCCCCCccHHHHHHhhc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRAK-NF-----GVTEF---VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~---~G~~~vi~~~~~~~~~~~~~-~~-----g~~~~---i~~~~~~~~~~~~~~~~~  261 (345)
                      +.++||+|+ |++|...+..+..   .|+ +|+.+++++++.+.+. ++     +....   .|..+ ++++.+.+....
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHHH
Confidence            568899998 9999998887777   899 8999999887655432 22     33221   23332 123333333332


Q ss_pred             ----CCCcc--EEEEccC
Q 019139          262 ----DGGVD--YSFECIG  273 (345)
Q Consensus       262 ----~gg~d--~v~d~~g  273 (345)
                          .+++|  +++.+.|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence                24677  9999876

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.42  E-value=0.05  Score=47.00  Aligned_cols=103  Identities=17%  Similarity=0.223  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc----
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT----  261 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~----  261 (345)
                      ...++.+||-+|+| .|..++.+++.+. ..++++++.+++..+.+++    .|...-+....  .+..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhccC
Confidence            34567899999986 4777888888863 2399999999988777753    45532121111  22333333331    


Q ss_pred             -CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 -DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 -~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       .+.+|+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~~  182 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDNT  182 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECT
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence             3579988854332   24477888999997 99887543

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.41  E-value=0.062  Score=49.48  Aligned_cols=48  Identities=23%  Similarity=0.479  Sum_probs=39.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~-~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      -.|.+|.|+|.|.+|...++.++ ..|+ +|++.+++.++.+.++++|..
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~  209 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAE  209 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcE
Confidence            35789999999999999999999 9999 899999887665555555543

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.41  E-value=0.18  Score=45.35  Aligned_cols=89  Identities=19%  Similarity=0.125  Sum_probs=60.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ..+|.|+|.|.+|...++.+...|+ +|++.++++++.+.+.+.|+...       .+..+.+.     ..|+||-++..
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~~-----~aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAALS-----ASPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHHH-----HSSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEEeCC
Confidence            4579999999999999998889999 89999999999888877775321       12333332     36788888776


Q ss_pred             HHHHHHHHH-----HhccCCeEEEEecc
Q 019139          275 VSVMRAALE-----CCHKGWGTSVIVGV  297 (345)
Q Consensus       275 ~~~~~~~~~-----~l~~~~G~~v~~G~  297 (345)
                      +..+...+.     .+.++ ..++.++.
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCC
Confidence            543444332     23454 55555543

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.40  E-value=0.024  Score=48.23  Aligned_cols=102  Identities=17%  Similarity=0.167  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc---
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---  261 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~---  261 (345)
                      ...++.+||-+|+| .|..++.+++..  +. +|++++.+++..+.+++    .|....+....  .+..+.+..+.   
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT--GLALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcC
Confidence            44677899999987 488888888887  45 99999999988777653    45432111111  22333333332   


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+|+||-....   ...+..+.+.|+++ |.++.-..
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            1469998844322   34577888999998 98887654

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.40  E-value=0.031  Score=51.18  Aligned_cols=100  Identities=20%  Similarity=0.141  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC------Cc-eEeCCCCCCccHHHHHHhhcCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------VT-EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g------~~-~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ..++.+||.+|+| .|..+..+++..+..+|++++.+++..+.+++.-      .+ .-+....  .+..+.+.....+.
T Consensus       118 ~~~~~~VLdIG~G-~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIGGG-DGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI--GDGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEETCS-SSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE--SCHHHHHHTSCTTC
T ss_pred             CCCCCEEEEECCC-ccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE--CCHHHHHHhccCCC
Confidence            3566899999885 3667777777665459999999999888876531      10 0011111  23444444333458


Q ss_pred             ccEEEEccC----------CHHHHHHHHHHhccCCeEEEEe
Q 019139          265 VDYSFECIG----------NVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       265 ~d~v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|+|+-...          ....+..+.+.|+++ |.+++-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            998885332          235578888999998 999885

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.37  E-value=0.07  Score=45.82  Aligned_cols=72  Identities=17%  Similarity=0.097  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+.+|+|+|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..+...+ .|..+     .+.+.++.. ++|++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD-----ADSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS-----HHHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC-----HHHHHHHHc-CCCEEE
Confidence            3578999998 99999999998888  78 899999987765433 1122211 22222     223333332 589999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      .++|
T Consensus        75 ~~a~   78 (253)
T 1xq6_A           75 ILTS   78 (253)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9887

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.37  E-value=0.12  Score=44.27  Aligned_cols=115  Identities=16%  Similarity=0.112  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      .+.+|||+|+|.+|...+..+...|+ +|++++.... ..+.+.+.+--.++. ......      ++  .++|+||-++
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~------dL--~~adLVIaAT   99 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-KKVGEE------DL--LNVFFIVVAT   99 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGG------GS--SSCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHh------Hh--CCCCEEEECC
Confidence            46789999999999999999999999 7888765432 233333333222332 221111      11  2799999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc--ccEEEEeeec
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGTAFG  323 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~~~~  323 (345)
                      +.+. ++..+...+.. |..|..-..+...++-++  .++.  .++| ++..+
T Consensus       100 ~d~~-~N~~I~~~ak~-gi~VNvvD~p~~~~f~~P--aiv~rg~l~i-aIST~  147 (223)
T 3dfz_A          100 NDQA-VNKFVKQHIKN-DQLVNMASSFSDGNIQIP--AQFSRGRLSL-AISTD  147 (223)
T ss_dssp             CCTH-HHHHHHHHSCT-TCEEEC-----CCSEECC--EEEEETTEEE-EEECT
T ss_pred             CCHH-HHHHHHHHHhC-CCEEEEeCCcccCeEEEe--eEEEeCCEEE-EEECC
Confidence            9877 55555555555 777666543333344333  3333  5565 44433

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.35  E-value=0.066  Score=43.00  Aligned_cols=99  Identities=19%  Similarity=0.240  Sum_probs=62.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHh-hcCCCccEEE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD-LTDGGVDYSF  269 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~-~~~gg~d~v~  269 (345)
                      ++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    ....++..+-......+.+.. +..+.+|+|+
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~   93 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM   93 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence            67889999999976 8888888888642 3899999887 3221    111122211111111222333 2334899999


Q ss_pred             Ec-----cCC------------HHHHHHHHHHhccCCeEEEEecc
Q 019139          270 EC-----IGN------------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       270 d~-----~g~------------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..     .+.            ...+..+.+.|+++ |++++...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  137 (180)
T 1ej0_A           94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF  137 (180)
T ss_dssp             ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            73     333            25577888899997 99988655

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.35  E-value=0.018  Score=50.88  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=49.1

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccE
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~  267 (345)
                      ...+.+|||+|+ |++|...++.+...|+ +|+.+++++++..   . .... ..|..+ .++..+.+.+..  .+++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTN-EEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            456889999998 9999999999999999 8999888766431   1 1111 123333 122222232221  147999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++.+.|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.33  E-value=0.028  Score=52.05  Aligned_cols=48  Identities=25%  Similarity=0.383  Sum_probs=41.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhcCCc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVT  241 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~g~~  241 (345)
                      -.|.+|+|+|.|.+|..+++.+..+|+ +|++.+++.++.+ +++++|++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 8999999888766 45556754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.29  E-value=0.027  Score=49.66  Aligned_cols=95  Identities=18%  Similarity=0.243  Sum_probs=59.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +|+|+|+ |.+|...++.+...  |+ +|++++++.++.+.+...+...+ .|..+     .+.+.+... ++|+||.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD-----EAALTSALQ-GVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC-----HHHHHHHTT-TCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC-----HHHHHHHHh-CCCEEEEeC
Confidence            4899998 99999999888887  88 89998888776554444454322 12222     123333332 689999988


Q ss_pred             CCH-----HHHHHHHHHhcc-CCeEEEEeccC
Q 019139          273 GNV-----SVMRAALECCHK-GWGTSVIVGVA  298 (345)
Q Consensus       273 g~~-----~~~~~~~~~l~~-~~G~~v~~G~~  298 (345)
                      +..     .....+++.++. +-++++.+++.
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            742     123445555443 22588888763

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.24  E-value=0.078  Score=50.84  Aligned_cols=94  Identities=15%  Similarity=0.045  Sum_probs=59.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHh-cCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKN-FGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~-~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +.+|+|+|+|++|..++..+... |. +|++++++.++.+.+.+ .+... .++..+    . +.+.+.. .++|+|+++
T Consensus        23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d----~-~~l~~~l-~~~DvVIn~   95 (467)
T 2axq_A           23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD----D-SALDKVL-ADNDVVISL   95 (467)
T ss_dssp             CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC----H-HHHHHHH-HTSSEEEEC
T ss_pred             CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC----H-HHHHHHH-cCCCEEEEC
Confidence            46899999999999998888877 66 89999999887665543 23322 123322    1 1222222 169999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEec
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ++..........+++.+ -.++...
T Consensus        96 tp~~~~~~v~~a~l~~g-~~vvd~~  119 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTK-TDVVTSS  119 (467)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEEECS
T ss_pred             CchhhhHHHHHHHHhcC-CEEEEee
Confidence            88643233334456665 5666543

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.24  E-value=0.15  Score=45.00  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=58.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|... ...      +.    .+.  ...|+||-++...
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~------~~----~~~--~~~D~vi~av~~~   68 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ------DL----SLL--QTAKIIFLCTPIQ   68 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES------CG----GGG--TTCSEEEECSCHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC------CH----HHh--CCCCEEEEECCHH
Confidence            58899999999999998888998 8999999999888887777531 111      11    112  3678888888864


Q ss_pred             HHHHHHHHH----hccCCeEEEEec
Q 019139          276 SVMRAALEC----CHKGWGTSVIVG  296 (345)
Q Consensus       276 ~~~~~~~~~----l~~~~G~~v~~G  296 (345)
                      . ....+..    ++++ ..++.++
T Consensus        69 ~-~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           69 L-ILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             H-HHHHHHHHGGGSCTT-CEEEECC
T ss_pred             H-HHHHHHHHHhhCCCC-CEEEECC
Confidence            3 4444433    3454 5555553

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.21  E-value=0.11  Score=45.11  Aligned_cols=101  Identities=19%  Similarity=0.202  Sum_probs=66.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceE-eCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~-i~~~~~~~~~~~~~~~~  260 (345)
                      +......+++.+||-+|+| .|.++..+++.. . +|++++.+++..+.+++    .+...+ +...+. .++     .+
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l-----~~   99 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQM-----PF   99 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CS
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhC-----CC
Confidence            4455567789999999987 577777777654 4 89999999988777654    232211 111110 111     12


Q ss_pred             cCCCccEEEEccCC------HHHHHHHHHHhccCCeEEEEec
Q 019139          261 TDGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       261 ~~gg~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+.+|+|+....-      ...+..+.+.|+|+ |++++..
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            23479999976332      35578889999998 9998864

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.19  E-value=0.026  Score=48.32  Aligned_cols=97  Identities=19%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc-CCCccEEEE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DGGVDYSFE  270 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~-~gg~d~v~d  270 (345)
                      .+++.+||-+|+|. |..+..+++. |. +|++++.++...+.+++......+...+....+     .+. .+.+|+|+.
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-----~~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGKGEL-----PAGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSC-----CTTCCCCEEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchhhcc-----CCcCCCCEEEEEe
Confidence            36788999999863 6777777776 77 999999999988888765322111111100010     122 348999998


Q ss_pred             ccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          271 CIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...-...+..+.+.|+|+ |+++..+.
T Consensus       118 ~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             CCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            766556688999999998 99995554

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.16  E-value=0.061  Score=45.80  Aligned_cols=99  Identities=16%  Similarity=0.296  Sum_probs=65.6

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eEeCCCCCCccHHHHHHhhcCC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ...++++++||=+|+|..|..+..+++..+. +|++++.+++..+.+++    .+.. .++..+-  ..    ...+..+
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~--~~----~~~~~~~  122 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG--GI----IKGVVEG  122 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS--CS----STTTCCS
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc--hh----hhhcccC
Confidence            3346789999999998668888888887666 99999999998777753    3431 1221110  00    1112234


Q ss_pred             CccEEEEccCC-------------------------HHHHHHHHHHhccCCeEEEEe
Q 019139          264 GVDYSFECIGN-------------------------VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       264 g~d~v~d~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+|+|+-...-                         ...+..+.+.|+++ |+++++
T Consensus       123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            79999854110                         34577778889997 999875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.14  E-value=0.03  Score=50.74  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=48.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH--HHHHhcCC--ceEeCCCCCCccHHHHHHhhcCC-CccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~--~~~~~~g~--~~~i~~~~~~~~~~~~~~~~~~g-g~d~v  268 (345)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.++.  +.++.++.  ...+...+. .+ .+.+.+...+ ++|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d-~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL-LE-FSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT-TC-HHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC-CC-HHHHHHHHHhcCCCEE
Confidence            568999998 9999999998888999 899998876542  23344321  111111111 11 1223333333 68999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      |.+++.
T Consensus        80 ih~A~~   85 (345)
T 2z1m_A           80 YNLAAQ   85 (345)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.14  E-value=0.084  Score=51.03  Aligned_cols=82  Identities=21%  Similarity=0.268  Sum_probs=52.7

Q ss_pred             CCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-------HHHHHHhcCCceEeCCCCC--CccHHHHHHhh
Q 019139          193 EPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-------KFDRAKNFGVTEFVNPKDH--DKPIQQVLVDL  260 (345)
Q Consensus       193 ~~g--~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-------~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~~  260 (345)
                      +++  .++||+|+ |++|...++.+...|+++++.+.++..       ..+.++..|....+..-+.  .+.+.+.+.+.
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            445  89999988 999999888888899877888777532       1233455676543322221  12333344433


Q ss_pred             cC-CCccEEEEccCC
Q 019139          261 TD-GGVDYSFECIGN  274 (345)
Q Consensus       261 ~~-gg~d~v~d~~g~  274 (345)
                      .. +++|++|.+.|.
T Consensus       315 ~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          315 PEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCeEEEECCcc
Confidence            33 379999999874

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.13  E-value=0.057  Score=48.98  Aligned_cols=99  Identities=18%  Similarity=0.084  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-------eEeCCCCCCccHHHHHHhhcCCCc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-------~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      .+..+||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-..       .-+....  .+..+.+.. ..+.+
T Consensus       107 ~~~~~VLdIG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~--~D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIGGG-DGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC--GDGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEESCT-TSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC--SCHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEcCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE--ChHHHHHHh-cCCCc
Confidence            355799999885 366777777765545999999999988888763211       0011111  234444433 34489


Q ss_pred             cEEEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          266 DYSFECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       266 d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+|+-....          ...++.+.+.|+++ |.+++-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            998854421          34477888899998 9998754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.13  E-value=0.044  Score=47.14  Aligned_cols=76  Identities=16%  Similarity=0.165  Sum_probs=48.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceE----eCCCCCCccHHHHHHhhc--CC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF----VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~----i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+++|+|+ |++|...++.+...|+ +|+++ ++++++.+.+    +..+....    .|..+ .+...+.+.+..  .+
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhcC
Confidence            57899998 9999999999888999 88887 7777665433    22343322    23332 122222222221  14


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.+.|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.13  E-value=0.17  Score=44.78  Aligned_cols=98  Identities=16%  Similarity=0.176  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc--eEeCCCCCCccHHHHHHhhcCCC
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~--~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+.++.+||-+|+| .|..+..+++..|+ ++++++.++...+.+++    .|..  ..+...+. .++     .+..+.
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-----~~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEI-----PCEDNS  150 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSC-----SSCTTC
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccC-----CCCCCC
Confidence            77899999999997 58888888888788 99999999987776653    3331  11111110 010     122347


Q ss_pred             ccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+|+..-.     . ...+..+.+.|+|+ |++++...
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            999986422     2 34578888999998 99988753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.11  E-value=0.047  Score=47.32  Aligned_cols=79  Identities=20%  Similarity=0.218  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++ ++++.+.+    +..+.+..+   |..+ .++..+.+.+..  .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD-ADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            3578999988 9999999999999999 7877665 44443332    334543322   2222 122222222221  1


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.11  E-value=0.16  Score=42.97  Aligned_cols=75  Identities=15%  Similarity=0.080  Sum_probs=54.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|+|+|+|.+|...++.+...|. +|+++++++++.+.+. ..+... +..+-  .+ .+.+.+..-..+|+++-++++.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~--~~-~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDG--SH-KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCT--TS-HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCC--CC-HHHHHhcCcccCCEEEEecCCc
Confidence            48899999999999999999999 8999999999887654 456543 32221  11 2334433233799999999986


Q ss_pred             H
Q 019139          276 S  276 (345)
Q Consensus       276 ~  276 (345)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.10  E-value=0.029  Score=48.23  Aligned_cols=99  Identities=18%  Similarity=0.226  Sum_probs=57.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +.+|+|+|+ |.+|...++.+...|+. +|+++++++++.+....-+...+ .|..+     .+.+.+... ++|++|.+
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d-----~~~~~~~~~-~~d~vi~~   91 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK-----LDDYASAFQ-GHDVGFCC   91 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG-----GGGGGGGGS-SCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCC-----HHHHHHHhc-CCCEEEEC
Confidence            578999998 99999999888888873 68888777654322111122111 12211     112222222 79999999


Q ss_pred             cCCHH--------------HHHHHHHHhcc-CCeEEEEeccCC
Q 019139          272 IGNVS--------------VMRAALECCHK-GWGTSVIVGVAA  299 (345)
Q Consensus       272 ~g~~~--------------~~~~~~~~l~~-~~G~~v~~G~~~  299 (345)
                      +|...              ....+++.+.. +.++++.+++..
T Consensus        92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            98532              12233444433 226899888643

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.09  E-value=0.05  Score=47.63  Aligned_cols=95  Identities=15%  Similarity=0.043  Sum_probs=61.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCC---------------------ceEeCCCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV---------------------TEFVNPKDH  249 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~---------------------~~~i~~~~~  249 (345)
                      ..++.+||..|+|. |..+..+|+. |+ +|++++.++.-.+.+++ .+.                     ..-+...  
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--  140 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC--  140 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES--
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC--
Confidence            46788999999863 7777777764 88 99999999999888854 321                     1111111  


Q ss_pred             CccHHHHHHhhcC-CCccEEEEccC-----C---HHHHHHHHHHhccCCeEEEEec
Q 019139          250 DKPIQQVLVDLTD-GGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       250 ~~~~~~~~~~~~~-gg~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                        ++.+ + .... +.||+|++...     .   ...+..+.+.|+|+ |+++++.
T Consensus       141 --D~~~-l-~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          141 --SIFD-L-PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             --CTTT-G-GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             --cccc-C-CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence              1110 1 1112 58999997532     1   13467788899998 9986543

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.09  E-value=0.07  Score=45.67  Aligned_cols=104  Identities=20%  Similarity=0.318  Sum_probs=66.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      +.......++.+||-+|+|. |..+..+++. |..++++++.+++..+.+++.....-+....  .++.+ . .+..+.+
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~-~-~~~~~~f  108 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYER--ADLDK-L-HLPQDSF  108 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEE--CCGGG-C-CCCTTCE
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEE--cChhh-c-cCCCCCc
Confidence            44555567889999999864 6667777665 6558999999999988887654321111100  11110 0 1223479


Q ss_pred             cEEEEccC-----C-HHHHHHHHHHhccCCeEEEEec
Q 019139          266 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       266 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+|+....     . ...+..+.+.|+++ |++++.-
T Consensus       109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          109 DLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            99986532     1 34578888999997 9988753

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.08  E-value=0.15  Score=46.12  Aligned_cols=40  Identities=18%  Similarity=0.224  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhHHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFD  233 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~---~~~~~  233 (345)
                      .+.+++|+|+|+.|.+++..+...|+++|+++.++   .++.+
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            57899999999999999999999999889999998   55544

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.08  E-value=0.16  Score=46.02  Aligned_cols=91  Identities=19%  Similarity=0.283  Sum_probs=61.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+|.|+|.|.+|...++.++..|.. +|++.++++++.+.+++.|.. .......   +.  .     -...|+||-++.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~---~~--~-----~~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA---KV--E-----DFSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT---GG--G-----GGCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH---HH--h-----hccCCEEEEeCC
Confidence            5799999999999999999999874 799999999999988888863 1211111   10  0     025788888877


Q ss_pred             CHH---HHHHHHHHhccCCeEEEEecc
Q 019139          274 NVS---VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~---~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...   .+..+...++++ ..++.+++
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            543   233444455665 66666654

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.08  E-value=0.17  Score=42.40  Aligned_cols=47  Identities=21%  Similarity=0.256  Sum_probs=37.9

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      ....+.++.+||..|+|. |..+..+++. |+ +|++++.+++-.+.+++
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~   62 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFT   62 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHH
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHH
Confidence            444567889999999863 7777778776 88 99999999998888764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.07  E-value=0.043  Score=48.60  Aligned_cols=79  Identities=18%  Similarity=0.330  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHh-cCCceEe--CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKN-FGVTEFV--NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~~~-~g~~~~i--~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .+.++||+|+ |  ++|...++.+...|+ +|+.++++.  +..+.+.+ .+....+  |..+ .+++.+.+.+..  .+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS-DQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC-HHHHHHHHHHHHHHcC
Confidence            4678999985 4  499999999889999 899988876  44444433 3322222  3322 122222232221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.++|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.06  E-value=0.035  Score=48.72  Aligned_cols=103  Identities=22%  Similarity=0.295  Sum_probs=68.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc--eEeCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~--~~i~~~~~~~~~~~~~~~  259 (345)
                      +.+...++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..  ..+...+. .++     .
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-----~  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA-MDL-----P  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-----C
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc-ccC-----C
Confidence            45667788999999999874 8888888888887 99999999988777654    2332  11111110 010     1


Q ss_pred             hcCCCccEEEEc-----cCC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          260 LTDGGVDYSFEC-----IGN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       260 ~~~gg~d~v~d~-----~g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +..+.+|+|+..     ... ...+..+.+.|+|+ |++++...
T Consensus       125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            222479999853     222 34577888899997 99987653

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.06  E-value=0.11  Score=46.80  Aligned_cols=100  Identities=15%  Similarity=0.086  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC---------CceEeCCCCCCccHHHHHHhhcC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---------VTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g---------~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-         ...-+..    .+..+.+.....
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~~~~~~~  167 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV----GDGLAFVRQTPD  167 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHSSCT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE----CcHHHHHHhccC
Confidence            35678999998863 666777777655559999999998888876532         0111111    233333332234


Q ss_pred             CCccEEEEccCC----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +.+|+|+-....          ...+..+.+.|+++ |.+++...
T Consensus       168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             TCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            589988854321          34577888999998 99988643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.05  E-value=0.044  Score=48.28  Aligned_cols=80  Identities=20%  Similarity=0.162  Sum_probs=50.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc-
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~-  261 (345)
                      ...+.++||+|+ |++|...++.+...|+ +|+.+ .+++++.+.+    ++.+....+   |..+ .+++.+.+.+.. 
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~  100 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDR  100 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHH
Confidence            345789999998 9999999999999999 77665 6666654433    233443222   2322 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.++|
T Consensus       101 ~~g~id~li~nAg  113 (272)
T 4e3z_A          101 QFGRLDGLVNNAG  113 (272)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence             147999999887

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.05  E-value=0.24  Score=44.11  Aligned_cols=87  Identities=20%  Similarity=0.311  Sum_probs=58.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   .    .+..+.+.     ..|+|+-++..+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCH
Confidence            479999999999998888888898 8999999988887776655431   1    12222222     368888888655


Q ss_pred             HHHHHHH-------HHhccCCeEEEEec
Q 019139          276 SVMRAAL-------ECCHKGWGTSVIVG  296 (345)
Q Consensus       276 ~~~~~~~-------~~l~~~~G~~v~~G  296 (345)
                      ..+...+       ..++++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            4344444       345554 5555543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.05  E-value=0.074  Score=45.73  Aligned_cols=78  Identities=14%  Similarity=0.175  Sum_probs=49.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhHHHHHH-h---cCCceE---eCCCCCCccHHHHHHhh
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRAK-N---FGVTEF---VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~------~vi~~~~~~~~~~~~~-~---~g~~~~---i~~~~~~~~~~~~~~~~  260 (345)
                      +.++||+|+ |++|...+..+...|+.      +|+.+++++++.+.+. +   .+....   .|..+ .+.+.+.+.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence            467999998 99999988888888874      6888888877655442 2   233221   23322 12222222222


Q ss_pred             c--CCCccEEEEccC
Q 019139          261 T--DGGVDYSFECIG  273 (345)
Q Consensus       261 ~--~gg~d~v~d~~g  273 (345)
                      .  .+++|+++.+.|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence            1  247999999887

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.04  E-value=0.091  Score=47.06  Aligned_cols=72  Identities=18%  Similarity=0.219  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCC-CccEEE
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDG-GVDYSF  269 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~g-g~d~v~  269 (345)
                      ++..+|||+|+ |.+|...++.+...|+ +|++++++..+ +.   ++...+ .|..+     .+.+.++..+ ++|+||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d-----~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMD-----SQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTC-----HHHHHHHHHHHCCSEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCC-----HHHHHHHHHhcCCCEEE
Confidence            45678999998 9999999999999999 89999887654 21   222211 12222     1223333223 699999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      .+++.
T Consensus        80 h~A~~   84 (321)
T 2pk3_A           80 HLAAK   84 (321)
T ss_dssp             ECCSC
T ss_pred             EcCcc
Confidence            99874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.04  E-value=0.044  Score=47.73  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHH----hcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAK----NFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~-~~~~----~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+ |++|...+..+...|+ +|++++++.++. +.++    +.+....   .|..+ .+++.+.+.+..  .
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence            3568999998 9999999999889999 899888854332 2222    2243322   23332 122333333221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.04  E-value=0.077  Score=45.95  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=30.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFD  233 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~  233 (345)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+ .+++++.+
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~   46 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE   46 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence            5689999998 9999999999999999 77764 55554433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.03  E-value=0.086  Score=50.81  Aligned_cols=83  Identities=19%  Similarity=0.265  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHhcCCceEe---CCCCCCccHHHHHHh
Q 019139          191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEFV---NPKDHDKPIQQVLVD  259 (345)
Q Consensus       191 ~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-------~~~~~~~g~~~~i---~~~~~~~~~~~~~~~  259 (345)
                      .++++.++||+|+ |++|...+..+...|+++|+.+.++...       .+.++..|....+   |..+ .+.+.+.+..
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~  300 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGG  300 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHT
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHHH
Confidence            3577899999988 9999998888888898668888887531       1233455654322   2222 1233333433


Q ss_pred             hcC-CCccEEEEccCC
Q 019139          260 LTD-GGVDYSFECIGN  274 (345)
Q Consensus       260 ~~~-gg~d~v~d~~g~  274 (345)
                      ... +++|.+|.+.|.
T Consensus       301 i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHhcCCCcEEEECCcc
Confidence            322 378999999883

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.01  E-value=0.043  Score=50.14  Aligned_cols=46  Identities=22%  Similarity=0.408  Sum_probs=37.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++..+.+.++++|+
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~  189 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGL  189 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCc
Confidence            47899999999999999999999999 89999987644444555554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.01  E-value=0.076  Score=51.56  Aligned_cols=79  Identities=16%  Similarity=0.242  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHhcCCceEe---CCCCCCccHHHHHHhh
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEFV---NPKDHDKPIQQVLVDL  260 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-------~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~  260 (345)
                      ++++.++||+|+ |++|...+..+...|+++|+.+.++...       .+.++..|....+   |..+ .+.+.+.+.. 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhc-
Confidence            567899999988 9999999988888998668888776531       2233445654322   2222 1222222222 


Q ss_pred             cCCCccEEEEccCC
Q 019139          261 TDGGVDYSFECIGN  274 (345)
Q Consensus       261 ~~gg~d~v~d~~g~  274 (345)
                        +++|++|.+.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              579999999883

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=94.99  E-value=0.066  Score=46.81  Aligned_cols=80  Identities=23%  Similarity=0.319  Sum_probs=50.4

Q ss_pred             CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe--CCCCCCccHHHHHHhhc-
Q 019139          192 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       192 ~~~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i--~~~~~~~~~~~~~~~~~-  261 (345)
                      ...+.+|||+|+   +++|...++.+...|+ +|+.++++++..+.+    ++.+....+  |..+ .+++.+.+.+.. 
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD-DAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC-HHHHHHHHHHHHH
Confidence            356789999974   6899999999999999 899988875544333    233322222  3322 122222222221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.+.|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence             247999999887

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.96  E-value=0.15  Score=47.92  Aligned_cols=110  Identities=15%  Similarity=0.194  Sum_probs=69.6

Q ss_pred             hHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----------cCC--ceE-eCCCC
Q 019139          183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----------FGV--TEF-VNPKD  248 (345)
Q Consensus       183 ~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-----------~g~--~~~-i~~~~  248 (345)
                      +..+.....++++++|+=+|+| .|.+++++|+..|+.+|++++.++.-.+++++           +|.  ..+ +...+
T Consensus       162 i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD  240 (438)
T 3uwp_A          162 VAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  240 (438)
T ss_dssp             HHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred             HHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence            3445677889999999999987 58888899988898679999999865555532           343  222 11111


Q ss_pred             CCccHHHHHHhhcCCCccEEEEcc--CCH---HHHHHHHHHhccCCeEEEEeccC
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECI--GNV---SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~--g~~---~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      . .+..  ..+.. ..+|+||-..  -.+   ..+...++.|+|| |+++.+-..
T Consensus       241 ~-~~lp--~~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          241 F-LSEE--WRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             T-TSHH--HHHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             c-cCCc--ccccc-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            1 1111  11110 2589888421  122   2355667789997 999988543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.95  E-value=0.06  Score=46.30  Aligned_cols=77  Identities=18%  Similarity=0.281  Sum_probs=48.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~-~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.+++|+|+ |++|...++.+...|+ +|++ ..+++++.+.+    +..+....   .|..+ .+++.+.+.+..  .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            467899998 9999999999999999 7877 47777655433    22343222   23322 122222232221  24


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|++|.+.|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.94  E-value=0.23  Score=43.73  Aligned_cols=89  Identities=19%  Similarity=0.303  Sum_probs=60.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhcCC-CccEEEEccC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g  273 (345)
                      +|.|+|+|.+|...++.++..|.. +|+++++++++.+.+++.|... ..  .+    ..+.+     . ..|+|+.++.
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~~----~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TS----IAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SC----GGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--CC----HHHHh-----cCCCCEEEEcCC
Confidence            688999999999999988888852 6899999999888888887641 11  11    11111     2 5789999888


Q ss_pred             CHHH---HHHHHHHhccCCeEEEEecc
Q 019139          274 NVSV---MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~~---~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ....   +..+...++++ ..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            6542   22333445665 66666554

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=94.93  E-value=0.15  Score=46.49  Aligned_cols=90  Identities=17%  Similarity=0.210  Sum_probs=60.2

Q ss_pred             CEEEEEcCChHHHHHHHHHH-H-cCCCeEEEEcCChhHHHH-HHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          196 SIVAVFGLGTVGLAVAEGAK-A-AGASRVIGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~-~-~G~~~vi~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -+|.|+|+|.+|...++.++ . .+++.+.+.++++++.+. ++++|...++.      ++.+.+.   ...+|+|+.++
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHhc---CCCCCEEEEeC
Confidence            47899999999998887776 4 366334456888877654 45677654432      2322221   12799999999


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEec
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ......+.+..+++.+ .. +++.
T Consensus        80 p~~~h~~~~~~al~~G-~~-v~~e  101 (346)
T 3cea_A           80 PTPFHPEMTIYAMNAG-LN-VFCE  101 (346)
T ss_dssp             CGGGHHHHHHHHHHTT-CE-EEEC
T ss_pred             ChHhHHHHHHHHHHCC-CE-EEEc
Confidence            9876678888888874 44 4454

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=94.93  E-value=0.068  Score=44.67  Aligned_cols=96  Identities=15%  Similarity=0.146  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc----eEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~----~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ++++.+||-+|+|. |..+..+++. |..++++++.++...+.+++....    .++..+-  .++     .+..+.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~--~~~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV--RKL-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT--TSC-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch--hcC-----CCCCCcccE
Confidence            47788999999875 7777777776 544899999999988888764321    1111111  010     122347999


Q ss_pred             EEEccC---------------------CHHHHHHHHHHhccCCeEEEEecc
Q 019139          268 SFECIG---------------------NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       268 v~d~~g---------------------~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      |+....                     ....+..+.+.|+++ |++++...
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            986311                     134577788899997 99998765

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.91  E-value=0.15  Score=45.19  Aligned_cols=91  Identities=15%  Similarity=0.123  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ...+.+++|+|+|+.+.+++..+...|+++|+++.++.++. +++++++.+ ..+  +    .       ....+|++++
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~----~-------~~~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--S----L-------ENQQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--C----C-------TTCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--h----h-------hcccCCEEEE
Confidence            34567899999999999999999999987899999997764 445566642 110  1    0       0126899999


Q ss_pred             ccCCHHH-------HHHHHHHhccCCeEEEEecc
Q 019139          271 CIGNVSV-------MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~~g~~~~-------~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++....       .......+.++ ..++.+-.
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            8875321       01112456665 66776654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.91  E-value=0.068  Score=52.09  Aligned_cols=84  Identities=14%  Similarity=0.097  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCh-----------------hHHHHHHhcCCceEeCCCCC--
Q 019139          191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDP-----------------KKFDRAKNFGVTEFVNPKDH--  249 (345)
Q Consensus       191 ~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~-----------------~~~~~~~~~g~~~~i~~~~~--  249 (345)
                      .++++.++||+|+ |++|...++.+...|+..++.+ .++.                 +..+.++..|....+..-+.  
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3577899999988 9999998888888899557776 6662                 12233445566443322221  


Q ss_pred             CccHHHHHHhhcC-CCccEEEEccCC
Q 019139          250 DKPIQQVLVDLTD-GGVDYSFECIGN  274 (345)
Q Consensus       250 ~~~~~~~~~~~~~-gg~d~v~d~~g~  274 (345)
                      .+.+.+.+..... +++|++|.+.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            1233333433332 379999999883

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.91  E-value=0.068  Score=47.57  Aligned_cols=92  Identities=15%  Similarity=0.196  Sum_probs=56.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHH---hcCCceE-eCCCCCCccHHHHHHhhcC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-------~~~~~~~---~~g~~~~-i~~~~~~~~~~~~~~~~~~  262 (345)
                      +.+|+|+|+ |.+|...+..+...|+ +|++++++.       ++.+.++   ..++..+ .|..+     .+.+.+...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-----~~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND-----HETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC-----HHHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC-----HHHHHHHHh
Confidence            357999998 9999999998888898 888888875       4443332   3455432 23322     123333332


Q ss_pred             CCccEEEEccCCH--HHHHHHHHHhccC--CeEEE
Q 019139          263 GGVDYSFECIGNV--SVMRAALECCHKG--WGTSV  293 (345)
Q Consensus       263 gg~d~v~d~~g~~--~~~~~~~~~l~~~--~G~~v  293 (345)
                       ++|+||.+++..  .....+++.++..  -.+++
T Consensus        76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence             699999998842  2234455555432  14666

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.90  E-value=0.15  Score=50.53  Aligned_cols=79  Identities=24%  Similarity=0.289  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHhcCCceEeCCCCCCcc---HHHHHHhhcCCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFVNPKDHDKP---IQQVLVDLTDGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~~~~g~~~~i~~~~~~~~---~~~~~~~~~~gg~d~  267 (345)
                      .+.+++|+|+ +++|.+.++.+...|+ +|++.++..  +-.+.+++.|...+....+...+   +.+.+.+.. |++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            3678899998 9999999999999999 888876432  22334445565444333221011   122222222 47999


Q ss_pred             EEEccCC
Q 019139          268 SFECIGN  274 (345)
Q Consensus       268 v~d~~g~  274 (345)
                      ++++.|-
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=94.90  E-value=0.071  Score=48.77  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHH-hcCCc--eEe--CCCCCCccHHHHHHhhcCCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK-NFGVT--EFV--NPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~-~~g~~--~~i--~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      .+.+|||+|+ |.+|...++.+... |+.+|+++++++.+.+.+. .+...  ..+  |..+     .+.+.+... ++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~l~~~~~-~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-----LERLNYALE-GVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-----HHHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-----HHHHHHHHh-cCC
Confidence            4678999998 99999998888887 8668999999887765443 23211  122  2222     223333332 799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +||.+++.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.90  E-value=0.025  Score=48.86  Aligned_cols=70  Identities=27%  Similarity=0.340  Sum_probs=43.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|||+|+ |.+|...+..+...|+ +|++++++.++.+.      ....|..+ ...+.+.+.++ .+++|+++.+.|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~~-~~~~~~~~~~~-~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGGR-ETAVAAVLDRC-GGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHH-HHHHHHHHHHH-TTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCccc-HHHHHHHHHHc-CCCccEEEECCCC
Confidence            36899998 9999999998888999 89998887654210      10001100 01122222222 2589999998873

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=94.87  E-value=0.094  Score=46.16  Aligned_cols=90  Identities=14%  Similarity=0.195  Sum_probs=62.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|+|+|+|.+|...+..+...|+ +|+++++++.+.+.+...+.+.+. |..+    +.       -.++|+||.+++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE----PS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC----CC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc----cc-------cCCCCEEEECCCc
Confidence            579999999999999999988999 999999999888777666654332 2221    11       2379999999874


Q ss_pred             H----HHHHHHHHHhcc---CCeEEEEecc
Q 019139          275 V----SVMRAALECCHK---GWGTSVIVGV  297 (345)
Q Consensus       275 ~----~~~~~~~~~l~~---~~G~~v~~G~  297 (345)
                      .    .....+++.++.   +-.+++.+++
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    223445555433   1257887764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.84  E-value=0.12  Score=46.16  Aligned_cols=92  Identities=17%  Similarity=0.146  Sum_probs=57.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhHHHHHH---hcCCceE-eCCCCCCccHHHHHHhhcCCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-----PKKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-----~~~~~~~~---~~g~~~~-i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ..+|+|+|+ |.+|...+..+...|+ +|++++++     .++.+.++   ..++..+ .|..+     .+.+.+... +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-----~~~l~~~~~-~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD-----HQRLVDALK-Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC-----HHHHHHHHT-T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC-----HHHHHHHHh-C
Confidence            357999998 9999999999999998 89998887     34443332   2344322 12222     123333332 6


Q ss_pred             ccEEEEccCCH------HHHHHHHHHhccC--CeEEE
Q 019139          265 VDYSFECIGNV------SVMRAALECCHKG--WGTSV  293 (345)
Q Consensus       265 ~d~v~d~~g~~------~~~~~~~~~l~~~--~G~~v  293 (345)
                      +|+||.+++..      .....+++.++..  -.+++
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            99999998743      1234555665543  13776

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.83  E-value=0.073  Score=49.80  Aligned_cols=85  Identities=20%  Similarity=0.186  Sum_probs=51.7

Q ss_pred             hhcCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhH----------------HHHHHhcCCceEe---C
Q 019139          188 NTAKV-EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKK----------------FDRAKNFGVTEFV---N  245 (345)
Q Consensus       188 ~~~~~-~~g~~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~~----------------~~~~~~~g~~~~i---~  245 (345)
                      ....+ ..+.++||+|+ +++|.+.+..+.. .|+ +|++++++++.                .+.+++.|.....   |
T Consensus        39 ~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~D  117 (405)
T 3zu3_A           39 TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGD  117 (405)
T ss_dssp             HHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             hcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECC
Confidence            34455 55678899988 8999998887777 999 88887654322                2234555654332   3


Q ss_pred             CCCCCccHHHHHHhh--cCCCccEEEEccCC
Q 019139          246 PKDHDKPIQQVLVDL--TDGGVDYSFECIGN  274 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~--~~gg~d~v~d~~g~  274 (345)
                      ..+ ++...+.+...  .-|++|++++++|.
T Consensus       118 vtd-~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          118 AFS-DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             TTS-HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CCC-HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            322 12222222222  12589999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.83  E-value=0.03  Score=50.64  Aligned_cols=79  Identities=14%  Similarity=0.035  Sum_probs=47.1

Q ss_pred             cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHhc----CCceE-eCCCCCCccHHHHHHhhc
Q 019139          190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNF----GVTEF-VNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       190 ~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~~~~----g~~~~-i~~~~~~~~~~~~~~~~~  261 (345)
                      -+-+++.+|||+|+ |.+|...++.+...|+ +|++++++..+  .+.++.+    +...+ .|..+     .+.+.++.
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~   82 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-----ACSVQRAV   82 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-----HHHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC-----HHHHHHHH
Confidence            34567899999998 9999999999998998 89998886543  1222222    11111 12222     12333333


Q ss_pred             CC-CccEEEEccCC
Q 019139          262 DG-GVDYSFECIGN  274 (345)
Q Consensus       262 ~g-g~d~v~d~~g~  274 (345)
                      .+ ++|+||.+++.
T Consensus        83 ~~~~~d~Vih~A~~   96 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHHCCSEEEECCSC
T ss_pred             HHcCCCEEEECccc
Confidence            33 68999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.82  E-value=0.051  Score=47.36  Aligned_cols=78  Identities=18%  Similarity=0.325  Sum_probs=48.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhHHHHHH-hcCCceEe---CCCCCCccHHHHHHhhc--CCCc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAK-NFGVTEFV---NPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G--~~~vi~~~~~~~~~~~~~-~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      +.++||+|+ +++|...++.+...|  + .|+.+++++++.+.+. +++....+   |..+ .++..+.+.+..  .+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCc
Confidence            468999998 999999887666654  6 8888889888766553 34433222   3332 122222222221  1479


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.82  E-value=0.018  Score=50.63  Aligned_cols=75  Identities=12%  Similarity=0.144  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-EeCCCCCCccHHHHHHhhc--CCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~~~~--~gg~d~v~  269 (345)
                      .+.++||+|+ |++|...+..+...|+ +|+.++++.++.+.   ..+.. ..|..+ +++..+.+.+..  .+++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISK-PETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTS-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999998 9999999999999999 89998887654211   11111 123322 122222222221  14799999


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      .+.|
T Consensus       102 ~nAg  105 (260)
T 3un1_A          102 NNAG  105 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.82  E-value=0.088  Score=46.91  Aligned_cols=91  Identities=8%  Similarity=-0.026  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCC---ceEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~---~~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+.+++|+|+|+.|.+.+..+...|+.+|+++.++.++.+.+ ++++.   ...+...+           +. ..+|+|+
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEEE
Confidence            578999999999999999988889977899999988875544 44432   12221111           11 3799999


Q ss_pred             EccCCHHHHHH---HHHHhccCCeEEEEecc
Q 019139          270 ECIGNVSVMRA---ALECCHKGWGTSVIVGV  297 (345)
Q Consensus       270 d~~g~~~~~~~---~~~~l~~~~G~~v~~G~  297 (345)
                      ++++.......   -...++++ ..++.+-.
T Consensus       193 naTp~gm~~~~~~l~~~~l~~~-~~V~DlvY  222 (281)
T 3o8q_A          193 NSTSASLDGELPAIDPVIFSSR-SVCYDMMY  222 (281)
T ss_dssp             ECSCCCC----CSCCGGGEEEE-EEEEESCC
T ss_pred             EcCcCCCCCCCCCCCHHHhCcC-CEEEEecC
Confidence            99875321110   12345664 55566643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.81  E-value=0.073  Score=47.43  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=49.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc----CCce-EeCCCCCCccHHHHHHhhcCCCc
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~----g~~~-~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      -++.+++|+|+ |++|.+.+..+...|+ +|+.++++.++.+.+ +++    +... ..|..+     .+.+.+... .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~-----~~~~~~~~~-~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAVK-GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHTT-TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC-----HHHHHHHHH-hC
Confidence            36789999994 9999999999999999 798999987765533 222    2221 123322     122333222 48


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |++++++|
T Consensus       190 DvlVn~ag  197 (287)
T 1lu9_A          190 HFVFTAGA  197 (287)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999997

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.81  E-value=0.054  Score=49.08  Aligned_cols=77  Identities=19%  Similarity=0.154  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHh-cCCc-eEeCCCCCCccHHHHHHhhcC-CCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKN-FGVT-EFVNPKDHDKPIQQVLVDLTD-GGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~-~g~~-~~i~~~~~~~~~~~~~~~~~~-gg~  265 (345)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++..    .+.. .+.. ..+..+-  .+ .+.+.++.. +++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d-~~~~~~~~~~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDV--SD-ERALARIFDAHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT--TC-HHHHHHHHHHSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeec--CC-HHHHHHHHhccCC
Confidence            4568999998 9999999999999999 8999887654321    1111 1221 2221111  11 122333222 379


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999874

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=94.78  E-value=0.07  Score=47.54  Aligned_cols=101  Identities=16%  Similarity=0.063  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-------eEeCCCCCCccHHHHHHhhcCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-------~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ..++.+||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-..       .-+....  .+..+.+... .+.
T Consensus        76 ~~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVGGG-DGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--EDASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEECT-TSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHHHHHC-CSC
T ss_pred             CCCCCeEEEEeCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE--CChHHHHHhC-CCC
Confidence            3456899999875 366666777665555999999999988888763210       0000001  2333333332 458


Q ss_pred             ccEEEEccCC----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIGN----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+|+-....          ...++.+.+.|+++ |.+++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~~  193 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQCE  193 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEECC
Confidence            9988852211          35578888999998 99987743

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=94.77  E-value=0.036  Score=48.01  Aligned_cols=75  Identities=23%  Similarity=0.139  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChh-HHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~-~G~~~vi~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.++||+|+ |++|...++.+.. .|+ +|+.++++++ ..+.   . .....|..+ .++..+.+.....+++|+++.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~---~-~~~~~Dv~~-~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAEN---L-KFIKADLTK-QQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTT---E-EEEECCTTC-HHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEecccccccccc---c-eEEecCcCC-HHHHHHHHHHHHhCCCCEEEE
Confidence            4568999998 9999998876666 677 8888877654 2110   0 001123332 123333343333348999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.|.
T Consensus        77 nAg~   80 (244)
T 4e4y_A           77 NAGI   80 (244)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9884

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=94.74  E-value=0.12  Score=46.36  Aligned_cols=97  Identities=12%  Similarity=0.081  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC------C--ceE-eCCCCCCccHHHHHHhhcCC
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V--TEF-VNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g------~--~~~-i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-      .  ..+ +..    .+..+.+.. ..+
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~l~~-~~~  162 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI----ANGAEYVRK-FKN  162 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHGGG-CSS
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE----CcHHHHHhh-CCC
Confidence            3458999998853 666777777666559999999999888876531      0  111 111    223332222 234


Q ss_pred             CccEEEEccCC-----------HHHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|+|+-....           ...++.+.+.|+++ |.+++..
T Consensus       163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            79988843221           34578888999998 9998864

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.74  E-value=0.034  Score=48.44  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHH----HHHHhcCCceEe---CCCCCCccHHHHHHhhc-
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKF----DRAKNFGVTEFV---NPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~-~~~~~~----~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~-  261 (345)
                      ..++.++||+|+ |++|...+..+...|+ +|+.++ ++.++.    +.+++.+.+..+   |..+ .++..+.+.+.. 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD-WDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCC-HHHHHHHHHHHHH
Confidence            356788999998 9999999999999999 777766 433332    233344443222   2222 122222232221 


Q ss_pred             -CCCccEEEEccC
Q 019139          262 -DGGVDYSFECIG  273 (345)
Q Consensus       262 -~gg~d~v~d~~g  273 (345)
                       .+++|+++.+.|
T Consensus        88 ~~g~id~lv~~Ag  100 (256)
T 3ezl_A           88 EVGEIDVLVNNAG  100 (256)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             247999999988

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=94.72  E-value=0.082  Score=47.70  Aligned_cols=99  Identities=18%  Similarity=0.117  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-----C--CceE--eCCCCCCccHHHHHHhhcC
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-----G--VTEF--VNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-----g--~~~~--i~~~~~~~~~~~~~~~~~~  262 (345)
                      .++.+|||+|+ |.+|...+..+...|+ +|++++++.++.+.+...     +  ...+  .|..+ ...    +.++. 
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~----~~~~~-   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGA----YDEVI-   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTT----TTTTT-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC-hHH----HHHHH-
Confidence            45679999998 9999999999888999 899998987765544321     2  1112  13322 111    12222 


Q ss_pred             CCccEEEEccCCH--------------HHHHHHHHHhc--cCCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV--------------SVMRAALECCH--KGWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~--------------~~~~~~~~~l~--~~~G~~v~~G~~  298 (345)
                      .++|+||.+++..              .....+++.+.  .+.++++.+++.
T Consensus        82 ~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           82 KGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             TTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             cCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence            2799999998732              11233444443  222689888753

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.71  E-value=0.086  Score=48.49  Aligned_cols=36  Identities=42%  Similarity=0.457  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++..
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~  202 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLS  202 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcc
Confidence            57899999999999999999999999 8999887654

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=94.70  E-value=0.21  Score=42.23  Aligned_cols=95  Identities=19%  Similarity=0.290  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-----------eEeCCCCCCccHHHHHHhh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-----------EFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-----------~~i~~~~~~~~~~~~~~~~  260 (345)
                      ++++.+||-+|+|. |..+..+++. |. ++++++.++...+.+++....           .++..+-  ..+     ..
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~--~~~-----~~   97 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA--SSL-----SF   97 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT--TSC-----CS
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc--ccc-----CC
Confidence            46788999999874 7777777776 77 999999999988888763221           1111111  010     11


Q ss_pred             cCCCccEEEEccC-----CH----HHHHHHHHHhccCCeEEEEecc
Q 019139          261 TDGGVDYSFECIG-----NV----SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~gg~d~v~d~~g-----~~----~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..+.+|+|+-...     .+    ..+..+.+.|+++ |++++...
T Consensus        98 ~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  142 (235)
T 3sm3_A           98 HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEF  142 (235)
T ss_dssp             CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEEC
Confidence            2347999885422     22    4578888999998 99988754

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=94.70  E-value=0.063  Score=47.35  Aligned_cols=101  Identities=18%  Similarity=0.164  Sum_probs=65.0

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE--eCCCCCCccHHHHHHhhcCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~--i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +.....+.++.+||=+|+| .|.++..+++. |+ .|++++.+++-.+.+++.-....  .+..+.+..    ......+
T Consensus        37 il~~l~l~~g~~VLDlGcG-tG~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~  109 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAS-TRFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAG  109 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTT-CHHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTT
T ss_pred             HHHhcCCCCcCEEEEEeCc-chHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCC
Confidence            3456678899999999997 47888888774 77 89999999999888876432221  111110000    0011134


Q ss_pred             CccEEEEccC-----C---HHHHHHHHHHhccCCeEEEEe
Q 019139          264 GVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       264 g~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+|+|+.+..     .   ...+..+.+.| |+ |++++.
T Consensus       110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            7999986532     1   12466777788 97 998754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.70  E-value=0.091  Score=45.92  Aligned_cols=78  Identities=23%  Similarity=0.404  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HhcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~---~~~~~-~~~g~~~~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      .+.++||+|+   |++|...++.+...|+ +|++++++++   ..+.+ .+.+....+  |..+ .+++.+.+.+..  .
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4678999986   5999999988888899 8999888765   22222 223422222  3332 122222222221  1


Q ss_pred             CCccEEEEccC
Q 019139          263 GGVDYSFECIG  273 (345)
Q Consensus       263 gg~d~v~d~~g  273 (345)
                      +++|+++.+.|
T Consensus        85 g~iD~lv~~Ag   95 (261)
T 2wyu_A           85 GGLDYLVHAIA   95 (261)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.70  E-value=0.13  Score=46.82  Aligned_cols=46  Identities=26%  Similarity=0.354  Sum_probs=37.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      .+.+|.|+|.|.+|...++.++..|+ +|++.+++.++.+.+.+.|.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~  199 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQA  199 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCc
Confidence            46799999999999999999999999 89999887655554555553

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=94.68  E-value=0.051  Score=47.89  Aligned_cols=75  Identities=16%  Similarity=0.069  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc--CCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d  270 (345)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++. ..+.+  ....|..+ .++....+.+..  -|++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv~~-~~~v~~~~~~~~~~~G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADLTT-KEGCAIVAEATRQRLGGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCTTS-HHHHHHHHHHHHHHTSSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999988 9999999999999999 899988865421 00111  11223332 122222222221  247999999


Q ss_pred             ccC
Q 019139          271 CIG  273 (345)
Q Consensus       271 ~~g  273 (345)
                      +.|
T Consensus        85 nAG   87 (261)
T 4h15_A           85 MLG   87 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            876

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.67  E-value=0.2  Score=44.49  Aligned_cols=41  Identities=32%  Similarity=0.438  Sum_probs=36.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      .+|.|+|+|.+|...++.+...|+ +|+..++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            579999999999999999999999 99999999988776654

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=94.67  E-value=0.14  Score=46.91  Aligned_cols=91  Identities=15%  Similarity=0.136  Sum_probs=61.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      .+|.|+|.|.+|...+..++..|. +|++.++++++.+.++++|+...       .+..+.+.+. ....|+||-++...
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a-~~~aDlVilavP~~   79 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRA-AAEDALIVLAVPMT   79 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHH-HHTTCEEEECSCHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhc-ccCCCEEEEeCCHH
Confidence            569999999999999999999998 89999999999998888887422       1222333221 01468888887743


Q ss_pred             HHHHHHHHH---hccCCeEEEEecc
Q 019139          276 SVMRAALEC---CHKGWGTSVIVGV  297 (345)
Q Consensus       276 ~~~~~~~~~---l~~~~G~~v~~G~  297 (345)
                      . +...+..   ++++ ..++.+++
T Consensus        80 ~-~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           80 A-IDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             H-HHHHHHHHHHHCTT-CCEEECCS
T ss_pred             H-HHHHHHHHHccCCC-CEEEEcCC
Confidence            2 3333332   2454 45555554

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.66  E-value=0.15  Score=45.47  Aligned_cols=45  Identities=31%  Similarity=0.355  Sum_probs=36.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      .++.+||=+|+| .|..++.+++..+..+|++++.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG-~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCN-VGHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCT-TCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCC-CCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            467899999986 478888999987655999999999888877653

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=94.66  E-value=0.097  Score=45.29  Aligned_cols=100  Identities=14%  Similarity=0.105  Sum_probs=67.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +.......++.+||-+|+| .|..+..+++.. +. ++++++.+++..+.+++.... .++..+-  .++      ...+
T Consensus        25 l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~------~~~~   94 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL--ATW------KPAQ   94 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT--TTC------CCSS
T ss_pred             HHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh--hhc------CccC
Confidence            4456667888999999987 477778888776 55 899999999988888764221 1221111  111      0124


Q ss_pred             CccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|+|+....     . ...+..+.+.|+++ |++++.-
T Consensus        95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           95 KADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             CEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            7999987542     2 34467777889997 9988764

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.63  E-value=0.28  Score=45.22  Aligned_cols=90  Identities=12%  Similarity=0.224  Sum_probs=60.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      ..+|.|+|.|.+|...+..+...|+ +|++.++++++.+.+.+.|+..   .    .+..+.+...  ...|+||-++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~----~s~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---A----RSIEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---C----SSHHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---e----CCHHHHHhcC--CCCCEEEEeCCH
Confidence            3579999999999999999999998 9999999999988887766531   1    2233333321  135788877776


Q ss_pred             HHHHHHHHH----HhccCCeEEEEec
Q 019139          275 VSVMRAALE----CCHKGWGTSVIVG  296 (345)
Q Consensus       275 ~~~~~~~~~----~l~~~~G~~v~~G  296 (345)
                      .. +...+.    .++++ ..++.++
T Consensus        92 ~~-v~~vl~~l~~~l~~g-~iiId~s  115 (358)
T 4e21_A           92 AV-VDSMLQRMTPLLAAN-DIVIDGG  115 (358)
T ss_dssp             GG-HHHHHHHHGGGCCTT-CEEEECS
T ss_pred             HH-HHHHHHHHHhhCCCC-CEEEeCC
Confidence            52 443333    33443 4555444

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=94.62  E-value=0.13  Score=46.41  Aligned_cols=98  Identities=15%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---------ceEeCCCCCCccHHHHHHhhcC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~---------~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ..++.+||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-.         ..-+..    .+..+.+.. ..
T Consensus        93 ~~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~----~Da~~~l~~-~~  166 (304)
T 2o07_A           93 HPNPRKVLIIGGG-DGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV----GDGFEFMKQ-NQ  166 (304)
T ss_dssp             SSSCCEEEEEECT-TSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHT-CS
T ss_pred             CCCCCEEEEECCC-chHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE----CcHHHHHhh-CC
Confidence            3566899999885 36677777776555599999999998888865311         111111    233333332 33


Q ss_pred             CCccEEEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +.+|+|+-....          ...++.+.+.|+++ |.+++-.
T Consensus       167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            589988843322          23478888999998 9998754

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.61  E-value=0.16  Score=43.88  Aligned_cols=98  Identities=17%  Similarity=0.169  Sum_probs=67.1

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCccHHHHHHhhcCC
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~--~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ..++++.+||-+|+|. |..+..+++..+. +|++++.++...+.+++    .|...  .+...+. .++     .+..+
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-----~~~~~  113 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNL-----PFQNE  113 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSC-----SSCTT
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhC-----CCCCC
Confidence            3678889999999974 8889999999887 99999999988777653    34321  1111110 111     02234


Q ss_pred             CccEEEEc-----cCCHHHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFEC-----IGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d~-----~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|+|+..     ..-...+..+.+.|+|+ |++++..
T Consensus       114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             CEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            79999753     22345578888899998 9998875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.60  E-value=0.042  Score=49.73  Aligned_cols=72  Identities=22%  Similarity=0.204  Sum_probs=46.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      -+|||+|+ |.+|...++.+...|+ +|++++++..+.+.+...+...+ .|..+     .+.+.+... ++|+||.+++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d-----~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD-----HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC-----HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC-----HHHHHHHHc-CCCEEEECCc
Confidence            37999998 9999999999999998 89999887765433332233322 12222     223333333 6999999987


Q ss_pred             C
Q 019139          274 N  274 (345)
Q Consensus       274 ~  274 (345)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=94.59  E-value=0.19  Score=45.85  Aligned_cols=38  Identities=29%  Similarity=0.369  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~  182 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE  182 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh
Confidence            46799999999999999999999999 899998877653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=94.59  E-value=0.061  Score=46.98  Aligned_cols=77  Identities=13%  Similarity=0.137  Sum_probs=47.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHh----cCCceE---eCCCCCCccHHHHHHhhcC--C
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAKN----FGVTEF---VNPKDHDKPIQQVLVDLTD--G  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-~~~~~~~~~----~g~~~~---i~~~~~~~~~~~~~~~~~~--g  263 (345)
                      +.+++|+|+ |++|...++.+...|+ +|+.+.++ ++..+.+++    .+....   .|..+ .+++.+.+.+...  +
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            578999998 9999999999999999 78877554 444444332    222221   23332 1222333332221  3


Q ss_pred             CccEEEEccC
Q 019139          264 GVDYSFECIG  273 (345)
Q Consensus       264 g~d~v~d~~g  273 (345)
                      ++|+++.++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.51  E-value=0.053  Score=47.49  Aligned_cols=34  Identities=32%  Similarity=0.388  Sum_probs=30.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999888888654

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.50  E-value=0.23  Score=40.47  Aligned_cols=101  Identities=15%  Similarity=0.107  Sum_probs=66.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce---EeCCCCCCccHHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLV  258 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~---~i~~~~~~~~~~~~~~  258 (345)
                      +.+....+++.+||-+|+| .|..+..+++. +. ++++++.+++..+.+++    .+...   .+...+    +.+   
T Consensus        44 l~~~~~~~~~~~vLdiG~G-~G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d----~~~---  113 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCG-YGVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----LYE---  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----TTT---
T ss_pred             HHHHcccCCCCeEEEeCCC-CCHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc----hhc---
Confidence            4455667788999999986 37777777777 76 99999999988777754    24331   111111    100   


Q ss_pred             hhcCCCccEEEEccCC-------HHHHHHHHHHhccCCeEEEEecc
Q 019139          259 DLTDGGVDYSFECIGN-------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g~-------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ....+.+|+|+....-       ...+..+.+.|+++ |++++...
T Consensus       114 ~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  158 (194)
T 1dus_A          114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQ  158 (194)
T ss_dssp             TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEEC
Confidence            0113479999865431       23467777889997 99988765

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=94.50  E-value=0.2  Score=45.29  Aligned_cols=102  Identities=20%  Similarity=0.288  Sum_probs=64.9

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ....++++++||=.|+|+ |..++++++.++ ...|++++.++.+.+.+++    +|...+.....+..++.    . ..
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~----~-~~  185 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG----E-LN  185 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG----G-GC
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc----c-cc
Confidence            344678899999888753 667777887763 2389999999998887753    46532211111001111    1 23


Q ss_pred             CCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFE---CIGN-------------------------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +.+|.|+-   |+|.                         ...+..+.+.|+++ |+++..-
T Consensus       186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~st  246 (315)
T 1ixk_A          186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  246 (315)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEe
Confidence            47998874   3331                         24567888999997 9998753

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.49  E-value=0.28  Score=43.55  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   .    .+..+.+.     ..|+||-++..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V----SSPADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c----CCHHHHHh-----cCCEEEEeCCCHH
Confidence            47889999999998888888898 8999999988888777766431   1    12222222     3677777776544


Q ss_pred             HHHHHHH
Q 019139          277 VMRAALE  283 (345)
Q Consensus       277 ~~~~~~~  283 (345)
                      .+...+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            4555443

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=94.49  E-value=0.15  Score=46.13  Aligned_cols=94  Identities=13%  Similarity=0.075  Sum_probs=63.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhc-CCc----eEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF-GVT----EFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~-g~~----~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +..    .-+..    .+..+.+.....+.||+||
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~----~Da~~~l~~~~~~~fDvIi  164 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV----DDARMVAESFTPASRDVII  164 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE----SCHHHHHHTCCTTCEEEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE----CcHHHHHhhccCCCCCEEE
Confidence            3899998863 67777888865 66 899999999999988764 221    11111    2344455444445899888


Q ss_pred             EccC----------CHHHHHHHHHHhccCCeEEEEec
Q 019139          270 ECIG----------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       270 d~~g----------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      -...          ....+..+.+.|+++ |.+++--
T Consensus       165 ~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          165 RDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             ECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            5322          134578888999998 9887654

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.49  E-value=0.13  Score=45.57  Aligned_cols=96  Identities=18%  Similarity=0.135  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC------C--ceE-eCCCCCCccHHHHHHhhcCCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V--TEF-VNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g------~--~~~-i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  ..+ +..    .+..+.+.. ..+.
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~----~D~~~~l~~-~~~~  148 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV----DDGFMHIAK-SENQ  148 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE----SCSHHHHHT-CCSC
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE----CcHHHHHhh-CCCC
Confidence            568999998853 666677777667669999999999888887531      1  111 111    122333332 2348


Q ss_pred             ccEEEEccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          265 VDYSFECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d~v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+|+-....          ...++.+.+.|+++ |.+++-.
T Consensus       149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9988854332          34588999999998 9998764

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=94.48  E-value=0.045  Score=44.23  Aligned_cols=98  Identities=15%  Similarity=0.184  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      +...++++.+||-+|+|. |..+..+++.. . ++++++.+++..+.+++......+..    .+     ..+..+.+|+
T Consensus        11 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~----~d-----~~~~~~~~D~   78 (170)
T 3i9f_A           11 PNIFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLS----DP-----KEIPDNSVDF   78 (170)
T ss_dssp             HHHHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEES----SG-----GGSCTTCEEE
T ss_pred             HhcCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEe----CC-----CCCCCCceEE
Confidence            344567888999999864 77777777765 4 89999999998888876522111111    11     2233348999


Q ss_pred             EEEccCC------HHHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGN------VSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~------~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |+....-      ...+..+.+.|+++ |++++....
T Consensus        79 v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  114 (170)
T 3i9f_A           79 ILFANSFHDMDDKQHVISEVKRILKDD-GRVIIIDWR  114 (170)
T ss_dssp             EEEESCSTTCSCHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEccchhcccCHHHHHHHHHHhcCCC-CEEEEEEcC
Confidence            9864331      24578888999998 999988653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.45  E-value=0.12  Score=46.27  Aligned_cols=92  Identities=16%  Similarity=0.154  Sum_probs=57.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|||+|+ |.+|...++.+...|+ +|++++++..+.+ ++  +.. ++..+   -. .+.+.+... ++|+||.+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D---l~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD---YT-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC---CC-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc---cc-HHHHHHhhc-CCCEEEEcccc
Confidence            57999998 9999999999999999 8999988855544 33  332 22221   22 444555443 79999999874


Q ss_pred             H-------------HHHHHHHHHhccC-CeEEEEecc
Q 019139          275 V-------------SVMRAALECCHKG-WGTSVIVGV  297 (345)
Q Consensus       275 ~-------------~~~~~~~~~l~~~-~G~~v~~G~  297 (345)
                      .             .....+++.++.. -.+++.+++
T Consensus        73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            2             1124445555432 146887764

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=94.44  E-value=0.13  Score=47.66  Aligned_cols=87  Identities=20%  Similarity=0.298  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+.+.|+..        .++.+.+.     ..|+|+-++.
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHHHHHh-----cCCEEEEcCc
Confidence            37899999999999999999999999 899998874 334455566531        12222221     3566665544


Q ss_pred             CH----HHH-HHHHHHhccCCeEEEEec
Q 019139          274 NV----SVM-RAALECCHKGWGTSVIVG  296 (345)
Q Consensus       274 ~~----~~~-~~~~~~l~~~~G~~v~~G  296 (345)
                      ..    ..+ ...+..++++ +.++.++
T Consensus       240 lt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             CCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            21    111 3445556665 6666665

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.44  E-value=0.18  Score=46.33  Aligned_cols=37  Identities=24%  Similarity=0.418  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++...
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~  208 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLS  208 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCC
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcc
Confidence            36799999999999999999999999 99999887543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.44  E-value=0.17  Score=48.28  Aligned_cols=93  Identities=12%  Similarity=0.011  Sum_probs=56.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEe--CCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i--~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +.+|+|+|+|.+|...++.+...|+ +|++++++.++.+.+. .++....+  |..+    . +.+.+... ++|+|+++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d----~-~~l~~~l~-~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND----D-AALDAEVA-KHDLVISL   75 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC----H-HHHHHHHT-TSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC----H-HHHHHHHc-CCcEEEEC
Confidence            4689999999999999888888898 7988899887765443 23311121  2222    1 22222222 69999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEe
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ++..........++.++ ..++..
T Consensus        76 a~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             CC--CHHHHHHHHHHHT-CEEEES
T ss_pred             CccccchHHHHHHHhCC-CeEEEe
Confidence            98532122334455554 455544

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=94.43  E-value=0.12  Score=42.94  Aligned_cols=95  Identities=16%  Similarity=0.214  Sum_probs=61.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      +.++ +||-+|+|. |..+..+++. |. ++++++.+++..+.+++.    +....+...+. .++     .+..+.+|+
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-----~~~~~~fD~   97 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADF-----DIVADAWEG   97 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTB-----SCCTTTCSE
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhc-----CCCcCCccE
Confidence            4566 899999864 7777777765 77 999999999887777543    32222222110 111     122347999


Q ss_pred             EEEccCC------HHHHHHHHHHhccCCeEEEEecc
Q 019139          268 SFECIGN------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       268 v~d~~g~------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      |+.+...      ...+..+.+.|+++ |++++...
T Consensus        98 v~~~~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  132 (202)
T 2kw5_A           98 IVSIFCHLPSSLRQQLYPKVYQGLKPG-GVFILEGF  132 (202)
T ss_dssp             EEEECCCCCHHHHHHHHHHHHTTCCSS-EEEEEEEE
T ss_pred             EEEEhhcCCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            9875331      23466777889997 99988764

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=94.43  E-value=0.13  Score=43.63  Aligned_cols=102  Identities=17%  Similarity=0.245  Sum_probs=64.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +...++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    ..--.++..+-  .+.. .. ....
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~--~~~~-~~-~~~~  141 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPE-EY-RALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGG-GG-TTTC
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC--CCcc-hh-hccc
Confidence            344578899999999975 8888888888652 389999999976555533    21111111111  1100 00 0112


Q ss_pred             CCccEEEEccCCH----HHHHHHHHHhccCCeEEEEe
Q 019139          263 GGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       263 gg~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +.+|+|+-....+    ..+..+.+.|+++ |++++.
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            3799998655543    2277788999998 999887

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.41  E-value=0.15  Score=46.28  Aligned_cols=92  Identities=15%  Similarity=0.098  Sum_probs=57.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHH---HhcCCceEe-CCCCCCccHHHHHHhhcCC-Cc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA---KNFGVTEFV-NPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~---~~~g~~~~i-~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      .+|+|+|+ |.+|...+..+...|+ +|++++++.    ++.+.+   +..++..+. |..+     .+.+.+.... ++
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-----~~~l~~~~~~~~~   84 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-----QEAMEKILKEHEI   84 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-----HHHHHHHHHHTTC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-----HHHHHHHHhhCCC
Confidence            57999998 9999999999999998 899988866    444433   334554332 2222     2223333222 79


Q ss_pred             cEEEEccCCH--HHHHHHHHHhccCCe---EEEE
Q 019139          266 DYSFECIGNV--SVMRAALECCHKGWG---TSVI  294 (345)
Q Consensus       266 d~v~d~~g~~--~~~~~~~~~l~~~~G---~~v~  294 (345)
                      |+||.+++..  .....+++.++.. |   +++.
T Consensus        85 d~Vi~~a~~~n~~~~~~l~~aa~~~-g~v~~~v~  117 (346)
T 3i6i_A           85 DIVVSTVGGESILDQIALVKAMKAV-GTIKRFLP  117 (346)
T ss_dssp             CEEEECCCGGGGGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CEEEECCchhhHHHHHHHHHHHHHc-CCceEEee
Confidence            9999998852  1234555555543 4   6653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.40  E-value=0.1  Score=46.44  Aligned_cols=76  Identities=18%  Similarity=0.239  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+++|+|.|. +|..+++++...|+ +|+.+.+..                     .++.+.++     .+|+++.+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------~~L~~~~~-----~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT---------------------TDLKSHTT-----KADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SSHHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHhcc-----cCCEEEEC
Confidence            4789999999855 89999999999999 787774321                     23333332     58999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.+..+.  -+.++++ ..++.+|..
T Consensus       212 vg~p~~I~--~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          212 VGKPNFIT--ADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             CCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             CCCCCCCC--HHHcCCC-cEEEEeccc
Confidence            99765332  2567897 899999864

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=94.39  E-value=0.1  Score=46.31  Aligned_cols=76  Identities=25%  Similarity=0.277  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+++|+|.|. +|..+++++...|+ +|+.+.+..                     .++.+.++     .+|+++.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------~~L~~~~~-----~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------KDLSLYTR-----QADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCHHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHHhh-----cCCEEEEC
Confidence            4789999999854 89999999999999 788875431                     22333332     48999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.+..+.  -+.++++ ..++.+|..
T Consensus       211 vg~p~~I~--~~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          211 AGCVNLLR--SDMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             SSCTTCBC--GGGSCTT-EEEEECCCE
T ss_pred             CCCCCcCC--HHHcCCC-eEEEEeccC
Confidence            99765332  2567897 899999974

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=94.38  E-value=0.25  Score=45.24  Aligned_cols=97  Identities=16%  Similarity=0.199  Sum_probs=59.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH--HHHHhc-CCceE-eC-CCCCCccHHHHHHhhcCCCccEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNF-GVTEF-VN-PKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~--~~~~~~-g~~~~-i~-~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      +.+|+|+|+ |.+|...++.+...|+ +|++++++.++.  +.+... +...+ .| ..+     .+.+.+.. .++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d-----~~~l~~~~-~~~d~V   77 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN-----VPLMDTLF-EGAHLA   77 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC-----HHHHHHHH-TTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccCC-----HHHHHHHH-hcCCEE
Confidence            467999998 9999999988888898 888888876654  233332 32222 22 222     12233332 258999


Q ss_pred             EEccCCH-----HHHHHHHHHhccC--CeEEEEeccC
Q 019139          269 FECIGNV-----SVMRAALECCHKG--WGTSVIVGVA  298 (345)
Q Consensus       269 ~d~~g~~-----~~~~~~~~~l~~~--~G~~v~~G~~  298 (345)
                      |.+.+..     .....+++.++..  -+++|.+++.
T Consensus        78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            9776542     1224455555443  1588888764

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=94.36  E-value=0.025  Score=48.65  Aligned_cols=100  Identities=18%  Similarity=0.206  Sum_probs=63.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC---ceEeCCCCCCccHHHHHHhhcCCCccEE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~---~~~i~~~~~~~~~~~~~~~~~~gg~d~v  268 (345)
                      .+++.+||=+|+| .|..+..+++.... +|++++.+++-.+.+++...   ..+-...   .++.+....+..+.+|+|
T Consensus        58 ~~~~~~vLDiGcG-tG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~fD~V  132 (236)
T 1zx0_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTLPDGHFDGI  132 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGSCTTCEEEE
T ss_pred             CCCCCeEEEEecc-CCHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEe---cCHHHhhcccCCCceEEE
Confidence            4678899999986 36677777554333 89999999998888865321   1111111   233332223444589999


Q ss_pred             EE-ccC----CH------HHHHHHHHHhccCCeEEEEecc
Q 019139          269 FE-CIG----NV------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       269 ~d-~~g----~~------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +. +..    ..      ..+..+.+.|+|+ |+++++-.
T Consensus       133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~  171 (236)
T 1zx0_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCNL  171 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECCH
T ss_pred             EECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEec
Confidence            87 222    11      2267788999998 99987743

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=94.33  E-value=0.068  Score=53.11  Aligned_cols=79  Identities=20%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhHHH----HHHhcCCceEeCCCCCCccHHHHHHh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~---------~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      .|.++||+|+ +++|.+.+..+...|+ +|+++++         +.++.+    .++..+...+.|..+. .+..+.+.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~-~~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSV-IDGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCCG-GGHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCH-HHHHHHHHH
Confidence            4678999998 9999999999889999 8888765         333322    3344566666666552 333333333


Q ss_pred             hcC--CCccEEEEccCC
Q 019139          260 LTD--GGVDYSFECIGN  274 (345)
Q Consensus       260 ~~~--gg~d~v~d~~g~  274 (345)
                      ...  +++|++++++|.
T Consensus        96 ~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHHHCCCCcEEEECCCC
Confidence            322  379999999883

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.33  E-value=0.12  Score=45.10  Aligned_cols=100  Identities=12%  Similarity=0.029  Sum_probs=62.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHh-hcCCCcc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVD-LTDGGVD  266 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~-~~~gg~d  266 (345)
                      ..++.+||=+|+| .|..++.+|+.....+|++++.+++..+.+++    +|...+-...   .+..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G-~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~---~d~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTG-AGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALW---GRAEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCT-TTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE---CCHHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCC-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEE---CcHHHhhcccccCCCce
Confidence            3578889888885 36666777777643499999999998887753    4554321111   122211111 1124799


Q ss_pred             EEEEccC-C-HHHHHHHHHHhccCCeEEEEec
Q 019139          267 YSFECIG-N-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       267 ~v~d~~g-~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+...- . ...+..+.+.|+++ |+++.+-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            9986433 2 34466677889998 9988764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=94.32  E-value=0.36  Score=43.46  Aligned_cols=46  Identities=28%  Similarity=0.421  Sum_probs=37.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHHHhcCCc
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVT  241 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~--~~~~~~~~~~g~~  241 (345)
                      .+|.|+|.|.+|...++.+...|+++|++.+++  +++.+.+++.|+.
T Consensus        25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~   72 (312)
T 3qsg_A           25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVS   72 (312)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCE
Confidence            579999999999998888888887689999996  5777777776653

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=94.32  E-value=0.26  Score=41.65  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=62.1

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHhcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      ..++++++||=+|+| .|..+..+++..+..+|++++.+++..+    .+++...-..+. .+. .... ....+ .+.+
T Consensus        53 ~~~~~g~~VLDlGcG-tG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~-~d~-~~~~-~~~~~-~~~f  127 (210)
T 1nt2_A           53 LKLRGDERVLYLGAA-SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLL-FDA-SKPW-KYSGI-VEKV  127 (210)
T ss_dssp             CCCCSSCEEEEETCT-TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEEC-SCT-TCGG-GTTTT-CCCE
T ss_pred             cCCCCCCEEEEECCc-CCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEE-cCC-CCch-hhccc-ccce
Confidence            456889999999986 3778888888775348999999987433    333332111121 110 1110 00011 2479


Q ss_pred             cEEEEccCCHH----HHHHHHHHhccCCeEEEEe
Q 019139          266 DYSFECIGNVS----VMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       266 d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~  295 (345)
                      |+|+.....+.    .+..+.+.|+|+ |++++.
T Consensus       128 D~V~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~i~  160 (210)
T 1nt2_A          128 DLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  160 (210)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEeccChhHHHHHHHHHHHHhCCC-CEEEEE
Confidence            99987655332    257778899998 999887

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=94.31  E-value=0.083  Score=47.95  Aligned_cols=69  Identities=29%  Similarity=0.347  Sum_probs=45.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ..+.+|||+|+ |.+|...++.+...|+ +|++++++..+      .+...+ .|..+     .+.+.+... ++|+||.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~d-----~~~~~~~~~-~~d~vih   83 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLED-----GQALSDAIM-GVSAVLH   83 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTTC-----HHHHHHHHT-TCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcCC-----HHHHHHHHh-CCCEEEE
Confidence            45678999998 9999999999999999 89998887654      233322 22222     122333322 7999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      +.+.
T Consensus        84 ~A~~   87 (347)
T 4id9_A           84 LGAF   87 (347)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8763

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=94.31  E-value=0.11  Score=49.53  Aligned_cols=79  Identities=25%  Similarity=0.367  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH---HHHHhcCCceE-eCCCCCCccHHHHHHh---hcCCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF---DRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~---~~~~~~g~~~~-i~~~~~~~~~~~~~~~---~~~gg~  265 (345)
                      ++.++||+|+ |++|...+..+...|+ +|+.+++++...   +..++.+...+ .|..+ .+...+.+.+   ..++.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTA-DDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTS-TTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHHcCCCc
Confidence            5679999987 9999998888888899 888887754332   23344555432 23333 2333333332   233359


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999884

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.30  E-value=0.12  Score=51.14  Aligned_cols=79  Identities=18%  Similarity=0.161  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hHHH----HHHhcCCceEeCCCCCCccHHHHHHh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD----RAKNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~---------~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      .+.+++|+|+ +++|.+.++.+...|+ +|++.+++.         ++.+    .++..|...+.|..+. .+..+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~-~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV-LDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCT-TCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCH-HHHHHHHHH
Confidence            4678899998 9999999999999999 888887643         2222    2234455555555542 222222222


Q ss_pred             hc--CCCccEEEEccCC
Q 019139          260 LT--DGGVDYSFECIGN  274 (345)
Q Consensus       260 ~~--~gg~d~v~d~~g~  274 (345)
                      ..  .|.+|+++++.|-
T Consensus        85 ~~~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  2479999999883

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=94.30  E-value=0.098  Score=45.21  Aligned_cols=104  Identities=15%  Similarity=0.210  Sum_probs=67.1

Q ss_pred             hHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC--ceEeCCCCCCccHHHHHHhh
Q 019139          183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       183 ~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~--~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +..+.......++.+||-+|+|. |..+..+++. |..++++++.+++..+.+++...  ...+...+    +.+ + .+
T Consensus        33 ~~~l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d----~~~-~-~~  104 (253)
T 3g5l_A           33 WHELKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKA----IED-I-AI  104 (253)
T ss_dssp             HHHHHTTCCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECC----GGG-C-CC
T ss_pred             HHHHHHhhhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcc----hhh-C-CC
Confidence            33444555566889999999864 6777777776 54489999999998888876432  11111111    100 0 12


Q ss_pred             cCCCccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139          261 TDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       261 ~~gg~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..+.+|+|+....     . ...+..+.+.|+++ |++++.
T Consensus       105 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~  144 (253)
T 3g5l_A          105 EPDAYNVVLSSLALHYIASFDDICKKVYINLKSS-GSFIFS  144 (253)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC-cEEEEE
Confidence            2348999986532     1 34578888899998 998875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.30  E-value=0.076  Score=48.48  Aligned_cols=74  Identities=20%  Similarity=0.205  Sum_probs=47.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-Hhc----CCceE-eCCCCCCccHHHHHHhhcCC-Ccc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTEF-VNPKDHDKPIQQVLVDLTDG-GVD  266 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~----g~~~~-i~~~~~~~~~~~~~~~~~~g-g~d  266 (345)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++..+.+.+ +.+    +...+ .|..+     .+.+.++..+ ++|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~~~~~~d   82 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-----QNKLLESIREFQPE   82 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-----HHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC-----HHHHHHHHHhcCCC
Confidence            568999998 9999999999999999 899988876543222 211    12111 12222     1223333333 689


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +||.+++.
T Consensus        83 ~vih~A~~   90 (357)
T 1rkx_A           83 IVFHMAAQ   90 (357)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999883

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=94.23  E-value=0.13  Score=48.63  Aligned_cols=103  Identities=18%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      .....+++++||=.|+|+ |..+.++++..+...|++++.++.+.+.+++    +|....+...+ ..++..   .+..+
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D-~~~~~~---~~~~~  314 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD-GRYPSQ---WCGEQ  314 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC-TTCTHH---HHTTC
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCc-hhhchh---hcccC
Confidence            344578899999998865 7777788887753489999999988877643    45432221111 112211   12234


Q ss_pred             CccEEEE---ccCC-------------------------HHHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFE---CIGN-------------------------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|.|+-   |+|.                         ...+..+.+.|+++ |+++..-
T Consensus       315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvyst  374 (429)
T 1sqg_A          315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYAT  374 (429)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEE
Confidence            7998885   4442                         13467778889997 9988754

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.23  E-value=0.075  Score=50.68  Aligned_cols=104  Identities=14%  Similarity=0.223  Sum_probs=66.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      ....++++++||-.|+|+ |..+.+++..++. ..|++++.++.+.+.+++    +|...+.....+..++.   ..+..
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~---~~~~~  328 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP---EIIGE  328 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS---SSSCS
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc---hhhcc
Confidence            344678899999888865 7777788887642 489999999998877653    46533211111001110   01222


Q ss_pred             CCccEEEE---ccCC-------------------------HHHHHHHHHHhccCCeEEEEec
Q 019139          263 GGVDYSFE---CIGN-------------------------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       263 gg~d~v~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +.+|.|+-   |+|.                         ...+..+.+.|+++ |+++..-
T Consensus       329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~t  389 (450)
T 2yxl_A          329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTT  389 (450)
T ss_dssp             SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            47998884   4342                         23477788889997 9998653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.21  E-value=0.11  Score=49.00  Aligned_cols=84  Identities=17%  Similarity=0.194  Sum_probs=49.7

Q ss_pred             hcCCCCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh---------------H-HHHHHhcCCceEe---CC
Q 019139          189 TAKVEPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPK---------------K-FDRAKNFGVTEFV---NP  246 (345)
Q Consensus       189 ~~~~~~g~~VlI~Ga-g~vG~~--a~q~a~~~G~~~vi~~~~~~~---------------~-~~~~~~~g~~~~i---~~  246 (345)
                      ......+.++||+|+ +++|.+  .+......|+ +|+.+.++..               . .+.+++.|.....   |.
T Consensus        54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv  132 (418)
T 4eue_A           54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA  132 (418)
T ss_dssp             SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence            344577899999998 999998  4444444599 8888776432               1 2234555654322   33


Q ss_pred             CCCCccHHHHHHhhc--CCCccEEEEccCC
Q 019139          247 KDHDKPIQQVLVDLT--DGGVDYSFECIGN  274 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~--~gg~d~v~d~~g~  274 (345)
                      .+ +++..+.+....  .|++|+++.++|.
T Consensus       133 td-~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          133 FS-NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             TC-HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CC-HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            32 122222232222  2589999999886

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.20  E-value=0.17  Score=44.95  Aligned_cols=96  Identities=21%  Similarity=0.240  Sum_probs=58.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHH--HHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKF--DRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G-~~~vi~~~~~~~~~--~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      ..+|+|+|+ |.+|...++.+...| + +|++++++.++.  +.+...+.+.+. |..+     .+.+.+... ++|++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d-----~~~l~~~~~-~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD-----QVIMELALN-GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC-----HHHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC-----HHHHHHHHh-cCCEEE
Confidence            468999998 999999998888888 7 899998876653  233344554322 2322     123333332 589999


Q ss_pred             EccCCHH---------HHHHHHHHhcc-CCeEEEEecc
Q 019139          270 ECIGNVS---------VMRAALECCHK-GWGTSVIVGV  297 (345)
Q Consensus       270 d~~g~~~---------~~~~~~~~l~~-~~G~~v~~G~  297 (345)
                      .+.+...         ....+++.++. +-++++..+.
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           78 IVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             ECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             EeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            9887321         12344444433 2257777554

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=94.20  E-value=0.26  Score=42.08  Aligned_cols=102  Identities=20%  Similarity=0.228  Sum_probs=63.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhH----HHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~----~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +...++++++||-+|+|. |..+..+++..| ..+|++++.+++.    .+.++....-.++..+-  .+.. . .....
T Consensus        71 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~--~~~~-~-~~~~~  145 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA--RHPH-K-YRMLI  145 (233)
T ss_dssp             SCCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT--TCGG-G-GGGGC
T ss_pred             heecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc--CChh-h-hcccC
Confidence            345678899999999975 888888888864 2389999999653    34444432111222111  1100 0 11223


Q ss_pred             CCccEEEEccCCHH----HHHHHHHHhccCCeEEEEe
Q 019139          263 GGVDYSFECIGNVS----VMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       263 gg~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~  295 (345)
                      +.+|+|+.....+.    .+..+.+.|+++ |++++.
T Consensus       146 ~~~D~V~~~~~~~~~~~~~~~~~~~~Lkpg-G~l~i~  181 (233)
T 2ipx_A          146 AMVDVIFADVAQPDQTRIVALNAHTFLRNG-GHFVIS  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CcEEEEEEcCCCccHHHHHHHHHHHHcCCC-eEEEEE
Confidence            47999987655431    255688899997 988873

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=94.19  E-value=0.067  Score=47.22  Aligned_cols=92  Identities=18%  Similarity=0.286  Sum_probs=58.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      .+|||+|+|.+|...+..+...|+ +|++++++.++.    .-+...+ .|..+  .+   .+.++..+.+|+||.+++.
T Consensus         4 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~~~~~~~Dl~d--~~---~~~~~~~~~~d~vih~a~~   73 (286)
T 3gpi_A            4 SKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQPM----PAGVQTLIADVTR--PD---TLASIVHLRPEILVYCVAA   73 (286)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSCC----CTTCCEEECCTTC--GG---GCTTGGGGCCSEEEECHHH
T ss_pred             CcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcccc----ccCCceEEccCCC--hH---HHHHhhcCCCCEEEEeCCC
Confidence            579999999999999999999999 899998876652    1222222 12222  11   1222333359999998863


Q ss_pred             H------------HHHHHHHHHhccC-CeEEEEecc
Q 019139          275 V------------SVMRAALECCHKG-WGTSVIVGV  297 (345)
Q Consensus       275 ~------------~~~~~~~~~l~~~-~G~~v~~G~  297 (345)
                      .            .....+++.++.. .++++.+++
T Consensus        74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           74 SEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             HHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence            2            1244556666543 147887765

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=94.19  E-value=0.33  Score=41.47  Aligned_cols=96  Identities=9%  Similarity=0.030  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      ....+++|.|+|.+|...++.+...|.  |+++++++++.+.++ .+.. ++.-+-  .+ .+.+.+..-.++|.++-++
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~--~~-~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDP--TR-VSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCT--TC-HHHHHHTTCTTCSEEEECC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCC--CC-HHHHHhcCcchhcEEEEcC
Confidence            456789999999999998888888786  888899988887776 5643 332211  11 2333333223799999998


Q ss_pred             CCHHH---HHHHHHHhccCCeEEEEec
Q 019139          273 GNVSV---MRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       273 g~~~~---~~~~~~~l~~~~G~~v~~G  296 (345)
                      ++...   +....+.+.+. .+++..-
T Consensus        80 ~~d~~n~~~~~~a~~~~~~-~~iia~~  105 (234)
T 2aef_A           80 ESDSETIHCILGIRKIDES-VRIIAEA  105 (234)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEEC
T ss_pred             CCcHHHHHHHHHHHHHCCC-CeEEEEE
Confidence            87542   22333445554 5666554

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=94.14  E-value=0.23  Score=46.46  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=69.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      +.....++++.+||=+|+|. |.++..+++ .|. ++++++.+++..+.+++.+.......-.  .+..+.+. ...+.+
T Consensus        99 l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~--~~~~~~l~-~~~~~f  172 (416)
T 4e2x_A           99 FLATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE--KATADDVR-RTEGPA  172 (416)
T ss_dssp             HHHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS--HHHHHHHH-HHHCCE
T ss_pred             HHHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec--hhhHhhcc-cCCCCE
Confidence            34555677889999999864 556666665 577 9999999999999998877654433221  11222221 223589


Q ss_pred             cEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139          266 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       266 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      |+|+..-.     . ...+..+.+.|+++ |++++.
T Consensus       173 D~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          173 NVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            99986432     2 24578888999997 998875

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.13  E-value=0.14  Score=45.19  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=57.4

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag-~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+++|+|.| .+|..+++++...|+ +|+++.+..                     .++.+.+++     +|++|.+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t---------------------~~L~~~~~~-----ADIVI~A  200 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT---------------------KDIGSMTRS-----SKIVVVA  200 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCHHHHHHH-----SSEEEEC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc---------------------ccHHHhhcc-----CCEEEEC
Confidence            679999999985 589999999999999 888875421                     234444443     7999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus       201 vg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          201 VGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             SSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             CCCCccccH--hhccCC-cEEEEeccC
Confidence            998653332  457897 899999874

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=94.10  E-value=0.04  Score=51.23  Aligned_cols=112  Identities=20%  Similarity=0.165  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----h--------HHHHHHhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----K--------KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~----~--------~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +..+|+|.|+|..|..+++++..+|+++|+.+|++-    .        +..+++..      +......++.+.+.   
T Consensus       187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~------~~~~~~~~L~eav~---  257 (398)
T 2a9f_A          187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVT------NREFKSGTLEDALE---  257 (398)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHH------SCTTCCCSCSHHHH---
T ss_pred             CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhcc------CcccchhhHHHHhc---
Confidence            457899999999999999999999999999998851    1        11122111      00000122333333   


Q ss_pred             CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                        +.|++|-+++....-+.+++.|+++ ..++.+..+.    -++.+.+... +..|.++-
T Consensus       258 --~ADV~IG~Sapgl~T~EmVk~Ma~~-pIIfalsNPt----~E~~pe~a~~~g~~i~atG  311 (398)
T 2a9f_A          258 --GADIFIGVSAPGVLKAEWISKMAAR-PVIFAMANPI----PEIYPDEALEAGAYIVGTG  311 (398)
T ss_dssp             --TTCSEEECCSTTCCCHHHHHTSCSS-CEEEECCSSS----CSSCHHHHHTTTCSEEEES
T ss_pred             --cCCEEEecCCCCCCCHHHHHhhCCC-CEEEECCCCC----ccCCHHHHHHhCCeEEEeC
Confidence              4799998877433347788999997 8888887643    3778888777 66676663

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=94.07  E-value=0.1  Score=45.65  Aligned_cols=78  Identities=18%  Similarity=0.101  Sum_probs=47.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~-~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +.++||+|+ |++|...++.+...|+ +|++ ..++.++.+.+    ++.+....+   |..+ .+++.+.+.+..  .+
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            578999998 9999999999999999 6755 45555443322    233433222   2322 122222222221  24


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.07  E-value=0.18  Score=44.81  Aligned_cols=92  Identities=16%  Similarity=0.180  Sum_probs=55.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHHH---hcCCceE-eCCCCCCccHHHHHHhhcCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRAK---NFGVTEF-VNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~------~~~~~~~---~~g~~~~-i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ..+|+|+|+ |.+|...+..+...|+ +|++++++.      ++.+.++   ..++..+ .|..+     .+.+.+... 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d-----~~~l~~~~~-   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD-----HASLVEAVK-   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC-----HHHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC-----HHHHHHHHc-
Confidence            357999998 9999999999999998 888888863      3333332   3354322 12222     122222222 


Q ss_pred             CccEEEEccCCHH--HHHHHHHHhccC--CeEEE
Q 019139          264 GVDYSFECIGNVS--VMRAALECCHKG--WGTSV  293 (345)
Q Consensus       264 g~d~v~d~~g~~~--~~~~~~~~l~~~--~G~~v  293 (345)
                      ++|+||.+++...  ....+++.++..  -.+++
T Consensus        77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            5999999987531  123444444432  14776

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.05  E-value=0.15  Score=52.16  Aligned_cols=82  Identities=17%  Similarity=0.249  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh-------HHHHHHhcCCceEe---CCCCCCccHHHHHHh
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPK-------KFDRAKNFGVTEFV---NPKDHDKPIQQVLVD  259 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~-~~G~~~vi~~~~~~~-------~~~~~~~~g~~~~i---~~~~~~~~~~~~~~~  259 (345)
                      ++++.+++|+|+ |++|...++.+. ..|+++++.+.++..       ..+.++..|....+   |..+ .++..+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd-~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVAD-RETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHH
Confidence            467889999988 999999888776 789967888888722       12334456765433   3322 2334444444


Q ss_pred             hcCC-CccEEEEccCC
Q 019139          260 LTDG-GVDYSFECIGN  274 (345)
Q Consensus       260 ~~~g-g~d~v~d~~g~  274 (345)
                      .... ++|+++++.|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            4333 79999999884

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.03  E-value=0.15  Score=45.61  Aligned_cols=78  Identities=23%  Similarity=0.271  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~-vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+++|+|.|. +|..+++++...|+ +|+++.+....++                   +.+.++     .+|+++.+
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~-------------------l~~~~~-----~ADIVI~A  217 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED-------------------MIDYLR-----TADIVIAA  217 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH-------------------HHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch-------------------hhhhhc-----cCCEEEEC
Confidence            4789999999855 89999999999999 8888765322111                   002222     48999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus       218 vg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          218 MGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             SCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             CCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            997653322  457887 888999863

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=94.03  E-value=0.21  Score=44.53  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=37.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++..+.      + ....|..+ ...+.+.+...   ++|+||.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d-~~~~~~~~~~~---~~d~vih~A~   69 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD-SNAVHHIIHDF---QPHVIVHCAA   69 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------CHHHHHHH---CCSEEEECC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC-HHHHHHHHHhh---CCCEEEECCc
Confidence            468999998 9999999999888998 899988765431      1 11122222 12222233221   6899999887


Q ss_pred             C
Q 019139          274 N  274 (345)
Q Consensus       274 ~  274 (345)
                      .
T Consensus        70 ~   70 (315)
T 2ydy_A           70 E   70 (315)
T ss_dssp             -
T ss_pred             c
Confidence            4

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=94.01  E-value=0.05  Score=47.89  Aligned_cols=97  Identities=18%  Similarity=0.295  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAA---GASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~---G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +++|.+||=+|+| .|..+..+++..   |+ +|++++.+++-++.+++    .+...-+....  .+    +.++..+.
T Consensus        68 ~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~--~D----~~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCS-LGAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GD----IRDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCT-TTHHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SC----TTTCCCCS
T ss_pred             CCCCCEEEEEeCC-CCHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee--cc----cccccccc
Confidence            6899999999996 477778888764   56 89999999988777754    33321111110  01    11222346


Q ss_pred             ccEEEEccC----C----HHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIG----N----VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+|+-...    .    ...+..+.+.|+|| |++++.-.
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            888875432    1    13478888999998 99988643

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=94.01  E-value=0.15  Score=45.07  Aligned_cols=84  Identities=19%  Similarity=0.126  Sum_probs=52.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|.|+|+|.+|...+..+.. |+ +|+++++++++.+.+.+.|.... ..    .+       .. ...|+||.++..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~~----~~-------~~-~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-VP----LE-------RV-AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-CC----GG-------GG-GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-CH----HH-------HH-hCCCEEEEeCCChH
Confidence            58899999999987777777 98 79999998888777765554321 11    11       10 14677777777654


Q ss_pred             HHHHHHH----HhccCCeEEEEec
Q 019139          277 VMRAALE----CCHKGWGTSVIVG  296 (345)
Q Consensus       277 ~~~~~~~----~l~~~~G~~v~~G  296 (345)
                      .+...++    .++++ ..++.++
T Consensus        68 ~~~~v~~~l~~~l~~~-~~vv~~s   90 (289)
T 2cvz_A           68 EVYEVAEALYPYLREG-TYWVDAT   90 (289)
T ss_dssp             HHHHHHHHHTTTCCTT-EEEEECS
T ss_pred             HHHHHHHHHHhhCCCC-CEEEECC
Confidence            3444333    23443 4444443

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=94.00  E-value=0.12  Score=46.85  Aligned_cols=99  Identities=17%  Similarity=0.083  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-------eEeCCCCCCccHHHHHHhhcCCCc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-------~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      .++.+||.+|+|. |..+..+++..+..+|++++.+++-.+.+++.-..       .-+....  .+..+.+.. ..+.+
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~--~D~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--EDASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHHHHH-CCSCE
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE--ccHHHHHhh-cCCCc
Confidence            3568999998753 66677777765545999999999998888763211       0011111  233333332 23489


Q ss_pred             cEEEEccC----------CHHHHHHHHHHhccCCeEEEEec
Q 019139          266 DYSFECIG----------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       266 d~v~d~~g----------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+|+-...          ....++.+.+.|+++ |.+++-.
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            98884331          145578888999998 9998753

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=93.99  E-value=0.19  Score=43.43  Aligned_cols=96  Identities=20%  Similarity=0.178  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC----CceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      ..+.++.+||-+|+|. |..+..+++. +. ++++++.+++..+.+++.-    ....+...+. .++     .+..+.+
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-----~~~~~~f  105 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAI-----PLPDESV  105 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSC-----CSCTTCE
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccC-----CCCCCCe
Confidence            3567889999999864 6777777765 76 8999999999888886541    1111111110 111     1223479


Q ss_pred             cEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139          266 DYSFECIG-----N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       266 d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      |+|+....     . ...+..+.+.|+++ |++++.
T Consensus       106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~  140 (263)
T 2yqz_A          106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPG-GALLEG  140 (263)
T ss_dssp             EEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEECCchhhcCCHHHHHHHHHHHCCCC-cEEEEE
Confidence            99987533     1 34578888999998 998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	345
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-51
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-50
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-48
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-45
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	8e-45
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-44
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	9e-44
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	6e-43
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-41
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-41
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	5e-36
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	2e-32
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	7e-32
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-23
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	7e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-22
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-21
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-19
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	3e-17
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	4e-17
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	9e-17
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-15
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	5e-14
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	9e-14
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-13
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	6e-12
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-11
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	1e-09
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-08
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	2e-07
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	7e-07
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-06
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	1e-05
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	9e-05
d1mv8a2	202	c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pse	3e-04
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-04
d1bg6a2	184	c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvalin	6e-04
d1dlja2	196	c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGD	7e-04
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-04
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	0.001

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  166 bits (421), Expect = 2e-51
 Identities = 92/175 (52%), Positives = 118/175 (67%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           AP +KVCL+GCG  TG GA   T KV+PGS   VFGLG VGL+V  G K+AGASR+IGID
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           ++  KF++A   G TE ++PKD  KPI +VL ++T   V Y+FE IG++  M  AL  CH
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
             +GTSV+VGV  S + ++  P  L TGR WKG  FGG KSR  VP LV +++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  165 bits (418), Expect = 1e-50
 Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 1/200 (0%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +T G+VI CKAAVAWE NKPLVIE+++V  P A E+RIKI+ T +CHTD Y       + 
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
            FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K   A  
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW-ANE 119

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
           +  +M+ +++RF+  G+ +  F+GTSTFSQYTVV+ ++VAKIDP   LD+       + +
Sbjct: 120 SPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLES 179

Query: 182 GLGAVWNTAKVEPGSIVAVF 201
              A+      +    V   
Sbjct: 180 VNDAIDLMKHGKCIRTVLSL 199

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  159 bits (403), Expect = 2e-48
 Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 1/196 (0%)

Query: 5   GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP 64
            +VI CKAAVAWE  KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61

Query: 65  CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
            ILGH  AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G 
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG- 120

Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
           +M D  SRF+  GK I H+MGTSTFS+YTVV D+SVAKIDP   +D+             
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 185 AVWNTAKVEPGSIVAV 200
           A       +    V  
Sbjct: 181 AFELMHSGKSIRTVVK 196

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  151 bits (381), Expect = 2e-45
 Identities = 90/175 (51%), Positives = 116/175 (66%), Gaps = 2/175 (1%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           APL+  CL+GCG  TG GA  NTAKV PGS  AVFGLG VG +   G KAAGASR+IG+ 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
               KF +A   G TE +NPKD+DKPI +V+ + T+GGVDY+ EC G +  M  AL+  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            G G +V++G+A+  + +   P  L+TGR  KG+ FGGFK   +V  LVD YMKK
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  150 bits (379), Expect = 8e-45
 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 12/208 (5%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T G+ ITCKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+       P   
Sbjct: 2   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK- 60

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FP ILGHEA G+VES+G GVT V+PGD VIP +  +C  C+ CKS  +N C K       
Sbjct: 61  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK- 119

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
             +M D  SRF+  GKPIY+ MGTSTF++YTVV D++VAKIDP+  ++ +      +   
Sbjct: 120 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL--- 176

Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAV 210
                   ++     +   G G   + +
Sbjct: 177 -------DQINKAFELLSSGQGVRSIMI 197

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  149 bits (377), Expect = 1e-44
 Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 7/201 (3%)

Query: 3   TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
           T+G+VI CKAA+AW+   PL IE+++V+PP+A EVRI+++ T +C TD         + L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATD-PKKKAL 60

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           FP +LGHE AGIVESVG GVT  +PGD VIP +  +C+ CK C S  TNLCGK+R     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 123 GV---MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
            +   +M DR SRF+  G+ IYHFMG S+FSQYTVV + ++A++D +  LD +       
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180

Query: 180 PTGLGAVWNTAKVEPGSIVAV 200
            +   A+     ++ G  +  
Sbjct: 181 ESINDAI---DLMKEGKSIRT 198

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  147 bits (370), Expect = 9e-44
 Identities = 86/175 (49%), Positives = 114/175 (65%), Gaps = 2/175 (1%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           A L++VCL+GCG  +G GA  NTAKV PGS  AVFGLG VGL+   G K AGASR+I ID
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           I+ +KF +AK  G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    ++AA++C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
            GWG+  +VG      E++     ++ GR   GT FGG+KS   VP LV  Y  K
Sbjct: 121 LGWGSCTVVGA--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  145 bits (366), Expect = 6e-43
 Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 5/201 (2%)

Query: 2   STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           ST G+VI CKAAV WE  KP  IE+V+VAPP+A EVRIK++ T +C +D +  SG     
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
             P I GHEAAGIVES+GEGVT V+PGD VIP +  +C +C+ CK  + N C K   +  
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
            G M  D  SRF+  GKPI+HF+GTSTFSQYTVV ++SVAKID    LD    L   V  
Sbjct: 120 RGTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD---PLITHVLP 175

Query: 182 GLGAVWNTAKVEPGSIVAVFG 202
                     +  G  +    
Sbjct: 176 FEKINEGFDLLRSGESIRTIL 196

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  141 bits (356), Expect = 1e-41
 Identities = 97/175 (55%), Positives = 123/175 (70%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           +PL+KVCL+GCG  TG G+    AKV  GS  AVFGLG VGL+V  G KAAGA+R+IG+D
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           I+  KF +AK  G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC 
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           + +G SVIVGV    Q +S  P  L++GR WKG  FGGFKS+  VP LV  +M K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  140 bits (352), Expect = 4e-41
 Identities = 130/175 (74%), Positives = 147/175 (84%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           APLDKVCLLGCG+ TG GA  NTAK+EPGS+ AVFGLG VGLAV  G K AGASR+IG+D
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           I+  KF RAK FG TE +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CH
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           KGWG SV+VGVAASG+EI+TRPFQLVTGR WKGTAFGG+KS   VP LV +YM K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  126 bits (317), Expect = 5e-36
 Identities = 107/175 (61%), Positives = 129/175 (73%), Gaps = 1/175 (0%)

Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
           APLD VCLLGCGV TG GA  NTAKVEPGS  AVFGLG VGLA   G  +AGA R+I +D
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           ++P KF++AK FG T+FVNP DH +PI QVL  +T+GGVD+S EC+GNV VMR ALE C 
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKK 341
           KGWG SV+VG      +++TRP QL+ GR WKG+ FGGFK +  VP +V  Y+ K
Sbjct: 121 KGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  117 bits (294), Expect = 2e-32
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 5/194 (2%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
              AAV         ++ +++  PQ  EV +K++ T +CHTD      K P    P +LG
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 61

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           HE +GI+E++G  VTE+Q GDHV+  Y   C +C  C +G    C +  G   +G     
Sbjct: 62  HEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 120

Query: 129 RKSRFSINGK--PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                  + +     HF   S+F+ Y +  + +  K+    P D++            A+
Sbjct: 121 N-HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179

Query: 187 WNTAKVEPGSIVAV 200
            +   +    I+ +
Sbjct: 180 DSRKGITLKPIIKI 193

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  115 bits (289), Expect = 7e-32
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 4/174 (2%)

Query: 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227
           P++ +  LGCG+ TG GA  N  KV P S    +G G VGL+    AK  GAS +I +DI
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
              + + AK  G T  +N K  D      + ++TDGGV+++ E  G+  +++        
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQG-VDALG 118

Query: 288 GWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMK 340
             G   +VG    G         L+  G+   G   G    +  +P LV  Y +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 93.1 bits (230), Expect = 2e-23
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 16/177 (9%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           KA  A+   +PL   D+    P   +V+I+I +  +CH+D +    +    ++PC+ GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 71  AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
             G V +VG+ V +  PGD V + C    C+ C+ C+ G  N C  + G T         
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG-TYNSPT---- 116

Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGA 185
                    P         +SQ  VVH+  V +I      + +   +       L  
Sbjct: 117 ---------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 91.8 bits (227), Expect = 7e-23
 Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 26/200 (13%)

Query: 8   ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
           +   A V  + N+PLV ++ +++    G + ++IL   +C +D + + G+DP    P IL
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 68  GHEAAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
           GHE AG V  V     ++          ++      C EC +CK  K       R   G 
Sbjct: 63  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG- 121

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
              +N   S +        H  G   +S + V+  +  V K+  +        L      
Sbjct: 122 ---INRGCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN-- 165

Query: 182 GLGAVWNTAKVEPGSIVAVF 201
                    +      V ++
Sbjct: 166 ---KALELMESREALKVILY 182

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.0 bits (222), Expect = 3e-22
 Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 30/196 (15%)

Query: 9   TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
           T KAAV      PL IE+V+V  P  G+V +KI  + +CHTD +   G  P +   P I 
Sbjct: 5   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64

Query: 68  GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           GHE  G V +VG GVT V+ GD V IP     C  C+ C +G   LC             
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC------------- 111

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                      +    +     +++Y +     V  +    P +    +  G    +  +
Sbjct: 112 ---------ESQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQI 158

Query: 187 WNTAK--VEPGSIVAV 200
            +  +     G IV  
Sbjct: 159 LDQMRAGQIEGRIVLE 174

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.4 bits (218), Expect = 2e-21
 Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 20/196 (10%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPP--QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
           +             +  +  P      ++ IKI    +C +D +  +G       P ++G
Sbjct: 8   EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVG 67

Query: 69  HEAAGIVESVGEGVTE-VQPGDH-VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           HE  G V  +G      ++ G    +      C EC  CK+     C             
Sbjct: 68  HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC------------- 114

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
              K   + +      ++    ++ Y  VH+  V  I     ++ + +   GV      +
Sbjct: 115 --TKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM 172

Query: 187 WNTAKVEPGSIVAVFG 202
                V     +  + 
Sbjct: 173 -EKGDVRYRFTLVGYD 187

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 81.9 bits (201), Expect = 2e-19
 Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 8/172 (4%)

Query: 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227
           PL+   ++   + TG       A +E GS V V G+G VGL    GAK  GA R+IG+  
Sbjct: 2   PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
            P   + AK +G T+ +N   +     QV+      GVD      G    +  A++    
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 288 GWGTSVIVGVAASGQEISTRPFQLVTG---RVWKGTAFGGFKSRSQVPWLVD 336
           G G    +    SG  +     +   G   +  KG    G   R +   L D
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--GRLRAERLRD 168

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 76.5 bits (187), Expect = 3e-17
 Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 31/185 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-------- 62
           +A    E  KPL ++++ V  P+  +V IK+    +CH+D +   G+             
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 63  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
            P  LGHE AG +E VG+ V     GD V          C +C+ G+ +LC   R     
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR----- 116

Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT 181
                                     +++Y +V     + K+    P+    +       
Sbjct: 117 -----------------WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 182 GLGAV 186
            +  +
Sbjct: 160 AIDNL 164

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 76.2 bits (186), Expect = 4e-17
 Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 26/194 (13%)

Query: 12  AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLFPCILG 68
           +AV ++ N  L +E   +  P+  EV +++ +  +C +D + +      D     P ++G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 69  HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           HEA+G V  VG+ V  ++ GD V       CR C+FCK GK NLC               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 107

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
                  +             ++Y V       K+     + ++      +   + A   
Sbjct: 108 ------PDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-E 160

Query: 189 TAKVEPGSIVAVFG 202
            A+ +  + + V  
Sbjct: 161 AARKKADNTIKVMI 174

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 75.7 bits (185), Expect = 9e-17
 Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 28/218 (12%)

Query: 11  KAAVAWEPNKPLVIEDVQV-------APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF 63
           +  V     K + ++ +                V +K++ T +C +D +   G       
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQV 60

Query: 64  PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
             +LGHE  G V   G  V  +Q GD V   +   C  C+ CK   T +C  V  A   G
Sbjct: 61  GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 120

Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPT 181
                    ++               ++Y +V   D ++ K+  +    +   +   V  
Sbjct: 121 AYGYVDMGDWTG------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGV 168

Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 219
            + ++ + A    G     F  G     V +  K   A
Sbjct: 169 QVISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 69.6 bits (169), Expect = 6e-15
 Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 32/196 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL-GH 69
           KAAV  +  +PL I++V+      GEV ++I    +CHTD +   G  P      ++ GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 70  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
           E  GIVE VG GVT ++ GD V IP   + C  C +C SG+  LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------- 106

Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPTGLGAV 186
                    +    +     +++Y       V KI     ++   L  +       L   
Sbjct: 107 -------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQ 159

Query: 187 WNTAKVEPGSIVAVFG 202
                   G +V    
Sbjct: 160 I------NGRVVLTLE 169

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 67.3 bits (163), Expect = 5e-14
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 6/159 (3%)

Query: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228
           LD + +  C   T   A     +   G  V + G G +GL     A++ GA  VI I   
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 229 PKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
           P +   A+  G    +N ++   ++  + ++      G D+  E  G+   +    E   
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 287 KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325
           +G G   + GVA     +  + ++ +   V K   F G 
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWL---VLKNATFKGI 157

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 9e-14
 Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 28/193 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 67
            + V   P   L +E+  +  P   EV +++    +C +D + W            P +L
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 68  GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
           GHEA+G VE VG  V  ++PGD V     A     +FCK G+ NL   +          N
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
                                  ++   +     K+                       +
Sbjct: 128 ---------------------LCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAF 163

Query: 188 NTAKVEPGSIVAV 200
            T K   G  + +
Sbjct: 164 ETFKKGLGLKIML 176

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 65.5 bits (158), Expect = 2e-13
 Identities = 47/194 (24%), Positives = 68/194 (35%), Gaps = 28/194 (14%)

Query: 11  KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP---CI 66
           KAA   E NKPL IEDV         +V ++I    +CHTD +   G   E L P     
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
           LGHE  G +E V EGV  ++ GD VI         C  C++G+   C  +          
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLE--------- 111

Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
                                 F+++      SV K+     ++        +   L  +
Sbjct: 112 -------------FPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158

Query: 187 WNTAKVEPGSIVAV 200
                   G  V +
Sbjct: 159 EKGEV--LGRAVLI 170

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 61.8 bits (149), Expect = 6e-12
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 18/159 (11%)

Query: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228
           +  +  L   +PTG       A V PGS V V G G VGLA A  A+  GA+ VI  D++
Sbjct: 1   IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 229 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--------------- 273
           P +   AK  G        D     +Q+   L +  VD + + +G               
Sbjct: 60  PARLAHAKAQGFEIADLSLDTP-LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118

Query: 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV 312
             +V+ + ++      G   I G+  +    +      +
Sbjct: 119 PATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI 156

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 33/203 (16%)

Query: 11  KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
           K       NK L   + +     + +  ++ L  + C +D +T            ILGHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 71  AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
           A G V  VG  V + +PGD VI             ++G                      
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNG--------------- 105

Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
               +     +       F +Y  V+  D+++A +     L K+         G   +  
Sbjct: 106 ----MLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHIEE 158

Query: 189 TAKVEPGSIVAVFGLGTVGLAVA 211
                    + +       L  A
Sbjct: 159 A--------LLLMKDKPKDLIKA 173

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.2 bits (142), Expect = 3e-11
 Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 11/168 (6%)

Query: 175 LGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
           L     T   AV   A+ + PG+ VA+ G+G +G    +  K    + VI +D+  +K  
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV 293
            A+  G    V+ +    P++QV+      GV+ + + +G+ + +        +  G  +
Sbjct: 72  LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128

Query: 294 IVGVAASGQEISTRPFQLVTGRV-WKGTAFGGFKSRSQVPWLVDKYMK 340
           IVG    G E+     ++++  V ++G+  G   +  ++  LV   ++
Sbjct: 129 IVGY---GGELRFPTIRVISSEVSFEGSLVG---NYVELHELVTLALQ 170

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 32/157 (20%), Positives = 55/157 (35%), Gaps = 8/157 (5%)

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
            G+ A      V  G  V V G G +G+     AKA GA++V+  D+   +  +AK  G 
Sbjct: 14  VGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA 72

Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299
              +             V+   G   + + EC G  + ++A +     G     +V V  
Sbjct: 73  DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GTLVLVGL 129

Query: 300 SGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVD 336
             +  +          V      G F+  +  P  + 
Sbjct: 130 GSEMTTVPLLHAAIREV---DIKGVFRYCNTWPVAIS 163

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 51.5 bits (122), Expect = 1e-08
 Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 9/162 (5%)

Query: 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 224
           PQ  L  V  L C   T    +    +  PG  V V G+G +G    + A A GA  V  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 225 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
                 K + AK  G  E VN ++ D+    +         D+    +     +      
Sbjct: 61  TT-SEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113

Query: 285 CHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 326
             +  GT  +VG  A+  +       ++  R   G+  GG  
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP 154

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 47.7 bits (112), Expect = 2e-07
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 13/160 (8%)

Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
            G+ A    A V+ G+ V V G G +GL     AKA GA  V        + + AKN G 
Sbjct: 14  VGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEVAKNCGA 71

Query: 241 TEFVNPKDHDKPIQQVLV---DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297
              +      +    ++           + + +C GN   +   +       GT ++VG+
Sbjct: 72  DVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGTLMLVGM 130

Query: 298 AASGQEISTRPFQLVTGRVWKG-TAFGGFKSRSQVPWLVD 336
            +    +             +       F+  +  P  ++
Sbjct: 131 GSQMVTVPLVNA------CAREIDIKSVFRYCNDYPIALE 164

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (108), Expect = 7e-07
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 4/99 (4%)

Query: 11  KAAVAWEPNKPLVIE---DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCI 66
           +A   +E   P V++   D+ V  P+  +V IK+    +   + Y  SG    + L P  
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 67  LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 105
            G + AG++E+VG+  +  + GD V           ++ 
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYA 102

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 14/59 (23%), Positives = 21/59 (35%)

Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
          KA V      PL + D+     + GEV +++    L   D     G     L P  +  
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 7/159 (4%)

Query: 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227
           P      L CG  T    +       PG  V + GLG +G      +K A  +    I  
Sbjct: 2   PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISR 59

Query: 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
             +K + A   G   ++   +     ++         V  S     + ++M  A+    K
Sbjct: 60  SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAM----K 115

Query: 288 GWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK 326
             G  V + +    + +S +P+  +       +A G  K
Sbjct: 116 VGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 153

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 3/93 (3%)

Query: 9  TCKAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
            +A V  +        ++ + +     G+V +++ ++++ + D                
Sbjct: 3  AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT-YP 61

Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99
                     V       + GD VI       
Sbjct: 62 FVPGIDLAGVVVSSQHPRFREGDEVIATGYEIG 94

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.5 bits (93), Expect = 9e-05
 Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 5/104 (4%)

Query: 7   VITCKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
           +IT +A +  +  +P         ++        EV +K L + +  +D     G  P  
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 62  LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 105
                             EG+ EV      +   +A        
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSH 104

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 202

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           +++FGLG VG   A    A G   VIG+D+   K D              + 
Sbjct: 3   ISIFGLGYVGAVCAGCLSARG-HEVIGVDVSSTKIDLINQGKSPIVEPGLEA 53

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 18/151 (11%), Positives = 44/151 (29%), Gaps = 2/151 (1%)

Query: 175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
                 T    +  T +++P               +A     A  +++IG     +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI 294
           A   G  + +N ++ D  + + L ++T G                 +L+C  +       
Sbjct: 69  ALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSF 126

Query: 295 VGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325
              + +   ++               +  G+
Sbjct: 127 GNSSGAVTGVNLGILNQKGSLYVTRPSLQGY 157

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Length = 184

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

 Score = 38.0 bits (87), Expect = 6e-04
 Identities = 19/112 (16%), Positives = 30/112 (26%), Gaps = 6/112 (5%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VTEFVNPKDHDKPIQ 254
            AV GLG  G A A      G   V+  DID ++    ++ G                + 
Sbjct: 4   YAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLL 62

Query: 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIST 306
              + L     D     +  +     A           +I  +   G     
Sbjct: 63  TSDIGLAVKDADVILIVVPAIHHASIAANIASYISEGQLI--ILNPGATGGA 112

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Length = 196

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 38.0 bits (87), Expect = 7e-04
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
           +AV G G VGL++      +  + V  +DI P K D+  N          ++
Sbjct: 3   IAVAGSGYVGLSLG--VLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEY 52

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 5/152 (3%)

Query: 175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
            G    T   ++    ++ PG  V +          A        +R+        K + 
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM 65

Query: 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 293
               GV    + +  D      +++LTDG GVD     +   ++ R          G  +
Sbjct: 66  LSRLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAGEAIQRG--VQILAPGGRFI 121

Query: 294 IVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325
            +G      + S     L     +        
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVVDLDLN 153

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 26/84 (30%), Positives = 35/84 (41%)

Query: 22  LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
           L   +   A P   E++++     +   D Y  SG  P    P  LG EAAGIV  VG G
Sbjct: 15  LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 74

Query: 82  VTEVQPGDHVIPCYQAECRECKFC 105
           V  ++ GD V+    A        
Sbjct: 75  VKHIKAGDRVVYAQSALGAYSSVH 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	345
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.98
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.85
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.64
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.45
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.89
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.8
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.71
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.52
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.51
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.51
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.36
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.31
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.29
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.25
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.24
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.24
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.2
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.2
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.15
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.15
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.11
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.1
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.06
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.06
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.02
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.99
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.98
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.96
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.93
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.91
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.9
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.89
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.87
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.83
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.8
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.78
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.74
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.73
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.69
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.69
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.67
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.67
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.67
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.66
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.65
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.64
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.64
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.63
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.63
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.61
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.6
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.57
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.57
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.55
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.54
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.5
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.5
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.49
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.49
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.47
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.45
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.43
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.42
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.42
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.41
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.4
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.38
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.34
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.33
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.32
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.3
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.28
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.25
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.24
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.24
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.23
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.22
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.21
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.18
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.15
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.08
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.03
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.0
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.96
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.81
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.72
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.71
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.7
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.65
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.56
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.54
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.51
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.51
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.51
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.47
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.35
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.2
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.18
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.06
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.99
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.99
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.84
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.75
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.68
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.67
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.65
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.62
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.57
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.46
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.45
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.38
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.36
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.32
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.31
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.22
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.14
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.11
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.09
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.03
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	93.94
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.77
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	93.71
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.65
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.58
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.38
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.35
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.33
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.3
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.29
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.28
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.18
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.18
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.09
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.02
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.92
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.89
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.79
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.76
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	92.74
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.67
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.67
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.49
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.45
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.42
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.26
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.18
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.07
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.01
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	91.99
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.97
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.9
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.9
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	91.88
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.87
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.86
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.85
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.77
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.74
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.71
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.65
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.63
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.54
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.51
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.28
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.27
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.19
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	91.17
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.17
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.13
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.08
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.07
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.03
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.95
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	90.85
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	90.84
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.81
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.73
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	90.69
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.68
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.67
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	90.63
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.49
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	90.48
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	90.47
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.44
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	90.39
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	90.36
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	90.34
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.09
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.09
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	89.99
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	89.89
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	89.8
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	89.74
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.71
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	89.6
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.49
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.4
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.36
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	89.25
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.19
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.18
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.11
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.0
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.0
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.91
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.7
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	88.66
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	88.59
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	88.52
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.51
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	88.49
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.36
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.34
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.33
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.28
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.12
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	88.09
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.07
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.0
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	87.94
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.89
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.82
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.79
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	87.74
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	87.56
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	87.48
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	87.46
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.46
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.42
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	87.29
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.29
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	87.2
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.2
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	87.07
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.91
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.89
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	86.85
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.27
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	86.25
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	86.05
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.83
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	85.79
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	85.74
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	85.71
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.69
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.68
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.55
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.51
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.5
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	85.28
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.1
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	85.08
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.03
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.93
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	84.89
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	84.87
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	84.83
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.74
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.6
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.46
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.41
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.37
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.11
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	83.7
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	83.63
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.62
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	83.53
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	83.14
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.11
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.11
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.85
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	82.69
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	82.62
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.37
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.05
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.01
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	81.98
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	81.74
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.22
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	80.91
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.9
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	80.81
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	80.77
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	80.58
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	80.22
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.17
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	80.09
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	80.08
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	80.04

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=3.2e-39  Score=277.57  Aligned_cols=197  Identities=48%  Similarity=0.776  Sum_probs=182.4

Q ss_pred             CCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 019139            4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      -..+|++||++++++++|++++|++.|+|+++||||||.++|||++|++.+.|......+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCc
Confidence            35678999999999999999999999999999999999999999999999999877778999999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      ++++||||++.+..+|+.|.+|++++++.|.+.......+.. ..|..+...++.++.+..+.|+||||+++|++.++++
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~i  161 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccc-cCcccceeeccceeecccccCCceEEEEEchHHEEEC
Confidence            999999999999999999999999999999988776555554 6677777778888888888899999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      |++++++++|++.+++.|+++++....+.+.|++|||+
T Consensus       162 P~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         162 DPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999999888899999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=2.7e-38  Score=270.99  Aligned_cols=196  Identities=57%  Similarity=0.886  Sum_probs=176.8

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      +..|+|||+++++++++++++++|.|+|+++||||||.++|||++|+++++|.++...+|+++|||++|+|+++|++|+.
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence            35689999999999999999999999999999999999999999999999998877789999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||||++.+...|+.|.+|+.++++.|.........|.. .+...++..++.+++++.+.|+||||+++|+.+++++|
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             cCCCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence            99999999999999999999999999999876554334444 55555667788888888888999999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      ++++++++|.+.+++.|++.++......+.+++|||+
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999988666666788899874

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=8.6e-37  Score=263.14  Aligned_cols=195  Identities=46%  Similarity=0.808  Sum_probs=169.7

Q ss_pred             CCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 019139            4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +.-+|+|||++++++++|++++++|.|+|+++||||||.++|||++|++.++|.++ ..+|+++|||++|+|+++|++|+
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            34568999999999999999999999999999999999999999999999998765 35799999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCC---CceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG---AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                      ++++||||++.+...|+.|.+|+.++++.|.+......   .+.....+..+++.+|...++..+.|+|+||+++|+..+
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            99999999999999999999999999999987765421   122224455666778888888888999999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEc
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG  202 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~G  202 (345)
                      +++|++++++.++++.+++.++++++.   .+++|++|.|+.
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence            999999999998988888888887763   246899887763

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.5e-36  Score=259.34  Aligned_cols=191  Identities=28%  Similarity=0.543  Sum_probs=158.7

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +++|+|+++.+.+++|+++++|.|+|++||||||+.++|||++|++++.|.++. ++|+++|||++|+|+++|+++++|+
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc-cCCcccccceEEEeeecCccceeEc
Confidence            368999999999999999999999999999999999999999999999988754 6899999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccC--CCccccccCcceeeeeEEeecceEEEcC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN--GKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~--~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +||||+..+ .+|+.|.+|++++++.|++.......|.. .+|...+...  +....++.+.|+|+||.+++...++++|
T Consensus        80 vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip  157 (194)
T d1f8fa1          80 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  157 (194)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             cCceeeeec-ccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECC
Confidence            999996655 48999999999999999986544334443 4443333332  2334456667899999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI  225 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~  225 (345)
                      ++++++++                         +++.|+|++|++++|+|+.+|+.+|+++
T Consensus       158 ~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         158 KDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             TTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            99886554                         3456789999999999999999667664

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=6.1e-36  Score=252.69  Aligned_cols=171  Identities=24%  Similarity=0.414  Sum_probs=151.3

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      +.|+++.++++ ++++++|.|+|+++|||||+.++|||++|++++++...   ..+.|+++|||++|+|+++|+++++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34556678877 99999999999999999999999999999998876542   236789999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||++.+...|+.|.+|.+++.+.|++....   |....+                  |+|+||+++|+++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~~~~------------------G~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPDD------------------GNLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTBC------------------CSCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce---eccccc------------------cccceeeeecccceeeCCCC
Confidence            999999999999999999999999999887653   222133                  49999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL  203 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga  203 (345)
                      ++++++|.+++++.|||+++ +..++++|++|+|+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            99999999999999999986 7889999999999875

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=1.3e-35  Score=254.49  Aligned_cols=192  Identities=48%  Similarity=0.831  Sum_probs=163.9

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      -+.++|||+++++++++++++|+|.|+|+++||||||.++|||++|+++++|.++. .+|+++|||++|+|+++|+++++
T Consensus         4 ~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           4 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCccccc
Confidence            35679999999999999999999999999999999999999999999999987754 68999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||||++.+...|+.|.+|+++++++|.........|.. .++..++..++.+++.....|+|+||+.+++..++++|
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhcccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            99999999999999999999999999999887765444444 55556666677777777778999999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHH
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL  208 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~  208 (345)
                      ++++++.++...+.+.+          +.++++|+|+|+|++|+
T Consensus       162 ~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             CCCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            99998776655444332          23345588888888775

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.3e-35  Score=248.51  Aligned_cols=173  Identities=29%  Similarity=0.409  Sum_probs=153.0

Q ss_pred             CcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 019139            5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +.|.+|||+++.+++++++++++|.|+|++|||||||.++|||++|++.++|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcc
Confidence            35789999999999999999999999999999999999999999999999998864 47899999999999999999999


Q ss_pred             CCCCCCEEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEE
Q 019139           84 EVQPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK  162 (345)
Q Consensus        84 ~~~~Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  162 (345)
                      .+++||||+..+ ...|+.|.+|+.++++.|.+...   .|.. .+|                  +|+||+.++++++++
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~-~~g------------------g~aey~~v~~~~~~~  138 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYS-VNG------------------GYAEYVLADPNYVGI  138 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BCC------------------SSBSEEEECTTTSEE
T ss_pred             ccccCCEEEeccccccCCccccccCCcccccccccc---cccc-ccc------------------ccceEEEechHHEEE
Confidence            999999998765 46899999999999999987765   3333 333                  999999999999999


Q ss_pred             cCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       163 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      +|++++++.++++.+++.|+++++ +... .+|++|||+
T Consensus       139 iPd~l~~~~a~~~~~~~~t~~~~~-~~g~-~~G~~VLVl  175 (175)
T d1llua1         139 LPKNVKATIHPGKLDDINQILDQM-RAGQ-IEGRIVLEM  175 (175)
T ss_dssp             CCTTCCCCEEEECGGGHHHHHHHH-HTTC-CSSEEEEEC
T ss_pred             CCCCCChhHHHHHHhHHHHHHHHH-HhCC-CCCCEEEeC
Confidence            999999998888888999988866 4343 469999984

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=2e-34  Score=247.35  Aligned_cols=193  Identities=48%  Similarity=0.771  Sum_probs=164.5

Q ss_pred             CCcceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 019139            4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      ..-+++|||+++++++++++++++|.|+|+++||||||.++|||++|++.++|.++. ++|+++|||++|+|+++|++++
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCcccc
Confidence            345689999999999999999999999999999999999999999999999997654 5899999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      ++++||||++.+...|+.|.+|+.++++.|.........|.. .++...+..++.++++.+..|+|+||+++|+.+++++
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            999999999999999999999999999999988776555544 5555666678888888888899999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      |++++++.++....++.....   ....+++|++|.|+
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi  195 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINE---GFDLLRSGESIRTI  195 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEE
Confidence            999988766654444433222   12335788888775

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.2e-34  Score=242.93  Aligned_cols=166  Identities=29%  Similarity=0.371  Sum_probs=150.6

Q ss_pred             eeeeeccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 019139           11 KAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        11 ~a~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      ||+++.+.++|+++++++.|++ ++||||||+.|++||++|++++.|.++   .+.+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999985 689999999999999999999988764   346899999999999999999999999


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||||++.+...|++|.+|++++++.|.+...   .|+. .+|                  +|+||+++|.+.++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-IDG------------------GFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BCC------------------SSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccc---ceee-ccc------------------ccceeeeehhhcceecCCC
Confidence            99999999999999999999999999988765   3333 344                  9999999999999999999


Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEE
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV  200 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI  200 (345)
                      ++++.++++.+++.|+|+++ +...+ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99988988888999999987 56777 8999997

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.3e-34  Score=242.18  Aligned_cols=174  Identities=24%  Similarity=0.369  Sum_probs=146.6

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCC---
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT---   83 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~---   83 (345)
                      +++|||++++++++++++++++.|+|+++||||||.++|||++|+++++|.++..++|+++|||++|+|+++|++|+   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            57899999999999999999999999999999999999999999999999988778999999999999999999985   


Q ss_pred             --CCCCCCEEEecCcCCCCCCccccCCCC-CCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEee-cce
Q 019139           84 --EVQPGDHVIPCYQAECRECKFCKSGKT-NLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVS  159 (345)
Q Consensus        84 --~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~  159 (345)
                        .+++||+|++.+..+|+.|.+|+.+++ +.|.+...+   |+.           +.........|+|+||++++ +.+
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~~-----------~~~~~~~~~~Gg~ae~~~v~~~~~  147 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GIN-----------RGCSEYPHLRGCYSSHIVLDPETD  147 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTT-----------CCSSSTTCCCSSSBSEEEECTTCC
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceee---ccC-----------CCCCCCCCcceeCcCcEEechhHc
Confidence              468999999999999999999999985 568876653   211           00000012245999999995 579


Q ss_pred             EEEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       160 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      ++++|+++++++      ++++|++++ +...+++|++|+|+
T Consensus       148 v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         148 VLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             EEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             EEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            999999998653      455777776 77889999999997

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-34  Score=244.25  Aligned_cols=173  Identities=23%  Similarity=0.295  Sum_probs=148.9

Q ss_pred             ceeeeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC---CCCCCcccCcceeEEEEEeCCCCC
Q 019139            7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVT   83 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~v~   83 (345)
                      +.++.|++++++++ ++++++|.|+|++|||||||.++|||++|++++++...   ..++|+++|||++|+|+++|++++
T Consensus         5 ~p~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~   83 (185)
T d1pl8a1           5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (185)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             CCCCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEecccee
Confidence            34688999999987 99999999999999999999999999999999875432   236889999999999999999999


Q ss_pred             CCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEc
Q 019139           84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI  163 (345)
Q Consensus        84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i  163 (345)
                      +|++||||++.+...|+.|.+|+.++++.|.+....   |....+|                  +|+||++++.++++++
T Consensus        84 ~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~---g~~~~~G------------------~~aey~~~~~~~~~~l  142 (185)
T d1pl8a1          84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPPDDG------------------NLCRFYKHNAAFCYKL  142 (185)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTTBCC------------------SCBSEEEEEGGGEEEC
T ss_pred             eecccccceecceeccccchhhccchhchhccceee---ecccccc------------------cceEEEEEchHHEEEC
Confidence            999999999999999999999999999999887653   2222333                  8999999999999999


Q ss_pred             CCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCCh
Q 019139          164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT  205 (345)
Q Consensus       164 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~  205 (345)
                      |+++++++|+.++  +++|++++ +..++++|++|+| |+|+
T Consensus       143 P~~~~~~~aa~~p--l~~a~~a~-~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         143 PDNVKPLVTHRFP--LEKALEAF-ETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             CTTCGGGEEEEEE--GGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred             CCCCCHHHHHHHH--HHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence            9999999887654  45677765 6677899999998 5553

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.6e-34  Score=242.63  Aligned_cols=181  Identities=18%  Similarity=0.245  Sum_probs=152.2

Q ss_pred             CcceeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139            5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus         5 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +.|.+|||+++..+++.  +++.+.+.++++|+|||||+.|+|||++|++.+.|.++..++|+++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            45789999999987654  7778887777899999999999999999999999988877899999999999999999987


Q ss_pred             -CCCCCCCEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceE
Q 019139           83 -TEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV  160 (345)
Q Consensus        83 -~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  160 (345)
                       +.+++||||.+.+. ..|+.|.+|+.++++.|.+....... .. .+|             ....|+||||+++|+..+
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~-~~-~~G-------------~~~~Ggfaey~~v~~~~~  146 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ-PY-EDG-------------YVSQGGYANYVRVHEHFV  146 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSC-BC-TTS-------------CBCCCSSBSEEEEEGGGE
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccc-cc-ccc-------------cccccceeeEEEeehHHe
Confidence             66999999977664 68999999999999999987653111 00 111             233469999999999999


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      +++|+++++++|+.+...+.|||+++ +.++++++++|+|.
T Consensus       147 ~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         147 VPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             EECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            99999999988776665577999987 68899999999975

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=2e-35  Score=248.41  Aligned_cols=171  Identities=21%  Similarity=0.201  Sum_probs=141.5

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||+++.++++ ++++++|.|+|+++|||||+.++|||++|++.+.+..+..++|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 99999999999999999999999999999988766565567899999999999999999999999999


Q ss_pred             EEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec--ceEEEcCCCC
Q 019139           90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQA  167 (345)
Q Consensus        90 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~iP~~l  167 (345)
                      ||++.+..+|++|.+|++++++.|.+.......|.. .+                  |+|+||+++|.  ..++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~-~~------------------G~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF-KD------------------GVFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTT-BC------------------CSSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCC-CC------------------hhcCeeEEEEhhhCeEEECCCCc
Confidence            999999999999999999999999877553323322 23                  49999999986  4689999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHH
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA  211 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~  211 (345)
                      ++++++....   +++.++        ++.++++|+|++|+.++
T Consensus       141 ~~~~~~~~~~---~~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         141 DLSKLVTHVY---HGFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             CGGGGEEEEE---ESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             chHHHHHHHH---HHHHHh--------cCceEEECCCHHHhhee
Confidence            9887765332   233322        23467777777776543

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=7e-33  Score=233.60  Aligned_cols=166  Identities=25%  Similarity=0.391  Sum_probs=140.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCC--------CCCCCcccCcceeEEEEEeCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      |||+++.++|++++++++|.|+|++||||||+.++|||++|+++++|.++        ..++|+++|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999999999999999999999999999999999999999998653        2368999999999999999999


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecce-E
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-V  160 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-~  160 (345)
                      +++|++||||++.+...|+.|.+|+.++++.|.+...   .|+. .+|                  +||||+++++.+ +
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FDG------------------AYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BCC------------------SSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcce---eeec-ccc------------------ccccEEEEEhHHeE
Confidence            9999999999999999999999999999999998765   3333 334                  999999998655 5


Q ss_pred             EEcCCCCChhhhccc-ccchhhhhHHHHhhcCCCCCCEEEE
Q 019139          161 AKIDPQAPLDKVCLL-GCGVPTGLGAVWNTAKVEPGSIVAV  200 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~-~~~~~ta~~al~~~~~~~~g~~VlI  200 (345)
                      +++|+ +++.++|++ ..++.++++++ +..+. .|++|||
T Consensus       139 ~~~~~-~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRR-VKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSS-SCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             EECCC-CChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            55555 544555544 56888999877 55554 5888887

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.98  E-value=3.7e-35  Score=251.77  Aligned_cols=191  Identities=21%  Similarity=0.256  Sum_probs=155.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCC-------CCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPP-------QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV   82 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~-------~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v   82 (345)
                      +||++++++++ ++++|+|.|++       .++||+||+.+++||++|+++++|.++. ++|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~-~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA-QVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC-CTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc-ccceeccceeeeeeecccccc
Confidence            69999999998 99999999865       4699999999999999999999987754 689999999999999999999


Q ss_pred             CCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeec--ceE
Q 019139           83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSV  160 (345)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~  160 (345)
                      ++|++||||++.+..+|+.|.+|++++++.|.........|......            .....|+|+||+++|.  ..+
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~------------~~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD------------MGDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTT------------SCCBCCCSBSEEEESSHHHHC
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccC------------CCccccccccEEEeehHHCeE
Confidence            99999999999999999999999999999997765442222210000            0112369999999985  369


Q ss_pred             EEcCCCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 019139          161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA  219 (345)
Q Consensus       161 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~  219 (345)
                      ++||++.++.+++++..++.++++++ +....+.+    ++|+|++|++++|+||++|+
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            99999877777777777788888875 33333333    35889999999999999885

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=2.1e-32  Score=229.39  Aligned_cols=168  Identities=30%  Similarity=0.470  Sum_probs=143.1

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++++++++++++++|.|+|++|||||||+++|||++|++.+++.. ....+|.++|||++|+|+++|+.++.+++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999887654 344789999999999999999999999999


Q ss_pred             CEEEecCc-CCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCC
Q 019139           89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA  167 (345)
Q Consensus        89 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l  167 (345)
                      |||++.+. ..|+.|..|..+.++.|.....   .|.. .+                  |+||||+++|+++++++|+++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~~  138 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VD------------------GGYAEYCRAAADYVVKIPDNT  138 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGCEECCTTC
T ss_pred             eEEeeccccccccccccccCCCccccccccc---ccee-cc------------------CccccceEecHHHEEECCCCC
Confidence            99987654 6789999999999999988764   2322 33                  499999999999999999999


Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL  203 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga  203 (345)
                      +++.|+ +. .+.++++++ ....+ +|++|||+|-
T Consensus       139 ~~e~A~-l~-~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         139 IIEVQP-LE-KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             CEEEEE-GG-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             CHHHHH-HH-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence            986554 44 456677765 34455 5999999873

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.2e-31  Score=225.81  Aligned_cols=166  Identities=25%  Similarity=0.414  Sum_probs=134.9

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD   89 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~Gd   89 (345)
                      |||++..++++||+++|+|.|+|++||||||+.++|||++|++.+.|..+...+|+++|||++|+|+++|++|+++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            89999999999999999999999999999999999999999999999887778999999999999999999999999999


Q ss_pred             EEEecC-cCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        90 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      +|.+.+ ...|++|.+|+.+++++|.+..+.. .+.....+             ..+.|+|+||+++|+++++++|+...
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~-------------~~~~GgfaEy~~v~~~~~~~ip~~~~  146 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTY-NSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRVADI  146 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred             EEEEcccccccCccccccCcccccCCCccccc-cccCCCCC-------------cccccccceEEEechHHEEECCCCCc
Confidence            997766 4799999999999999999865431 11110000             12236999999999999999996653


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVE  193 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~  193 (345)
                      ....+   .++.++++++ .++.++
T Consensus       147 ~~~~a---~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         147 EMIRA---DQINEAYERM-LRGDVK  167 (179)
T ss_dssp             EEECG---GGHHHHHHHH-HTTCSS
T ss_pred             ChhHh---chhHHHHHHH-HHhCcc
Confidence            32222   2556778766 334443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=3.2e-30  Score=216.56  Aligned_cols=172  Identities=30%  Similarity=0.514  Sum_probs=159.9

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++.|+.++|++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++++++++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~   81 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK   81 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCC
Confidence            56789999999999999999999999999999999999999999999999998888899999999999999999999998


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~  326 (345)
                      +  +++.+.+++++++++|++|||+|++.+++.+++.++++ |+++++|......+.++++..++. +++|+|++++++.
T Consensus        82 ~--~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~  158 (174)
T d1f8fa2          82 T--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS  158 (174)
T ss_dssp             T--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred             C--cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCC
Confidence            7  67889999999889999999999999899999999997 999999986556678899999887 9999999998887


Q ss_pred             ccccHHHHHHHHhccc
Q 019139          327 SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~  342 (345)
                      .+++++++++++++||
T Consensus       159 ~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         159 PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHcCC
Confidence            7889999999999986

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=1.5e-29  Score=212.24  Aligned_cols=173  Identities=50%  Similarity=0.856  Sum_probs=152.6

Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      |.+||++.|++.|+|+++++..++++|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999989999999999999999999999999999999989999999999999999999999999876


Q ss_pred             CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCccc
Q 019139          249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR  328 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  328 (345)
                      .+....+.....+++++|++||++|++.++...+..+++++|+++++|......++++++..++++++|+|++++++. .
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-~  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-G  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-G
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-H
Confidence            444455555556666999999999999989999988876339999999876677888888777678999999998874 4


Q ss_pred             ccHHHHHHHHhccc
Q 019139          329 SQVPWLVDKYMKKV  342 (345)
Q Consensus       329 ~~~~~~~~~~~~g~  342 (345)
                      +|++++++++++||
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            69999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.97  E-value=1.5e-29  Score=212.10  Aligned_cols=173  Identities=49%  Similarity=0.915  Sum_probs=154.3

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||.++|++.|+|+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            57899999999999999998999999999999999999999999999999998899999999999999999999999976


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS  327 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  327 (345)
                      +.+...........++++|++|||+|++.+++++++++++++|+++++|...  .++++++..++.+++|+|++++++..
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhccCEEEEEEeeCCCh
Confidence            5444445455555556999999999999999999999998339999999853  46788888877788999999999988


Q ss_pred             cccHHHHHHHHhccc
Q 019139          328 RSQVPWLVDKYMKKV  342 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~  342 (345)
                      +++++++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            899999999999986

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-29  Score=206.68  Aligned_cols=145  Identities=20%  Similarity=0.306  Sum_probs=130.7

Q ss_pred             eeeeeeeccCCCC--eEEE-EeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCC
Q 019139            9 TCKAAVAWEPNKP--LVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         9 ~~~a~~~~~~~~~--~~~~-~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      -|||+++++.|.+  ++++ ++|.|+|++|||||||.+++||++|.+.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            3899999988876  7774 689999999999999999999999999999887654 78999999999999999999999


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      |++||||+..+.                              .+                  |+|+||+.+++++++++|
T Consensus        82 ~~vGdrV~~~~~------------------------------~~------------------G~~ae~~~v~~~~~~~iP  113 (150)
T d1yb5a1          82 FKKGDRVFTSST------------------------------IS------------------GGYAEYALAADHTVYKLP  113 (150)
T ss_dssp             CCTTCEEEESCC------------------------------SS------------------CSSBSEEEEEGGGEEECC
T ss_pred             cccCcccccccc------------------------------cc------------------cccccccccccccccccc
Confidence            999999975322                              22                  399999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF  201 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~  201 (345)
                      +++++++||+++++..|+|+++...+..+.|+++||+
T Consensus       114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999999999999899999999999873

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=1.8e-28  Score=205.98  Aligned_cols=174  Identities=69%  Similarity=1.128  Sum_probs=150.1

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||.++|++.|+|+++.+..++++|++|+|+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46889999999999999998899999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCC-ceecChhhhccccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ-EISTRPFQLVTGRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~  326 (345)
                      +..++..+.+++.+++++|++||++|++.+++.+..+++++ |+++.++...... ....++..++++++|+|++++++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            65455666666666669999999999999889999999997 7877775444333 334444445559999999999988


Q ss_pred             ccccHHHHHHHHhccc
Q 019139          327 SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~  342 (345)
                      .+++++++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            8899999999999986

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=3.3e-28  Score=204.30  Aligned_cols=172  Identities=49%  Similarity=0.886  Sum_probs=153.1

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||.++|++.|+|+++.+..++++|++|+|+|+|++|++++|+++.+|+.+|++++.+++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            57899999999999999998999999999999999999999999999999987999999999999999999999999987


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  326 (345)
                      +.+ ...+.+.+.+.+ ++|++||++|.+.+...++..+.+++|+++++|....+..+.+++..++++++|+|+++|+.+
T Consensus        83 ~~~-~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DST-KPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GCS-SCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccc-hHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            633 334555555555 999999999999888888887765449999999987778888988887779999999999998


Q ss_pred             ccccHHHHHHHHhc
Q 019139          327 SRSQVPWLVDKYMK  340 (345)
Q Consensus       327 ~~~~~~~~~~~~~~  340 (345)
                      .++|++++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            89999999999865

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.4e-28  Score=202.37  Aligned_cols=167  Identities=20%  Similarity=0.265  Sum_probs=150.5

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ||+++||+++++++|||++|.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5889999999999999999988999999999999997 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +++  .++.+.+++.+++ ++|++||++|++ .++.++++++++ |+++.+|..   ...++++..++. +++|+|+.++
T Consensus        80 ~~~--~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~---~~~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HRE--VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSR---GTIEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTS--TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCC---SCEEECTHHHHTTTCEEEECCGG
T ss_pred             ccc--ccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCC-CEEEEEecC---CCCCCCHHHHHHCCCEEEEEEec
Confidence            987  7889999999988 999999999974 599999999997 999999963   257888888887 9999999876


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                      +. ..++++++++++++|.
T Consensus       153 ~~-~~~~~~~~~~~l~~g~  170 (174)
T d1yb5a2         153 SS-TKEEFQQYAAALQAGM  170 (174)
T ss_dssp             GC-CHHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHHH
Confidence            54 4578899999888764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=6.1e-28  Score=202.33  Aligned_cols=170  Identities=29%  Similarity=0.418  Sum_probs=150.5

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +++++|+.++++++|+|+++ +..++++|++|+|+|+|++|++++|+||.+|+++|++++.+++|+++++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999986 77899999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhh--c-cccEEEEeee
Q 019139          247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL--V-TGRVWKGTAF  322 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~--~-~~~~i~g~~~  322 (345)
                      ++  +++.+.+.+++++ ++|++|||+|++.++++++++++++ |+++++|.+.....++++...+  . .++++.|+.+
T Consensus        80 ~~--~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KN--GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GG--SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cc--hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            87  6788999999988 9999999999988899999999997 9999999876666666665443  3 3899999987


Q ss_pred             cCCcccccHHHHHHHHhccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~  342 (345)
                      ++.  +..+++++++++.||
T Consensus       157 ~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CCC--cccHHHHHHHHHcCC
Confidence            654  355788889998886

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=2.6e-27  Score=198.94  Aligned_cols=175  Identities=55%  Similarity=1.004  Sum_probs=147.8

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||.++|+++|+|+++.+..++++|++|+|+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999999999999999999999999999999999999988999999999999999999999999986


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCcc
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS  327 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  327 (345)
                      +.++...+.+....++++|++||++|.+.++..++..++++.|++++.+..........++..++++++|.|+++++++.
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            64444555555555559999999999999899999999886245555555443434444455445599999999998888


Q ss_pred             cccHHHHHHHHhccc
Q 019139          328 RSQVPWLVDKYMKKV  342 (345)
Q Consensus       328 ~~~~~~~~~~~~~g~  342 (345)
                      +++++++++++++||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            899999999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=8.1e-28  Score=203.18  Aligned_cols=173  Identities=24%  Similarity=0.353  Sum_probs=150.3

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++.+|.+.|+++|||+++.+..++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            34678888999999999998889999999999999999999999999999998899999999999999999999999988


Q ss_pred             CCC-ccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh-hcc-ccEEEEeeec
Q 019139          248 DHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT-GRVWKGTAFG  323 (345)
Q Consensus       248 ~~~-~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~-~~~i~g~~~~  323 (345)
                      +.+ .+..+.+.+++.+ ++|+||||+|++.+++.++++++++ |+++++|......++++++.. ++. +++|+|++++
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            732 2344567778877 9999999999988899999999998 999999987667788888765 444 9999999876


Q ss_pred             CCcccccHHHHHHHHhccccC
Q 019139          324 GFKSRSQVPWLVDKYMKKVNL  344 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~~~  344 (345)
                      +.   +++++++++++++..+
T Consensus       161 ~~---~~~~~~~~~i~~~~~l  178 (182)
T d1vj0a2         161 DT---SHFVKTVSITSRNYQL  178 (182)
T ss_dssp             CH---HHHHHHHHHHHTCHHH
T ss_pred             CH---HHHHHHHHHHHHChHH
Confidence            44   7889999998887643

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.5e-27  Score=194.49  Aligned_cols=141  Identities=22%  Similarity=0.290  Sum_probs=122.7

Q ss_pred             eeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        11 ~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      +++.|.++|.|  +++++++.|+|++|||+|||.|++||++|+++++|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            46788888887  8999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |||+....                              .                  .|+|+||++++.+.++++|++++
T Consensus        82 drV~~~~~------------------------------~------------------~G~~ae~~~v~~~~~~~~P~~~~  113 (147)
T d1qora1          82 DRVVYAQS------------------------------A------------------LGAYSSVHNIIADKAAILPAAIK  113 (147)
T ss_dssp             CEEEESCC------------------------------S------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeecc------------------------------c------------------cccceeEEEEehHHeEEcCcccc
Confidence            99963211                              1                  24999999999999999999998


Q ss_pred             hhhhc--ccccchhhhhHHHHhhcCCCCCCEEEE
Q 019139          169 LDKVC--LLGCGVPTGLGAVWNTAKVEPGSIVAV  200 (345)
Q Consensus       169 ~~~aa--~~~~~~~ta~~al~~~~~~~~g~~VlI  200 (345)
                      +++++  ++++...++++++.+ .++++|++|||
T Consensus       114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            87554  456666777777754 67899999997

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=1.8e-27  Score=198.76  Aligned_cols=167  Identities=20%  Similarity=0.249  Sum_probs=151.8

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ||+.+||+++|++.|||+++ +..+++++++|+|+|+ |++|++++|+++.+|+.+|++++.+++|+++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999987 6788999999999996 999999999999999879999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +++  .++.+.+.+.+.+ ++|++|||+|++.+++.++++++++ |+++++|.+.  .++++++..++. +++|+|++.+
T Consensus        80 ~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~Gs~~~  154 (170)
T d1jvba2          80 ASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG--ADLHYHAPLITLSEIQFVGSLVG  154 (170)
T ss_dssp             TTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSC--CCCCCCHHHHHHHTCEEEECCSC
T ss_pred             cCC--cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEecccc--CccccCHHHHHhCCcEEEEEecC
Confidence            877  6788888888877 8999999999998899999999997 9999999864  357788888877 9999999876


Q ss_pred             CCcccccHHHHHHHHhccc
Q 019139          324 GFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       324 ~~~~~~~~~~~~~~~~~g~  342 (345)
                      ++   ++++++++++++||
T Consensus       155 ~~---~d~~~~l~lv~~GK  170 (170)
T d1jvba2         155 NQ---SDFLGIMRLAEAGK  170 (170)
T ss_dssp             CH---HHHHHHHHHHHTTS
T ss_pred             CH---HHHHHHHHHHHcCC
Confidence            44   88999999999986

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=8.2e-28  Score=197.11  Aligned_cols=148  Identities=15%  Similarity=0.181  Sum_probs=125.5

Q ss_pred             eeeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 019139            8 ITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE   84 (345)
Q Consensus         8 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~v~~   84 (345)
                      .+|||+++.+++++  +++++++.|+|++|||||||.++|||++|++.+.|.++. ...|+++|+|++|+|++  +.++.
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~   79 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR   79 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence            37999999999886  457899999999999999999999999999999887764 37899999999999999  55678


Q ss_pred             CCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcC
Q 019139           85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID  164 (345)
Q Consensus        85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP  164 (345)
                      +++||+|+.....                        .+.. .+                  |+||||+.+|++.++++|
T Consensus        80 ~~~g~~v~~~~~~------------------------~~~~-~~------------------G~~aEy~~v~~~~~~~iP  116 (152)
T d1xa0a1          80 FREGDEVIATGYE------------------------IGVT-HF------------------GGYSEYARLHGEWLVPLP  116 (152)
T ss_dssp             CCTTCEEEEESTT------------------------BTTT-BC------------------CSSBSEEEECGGGCEECC
T ss_pred             cccCCEEEEecCc------------------------cccc-cC------------------CCcceeeeehhhccccCC
Confidence            9999999754220                        0000 22                  499999999999999999


Q ss_pred             CCCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEc
Q 019139          165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG  202 (345)
Q Consensus       165 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~G  202 (345)
                      ++++ .+||+++++..||+.++....+++ |++|||+|
T Consensus       117 ~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         117 KGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             TTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            9998 578889999999999888888886 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=1.2e-27  Score=190.72  Aligned_cols=129  Identities=19%  Similarity=0.207  Sum_probs=116.7

Q ss_pred             eeeeeeccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCCCCCC
Q 019139           10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQPG   88 (345)
Q Consensus        10 ~~a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~~~~G   88 (345)
                      |||+++.+.|+++++++++.|+|++|||+||+.++|||++|++.++|.++.. .+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            8999999999999999999999999999999999999999999999987654 78999999999999           39


Q ss_pred             CEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCCCC
Q 019139           89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP  168 (345)
Q Consensus        89 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~  168 (345)
                      |+|+...                               .+                  |+|+||+.++++.++++|++++
T Consensus        70 d~V~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~~P~~~~  100 (131)
T d1iz0a1          70 RRYAALV-------------------------------PQ------------------GGLAERVAVPKGALLPLPEGRP  100 (131)
T ss_dssp             EEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred             ceEEEEe-------------------------------cc------------------CccceeeeeCHHHeEEccCCCC
Confidence            9997432                               22                  3999999999999999999999


Q ss_pred             hhhhcccccchhhhhHHHHhhcCCCCCCEEEE
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV  200 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI  200 (345)
                      +++||.+++++.|||++|.+.+  +.|++||+
T Consensus       101 ~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~  130 (131)
T d1iz0a1         101 VVGPVFPFAEAEAAFRALLDRG--HTGKVVVR  130 (131)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTT--CCBEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc--cCCCEEEE
Confidence            9999999999999999997665  45888886

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=1.6e-26  Score=193.88  Aligned_cols=173  Identities=57%  Similarity=1.053  Sum_probs=144.0

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      ++++||.++|++.|+|+++.+..++++|++|+|+|+|++|++++++++..|+.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57889999999999999998999999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK  326 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  326 (345)
                      +.+ +..+.+.+.+.+ ++|++||++|+..++..++.++++++++++..|. .........+..++++++|+|+++|+++
T Consensus        82 ~~~-~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~-~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  159 (175)
T d1cdoa2          82 DHS-EPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFK  159 (175)
T ss_dssp             GCS-SCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSC-CSSSCEEECHHHHHTTCEEEECSGGGCC
T ss_pred             Ccc-hhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEe-cCCcccCccHHHHHCCcEEEEEEEeCCc
Confidence            633 334455555544 9999999999998888989988876345555555 3333333333333449999999999988


Q ss_pred             ccccHHHHHHHHhccc
Q 019139          327 SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       327 ~~~~~~~~~~~~~~g~  342 (345)
                      .+++++++++++++||
T Consensus       160 ~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         160 GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            8899999999999986

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=8e-27  Score=195.21  Aligned_cols=164  Identities=22%  Similarity=0.358  Sum_probs=146.2

Q ss_pred             hhhhcccccchhhhhHHHHhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          169 LDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       169 ~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +.++|++++++.|||+++.+.. .+++|++|+|+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5789999999999999997765 479999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      +   +..+.+.+.+.+ ++|++||++|+..+++.++++++++ |+++++|..   .++++++..++. +++|+|++.+++
T Consensus        86 ~---~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~---~~~~~~~~~l~~k~~~i~Gs~~~~~  158 (172)
T d1h2ba2          86 R---DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG---GELRFPTIRVISSEVSFEGSLVGNY  158 (172)
T ss_dssp             S---CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCS---SCCCCCHHHHHHTTCEEEECCSCCH
T ss_pred             c---cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCc---ccccCCHHHHHhCCcEEEEEEecCH
Confidence            5   345566677777 9999999999988899999999997 999999973   247888888888 999999987754


Q ss_pred             cccccHHHHHHHHhccc
Q 019139          326 KSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~  342 (345)
                         ++++++++++++||
T Consensus       159 ---~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 ---VELHELVTLALQGK  172 (172)
T ss_dssp             ---HHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHcCC
Confidence               78999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=3.7e-26  Score=189.94  Aligned_cols=164  Identities=23%  Similarity=0.327  Sum_probs=145.1

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +|+++||+++|++.|||+++ +..++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999998 56899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      .+  .++.+.+.+.+. +.+.++++++++.+++.++++++++ |+++.+|...  .+.++++..++. +++|+|++.+++
T Consensus        79 ~~--~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~~~~  152 (166)
T d1llua2          79 RQ--EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP--GDFPTPIFDVVLKGLHIAGSIVGTR  152 (166)
T ss_dssp             TT--SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCCH
T ss_pred             cc--hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC--CCccCCHHHHHhCCcEEEEEeecCH
Confidence            87  567777777664 4666677778788899999999997 9999999853  467888888887 999999987654


Q ss_pred             cccccHHHHHHHHhcc
Q 019139          326 KSRSQVPWLVDKYMKK  341 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g  341 (345)
                         ++++++++++++|
T Consensus       153 ---~d~~e~l~l~~~G  165 (166)
T d1llua2         153 ---ADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHCc
Confidence               7899999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-25  Score=186.15  Aligned_cols=166  Identities=21%  Similarity=0.309  Sum_probs=141.7

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +|+++||... ++++||+++ ++.++++|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4678888664 888999986 77899999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCccHHHH---HHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          247 KDHDKPIQQV---LVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       247 ~~~~~~~~~~---~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      .+  .+..+.   +....+.++|++||++|++.+++.++++++++ |+++++|.+.  .+.++++..++. +++|+|++.
T Consensus        79 ~~--~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~--~~~~~~~~~~~~k~l~i~Gs~~  153 (171)
T d1pl8a2          79 SK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVFR  153 (171)
T ss_dssp             SS--CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECCS
T ss_pred             cc--cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHHCCcEEEEEeC
Confidence            76  333332   22233348999999999999999999999997 9999999864  356788888877 999999863


Q ss_pred             cCCcccccHHHHHHHHhcccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~~  343 (345)
                      +    .++++++++++++|++
T Consensus       154 ~----~~~~~~al~li~~gki  170 (171)
T d1pl8a2         154 Y----CNTWPVAISMLASKSV  170 (171)
T ss_dssp             C----SSCHHHHHHHHHTTSC
T ss_pred             C----HhHHHHHHHHHHcCCC
Confidence            2    3689999999999985

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=6.9e-25  Score=182.87  Aligned_cols=166  Identities=22%  Similarity=0.298  Sum_probs=140.8

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +|+++||.+. ++++||+++ ++.++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4788888764 788999987 77889999999999999999999999999999 89999999999999999999988766


Q ss_pred             CCCCcc---HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeee
Q 019139          247 KDHDKP---IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAF  322 (345)
Q Consensus       247 ~~~~~~---~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  322 (345)
                      +....+   ..+.+.+..++++|++||++|++.+++.++++++++ |+++.+|.+.  .+.++++..++. +++|+|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC--CCCCcCHHHHHHCCCEEEEEEC
Confidence            543333   334455555559999999999998899999999997 9999999854  356788888887 999999863


Q ss_pred             cCCcccccHHHHHHHHhccc
Q 019139          323 GGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~g~  342 (345)
                      .    .++++++++++++||
T Consensus       155 ~----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 Y----CNDYPIALEMVASGR  170 (170)
T ss_dssp             C----SSCHHHHHHHHHTTS
T ss_pred             C----HHHHHHHHHHHHcCC
Confidence            2    358999999999986

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=7.2e-26  Score=191.11  Aligned_cols=169  Identities=18%  Similarity=0.246  Sum_probs=145.2

Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD  248 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~  248 (345)
                      +|||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.+.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            4799999999999999999999999999999987 9999999999999999 8999889999999999999999999887


Q ss_pred             CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhccccEEEEeeecCCc-
Q 019139          249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFK-  326 (345)
Q Consensus       249 ~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-  326 (345)
                        .++.+.+++.+++ ++|++||++|++ .++.++++|+++ |+++.+|.........+....+.+++++.++...... 
T Consensus        80 --~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 --VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             --STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             --cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence              7899999999988 999999999985 499999999997 9999999754444445555555559999888643221 


Q ss_pred             -----ccccHHHHHHHHhcccc
Q 019139          327 -----SRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       327 -----~~~~~~~~~~~~~~g~~  343 (345)
                           .++.++++++++++|++
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i  177 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKL  177 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSS
T ss_pred             cCHHHHHHHHHHHHHHHHCCCC
Confidence                 13567888999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.8e-25  Score=183.95  Aligned_cols=166  Identities=23%  Similarity=0.360  Sum_probs=146.9

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP  246 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~  246 (345)
                      +|+++||++++++.|||+++ +..++++|++|+|+|+|++|++++|+++..|+ +|++++++++|++.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999987 57789999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCC
Q 019139          247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF  325 (345)
Q Consensus       247 ~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  325 (345)
                      .+  .++.+.+.+.+.+..|++ ++.++..++..++++++++ |+++++|...  .+.+++...++. ++++.|+.+++ 
T Consensus        79 ~~--~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~-  151 (168)
T d1rjwa2          79 LK--EDAAKFMKEKVGGVHAAV-VTAVSKPAFQSAYNSIRRG-GACVLVGLPP--EEMPIPIFDTVLNGIKIIGSIVGT-  151 (168)
T ss_dssp             TT--SCHHHHHHHHHSSEEEEE-ESSCCHHHHHHHHHHEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC-
T ss_pred             cc--chhhhhcccccCCCceEE-eecCCHHHHHHHHHHhccC-CceEeccccc--CCCCCCHHHHHHCCcEEEEEeeCC-
Confidence            87  677888888887655554 5667778899999999997 9999999853  467888888887 99999998764 


Q ss_pred             cccccHHHHHHHHhcccc
Q 019139          326 KSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       326 ~~~~~~~~~~~~~~~g~~  343 (345)
                        +++++++++++++|++
T Consensus       152 --~~~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKV  167 (168)
T ss_dssp             --HHHHHHHHHHHHTTSC
T ss_pred             --HHHHHHHHHHHHhCCC
Confidence              4789999999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.1e-25  Score=185.75  Aligned_cols=165  Identities=24%  Similarity=0.316  Sum_probs=136.8

Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      ..+++.+|.+.|+..|+|+++ +..++++|++|+|+|+|++|++++|+||.+|+ ++++++.+++++++++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            346778888999999999998 67899999999999999999999999999999 7788999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      +.+  .+..    ....+++|++||++|.+.+++.++++++++ |+++.+|... +....+++..++. +++|.|++.++
T Consensus        81 ~~~--~~~~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          81 SRN--ADEM----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPA-TPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TTC--HHHH----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC
T ss_pred             Cch--hhHH----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCC-CCcccccHHHHHHCCcEEEEEeecC
Confidence            876  2211    112238999999999887799999999997 9999999854 4455778888777 99999998775


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                      .   +++++++++++++++
T Consensus       153 ~---~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 I---PETQEMLDFCAEHGI  168 (168)
T ss_dssp             H---HHHHHHHHHHHHHTC
T ss_pred             H---HHHHHHHHHHHHcCC
Confidence            4   789999999988764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.2e-25  Score=187.88  Aligned_cols=165  Identities=16%  Similarity=0.173  Sum_probs=135.0

Q ss_pred             CChhhhcccccchhhhhHH---HHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGA---VWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~a---l~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      +|+++||++++++.|||++   |.+..+.++|++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5889999999999999965   445688899999999987 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++|+++   .+.+.+....++++|+|||++|+.. +..++++|+++ |+++.+|.. .+...++++..++. +++|.|+.
T Consensus        80 vi~~~~---~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~-~g~~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLARED---VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLT-GGAEVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCC-SSSCCCCCSHHHHHTTCEEEECC
T ss_pred             eeecch---hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeecc-cCcccCCCHHHHHHCCcEEEEEe
Confidence            999865   2334444444459999999999876 99999999997 999999984 46678899999988 99999975


Q ss_pred             ecCCcccccHHHHHHHHh
Q 019139          322 FGGFKSRSQVPWLVDKYM  339 (345)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~  339 (345)
                      .. ....++..++++.+.
T Consensus       154 ~~-~~~~~~~~~~~~~la  170 (176)
T d1xa0a2         154 SV-YCPMDLRLRIWERLA  170 (176)
T ss_dssp             SS-SCCHHHHHHHHHHHH
T ss_pred             CC-cCCHHHHHHHHHHHh
Confidence            33 234466677776664

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=3.9e-25  Score=186.50  Aligned_cols=164  Identities=19%  Similarity=0.198  Sum_probs=139.9

Q ss_pred             cccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCc
Q 019139          173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK  251 (345)
Q Consensus       173 a~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~  251 (345)
                      ++++++++|||++|.+..++++|++|||+|+ |++|++++|+||..|+ +||++++++++.++++++|+++++++.+  +
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~   84 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V   84 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence            4577889999999999999999999999998 8999999999999999 9999999999999999999999999887  5


Q ss_pred             cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCC-----CCCceecChhhhcc-ccEEEEeeecC
Q 019139          252 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA-----SGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       252 ~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~-----~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      ++.+.+.+.+.+ ++|++||++|++ .++.++++++++ |+++.+|..+     ...+..+++..++. ++++.|++...
T Consensus        85 ~~~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          85 NSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             cHHHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence            667777777666 999999999974 599999999998 9999999632     12345667777777 99999998776


Q ss_pred             Ccc---cccHHHHHHHHhcc
Q 019139          325 FKS---RSQVPWLVDKYMKK  341 (345)
Q Consensus       325 ~~~---~~~~~~~~~~~~~g  341 (345)
                      +..   .+.++++++++++|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            642   24578888888876

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.6e-25  Score=181.72  Aligned_cols=131  Identities=16%  Similarity=0.183  Sum_probs=110.1

Q ss_pred             eeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCCCC
Q 019139           10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ   86 (345)
Q Consensus        10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~~~   86 (345)
                      |||+++++++++  +++++++.|+|++|||+|||.|+|||++|.+.+.|.++.. .+|+++|+|++|+|+++|.  +.++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999999876  7789999999999999999999999999999999987654 7899999999999999776  4799


Q ss_pred             CCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCCC
Q 019139           87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ  166 (345)
Q Consensus        87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~  166 (345)
                      +||+|+....                        ..|.. .                  .|+||||+++|++.++++|++
T Consensus        79 ~g~~v~~~~~------------------------~~g~~-~------------------~G~~Aey~~v~~~~vv~lP~~  115 (146)
T d1o89a1          79 AGQEVLLTGW------------------------GVGEN-H------------------WGGLAEQARVKGDWLVAMPQG  115 (146)
T ss_dssp             TTCEEEEECT------------------------TBTTT-B------------------CCSSBSEEEECGGGCEECCTT
T ss_pred             ceeeEEeecc------------------------cceec-C------------------CCcceeeeeeeeeeEEECCCC
Confidence            9999975432                        01111 2                  249999999999999999999


Q ss_pred             CChhhhcccccchhhhhHH
Q 019139          167 APLDKVCLLGCGVPTGLGA  185 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~a  185 (345)
                      +|+++||++++++.||+..
T Consensus       116 ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1         116 QAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             SCCEEECGGGHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9999999999888887653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=7.9e-26  Score=188.36  Aligned_cols=163  Identities=18%  Similarity=0.192  Sum_probs=137.2

Q ss_pred             ChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       168 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++.||.+.|++.|+|+++ +..++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4577889999999999998 56789999999999999999999999999999 899999999999999999999999886


Q ss_pred             CCCccHHHHHHhhcCCCccEEEEccCCHH--HHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecC
Q 019139          248 DHDKPIQQVLVDLTDGGVDYSFECIGNVS--VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGG  324 (345)
Q Consensus       248 ~~~~~~~~~~~~~~~gg~d~v~d~~g~~~--~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  324 (345)
                      +. .++.    +...+++|+++|++++..  .+..++++++++ |+++.+|....  +.+++...++. +++|.|++.++
T Consensus        80 ~~-~~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          80 EE-GDWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ--HEMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             GT-SCHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS--SCCEEECGGGCBSCEEEECCCCC
T ss_pred             ch-HHHH----HhhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccc--cccccHHHHHhCCcEEEEEeeCC
Confidence            52 2332    223348999999988643  467889999997 99999998654  44566666666 99999998875


Q ss_pred             CcccccHHHHHHHHhcccc
Q 019139          325 FKSRSQVPWLVDKYMKKVN  343 (345)
Q Consensus       325 ~~~~~~~~~~~~~~~~g~~  343 (345)
                      .   ++++++++++++|++
T Consensus       152 ~---~~~~e~l~li~~gkI  167 (168)
T d1piwa2         152 I---KELNQLLKLVSEKDI  167 (168)
T ss_dssp             H---HHHHHHHHHHHHTTC
T ss_pred             H---HHHHHHHHHHHhCCC
Confidence            4   789999999999986

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3e-25  Score=186.62  Aligned_cols=169  Identities=20%  Similarity=0.235  Sum_probs=140.0

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +|+++||+++++++|||++|.+..++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999999999999999988899999999999987 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc--ccEEEEeee
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT--GRVWKGTAF  322 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~~~  322 (345)
                      +++  +++.+.+++++++ ++|+++|++|++. +..++++++++ |+++.+|... .....++...+..  .+.+.+..+
T Consensus        80 ~~~--~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l  154 (179)
T d1qora2          80 YRE--EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSS-GAVTGVNLGILNQKGSLYVTRPSL  154 (179)
T ss_dssp             TTT--SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTT-CCCCCBCTHHHHHTTSCEEECCCH
T ss_pred             CCC--CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-Ceeeeccccc-CCccccchhhhhccceEEEEeeEE
Confidence            987  7899999999988 9999999999755 99999999997 9999999754 4455566555443  444433322


Q ss_pred             cC-Cccc----ccHHHHHHHHhcc
Q 019139          323 GG-FKSR----SQVPWLVDKYMKK  341 (345)
Q Consensus       323 ~~-~~~~----~~~~~~~~~~~~g  341 (345)
                      .. ....    +.+.++++++++|
T Consensus       155 ~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         155 QGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCc
Confidence            21 1122    3346677888877

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=1.4e-26  Score=191.79  Aligned_cols=151  Identities=18%  Similarity=0.156  Sum_probs=125.3

Q ss_pred             eeeeeeeccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC-CCCcccCcceeEEEEEeCCCCCCC
Q 019139            9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEV   85 (345)
Q Consensus         9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~v~~~   85 (345)
                      .|||+++++++..  +++++++.|+|++|||||||+|+|||++|++.+.|.++.. ..|.++|+|++|+|++  +.++.+
T Consensus         3 ~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~   80 (162)
T d1tt7a1           3 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRF   80 (162)
T ss_dssp             EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTC
T ss_pred             cEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--cccccc
Confidence            5999999987654  9999999999999999999999999999999999987654 6789999999999998  556789


Q ss_pred             CCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEEEcCC
Q 019139           86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP  165 (345)
Q Consensus        86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~  165 (345)
                      ++||+|+..+..                        .|.. .+                  |+|+||+++|++.++++|+
T Consensus        81 ~~g~~v~~~~~~------------------------~g~~-~~------------------G~~aey~~v~~~~l~~iP~  117 (162)
T d1tt7a1          81 AEGDEVIATSYE------------------------LGVS-RD------------------GGLSEYASVPGDWLVPLPQ  117 (162)
T ss_dssp             CTTCEEEEESTT------------------------BTTT-BC------------------CSSBSSEEECGGGEEECCT
T ss_pred             ccceeeEeeecc------------------------ceec-cc------------------cccceEEEecHHHEEECCC
Confidence            999999854321                        1111 22                  4999999999999999999


Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-Ch
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GT  205 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~  205 (345)
                      ++|+++||++++.++|||.++. ..+...+++|||.|+ |+
T Consensus       118 ~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         118 NLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            9999999999999999998653 334455577777776 53

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=7.7e-27  Score=195.76  Aligned_cols=157  Identities=20%  Similarity=0.124  Sum_probs=129.2

Q ss_pred             ceeeeeeeeccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCC----------CCCcccCcce
Q 019139            7 VITCKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----------LFPCILGHEA   71 (345)
Q Consensus         7 ~~~~~a~~~~~~~~~-----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~----------~~p~~~G~e~   71 (345)
                      +.+|||+++.++|+|     ++..++|.|+|++|||||||++++||++|+++++|.++..          ..|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            468999999999886     4445777778899999999999999999999998876431          5678999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeee
Q 019139           72 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ  151 (345)
Q Consensus        72 ~G~Vv~~G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~  151 (345)
                      +|+|++.|..+..++.||+|.....                              ..                  |+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~------------------------------~~------------------g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBS
T ss_pred             ccccccccccccccccccceecccc------------------------------cc------------------ccccc
Confidence            9999999999999999999974322                              22                  38999


Q ss_pred             eEEeecceEEEcCCCCChhhhcccccchhhhhHHHHh-hcCCCCCCEEEEEc-C-ChHHHHHHHH
Q 019139          152 YTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFG-L-GTVGLAVAEG  213 (345)
Q Consensus       152 ~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~-~~~~~~g~~VlI~G-a-g~vG~~a~q~  213 (345)
                      |+.+|+++++++|++++...+  +.+...|||+++.. ..++++|++|||.| + |++|++++|+
T Consensus       113 y~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             eeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            999999999999998754443  45577888888754 46799999999997 4 6799988764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=3.2e-25  Score=185.10  Aligned_cols=159  Identities=21%  Similarity=0.282  Sum_probs=127.8

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN  245 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~  245 (345)
                      +++++||+++++++|||+++ +..++++|++|+|+|+ |++|++++|+||.+|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            58899999999999999998 4589999999999997 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeec
Q 019139          246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG  323 (345)
Q Consensus       246 ~~~~~~~~~~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  323 (345)
                      +.+    ..   .+.+.+ ++|++||++|. . +++++++++++ |+++.+|.. .+...++++..++. ++++.|++++
T Consensus        79 ~~~----~~---~~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~-G~~v~~G~~-~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE----VP---ERAKAWGGLDLVLEVRGK-E-VEESLGLLAHG-GRLVYIGAA-EGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG----HH---HHHHHTTSEEEEEECSCT-T-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh----hh---hhhhccccccccccccch-h-HHHHHHHHhcC-CcEEEEeCC-CCCCCCccHHHHHHCCcEEEEEeCc
Confidence            754    22   233445 89999999884 4 89999999997 999999984 34567888888887 9999999877


Q ss_pred             CCccc-ccHHHHHHHH
Q 019139          324 GFKSR-SQVPWLVDKY  338 (345)
Q Consensus       324 ~~~~~-~~~~~~~~~~  338 (345)
                      .+... +.+++.++++
T Consensus       148 ~~~~~~~~~~~~~~~l  163 (171)
T d1iz0a2         148 PLLREGALVEEALGFL  163 (171)
T ss_dssp             HHTTCHHHHHHHHHHH
T ss_pred             ChhhhHHHHHHHHHHH
Confidence            55332 3334444444

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=7.8e-25  Score=185.78  Aligned_cols=172  Identities=13%  Similarity=0.149  Sum_probs=140.8

Q ss_pred             CChhhhcccccchhhhhHHHHhhcCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHhcCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNFGV  240 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~-Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~----~~~~~~~~~g~  240 (345)
                      +|+++||+++++++|||++|.+..++++|++|+|+ |+ |++|++++|+||.+|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58899999999999999999999999999999887 55 9999999999999999 788776543    44567789999


Q ss_pred             ceEeCCCCC-CccHHHHHHhhc---CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-cc
Q 019139          241 TEFVNPKDH-DKPIQQVLVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GR  315 (345)
Q Consensus       241 ~~~i~~~~~-~~~~~~~~~~~~---~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  315 (345)
                      ++++++++. ...+.+.+.+.+   ++++|++||++|++. +..++++|+++ |+++.+|..+ +.+.++++..++. ++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGMS-FQPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCCS-SCCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECCcc-CCCccCcHHHHHHCCc
Confidence            999987531 234455555543   448999999999765 89999999998 9999999753 5578899988887 99


Q ss_pred             EEEEeeecCCcc------cccHHHHHHHHhccc
Q 019139          316 VWKGTAFGGFKS------RSQVPWLVDKYMKKV  342 (345)
Q Consensus       316 ~i~g~~~~~~~~------~~~~~~~~~~~~~g~  342 (345)
                      ++.|++++.+..      .+.+.++++++++||
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999997764321      256889999999986

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.9e-23  Score=176.83  Aligned_cols=172  Identities=17%  Similarity=0.196  Sum_probs=132.1

Q ss_pred             CCChhhhcccccchhhhhHHHHhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHhcCCc
Q 019139          166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVT  241 (345)
Q Consensus       166 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g--~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~  241 (345)
                      +||+.+.| +++++.|||++|.+..++++|  ++|||+|+ |++|++++|+||.+|++.|+++++++++ .++++++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35666654 667899999999999999987  88999987 9999999999999999777777666655 4455789999


Q ss_pred             eEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCC-CceecC-------hhhhcc
Q 019139          242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEISTR-------PFQLVT  313 (345)
Q Consensus       242 ~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~-~~~~~~-------~~~~~~  313 (345)
                      .++|+.+  +++.+.+++.++.++|++||++|++. ++.++++++++ |+++.+|..++. ...+.+       ...++.
T Consensus        80 ~vi~~~~--~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYKT--GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETTS--SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeeccc--hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            9999987  78888999988779999999999755 99999999997 999999974320 011111       122334


Q ss_pred             -ccEEEEeeecCCcc--cccHHHHHHHHhccc
Q 019139          314 -GRVWKGTAFGGFKS--RSQVPWLVDKYMKKV  342 (345)
Q Consensus       314 -~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~  342 (345)
                       +++++|+.+..+.+  .+.++++.+++++||
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence             89999987765543  245688888999886

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=2.2e-22  Score=171.12  Aligned_cols=166  Identities=27%  Similarity=0.304  Sum_probs=140.2

Q ss_pred             hhhcccccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC
Q 019139          170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH  249 (345)
Q Consensus       170 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~  249 (345)
                      ++.+.+..+++|||+++ +.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            45677888999999997 6799999999999999999999999999999989999999999999999999999999877 


Q ss_pred             CccHHHHHHhhcCC-CccEEEEccCC---------------HHHHHHHHHHhccCCeEEEEeccCCCCCc----------
Q 019139          250 DKPIQQVLVDLTDG-GVDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGVAASGQE----------  303 (345)
Q Consensus       250 ~~~~~~~~~~~~~g-g~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~~~~~~~----------  303 (345)
                       .++.+.+.+++++ ++|++||++|.               +.+++.++++++++ |+++++|.+.+..+          
T Consensus        80 -~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          80 -TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             -SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             -cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence             6888999999988 99999999983               36799999999997 99999998654332          


Q ss_pred             -eecChhhhcc-ccEEEEeeecCCcccccHHHHHHHHhccc
Q 019139          304 -ISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMKKV  342 (345)
Q Consensus       304 -~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  342 (345)
                       ++++...++. +++|.+   +-.+.+..++++++++.++|
T Consensus       158 ~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             ceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence             3344445555 888754   33444566889999998775

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.4e-22  Score=167.97  Aligned_cols=159  Identities=14%  Similarity=0.159  Sum_probs=128.1

Q ss_pred             CChhhhcccccchhhhhHHHH---hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce
Q 019139          167 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE  242 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~---~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~  242 (345)
                      ||+.+||++++++.|||+++.   +.....++++|||+|+ |++|++++|+||.+|+ +||++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578999999999999997763   3344455679999987 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEee
Q 019139          243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTA  321 (345)
Q Consensus       243 ~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  321 (345)
                      ++++++.  ++.   +.+.....|.++|++|++. +...+++++++ |+++.+|... +...+++...++. +++|.|+.
T Consensus        80 vi~~~~~--~~~---~~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~~-~~~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDEF--AES---RPLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLAG-GFTLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGGS--SSC---CSSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTT-CSCCCCCSHHHHHHCCEEEECC
T ss_pred             ccccccH--HHH---HHHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeecccC-CccccccHHHHHHCCCeEEEEe
Confidence            9998762  221   2233347899999999865 99999999997 9999999854 5677888888887 99999986


Q ss_pred             ecCCcccccHHHHH
Q 019139          322 FGGFKSRSQVPWLV  335 (345)
Q Consensus       322 ~~~~~~~~~~~~~~  335 (345)
                      .... ..++..+++
T Consensus       152 ~~~~-~~~~~~~~~  164 (177)
T d1o89a2         152 SVMT-PPERRAQAW  164 (177)
T ss_dssp             SSSC-CHHHHHHHH
T ss_pred             cccC-CHHHHHHHH
Confidence            5433 334444443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.85  E-value=3e-22  Score=165.80  Aligned_cols=155  Identities=16%  Similarity=0.165  Sum_probs=122.3

Q ss_pred             cchhhhh---HHHHhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCcc
Q 019139          177 CGVPTGL---GAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP  252 (345)
Q Consensus       177 ~~~~ta~---~al~~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  252 (345)
                      +++.|||   ++|.+....+++++|||+|+ |++|++++|+||.+|+ +|+++.++++|.++++++|++.++++++.   
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~---   78 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDV---   78 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHH---
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccch---
Confidence            3455666   45556666778889999987 9999999999999999 89999999999999999999999887531   


Q ss_pred             HHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc-ccEEEEeeecCCcccccH
Q 019139          253 IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQV  331 (345)
Q Consensus       253 ~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~  331 (345)
                      ..+.+....++++|++||++|++. +..++++|+++ |+++.+|..+ +.+.++++..++. +++++|+.... ...++.
T Consensus        79 ~~~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~~-g~~~~~~~~~l~~k~~~i~G~~~~~-~~~~~~  154 (167)
T d1tt7a2          79 YDGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVSLLGIDSVY-CPMDVR  154 (167)
T ss_dssp             CSSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCEEEECCSSS-CCHHHH
T ss_pred             hchhhhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeeccC-CCcccCCHHHHHHCCcEEEEEecCC-CCHHHH
Confidence            111222333449999999999966 99999999997 9999999854 5688999998888 99999975432 234555


Q ss_pred             HHHHHHHh
Q 019139          332 PWLVDKYM  339 (345)
Q Consensus       332 ~~~~~~~~  339 (345)
                      .++++.+.
T Consensus       155 ~~~~~~l~  162 (167)
T d1tt7a2         155 AAVWERMS  162 (167)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHH
Confidence            66666654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.63  E-value=1.7e-15  Score=121.60  Aligned_cols=133  Identities=15%  Similarity=0.146  Sum_probs=99.1

Q ss_pred             eeeeeeeeccC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCccccccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 019139            8 ITCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   81 (345)
Q Consensus         8 ~~~~a~~~~~~--~~~----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~   81 (345)
                      ++.|+|++.+.  |.|    |++++.++|+|++||||||++|.++++......   . ..+...++..+++|+|++  |+
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~---~-~~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIAS---K-RLKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHG---G-GSCTTSBCCCCEEEEEEE--ES
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccc---c-ccccCCccccceEEEEEE--eC
Confidence            46788998875  433    999999999999999999999999976543222   1 222334566689999998  77


Q ss_pred             CCCCCCCCEEEecCcCCCCCCccccCCCCCCCCCcCCCCCCceecCCcccccccCCCccccccCcceeeeeEEeecceEE
Q 019139           82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA  161 (345)
Q Consensus        82 v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  161 (345)
                      .++|++||+|...                                                    ++|+||.+++.+.+.
T Consensus        76 ~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l~  103 (147)
T d1v3va1          76 NSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLE  103 (147)
T ss_dssp             CTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSCE
T ss_pred             CCcccCCCEEEEc----------------------------------------------------cCCEeEEEeccceee
Confidence            7899999999721                                                    289999999999999


Q ss_pred             EcCCCCCh-----hhhcccccchhhh-hHHHHhhcCCCCCCEEEE
Q 019139          162 KIDPQAPL-----DKVCLLGCGVPTG-LGAVWNTAKVEPGSIVAV  200 (345)
Q Consensus       162 ~iP~~l~~-----~~aa~~~~~~~ta-~~al~~~~~~~~g~~VlI  200 (345)
                      ++|+.++.     ...+++....+|| |..+...  .+.|++|++
T Consensus       104 kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1         104 KLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             ECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             EccccccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            99876533     2345566677775 4455433  467999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=3.5e-14  Score=100.34  Aligned_cols=73  Identities=18%  Similarity=0.213  Sum_probs=66.0

Q ss_pred             CChhhhcccccchhhhhHHHH---hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          167 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       167 l~~~~aa~~~~~~~ta~~al~---~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|+++|+.+++++.|||.+++   +....+++++|+|+|+ |++|.+++|+++.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999988764   4456789999999987 9999999999999999 89999999999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.89  E-value=1e-05  Score=64.35  Aligned_cols=97  Identities=21%  Similarity=0.213  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +..+|+|+|+|..|+.|++.|+.+|+ .|.+.|.+.++++.++......  ....++  +.+.+.+.     ..|++|.+
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~--~~l~~~~~-----~aDivI~a  102 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGA  102 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEEC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh--hhHHHhhc-----cCcEEEEe
Confidence            45789999999999999999999999 9999999999999887654322  221221  23333333     48999987


Q ss_pred             cCC-----HH-HHHHHHHHhccCCeEEEEeccCC
Q 019139          272 IGN-----VS-VMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       272 ~g~-----~~-~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +=-     +. .-+.+++.++++ ..+|.+....
T Consensus       103 alipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidq  135 (168)
T d1pjca1         103 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ  135 (168)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred             eecCCcccCeeecHHHHhhcCCC-cEEEEeecCC
Confidence            542     12 247788999998 9999998744

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.80  E-value=3.3e-05  Score=62.22  Aligned_cols=122  Identities=18%  Similarity=0.196  Sum_probs=81.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC------------------CccHHHH
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH------------------DKPIQQV  256 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~------------------~~~~~~~  256 (345)
                      ..+|+|+|+|..|+.|+..|+.+|+ +|.+.|.+.++++.+++++...+....+.                  .....+.
T Consensus        29 pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            4689999999999999999999999 99999999999999999987543211000                  0111222


Q ss_pred             HHhhcCCCccEEEEccCC-----HH-HHHHHHHHhccCCeEEEEeccCCCCCceecChh--hhcc-ccEEEEe
Q 019139          257 LVDLTDGGVDYSFECIGN-----VS-VMRAALECCHKGWGTSVIVGVAASGQEISTRPF--QLVT-GRVWKGT  320 (345)
Q Consensus       257 ~~~~~~gg~d~v~d~~g~-----~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~--~~~~-~~~i~g~  320 (345)
                      +.+... ..|+||-++--     |. .-+.+++.+++| ..+|.+....+ ..++.+-.  .+.. ++++.|.
T Consensus       108 l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqG-Gn~Ets~~~~~~~~~gV~~~gv  177 (183)
T d1l7da1         108 VLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAG-GNCPLSEPGKIVVKHGVKIVGH  177 (183)
T ss_dssp             HHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGT-CSSTTCCTTCEEEETTEEEECC
T ss_pred             HHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCC-CccccCcCCCEEEECCEEEEee
Confidence            333222 58999987542     12 247888999998 99999987443 33333222  1223 6666554

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.71  E-value=0.00014  Score=62.05  Aligned_cols=105  Identities=25%  Similarity=0.233  Sum_probs=73.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcC--CCccEE
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS  268 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~--gg~d~v  268 (345)
                      -+|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|..+ .++..+.+.+...  |++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED-ERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhcCCCCeE
Confidence            46889999998 9999999999999999 89999999998888888776543 23332 1222223332222  479999


Q ss_pred             EEccCCH-------------------------HHHHHHHHHhcc-CCeEEEEeccCC
Q 019139          269 FECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA  299 (345)
Q Consensus       269 ~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~G~~~  299 (345)
                      ++++|..                         ...+.+++.|++ ++|+|+.+++..
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            9988741                         223445555543 248999998654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.52  E-value=3.1e-05  Score=64.69  Aligned_cols=111  Identities=17%  Similarity=0.149  Sum_probs=76.4

Q ss_pred             cccchhhhhHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCCC
Q 019139          175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHD  250 (345)
Q Consensus       175 ~~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~~  250 (345)
                      +..+...|.  +.+..+++++++||.+|+| .|..++.+|+..|. +|++++..++-.+.+    +++|.+.+.....  
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--  134 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG--  134 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence            343444453  4577889999999999986 48888888888886 799999987655544    4577665443322  


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                       +..+-  ....++||.|+-+.+-......+++.|++| |+++..
T Consensus       135 -d~~~g--~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         135 -DGSKG--FPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             -CGGGC--CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             -ccccC--CcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence             11000  112248999988766555467888999998 999863

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.00023  Score=60.71  Aligned_cols=103  Identities=18%  Similarity=0.281  Sum_probs=68.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceE--eCCCCCCccHHHHHHhhcC--CCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF--VNPKDHDKPIQQVLVDLTD--GGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~--i~~~~~~~~~~~~~~~~~~--gg~d~  267 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++ ++....  .|..+ .++..+.+.+...  |++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            5889999998 9999999999999999 89999999988776654 332222  23322 1223333332222  47999


Q ss_pred             EEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ++++.|..                          ...+.++..|+.++|+++.+++.
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99998831                          22344555565434899999863

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.51  E-value=0.00039  Score=59.29  Aligned_cols=105  Identities=17%  Similarity=0.195  Sum_probs=70.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCCCCC--CccHHHHHHhhc--CCCccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDH--DKPIQQVLVDLT--DGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~--~~~~~~~~~~~~--~gg~d~  267 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....+...+.  +.+..+.+....  .+++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5789999988 9999999999999999 899999998876654 55665544322221  122222222221  258999


Q ss_pred             EEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          268 SFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       268 v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      ++++.|..                         ...+.++..|+..+|+|+.+++..
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            99998841                         224455566654349999998744

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.36  E-value=2.9e-05  Score=64.82  Aligned_cols=102  Identities=19%  Similarity=0.188  Sum_probs=71.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +.+...+++|++||-+|+|. |..++.+|+..|. ..|++++.+++..+.+++    .+.+.+.....   +..+.  ..
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~---d~~~~--~~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYYG--VP  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGC--CG
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC---chHHc--cc
Confidence            45788899999999999975 8888899998763 379999999988777753    34433321111   10000  01


Q ss_pred             cCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE
Q 019139          261 TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~  294 (345)
                      ..+.||+|+...+-....+.+++.|+++ |++++
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~  173 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV  173 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence            1237999998766555457788999998 99987

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.31  E-value=0.00059  Score=54.25  Aligned_cols=73  Identities=16%  Similarity=0.195  Sum_probs=55.0

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCc
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGV  265 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~  265 (345)
                      .+...+.++.+|+|+|+|+.+.+++..++..|+++|.++.|+.++.+.+. .++.. .++...             ...+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~-~~~~~~-------------~~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YINSLE-------------NQQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EESCCT-------------TCCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhh-hhhccc-------------ccch
Confidence            46666778889999999999999999999999888999999998866654 44443 222211             1257


Q ss_pred             cEEEEccC
Q 019139          266 DYSFECIG  273 (345)
Q Consensus       266 d~v~d~~g  273 (345)
                      |++++|+.
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            89998865

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00053  Score=58.05  Aligned_cols=102  Identities=26%  Similarity=0.390  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCce---EeCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~---~i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +|.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+ +++..+.+.+..  .|++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCcc
Confidence            4788999998 9999999999999999 899999999886655 3454432   233333 122222333222  25899


Q ss_pred             EEEEccCCH-------------------------HHHHHHHHHh--ccCCeEEEEeccC
Q 019139          267 YSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVA  298 (345)
Q Consensus       267 ~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~G~~  298 (345)
                      +++++.|..                         ...+.+++.+  +.+ |+|+.+++.
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS~  138 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGSV  138 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecch
Confidence            999988741                         2344555555  344 999999863

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.0014  Score=55.40  Aligned_cols=105  Identities=22%  Similarity=0.251  Sum_probs=69.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~--~~g  263 (345)
                      .|.+++|+|+ +++|...+......|+ +|+.+++++++.+.+    ++.|....   .|..+ .++..+.+...  ..|
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 9999998888889999 999999999886644    34554433   23333 12222223222  234


Q ss_pred             CccEEEEccCCH-------------------------HHHHHHHHHhc-cCCeEEEEeccCCC
Q 019139          264 GVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAAS  300 (345)
Q Consensus       264 g~d~v~d~~g~~-------------------------~~~~~~~~~l~-~~~G~~v~~G~~~~  300 (345)
                      .+|+++++.|..                         ...+.+++.+. .++|+++.+++...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            799999998852                         22344555553 32489999987654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.24  E-value=0.0014  Score=55.95  Aligned_cols=79  Identities=22%  Similarity=0.410  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~g  263 (345)
                      +|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|.+..   .|..+ +++..+.+....  .|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            5889999998 9999999999999999 899999998876654    33454432   23322 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            79999998873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.24  E-value=0.0011  Score=56.30  Aligned_cols=103  Identities=19%  Similarity=0.305  Sum_probs=68.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-----HhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|.+...   |..+ +++..+.+.+..  .
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            4789999998 9999999999999999 899999998775433     345654322   3332 122222233222  1


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCeEEEEeccC
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVA  298 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~G~~  298 (345)
                      |++|++++++|..                         ...+.+++.++. ++|+++.+++.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            4799999998841                         234455566642 23899999763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.00059  Score=57.69  Aligned_cols=79  Identities=20%  Similarity=0.286  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceE-eCCCCCCccHHHHHHhhcC--CCccEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYS  268 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~-i~~~~~~~~~~~~~~~~~~--gg~d~v  268 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++++..+ .|..+ +++..+.+.+...  +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHhcCCceEE
Confidence            4789999998 9999999999999999 8999999998877654 4555433 23333 1233333322221  479999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.20  E-value=0.0012  Score=56.24  Aligned_cols=79  Identities=25%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ +++..+.+.+..  .|++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCcc
Confidence            5789999998 9999999999999999 899999998876654 45654322   23322 123333332222  14799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++.+.|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999884

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.0014  Score=55.33  Aligned_cols=77  Identities=22%  Similarity=0.244  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....  +|..+  .+..+.+.+.. +++|+++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~-g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--WEATERALGSV-GPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTC-CCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHh-CCceEEE
Confidence            6899999998 9999999999999999 899999999887655 44443222  33333  22222222222 4899999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      ++.|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.15  E-value=0.0018  Score=55.07  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE---eCCCCCCccHH---HHHHhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF---VNPKDHDKPIQ---QVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~---i~~~~~~~~~~---~~~~~~~~  262 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+....   .|..+ +++..   +.+.+..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHHHhC
Confidence            5789999998 9999999999999999 8999999988766442    3333322   23332 12222   23333334


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      |.+|+++++.|.
T Consensus        85 g~idilvnnAG~   96 (259)
T d1xq1a_          85 GKLDILINNLGA   96 (259)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCcccccccccc
Confidence            579999999885

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.11  E-value=0.00047  Score=57.62  Aligned_cols=100  Identities=16%  Similarity=0.174  Sum_probs=68.7

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eE-eCCCCCCccHHHHHHhhcC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EF-VNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~-i~~~~~~~~~~~~~~~~~~  262 (345)
                      +.+...+++|++||-+|+| .|.+++.+|+. +. +|++++.+++..+.+++.-..  .+ +...+    ....  ....
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d----~~~g--~~~~  132 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGD----GTLG--YEEE  132 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC----GGGC--CGGG
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCc----hhhc--chhh
Confidence            4577889999999999997 47888888876 44 799999999988887653111  11 11111    1000  0112


Q ss_pred             CCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          263 GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       263 gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ++||.|+-+.+-+.....+++.|++| |++|..
T Consensus       133 ~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            47999887666555567788999998 999875

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.10  E-value=0.0013  Score=51.67  Aligned_cols=96  Identities=18%  Similarity=0.145  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.+.+|+|+|+|.+|...++.+...|+++++++.++.++. ++++++|.. .+.+.    ++.+.+.     .+|++|.|
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~----~~~~~l~-----~~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD----ELVDHLA-----RSDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG----GHHHHHH-----TCSEEEEC
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch----hHHHHhc-----cCCEEEEe
Confidence            4678999999999999999999999998899999987765 466777753 33332    3433333     59999999


Q ss_pred             cCCHH------HHHHHHHHhccCC-eEEEEeccC
Q 019139          272 IGNVS------VMRAALECCHKGW-GTSVIVGVA  298 (345)
Q Consensus       272 ~g~~~------~~~~~~~~l~~~~-G~~v~~G~~  298 (345)
                      ++++.      .+...+..-..+. =.++.++.+
T Consensus        92 tss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavP  125 (159)
T d1gpja2          92 TAAPHPVIHVDDVREALRKRDRRSPILIIDIANP  125 (159)
T ss_dssp             CSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred             cCCCCccccHhhhHHHHHhcccCCCeEEEeecCC
Confidence            98642      2333333322220 267888764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.06  E-value=0.0018  Score=54.93  Aligned_cols=79  Identities=22%  Similarity=0.264  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhh--cCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDL--TDG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~--~~g  263 (345)
                      ++.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|.+...   |..+ +++..+.+.+.  ..|
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence            4788899998 9999999998889999 899999998876544    345544322   3322 12232233222  125


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            89999998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.06  E-value=0.00058  Score=58.00  Aligned_cols=103  Identities=14%  Similarity=0.163  Sum_probs=68.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cC-CceEeCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-VTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g-~~~~i~~~~~~~~~~~~~~~  259 (345)
                      +....++++|++||=.|+|. |.++..+|++.|. .+|++++.+++..+.+++    ++ ...+-...   .++.+   .
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~---~  149 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIAD---F  149 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTT---C
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeec---c
Confidence            44678899999999999864 7888888888653 389999999998888764    22 22221111   11111   1


Q ss_pred             hcCCCccEEEEccCC-HHHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFECIGN-VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d~~g~-~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +..+.+|.|+-.... ...++.+.+.|+|| |+++++.
T Consensus       150 ~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         150 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             cccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            222379988754444 34589999999998 9998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.02  E-value=0.0015  Score=55.55  Aligned_cols=79  Identities=22%  Similarity=0.285  Sum_probs=56.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCcc---HHHHHHhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKP---IQQVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~---~~~~~~~~~~  262 (345)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.....   |..+ .++   +.+.+.+..+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence            6889999998 9999999999999999 999999998775544    345554322   3333 122   2233444455


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +.+|+++.+.|.
T Consensus        83 g~idilinnag~   94 (258)
T d1ae1a_          83 GKLNILVNNAGV   94 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcEEEeccccc
Confidence            679999998885

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.0023  Score=54.42  Aligned_cols=79  Identities=22%  Similarity=0.361  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCc-eE----eCCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT-EF----VNPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~-~~----i~~~~~~~~~~~~~~~~~--  261 (345)
                      +|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+.. .+    .|..+ +++..+.+.+..  
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 899999998886654    333321 22    23333 233333333222  


Q ss_pred             CCCccEEEEccCC
Q 019139          262 DGGVDYSFECIGN  274 (345)
Q Consensus       262 ~gg~d~v~d~~g~  274 (345)
                      .+++|+++.++|.
T Consensus        87 ~g~iD~lVnnAg~   99 (257)
T d1xg5a_          87 HSGVDICINNAGL   99 (257)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             cCCCCEEEecccc
Confidence            2479999999885

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.0015  Score=55.06  Aligned_cols=77  Identities=19%  Similarity=0.161  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE--eCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~--i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....  +|..+  .+..+.+.+.. |++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~-g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD--WDATEKALGGI-GPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHTTC-CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC--HHHHHHHHHHc-CCCeEEE
Confidence            5789999998 9999999999999999 899999998876555 44433222  23333  22222222221 4899999


Q ss_pred             EccCC
Q 019139          270 ECIGN  274 (345)
Q Consensus       270 d~~g~  274 (345)
                      ++.|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.99  E-value=0.00017  Score=60.79  Aligned_cols=99  Identities=20%  Similarity=0.224  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC----CccHHHHHHhhcCC-CccE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~----~~~~~~~~~~~~~g-g~d~  267 (345)
                      +|.+|||+|+ +++|.+.++.....|+ +|+.+++++.+..     .....+.....    .+.+...+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 9999999999999999 8998877654321     11111111110    01122233333334 7999


Q ss_pred             EEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          268 SFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       268 v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +++++|..                          ...+.++..++++ |+++.+++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            99998730                          1234445567887 9999998643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.001  Score=56.24  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=55.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.........+....+..+...+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEecc
Confidence            5789999988 9999999999999999 99999999988776655433333222221233333333332 4799999998


Q ss_pred             CC
Q 019139          273 GN  274 (345)
Q Consensus       273 g~  274 (345)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.96  E-value=0.0032  Score=50.88  Aligned_cols=76  Identities=21%  Similarity=0.229  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-----cCC-ceEeCCCCCCccHHHHHHhhcCCC
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGV-TEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-----~g~-~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      --+|.+++|+|+ |++|...+..+...|+ +|+.+.++.++.+.+.+     ... ....|..+     .+.+.+.. ++
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~   92 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-KG   92 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-TT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-cC
Confidence            347899999998 9999999999999999 89999999988665532     121 12233332     22333333 47


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++|++.|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999774

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.93  E-value=0.0035  Score=52.65  Aligned_cols=103  Identities=22%  Similarity=0.341  Sum_probs=69.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhcC--CCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLTD--GGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~~--gg~d  266 (345)
                      .|.++||+|+ +++|.+.++-+...|+ +|+.+.+++++.+.+ ++++.+...   |..+ +++..+.+.....  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~-~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCcc
Confidence            5789999998 9999999999999999 999999999876544 567764432   3332 2233333333222  4799


Q ss_pred             EEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccCC
Q 019139          267 YSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVAA  299 (345)
Q Consensus       267 ~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~~  299 (345)
                      +.+.+.|..                         ...+.++..+..+ +.++.++..+
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a  138 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVA  138 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCT
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccccc
Confidence            999987741                         1234445566776 7777776644

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.91  E-value=0.002  Score=54.82  Aligned_cols=79  Identities=16%  Similarity=0.228  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHH---HhhcC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVL---VDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~---~~~~~  262 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|..+ +++..+.+   .+..+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHHHhC
Confidence            5789999998 9999999999999999 899999998876544    33444332   23322 12222222   22333


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++++.|.
T Consensus        85 ~~idilvnnAG~   96 (259)
T d2ae2a_          85 GKLNILVNNAGI   96 (259)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCceEEEECCce
Confidence            479999999884

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.91  E-value=0.00017  Score=60.77  Aligned_cols=96  Identities=23%  Similarity=0.291  Sum_probs=61.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCC-----ccHHHHHHhh-cCCCccE
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD-----KPIQQVLVDL-TDGGVDY  267 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~-~~gg~d~  267 (345)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.++++++..      .........+..     ....+.+... ..+++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQ------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTT------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhc------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            357899998 9999999999999999 899998876532      111222211110     0111122222 2348999


Q ss_pred             EEEccCCH--------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +++++|..                          ...+.++..++++ |+++.+++.
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            99998730                          1234555667887 999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.90  E-value=0.0028  Score=54.21  Aligned_cols=103  Identities=20%  Similarity=0.245  Sum_probs=67.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHH----HHHhcCCceEeCCCC--CCccHHHHHHhhcC--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFD----RAKNFGVTEFVNPKD--HDKPIQQVLVDLTD--G  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~-~~~~~----~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~--g  263 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++ ++..+    .+++.|.+.....-+  .++++.+.+.....  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999998 9999999999999999 88887665 44333    334566655443222  12233333333222  4


Q ss_pred             CccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          264 GVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       264 g~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      ++|+++.+.|..                         ...+.++..|..+ |+++.+++.
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            799999988741                         2355666677886 888888653

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.89  E-value=0.0029  Score=54.77  Aligned_cols=103  Identities=13%  Similarity=0.200  Sum_probs=71.7

Q ss_pred             HHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCCCccHHHHHHh
Q 019139          184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       184 ~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      .-+.++.++++|++||=+|+| .|.++..+|+..|+ +|++++.+++..+.+    ++.|....+....  .+.     .
T Consensus        51 ~~~~~~l~l~~G~~VLDiGCG-~G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~-----~  121 (291)
T d1kpia_          51 KLALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGW-----E  121 (291)
T ss_dssp             HHHHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCG-----G
T ss_pred             HHHHHhcCCCCCCEEEEecCc-chHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hcc-----c
Confidence            345688999999999999986 35577888999999 999999999876655    3456543332211  111     1


Q ss_pred             hcCCCccEEEE-----ccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFE-----CIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d-----~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ...+.||.|+.     .++.          +..++.+.+.|+|+ |++++-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence            23458998774     3332          24578888999998 9998643

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.89  E-value=0.00088  Score=57.05  Aligned_cols=79  Identities=23%  Similarity=0.281  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|.....   |..+ +++..+.+.+..  .|++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence            4788999998 9999999999999999 899999998876544 567665432   3332 122333333222  14899


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999884

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.89  E-value=0.0011  Score=55.94  Aligned_cols=79  Identities=16%  Similarity=0.156  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceE---eCCCCCCccHHHHHHhhcC--CCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF---VNPKDHDKPIQQVLVDLTD--GGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~---i~~~~~~~~~~~~~~~~~~--gg~d  266 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+ +++..+.+.+...  +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCCe
Confidence            5789999998 9999999999999999 899999999887655 44543322   23332 1222333333222  4799


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      +++++.|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999885

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0022  Score=54.78  Aligned_cols=42  Identities=21%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      -+|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~   54 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   54 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            36899999998 9999999999999999 999999999887765

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.83  E-value=0.0023  Score=54.35  Aligned_cols=103  Identities=19%  Similarity=0.303  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHH----HHHhcCCceEeCCCCC--CccHHHHHHhhc--C
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFD----RAKNFGVTEFVNPKDH--DKPIQQVLVDLT--D  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~----~~~~~g~~~~i~~~~~--~~~~~~~~~~~~--~  262 (345)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.. .++++..+    .+++.|.+.....-+.  +++..+.+....  .
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            46899999998 9999999999999999 77764 55555433    3345676543322221  122222232222  2


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEecc
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +++|+++.+.|..                         ...+.++..++.+ |.++.+.+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            4799999998851                         2456667778886 88877765

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00023  Score=59.67  Aligned_cols=96  Identities=22%  Similarity=0.209  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHh----cCCce-----E-eCCCCCCccHHHHHHh
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTE-----F-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~~----~g~~~-----~-i~~~~~~~~~~~~~~~  259 (345)
                      .+++|++||-+|+| .|..++.+|+..| ..+|++++..++-.+.+++    .+...     + +...+    .   ...
T Consensus        73 ~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD----~---~~~  144 (224)
T d1i1na_          73 QLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD----G---RMG  144 (224)
T ss_dssp             TSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC----G---GGC
T ss_pred             ccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee----c---ccc
Confidence            78999999999996 4888888998876 3389999999987766642    22211     1 11111    0   000


Q ss_pred             hc-CCCccEEEEccCCHHHHHHHHHHhccCCeEEEEe
Q 019139          260 LT-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       260 ~~-~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .. .+.||.|+.+..-+.....+++.|++| |++++.
T Consensus       145 ~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         145 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            11 237999998766555567889999998 999873

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.80  E-value=0.039  Score=42.79  Aligned_cols=43  Identities=23%  Similarity=0.440  Sum_probs=38.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|.|+|+|.+|...+..++..|+ +|++.++++++.+.+++.|.
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~   44 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL   44 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhc
Confidence            58899999999998888889999 89999999999999888875

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.78  E-value=0.0057  Score=48.45  Aligned_cols=92  Identities=20%  Similarity=0.246  Sum_probs=60.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCC--------CccHHHHHHhhcCCCcc
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--------DKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~--------~~~~~~~~~~~~~gg~d  266 (345)
                      +.++.|+|+|.+|++.+..+...|+ +|+++++++++.+.+++.+..........        ..+..+.+     ...|
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            3689999999999999999999999 99999999999888877654322111100        01222222     2589


Q ss_pred             EEEEccCCHHHHHHHH----HHhccCCeEEEE
Q 019139          267 YSFECIGNVSVMRAAL----ECCHKGWGTSVI  294 (345)
Q Consensus       267 ~v~d~~g~~~~~~~~~----~~l~~~~G~~v~  294 (345)
                      ++|-++.... ....+    ..+.++ -.++.
T Consensus        75 ~iii~v~~~~-~~~~~~~i~~~l~~~-~~iv~  104 (184)
T d1bg6a2          75 VILIVVPAIH-HASIAANIASYISEG-QLIIL  104 (184)
T ss_dssp             EEEECSCGGG-HHHHHHHHGGGCCTT-CEEEE
T ss_pred             EEEEEEchhH-HHHHHHHhhhccCCC-CEEEE
Confidence            9998888654 44444    444454 44443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.74  E-value=0.0013  Score=56.58  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEe---CCCCCCccHHHHHHhhc--CCCcc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.....   |..+ .++..+.+.+..  -+++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCcc
Confidence            5789999998 9999999999999999 999999998887654 455543322   3322 122223332222  24799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.73  E-value=0.0076  Score=52.32  Aligned_cols=103  Identities=23%  Similarity=0.296  Sum_probs=65.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC---------hhHHHH----HHhcCCceEeCCCCCCccHHHHHHh
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID---------PKKFDR----AKNFGVTEFVNPKDHDKPIQQVLVD  259 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~---------~~~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~  259 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+..+++         ++..+.    ....+.....+..+. ++..+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSV-EAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCG-GGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchH-HHHHHHHHH
Confidence            5789999998 9999999999999999 88887643         222222    223444455555442 233333333


Q ss_pred             hc--CCCccEEEEccCCH-------------------------HHHHHHHHHhc-cCCeEEEEeccC
Q 019139          260 LT--DGGVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVA  298 (345)
Q Consensus       260 ~~--~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~-~~~G~~v~~G~~  298 (345)
                      ..  .|++|++++++|..                         ...+.++..|+ .++|+||.+++.
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence            22  24899999998841                         23444555553 224999999863

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0054  Score=48.49  Aligned_cols=78  Identities=12%  Similarity=0.135  Sum_probs=53.1

Q ss_pred             HHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cC---CceEeCCCCCCccHHHHHHhh
Q 019139          185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG---VTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       185 al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g---~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +|.+..-..+|.+|+|+|+|+.+.+++..+..+|. +|+.+.|+.++.+.+.+ +.   ....+...           +.
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~-----------~~   75 (170)
T d1nyta1           8 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD-----------EL   75 (170)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG-----------GG
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc-----------cc
Confidence            34333334578999999999999999999999999 79999999888665543 22   11111111           11


Q ss_pred             cCCCccEEEEccCC
Q 019139          261 TDGGVDYSFECIGN  274 (345)
Q Consensus       261 ~~gg~d~v~d~~g~  274 (345)
                      ....+|++++|+..
T Consensus        76 ~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCCCSEEEECCSC
T ss_pred             cccccceeeccccc
Confidence            12368999998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0015  Score=55.53  Aligned_cols=79  Identities=20%  Similarity=0.282  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DG  263 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~g  263 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+...   |..+ +++..+.+....  .|
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~-~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            6789999998 9999999999999999 899999998876543    445654332   2222 122222222221  14


Q ss_pred             CccEEEEccCC
Q 019139          264 GVDYSFECIGN  274 (345)
Q Consensus       264 g~d~v~d~~g~  274 (345)
                      ++|+++.+.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999884

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.67  E-value=0.0048  Score=49.21  Aligned_cols=102  Identities=12%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             HhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-E---------eCCCCC------C
Q 019139          187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F---------VNPKDH------D  250 (345)
Q Consensus       187 ~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-~---------i~~~~~------~  250 (345)
                      +....+.++.+||..|+| .|..++.+|+ .|+ +|++++.+++-.+.+++..... .         ......      -
T Consensus        13 ~~~l~~~~~~rvLd~GCG-~G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCG-KSQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTC-CSHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCc-CCHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            345678899999999997 4788888887 498 9999999999998887531110 0         000000      0


Q ss_pred             ccHHHHHHhhcCCCccEEEEccCC--------HHHHHHHHHHhccCCeEEEEec
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .++..    .....+|+|++...-        ...+..+.+.|+++ |++++..
T Consensus        90 ~~l~~----~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 FALTA----RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             SSSTH----HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ccccc----ccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            00000    011268988875331        23467788899998 9876654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.67  E-value=0.006  Score=51.71  Aligned_cols=104  Identities=20%  Similarity=0.322  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHH-----HhcCCceEe---CCCCCCccHHHHHHhhc--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-----KNFGVTEFV---NPKDHDKPIQQVLVDLT--  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~-~~~~~~-----~~~g~~~~i---~~~~~~~~~~~~~~~~~--  261 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     ...|.....   |..+ +++..+.+.+..  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            5788999988 9999999999999999 899988864 443322     234544332   2222 122222222222  


Q ss_pred             CCCccEEEEccCCH-------------------------HHHHHHHHHhcc-CCeEEEEeccCC
Q 019139          262 DGGVDYSFECIGNV-------------------------SVMRAALECCHK-GWGTSVIVGVAA  299 (345)
Q Consensus       262 ~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~G~~~  299 (345)
                      .|++|++++++|..                         ...+.+++.+.+ ++|+++.+++..
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  144 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH  144 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence            14799999998841                         223444555542 248999998643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.67  E-value=0.0037  Score=47.14  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=62.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +++|.|.|.+|...++.+...|. +|++++.++++.+.+++.+...++-.... .+.   +.+..-..+|.++-++++..
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~~-~~~---l~~a~i~~a~~vi~~~~~~~   76 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANATE-ENE---LLSLGIRNFEYVIVAIGANI   76 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTTC-TTH---HHHHTGGGCSEEEECCCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeeccc-chh---hhccCCccccEEEEEcCchH
Confidence            57888999999999999999999 89999999999999988886554432221 222   22222226888888877643


Q ss_pred             HHHHH---HHHhccCCeEEEEec
Q 019139          277 VMRAA---LECCHKGWGTSVIVG  296 (345)
Q Consensus       277 ~~~~~---~~~l~~~~G~~v~~G  296 (345)
                      ....+   ...+.+. .+++...
T Consensus        77 ~~~~~~~~~~~~~~~-~~iiar~   98 (134)
T d2hmva1          77 QASTLTTLLLKELDI-PNIWVKA   98 (134)
T ss_dssp             HHHHHHHHHHHHTTC-SEEEEEC
T ss_pred             HhHHHHHHHHHHcCC-CcEEeec
Confidence            22222   2233443 5655443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.66  E-value=0.0061  Score=47.88  Aligned_cols=98  Identities=11%  Similarity=-0.042  Sum_probs=62.6

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +.+|+|+|+|.+|..+++.+...|+ +|++++++.++.+.+.+-.....+..... .. ........ ...|.++.+...
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~-~~-~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV-ND-DAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT-TC-HHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc-cc-hhhhHhhh-hccceeEeeccc
Confidence            5789999999999999999999999 89999999998887765333333322221 11 11111111 246777777665


Q ss_pred             HHHHHHHHHHhccCCeEEEEecc
Q 019139          275 VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       275 ~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .........++..+ ..++.+..
T Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~   99 (182)
T d1e5qa1          78 TFHATVIKSAIRQK-KHVVTTSY   99 (182)
T ss_dssp             GGHHHHHHHHHHHT-CEEECSSC
T ss_pred             hhhhHHHHHHHhhc-cceeeccc
Confidence            55444455555564 56655543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.65  E-value=0.0027  Score=54.19  Aligned_cols=78  Identities=22%  Similarity=0.343  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCC---ceE--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV---TEF--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~---~~~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.   ...  .|..+ +++..+.+.+..  .|+
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999999999999 8999999998876553 3332   112  23332 123333332222  248


Q ss_pred             ccEEEEccC
Q 019139          265 VDYSFECIG  273 (345)
Q Consensus       265 ~d~v~d~~g  273 (345)
                      +|+++++.|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.64  E-value=0.0046  Score=53.28  Aligned_cols=100  Identities=13%  Similarity=0.138  Sum_probs=69.4

Q ss_pred             HHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhh
Q 019139          185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       185 al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      -+.++.++++|++||=+|+| .|.+++.+|+..|+ +|++++.+++..+.+++    .|...-+....  .++    . .
T Consensus        53 ~~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~----~-~  123 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGW----E-Q  123 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCG----G-G
T ss_pred             HHHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhh----h-c
Confidence            46688899999999999996 47888899999999 99999999998777654    33322111111  111    1 1


Q ss_pred             cCCCccEEEE-----ccCC---HHHHHHHHHHhccCCeEEEE
Q 019139          261 TDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       261 ~~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~  294 (345)
                      ..+.+|.++.     .++.   ...++.+.+.|+|+ |++++
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l  164 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLL  164 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEE
Confidence            2347887664     3333   24477788899998 99876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0032  Score=53.90  Aligned_cols=99  Identities=23%  Similarity=0.221  Sum_probs=62.6

Q ss_pred             CCEE-EEEcC-ChHHHHHHH-HHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccH---HHHHHhhc
Q 019139          195 GSIV-AVFGL-GTVGLAVAE-GAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPI---QQVLVDLT  261 (345)
Q Consensus       195 g~~V-lI~Ga-g~vG~~a~q-~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~---~~~~~~~~  261 (345)
                      |.+| ||+|+ +++|+..++ +++..|+ +|+.+.+++++.+.+    ++.+....   .|..+ .++.   .+.+.+..
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~-~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC-HHHHHHHHHHHHHhc
Confidence            5566 77888 999998765 5666688 899999998886544    33344322   23332 1222   22332222


Q ss_pred             CCCccEEEEccCCH-------------------------HHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       +++|+++++.|-.                         ...+.++..|+++ |+++.+++
T Consensus        80 -g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          80 -GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             -SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             -CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence             4799999998841                         1234445567886 99999876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.63  E-value=0.0066  Score=50.58  Aligned_cols=72  Identities=24%  Similarity=0.217  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEe-CCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i-~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.   ++.+...+. |..   .... .+.+.. +.+|+++.+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~---~~~~-~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLR---KDLD-LLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTT---TCHH-HHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchH---HHHH-HHHHHh-CCCcEEEec
Confidence            4789999998 9999999999999999 899999987654   445543322 222   2333 333322 479999999


Q ss_pred             cCC
Q 019139          272 IGN  274 (345)
Q Consensus       272 ~g~  274 (345)
                      .|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.63  E-value=0.0034  Score=54.04  Aligned_cols=103  Identities=13%  Similarity=0.196  Sum_probs=69.9

Q ss_pred             hHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHH
Q 019139          183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLV  258 (345)
Q Consensus       183 ~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~  258 (345)
                      +..+.+..++++|++||=+|+|. |.++..+++..|+ +|++++.+++..+.+++    .|....+....  .+.     
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~-----  111 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGW-----  111 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCG-----
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhh-----
Confidence            33466888999999999999863 4567778888899 99999999998777653    34422221111  111     


Q ss_pred             hhcCCCccEEEE-----ccCCH---HHHHHHHHHhccCCeEEEEe
Q 019139          259 DLTDGGVDYSFE-----CIGNV---SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       259 ~~~~gg~d~v~d-----~~g~~---~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ....+.+|.|+.     .++..   ..++.+.+.|+|+ |++++-
T Consensus       112 ~~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~  155 (280)
T d2fk8a1         112 EDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ  155 (280)
T ss_dssp             GGCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             hhhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence            112347887753     33332   4478888999998 999864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.012  Score=45.95  Aligned_cols=111  Identities=19%  Similarity=0.245  Sum_probs=76.7

Q ss_pred             HHHHhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          184 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       184 ~al~~~~~-~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .++.+... .-.|.+|+|.|.|-+|.-.++.++.+|+ +|++++..+-+.-.+..-|.. +.       .+.+.+     
T Consensus        12 ~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~~~~a~-----   77 (163)
T d1li4a1          12 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------TMDEAC-----   77 (163)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT-----
T ss_pred             HHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------ehhhhh-----
Confidence            34444333 4689999999999999999999999999 999999988664444444543 21       122221     


Q ss_pred             CCccEEEEccCCHHH-HHHHHHHhccCCeEEEEeccCCCCCceecChhhhcc
Q 019139          263 GGVDYSFECIGNVSV-MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT  313 (345)
Q Consensus       263 gg~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  313 (345)
                      ...|+++-++|.... -.+.++.|+++ ..+..+|..    +.+++...+..
T Consensus        78 ~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf----d~EId~~~L~~  124 (163)
T d1li4a1          78 QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF----DVEIDVKWLNE  124 (163)
T ss_dssp             TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS----TTSBCHHHHHH
T ss_pred             hhccEEEecCCCccchhHHHHHhccCC-eEEEEeccc----cceecHHHHhh
Confidence            247999999997543 46778899997 666666654    34555555443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.60  E-value=0.003  Score=53.56  Aligned_cols=78  Identities=19%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc--CCC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      |+.+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|.+...   |..+ +++..+.+....  .|+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            567799998 9999999999999999 899999998776544    345554332   3332 122322222221  258


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999884

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0015  Score=54.93  Aligned_cols=103  Identities=20%  Similarity=0.261  Sum_probs=70.4

Q ss_pred             hHHHHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--EeCCCCCCccHHHH
Q 019139          183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQV  256 (345)
Q Consensus       183 ~~al~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~--~i~~~~~~~~~~~~  256 (345)
                      +.+|....++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|...  -+...+    +.+ 
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d----~~~-   94 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND----AAG-   94 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----CTT-
T ss_pred             HHHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH----Hhh-
Confidence            34466888999999999999863 5677788888898 99999999987776654    45432  111111    110 


Q ss_pred             HHhhcCCCccEEEEcc-----C-CHHHHHHHHHHhccCCeEEEEe
Q 019139          257 LVDLTDGGVDYSFECI-----G-NVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       257 ~~~~~~gg~d~v~d~~-----g-~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                        ....+.+|+|+..-     . -...+..+.+.|+|+ |++++.
T Consensus        95 --~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~  136 (245)
T d1nkva_          95 --YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG  136 (245)
T ss_dssp             --CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred             --ccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence              02234899888531     1 245678888899998 998875

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.57  E-value=0.015  Score=43.68  Aligned_cols=75  Identities=21%  Similarity=0.309  Sum_probs=55.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh-cCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+.+ ++.. ++.-+.   .-.+.+.+..-..+|.++-++.+.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~---~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC---TKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT---TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc---cchhhhhhcChhhhhhhcccCCcH
Confidence            58999999999999999999999 99999999999887754 5654 332221   113344444334789999988876


Q ss_pred             H
Q 019139          276 S  276 (345)
Q Consensus       276 ~  276 (345)
                      .
T Consensus        77 ~   77 (132)
T d1lssa_          77 E   77 (132)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.55  E-value=0.0014  Score=55.62  Aligned_cols=74  Identities=18%  Similarity=0.093  Sum_probs=49.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      ++||+|+ +++|...+..+...|+ +|+..+++.++.+.++..    ....+.+..+ ...+.+.+.+.. |++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~-~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE-PAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS-HHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH-HHHHHHHHHHHc-CCCCEEEEC
Confidence            7899998 8999999999999999 899998888777666543    2222222222 122233333332 479999987


Q ss_pred             cC
Q 019139          272 IG  273 (345)
Q Consensus       272 ~g  273 (345)
                      .|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            66

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.54  E-value=0.0036  Score=52.75  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHhcCCceEe---CCCCCCccHHHHHHhhc--CCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~--~~~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~gg~  265 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.+++.|.....   |..+ +++..+.+.+..  .|++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999999999999999 89888876543  3445667754332   3332 122222322222  2489


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++++.|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.50  E-value=0.0017  Score=54.87  Aligned_cols=78  Identities=17%  Similarity=0.205  Sum_probs=52.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCceE----eCCCCCCcc---HHHHHHhhcCC-Cc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEF----VNPKDHDKP---IQQVLVDLTDG-GV  265 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~~~----i~~~~~~~~---~~~~~~~~~~g-g~  265 (345)
                      .+|||+|+ +++|.+.++.+...|+. +|+.+.+++++.+.+++.....+    +|..+ .++   +.+.+.+..+. ++
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGGCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCCCe
Confidence            78999998 99999988888778863 68888899988877776433222    23332 122   23333333344 69


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999883

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0062  Score=51.92  Aligned_cols=104  Identities=22%  Similarity=0.267  Sum_probs=73.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~  260 (345)
                      +....++++|++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    +|....+....  .+..   ..+
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~--~d~~---~~~  168 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDIS---EGF  168 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGG---GCC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe--cccc---ccc
Confidence            56788999999999999874 7888899998762 289999999998887753    55432222111  1110   112


Q ss_pred             cCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEec
Q 019139          261 TDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       261 ~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ....+|.|+--...+ ..++.+.+.|+|| |+++++-
T Consensus       169 ~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         169 DEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             cccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            223788877666654 4589999999998 9998764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.49  E-value=0.023  Score=41.37  Aligned_cols=92  Identities=14%  Similarity=0.028  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~--~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .|.+|+|+|+|.+|..-++.+...|+ +|++++...  +-..++++ +.-..+...-.+.++         .++++++-+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVEGPFDETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEESSCCGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeeccCCCHHHh---------CCCcEEeec
Confidence            46899999999999999999999999 777765433  22233332 222222211111121         268999999


Q ss_pred             cCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          272 IGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+.+..-.......++. |..|-+.-
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            99987556666777776 87777654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.49  E-value=0.011  Score=49.89  Aligned_cols=96  Identities=23%  Similarity=0.383  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      .++|++||=+|+|. |.+++.++ ..|+ +|++++.+++..+.+++    .|....+..    .+..+   ....+.||+
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~---~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA---ALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH---HGGGCCEEE
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc---cccccccch
Confidence            57899999999863 66666555 4788 89999999998877753    444332222    12222   133358999


Q ss_pred             EEEccCCH---HHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |+......   ..++.+.+.|+|+ |++++.|..
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence            99765543   2345667889998 999988764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0029  Score=53.61  Aligned_cols=103  Identities=22%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc----CCceE----eCCCCCCccHHHHHHhhcC-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF----VNPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~----g~~~~----i~~~~~~~~~~~~~~~~~~-  262 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +...+    .|..+ .++..+.+..... 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 8999999988766543 22    11111    23333 1223333332222 


Q ss_pred             -CCccEEEEccCCH-----------------HHHHHHHHHhcc-----CCeEEEEeccCC
Q 019139          263 -GGVDYSFECIGNV-----------------SVMRAALECCHK-----GWGTSVIVGVAA  299 (345)
Q Consensus       263 -gg~d~v~d~~g~~-----------------~~~~~~~~~l~~-----~~G~~v~~G~~~  299 (345)
                       |++|+++++.|..                 .....++..+.+     + |+|+.+++..
T Consensus        80 ~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~-g~Iv~isS~~  138 (254)
T d2gdza1          80 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLA  138 (254)
T ss_dssp             HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             cCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCC-cEEEeeccHh
Confidence             4899999998852                 123334444432     3 8899998643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.45  E-value=0.0037  Score=53.97  Aligned_cols=79  Identities=13%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-----HhcCCceEe---CCCCCCccHHHHHHhh--cC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTEFV---NPKDHDKPIQQVLVDL--TD  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-----~~~g~~~~i---~~~~~~~~~~~~~~~~--~~  262 (345)
                      .|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+     ++.|.....   |..+ .++....+...  ..
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC-hHHHHHHhhhhhhhc
Confidence            5789999998 9999999999999999 999999998765433     234443322   2222 12222222222  23


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            489999999884

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.43  E-value=0.0007  Score=56.49  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc---CC---CeEEEEcCChhHHHHHHhc---------CCceEeCCCCCCccHHH
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAA---GA---SRVIGIDIDPKKFDRAKNF---------GVTEFVNPKDHDKPIQQ  255 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~---G~---~~vi~~~~~~~~~~~~~~~---------g~~~~i~~~~~~~~~~~  255 (345)
                      .++++++||.+|+| .|..++.+++..   |.   .+|++++..++-.+.+++.         +...+.....   +..+
T Consensus        77 ~l~~g~~VLeIGtG-sGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~---d~~~  152 (223)
T d1r18a_          77 HLKPGARILDVGSG-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGRK  152 (223)
T ss_dssp             TCCTTCEEEEESCT-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGGG
T ss_pred             ccCCCCeEEEecCC-CCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec---cccc
Confidence            78999999999985 355555555544   42   2799999988766655321         2112211111   1000


Q ss_pred             HHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEEE-ecc
Q 019139          256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI-VGV  297 (345)
Q Consensus       256 ~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~-~G~  297 (345)
                      .  ....++||.|+-+.+-+...+.+++.|++| |+++. +|.
T Consensus       153 ~--~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg~  192 (223)
T d1r18a_         153 G--YPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVGP  192 (223)
T ss_dssp             C--CGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEESC
T ss_pred             c--cccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEec
Confidence            0  011238998888776555467888999998 99976 553

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.42  E-value=0.0028  Score=54.01  Aligned_cols=79  Identities=15%  Similarity=0.176  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHhcCCceEe---CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEFV---NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~-~~~----~~~~~g~~~~i---~~~~~~~~~~~~~~~~~--~  262 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+.++.+ +.+    .+++.|.+...   |..+ +++..+.+.+..  .
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            5789999988 9999999999999999 8888887643 332    33456654332   3332 122222233222  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      |++|+++++.|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            489999999884

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.42  E-value=0.0086  Score=50.22  Aligned_cols=100  Identities=17%  Similarity=0.237  Sum_probs=62.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~-~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      +.+||+|+ +++|.+.++.+...|+ +|+.. .+++++.+.+    ++.|.+..   .|..+ +++..+.+....  .|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCC
Confidence            46788888 9999999999999999 77765 4555554433    34554332   23332 122222222221  258


Q ss_pred             ccEEEEccCCH-------------------------HHHHHHHHHh--ccCCeEEEEeccC
Q 019139          265 VDYSFECIGNV-------------------------SVMRAALECC--HKGWGTSVIVGVA  298 (345)
Q Consensus       265 ~d~v~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~G~~  298 (345)
                      +|+++++.|..                         ...+.+++.|  +.+ |+|+.+++.
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcCh
Confidence            99999998841                         2234455555  354 999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0047  Score=53.58  Aligned_cols=80  Identities=14%  Similarity=0.235  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hc--------CCceE---eCCCCCCccHHHHHHh
Q 019139          193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--------GVTEF---VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       193 ~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~--------g~~~~---i~~~~~~~~~~~~~~~  259 (345)
                      -+|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++        +...+   .|..+ +++..+.+.+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHHHH
Confidence            46899999998 9999999999999999 8999999987765432 21        22222   23332 1223333332


Q ss_pred             hc--CCCccEEEEccCC
Q 019139          260 LT--DGGVDYSFECIGN  274 (345)
Q Consensus       260 ~~--~gg~d~v~d~~g~  274 (345)
                      ..  .|++|+++++.|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            22  2479999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.40  E-value=0.0044  Score=52.60  Aligned_cols=78  Identities=21%  Similarity=0.334  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hc--CCceE---eCCCCCCccHHHHHHhhcC-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NF--GVTEF---VNPKDHDKPIQQVLVDLTD-  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~--g~~~~---i~~~~~~~~~~~~~~~~~~-  262 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.  +....   .|..+ +++..+.+.+... 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence            4789999998 9999999999999999 8999999988765442    12  22221   23333 1233333332221 


Q ss_pred             -CCccEEEEccC
Q 019139          263 -GGVDYSFECIG  273 (345)
Q Consensus       263 -gg~d~v~d~~g  273 (345)
                       |++|+++++.|
T Consensus        81 ~G~iDiLVnnAG   92 (258)
T d1iy8a_          81 FGRIDGFFNNAG   92 (258)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence             47999999887

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.38  E-value=0.0025  Score=54.22  Aligned_cols=79  Identities=22%  Similarity=0.241  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-----HhcCCceE---eCCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTEF---VNPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~  262 (345)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|.+..   .|..+ +++..+.+.+..  .
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            4789999998 9999999999999999 899999887654332     34555432   23332 122322332221  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      |++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            589999998873

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.34  E-value=0.0077  Score=50.77  Aligned_cols=84  Identities=19%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHhcCCceEe---CCCCCCccHHHHHH
Q 019139          190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEFV---NPKDHDKPIQQVLV  258 (345)
Q Consensus       190 ~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~-------~~~~~~~g~~~~i---~~~~~~~~~~~~~~  258 (345)
                      ...+|+.++||+|+ |++|...+..+...|+++|+.+.++...       .+.++..|....+   |..+ ..+..+.+.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d-~~~~~~~~~   82 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLG   82 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch-HHHHHHhhc
Confidence            35788999999998 9999999988888898667777665321       2233456664332   3322 122333333


Q ss_pred             hhcCC-CccEEEEccCC
Q 019139          259 DLTDG-GVDYSFECIGN  274 (345)
Q Consensus       259 ~~~~g-g~d~v~d~~g~  274 (345)
                      ..... ++|.++.+.|.
T Consensus        83 ~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          83 GIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             ccccccccccccccccc
Confidence            33333 78999998884

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0012  Score=55.21  Aligned_cols=99  Identities=19%  Similarity=0.215  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCccHHHHHHhhcCCCccEEE-
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSF-  269 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~~~~~~~gg~d~v~-  269 (345)
                      .+|.+||-+|+| .|..+..+++..+. ++++++.++.-.+.+++.....  -+....  .+.......+..+.+|.++ 
T Consensus        52 ~~g~~VLdIGcG-~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          52 SKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK--GLWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE--SCHHHHGGGSCTTCEEEEEE
T ss_pred             cCCCeEEEeecc-chHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc--ccccccccccccccccceee
Confidence            678899999986 47788888886665 8999999999888887543211  011111  2233334445556898774 


Q ss_pred             EccCC----------HHHHHHHHHHhccCCeEEEEec
Q 019139          270 ECIGN----------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       270 d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |.+..          ...+..+.+.|+|| |+++...
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~~  163 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  163 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCC-cEEEEEe
Confidence            65443          12456788899998 9998653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0021  Score=52.36  Aligned_cols=97  Identities=18%  Similarity=0.130  Sum_probs=61.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .++|+|+|+ |.+|...+..+...|+ +|++++++.++.......+.+.+. -+-  .+. +.+.+.. .+.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD~--~d~-~~l~~al-~~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GDV--LQA-ADVDKTV-AGQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SCT--TSH-HHHHHHH-TTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-ccc--cch-hhHHHHh-cCCCEEEEEec
Confidence            368999998 9999999999999999 899999988875443334443322 111  121 2233322 26899999988


Q ss_pred             CH----------HHHHHHHHHhccC-CeEEEEecc
Q 019139          274 NV----------SVMRAALECCHKG-WGTSVIVGV  297 (345)
Q Consensus       274 ~~----------~~~~~~~~~l~~~-~G~~v~~G~  297 (345)
                      ..          .....+++.++.. -.+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            52          1133445555442 147777754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.30  E-value=0.0025  Score=54.08  Aligned_cols=104  Identities=13%  Similarity=0.072  Sum_probs=60.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE----eCCCCCCccHHHHHHhhcC--
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF----VNPKDHDKPIQQVLVDLTD--  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~----i~~~~~~~~~~~~~~~~~~--  262 (345)
                      .|.+|||+|+ +++|.+.+......|+ +|+.+.++.++.+.++    ..+-..+    .|.......+.+.+.....  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4789999988 9999999999999999 6666655444433332    2222222    2222111123222332222  


Q ss_pred             CCccEEEEccCCH-----------------HHHHHHHHHhc-----cCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGNV-----------------SVMRAALECCH-----KGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~~-----------------~~~~~~~~~l~-----~~~G~~v~~G~~~  299 (345)
                      +++|+++.++|..                 ...+.+++.+.     ++ |+++.+++..
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~~  140 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSVT  140 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEechh
Confidence            4799999999852                 12344444442     34 8999887643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.28  E-value=0.0041  Score=52.56  Aligned_cols=79  Identities=20%  Similarity=0.233  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCC--ce-E--eCCCCCCccHHHHHHhhc--CCC
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--TE-F--VNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~--~~-~--i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.  .. .  .|..+ +++..+.+....  .|+
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence            4789999998 9999999999999999 8999999988776553 3322  11 1  23322 122222222221  248


Q ss_pred             ccEEEEccCC
Q 019139          265 VDYSFECIGN  274 (345)
Q Consensus       265 ~d~v~d~~g~  274 (345)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999884

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.25  E-value=0.0041  Score=53.28  Aligned_cols=79  Identities=18%  Similarity=0.246  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc--eE----eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--EF----VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~--~~----i~~~~~~~~~~~~~~~~~-  261 (345)
                      +|.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.++    +.+..  .+    .|..+ +.+..+.+.+.. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence            5789999998 9999999999999999 8999999988766542    33331  11    23333 122222233222 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .|++|+++++.|.
T Consensus        81 ~~G~iDilVnnAG~   94 (274)
T d1xhla_          81 KFGKIDILVNNAGA   94 (274)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCceEEEeeccc
Confidence             1479999998773

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.24  E-value=0.0062  Score=51.47  Aligned_cols=76  Identities=20%  Similarity=0.191  Sum_probs=51.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceE---eCCCCCCccHHHHHHhhc--CCCcc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~---i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.|.+..   .|..+ +++..+.+.+..  -|++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence            4689988 9999999998888999 899999998876644    34555433   23332 122222333222  25899


Q ss_pred             EEEEccCC
Q 019139          267 YSFECIGN  274 (345)
Q Consensus       267 ~v~d~~g~  274 (345)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.24  E-value=0.009  Score=49.40  Aligned_cols=93  Identities=16%  Similarity=0.160  Sum_probs=67.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      .+++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++-+....+....  .++     .+..+.+|+|+..
T Consensus        40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDL-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSC-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccc--ccc-----ccccccccceeee
Confidence            4577899989997 5888888876 588 8999999999999999877665554332  111     1223589998864


Q ss_pred             cC------C-HHHHHHHHHHhccCCeEEEEe
Q 019139          272 IG------N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       272 ~g------~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..      + ...+..+.+.|++| |.+++.
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            33      2 23467888999998 988753

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.23  E-value=0.0069  Score=50.21  Aligned_cols=100  Identities=17%  Similarity=0.210  Sum_probs=67.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE-eCCCCCCccHHHHHHhh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~-i~~~~~~~~~~~~~~~~  260 (345)
                      +.+..++++|++||=+|+| .|.++..+++. +. +|++++.++.-.+.++    ..+.+.+ +...+ ..++     .+
T Consensus         8 l~~~~~~~~~~rILDiGcG-tG~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d-~~~~-----~~   78 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAG-AGHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT-AESL-----PF   78 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB-TTBC-----CS
T ss_pred             HHHHhCCCCCCEEEEeCCc-CcHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccccc-cccc-----cc
Confidence            5688899999999999996 37777777774 66 8999999988766654    3343322 11111 0111     12


Q ss_pred             cCCCccEEEEccC-----C-HHHHHHHHHHhccCCeEEEEe
Q 019139          261 TDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       261 ~~gg~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..+.+|+|+..-.     . ...++.+.+.|+|+ |+++++
T Consensus        79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~  118 (234)
T d1xxla_          79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLV  118 (234)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEE
Confidence            3357999886433     2 24578888999998 998875

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0022  Score=56.36  Aligned_cols=105  Identities=20%  Similarity=0.244  Sum_probs=67.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----cC-----------CceE-eCCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-----------VTEF-VNPKD  248 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~g-----------~~~~-i~~~~  248 (345)
                      +....++++|++||=.|+|. |.+++.+|++.|. .+|++++.+++..+.+++    ++           .+.+ +...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            55778899999999999864 8899999998873 389999999998887753    11           1111 11111


Q ss_pred             CCccHHHHHHhhcCCCccEEE-EccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          249 HDKPIQQVLVDLTDGGVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       249 ~~~~~~~~~~~~~~gg~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      . .++   ...+..+.+|.|| |.......+.++.+.|+|| |+++++-
T Consensus       169 i-~~~---~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I-SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T-TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h-hhc---ccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            0 010   0112223688666 5433334589999999998 9998753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.21  E-value=0.004  Score=53.25  Aligned_cols=79  Identities=16%  Similarity=0.226  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc--e----EeCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E----FVNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~--~----~i~~~~~~~~~~~~~~~~~-  261 (345)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.    +.+..  .    ..|..+ +++..+.+.... 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            5788999998 9999999999999999 8999999988766543    33321  1    223333 122222232222 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .|++|+++++.|.
T Consensus        82 ~~g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCceEEEeCCcc
Confidence             2479999998774

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.18  E-value=0.0042  Score=52.81  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCc--eE----eCCCCCCccHHHHHHhhc-
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--EF----VNPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~--~~----i~~~~~~~~~~~~~~~~~-  261 (345)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..  .+    .|..+ +++..+.+.+.. 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            5788999998 9999999999999999 8999999988766542    33321  11    23333 122222333222 


Q ss_pred             -CCCccEEEEccCC
Q 019139          262 -DGGVDYSFECIGN  274 (345)
Q Consensus       262 -~gg~d~v~d~~g~  274 (345)
                       .|++|+++++.|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence             2489999999873

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.012  Score=49.94  Aligned_cols=104  Identities=19%  Similarity=0.237  Sum_probs=71.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHh----c---CCceEeCCCCCCccHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----F---GVTEFVNPKDHDKPIQQVL  257 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~----~---g~~~~i~~~~~~~~~~~~~  257 (345)
                      +....+++||++||=.|+| .|.++..+|++.|. .+|++++.+++..+.+++    +   ..+.+....   .+..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~---~d~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SDLAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SCGGG--
T ss_pred             HHHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe---ccccc--
Confidence            5678899999999999986 48888999998863 389999999998888764    1   112221111   11110  


Q ss_pred             HhhcCCCccEEEEccCCH-HHHHHHHHHhccCCeEEEEec
Q 019139          258 VDLTDGGVDYSFECIGNV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       258 ~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+..+.+|.||-....+ ..+..+.+.|+++ |+++++-
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            012234799776555543 4588999999998 9998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.021  Score=45.36  Aligned_cols=98  Identities=13%  Similarity=0.150  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----Hhc----CC-ceEeCCCCCCccHHHHHHhhcCC
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNF----GV-TEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~----g~-~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      -.+.+|+|+|+|+.+.+++..+...|.+.++.+.++.++.+.+    +++    .. ....+..+ ...+.+.+     .
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~   89 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEAL-----A   89 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHH-----H
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-ccchhhhh-----c
Confidence            3678999999999999999999999998999999887655433    222    11 11222322 01111111     1


Q ss_pred             CccEEEEccCCHH------HHHHHHHHhccCCeEEEEecc
Q 019139          264 GVDYSFECIGNVS------VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       264 g~d~v~d~~g~~~------~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .+|++++|+.-..      .+..-+..++++ ..++.+-.
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~Y  128 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECVY  128 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECCC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhhc
Confidence            5899999976211      011113456675 77777743

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.03  E-value=0.013  Score=47.97  Aligned_cols=100  Identities=20%  Similarity=0.214  Sum_probs=68.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE--eCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF--VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~--i~~~~~~~~~~~~~~~  259 (345)
                      +.+..+++++++||=+|+| .|.++..+++. |+ +|++++.+++-.+.++    ..+.+.+  +..+.  .++     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~--~~l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA--EQM-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC---CC-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc--ccc-----c
Confidence            5678899999999999987 57777777654 67 8999999998776664    3444322  21111  111     1


Q ss_pred             hcCCCccEEEEccC-----CH-HHHHHHHHHhccCCeEEEEec
Q 019139          260 LTDGGVDYSFECIG-----NV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       260 ~~~gg~d~v~d~~g-----~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +..+.+|+|+..-.     .+ ..+..+.+.|+|+ |++++.-
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            23347999986422     32 4578899999998 9998864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.00  E-value=0.016  Score=48.28  Aligned_cols=101  Identities=14%  Similarity=0.163  Sum_probs=63.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhHHHHH----HhcCCceEe---CCCCCCccHHHHHHhhc-
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRA----KNFGVTEFV---NPKDHDKPIQQVLVDLT-  261 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~------~vi~~~~~~~~~~~~----~~~g~~~~i---~~~~~~~~~~~~~~~~~-  261 (345)
                      .|||+|+ +++|.+.+..+...|++      .|+..++++++.+.+    ++.|.....   |..+ +++..+.+.+.. 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence            4788998 99999999888888983      278888888876644    334543322   3333 122222222221 


Q ss_pred             -CCCccEEEEccCCH-------------------------HHHHHHHHHhc--cCCeEEEEeccCC
Q 019139          262 -DGGVDYSFECIGNV-------------------------SVMRAALECCH--KGWGTSVIVGVAA  299 (345)
Q Consensus       262 -~gg~d~v~d~~g~~-------------------------~~~~~~~~~l~--~~~G~~v~~G~~~  299 (345)
                       .|++|+++++.|..                         ...+.++..++  .+ |+++.+++..
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-G~Ii~isS~~  146 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS-GHIFFITSVA  146 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCGG
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC-CceEEEechh
Confidence             24899999998841                         22344555553  44 9999998643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.96  E-value=0.051  Score=42.01  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=38.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+++.++.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~   45 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAE   45 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhh
Confidence            47889999999998888888999 899999999999888887764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.81  E-value=0.019  Score=48.25  Aligned_cols=79  Identities=24%  Similarity=0.365  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+...++++..+.++    ..+....+  |..+ +++..+.+....  .
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCC-HHHHHHHHHHHHHhc
Confidence            5789999998 5  799999999999999 8888888876544442    33433333  2222 122222222211  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      |++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998863

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.72  E-value=0.018  Score=45.95  Aligned_cols=104  Identities=17%  Similarity=0.217  Sum_probs=66.1

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +....+++++++||=+|+| .|..++.+|+. +. +|++++.+++..+.+++    +|...-+....  .+..+..  ..
T Consensus        25 il~~l~~~~g~~VLDiGcG-sG~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~--gda~~~~--~~   97 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCG-TGGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME--GDAPEAL--CK   97 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCT-TSHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE--SCHHHHH--TT
T ss_pred             HHHhcCCCCCCEEEEEECC-eEccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE--Cchhhcc--cc
Confidence            3456788999999999885 25556666654 44 89999999988777753    55421111111  1222222  12


Q ss_pred             CCCccEEEEccCC---HHHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...+|.++.....   ...++.+.+.|+++ |++++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~~  135 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEee
Confidence            2379988865432   34477778889998 99887653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.71  E-value=0.027  Score=43.74  Aligned_cols=102  Identities=27%  Similarity=0.336  Sum_probs=73.6

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      -+-.|.+++|.|.|-+|.-.++-++.+|+ +|++++.++-+.=.+.--|.. +.       ...+.+     ...|+++-
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~-------~~~~a~-----~~aDi~vT   84 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------TLDEIV-----DKGDFFIT   84 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------CHHHHT-----TTCSEEEE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC-------chhHcc-----ccCcEEEE
Confidence            35689999999999999999999999999 999999988664334333432 21       222222     25799999


Q ss_pred             ccCCHHH-HHHHHHHhccCCeEEEEeccCCCCCceecChhhh
Q 019139          271 CIGNVSV-MRAALECCHKGWGTSVIVGVAASGQEISTRPFQL  311 (345)
Q Consensus       271 ~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  311 (345)
                      ++|..+. -..-++.++++ ..+..+|..    +.+++...+
T Consensus        85 aTGn~~vI~~~h~~~MKdg-aIl~N~GHf----d~EIdv~~L  121 (163)
T d1v8ba1          85 CTGNVDVIKLEHLLKMKNN-AVVGNIGHF----DDEIQVNEL  121 (163)
T ss_dssp             CCSSSSSBCHHHHTTCCTT-CEEEECSST----TTSBCHHHH
T ss_pred             cCCCCccccHHHHHHhhCC-eEEEecccc----chhhhhHHH
Confidence            9998664 46678999997 777777764    345555444

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.70  E-value=0.0073  Score=51.63  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=69.2

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-E-eCCCCCCccHHHHHHh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F-VNPKDHDKPIQQVLVD  259 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~-~-i~~~~~~~~~~~~~~~  259 (345)
                      |.....++++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++    .|... + +...+. .++     .
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~-~~l-----~  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEI-----P  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSC-----S
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc-ccc-----c
Confidence            4456788999999999997 47778888888898 89999999887766653    34321 1 111110 111     1


Q ss_pred             hcCCCccEEEEcc-----CC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          260 LTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       260 ~~~gg~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +..+.+|+|+-.-     .. ...+..+.+.|+|+ |++++...
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            2234799987532     22 24578888999998 99887643

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.075  Score=46.25  Aligned_cols=104  Identities=14%  Similarity=0.152  Sum_probs=68.0

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-----------CC----ceEeCCCCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-----------GV----TEFVNPKDHD  250 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-----------g~----~~~i~~~~~~  250 (345)
                      +.+..+++++++|+=+|+| .|..+.++|+..++.++++++.+++..+.+++.           |.    -.++..+-..
T Consensus       143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            5578889999999999987 588899999999987899999999877766431           11    1122111111


Q ss_pred             ccHHHHHHhhcCCCccEEEEccC--CH---HHHHHHHHHhccCCeEEEEec
Q 019139          251 KPIQQVLVDLTDGGVDYSFECIG--NV---SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       251 ~~~~~~~~~~~~gg~d~v~d~~g--~~---~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+.+...     .+|+|+-..-  .+   ..+...++.|++| |++|..-
T Consensus       222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            22222222     2577774211  22   2356677788997 9998764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.56  E-value=0.076  Score=41.18  Aligned_cols=44  Identities=27%  Similarity=0.612  Sum_probs=39.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|+|+|+|.+|...+..++..|. .+|++++++++.++.+++.+.
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~   47 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI   47 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc
Confidence            68999999999999988888885 379999999999999998876

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.54  E-value=0.044  Score=45.27  Aligned_cols=97  Identities=16%  Similarity=0.221  Sum_probs=64.9

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +......++..+||=+|+|. |..+..+++ .|+ +|++++.+++-.+.+++    .+....+...+        +.++.
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--------~~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--------VLEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--------GGGCC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh--------hhhcc
Confidence            44555667788999999975 778777776 688 89999999988777754    23322121111        12222


Q ss_pred             C-CCccEEEEccCC------H---HHHHHHHHHhccCCeEEEE
Q 019139          262 D-GGVDYSFECIGN------V---SVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       262 ~-gg~d~v~d~~g~------~---~~~~~~~~~l~~~~G~~v~  294 (345)
                      . +.+|+|+...+.      +   ..++.+.+.|+|+ |.+++
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2 379998875332      1   3477788899998 98875

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.51  E-value=0.034  Score=50.00  Aligned_cols=105  Identities=19%  Similarity=0.191  Sum_probs=68.9

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc---------------CCceEeCCCC-C
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---------------GVTEFVNPKD-H  249 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~---------------g~~~~i~~~~-~  249 (345)
                      +.+..+++++++++=+|+| +|..+.++|+..|+..+++++.++...+.+++.               +........+ .
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            5578899999999888997 699999999999987899999999877766532               1111111111 1


Q ss_pred             CccHHHHHHhhcCCCccEEEEcc--CCH---HHHHHHHHHhccCCeEEEEec
Q 019139          250 DKPIQQVLVDLTDGGVDYSFECI--GNV---SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       250 ~~~~~~~~~~~~~gg~d~v~d~~--g~~---~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..+..+..  +  ..+|+++-..  -.+   ..+..+++.|++| |+++..-
T Consensus       287 ~~~~~d~~--~--~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRVAEL--I--PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHHHHH--G--GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hccccccc--c--ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            11111111  1  2467777431  222   3466777889997 9999764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.51  E-value=0.0064  Score=50.83  Aligned_cols=75  Identities=20%  Similarity=0.182  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhc--CCCccEEEE
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE  270 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d~v~d  270 (345)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    ....|..+ +++..+.+.+..  .+++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~----~~~~Dv~~-~~~v~~~~~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF----GVEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE----EEECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCce----EEEEecCC-HHHHHHHHHHHHHhcCCceEEEe
Confidence            5789999998 9999999999999999 9999998876543211    12233333 122222222222  147999999


Q ss_pred             ccCC
Q 019139          271 CIGN  274 (345)
Q Consensus       271 ~~g~  274 (345)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9884

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.023  Score=46.83  Aligned_cols=106  Identities=12%  Similarity=0.028  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-------------EeCCCCCCccH-
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-------------FVNPKDHDKPI-  253 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-------------~i~~~~~~~~~-  253 (345)
                      ......++.+||..|+|. |..+..+|+ .|+ +|++++.++...+.+++.....             .........++ 
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999999974 777777776 699 9999999999888776432211             10000000000 


Q ss_pred             HHHHHh---hcCCCccEEEEccCC--------HHHHHHHHHHhccCCeEEEEecc
Q 019139          254 QQVLVD---LTDGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       254 ~~~~~~---~~~gg~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...+..   ...+.+|+|+++..-        ...+..+.+.|+|+ |++++...
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            000111   122378999986431        23467888999998 99877654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.47  E-value=0.016  Score=49.09  Aligned_cols=79  Identities=10%  Similarity=0.214  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEe--CCCCCCccHHHHHHhhc--C
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D  262 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i--~~~~~~~~~~~~~~~~~--~  262 (345)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    +.+...++  +..+ +.+..+.+.+..  -
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc-hhhHHHHHHHHHHHc
Confidence            5889999986 5  799999999999999 8999988875333332    22222222  2222 122222332222  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            479999988874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.35  E-value=0.03  Score=44.04  Aligned_cols=99  Identities=12%  Similarity=0.035  Sum_probs=59.5

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcC---CceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG---VTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g---~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      |.+..-..++.+|+|+|+|+.+.+++..+...+. +|+.+.|+.++.+.+. .+.   ....+...           ...
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----------~~~   76 (171)
T d1p77a1           9 LQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMD-----------SIP   76 (171)
T ss_dssp             HHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----------GCC
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhc-----------ccc
Confidence            4333334578899999999999999888877554 8999999988866553 232   11111111           111


Q ss_pred             CCCccEEEEccCCHH---HHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECIGNVS---VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...+|++++|++...   ........++++ ..++.+-.
T Consensus        77 ~~~~diiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~vy  114 (171)
T d1p77a1          77 LQTYDLVINATSAGLSGGTASVDAEILKLG-SAFYDMQY  114 (171)
T ss_dssp             CSCCSEEEECCCC-------CCCHHHHHHC-SCEEESCC
T ss_pred             ccccceeeecccccccccccchhhhhhccc-ceeeeeec
Confidence            237899999987431   111223445665 66665543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.20  E-value=0.018  Score=48.07  Aligned_cols=77  Identities=9%  Similarity=0.148  Sum_probs=48.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH---HcCCCeEEEEcCChhHHHHHHh---cCCceE---eCCCCCCccHHH---HHHhhcC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAK---AAGASRVIGIDIDPKKFDRAKN---FGVTEF---VNPKDHDKPIQQ---VLVDLTD  262 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~---~~G~~~vi~~~~~~~~~~~~~~---~g~~~~---i~~~~~~~~~~~---~~~~~~~  262 (345)
                      .+|||+|+ +++|++.++.+.   ..|+ +|+.+.+++++.+.+++   .+....   +|..+ .++..+   .+.....
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence            47999998 999999876554   3578 89999998877554432   222221   23333 233333   3322333


Q ss_pred             -CCccEEEEccCC
Q 019139          263 -GGVDYSFECIGN  274 (345)
Q Consensus       263 -gg~d~v~d~~g~  274 (345)
                       +++|+++++.|.
T Consensus        81 ~~~iDiLvnNAg~   93 (248)
T d1snya_          81 DQGLNVLFNNAGI   93 (248)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             cCCcceEEeeccc
Confidence             489999998773

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.18  E-value=0.024  Score=45.98  Aligned_cols=82  Identities=26%  Similarity=0.271  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++.+.+.++......+|++.+ ...           ++.....|+++=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----------~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----------DVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----------GGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----------ccccccceeeeccc
Confidence            367899999999999999999999999 99999999999988888887532 111           12223688888665


Q ss_pred             CCHHHHHHHHHHhcc
Q 019139          273 GNVSVMRAALECCHK  287 (345)
Q Consensus       273 g~~~~~~~~~~~l~~  287 (345)
                      .+...-....+.++-
T Consensus        92 ~~~~I~~~~a~~i~a  106 (201)
T d1c1da1          92 MGGVITTEVARTLDC  106 (201)
T ss_dssp             CSCCBCHHHHHHCCC
T ss_pred             ccccccHHHHhhhhh
Confidence            543323444455544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.01  Score=41.72  Aligned_cols=36  Identities=28%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|.+|+|+|.|..|+.+++++...|+ +|++.+.++.
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence            46789999999999999999999999 8999987553

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.059  Score=45.91  Aligned_cols=101  Identities=20%  Similarity=0.238  Sum_probs=57.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEE---EcCChhHH----HHHHhc---CCceE---eCCCCCCccHHHHHHhhcC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIG---IDIDPKKF----DRAKNF---GVTEF---VNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~---~~~~~~~~----~~~~~~---g~~~~---i~~~~~~~~~~~~~~~~~~  262 (345)
                      .|||+|+ +++|.+.+..+...|+ +++.   +.++.++.    +.++++   +....   +|..+ .++..+.+.+...
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga-~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~   81 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVTE   81 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCC-CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc-hHhhhhhhhhccc
Confidence            4577788 9999999988888998 4333   33433322    223333   22221   23333 2333444444445


Q ss_pred             CCccEEEEccCCH-------------------------HHHHHHHHHhc-cCCeEEEEeccCC
Q 019139          263 GGVDYSFECIGNV-------------------------SVMRAALECCH-KGWGTSVIVGVAA  299 (345)
Q Consensus       263 gg~d~v~d~~g~~-------------------------~~~~~~~~~l~-~~~G~~v~~G~~~  299 (345)
                      +.+|+++++.|..                         ...+.++..|. .++|+++.+++..
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~  144 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG  144 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh
Confidence            6899999988741                         12334444453 2239999998644

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.018  Score=48.01  Aligned_cols=47  Identities=26%  Similarity=0.354  Sum_probs=39.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT  241 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~  241 (345)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            5889999998 9999999999999999 899999888766544 455543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.84  E-value=0.05  Score=45.35  Aligned_cols=81  Identities=19%  Similarity=0.209  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCC-CCccHHHHHHhhc--C
Q 019139          193 EPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKD-HDKPIQQVLVDLT--D  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~-~~~~~~~~~~~~~--~  262 (345)
                      -+|.++||+|+ |  ++|.+.+..+...|+ +|+.+.++++..+.+    ...+....+.... ...+..+......  .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            36889999987 6  699999999999999 888888887655444    3344433332222 1122222333322  2


Q ss_pred             CCccEEEEccCC
Q 019139          263 GGVDYSFECIGN  274 (345)
Q Consensus       263 gg~d~v~d~~g~  274 (345)
                      +..|+.+++++.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            378999987653

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.78  E-value=0.08  Score=43.54  Aligned_cols=102  Identities=17%  Similarity=0.258  Sum_probs=67.2

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      +...++||++||=.|+| .|..+..+|+..|. .+|++++.+++..+.+++.    +....+..+.  .. .+.. ....
T Consensus        67 ~~l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~-~~~~-~~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TK-PEEY-RALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TC-GGGG-TTTC
T ss_pred             cccccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CC-cccc-cccc
Confidence            55678999999999986 38888899998763 3899999999987777542    2222222211  01 0011 1112


Q ss_pred             CCccEEEEccCCH----HHHHHHHHHhccCCeEEEEe
Q 019139          263 GGVDYSFECIGNV----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       263 gg~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..+|+++..+..+    ..+..+.+.|+++ |+++++
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            3688888655432    3477778899998 998875

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.75  E-value=0.2  Score=38.53  Aligned_cols=44  Identities=25%  Similarity=0.315  Sum_probs=38.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT  241 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  241 (345)
                      +|.++|.|.+|...+.-+...|+ .|.+.+++.++.+.++..++.
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcc
Confidence            68899999999988887777899 999999999998888777654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.75  E-value=0.061  Score=44.84  Aligned_cols=35  Identities=17%  Similarity=0.172  Sum_probs=30.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      .+.||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            46789998 9999999999999999 89998887554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.68  E-value=0.036  Score=48.31  Aligned_cols=102  Identities=26%  Similarity=0.226  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc--CCC
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--DGG  264 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~--~gg  264 (345)
                      .+++|++||=.++| +|.+++.+|+ .|+..|++++.+++..+.+++    .|....+....  .+..+.+..+.  +..
T Consensus       142 ~~~~g~~VLDl~~g-~G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~--~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVFTY-TGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV--GSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETTCT-TTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeecccCc-ccchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee--chhhhhhHHHHhccCC
Confidence            36789999887653 2444445444 477689999999998887753    45532221111  23444444332  238


Q ss_pred             ccEEEEccCC---------------HHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSFECIGN---------------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ||+|+--...               ...+..+++.|+|| |.++.+..
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEEC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            9988742221               12467778889998 99998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.67  E-value=0.014  Score=46.32  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=31.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      +.+|+|+|+|+.|+.++..++..|++.|+++++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999966888887654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.65  E-value=0.079  Score=42.95  Aligned_cols=102  Identities=15%  Similarity=0.070  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ...++||++||=+|+|. |..+..+++..+-.+|++++.+++..+.++    ..+....+..+......    .......
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~----~~~~~~~  125 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK----YSGIVEK  125 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG----TTTTCCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc----cccccce
Confidence            46789999999999863 667788888877558999999998877664    33332222222110110    0111125


Q ss_pred             ccEEEEccCCH----HHHHHHHHHhccCCeEEEEec
Q 019139          265 VDYSFECIGNV----SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+++..+...    ..+..+.+.|+++ |+++++-
T Consensus       126 vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         126 VDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            77777654422    2467777899998 9988763

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.62  E-value=0.61  Score=34.98  Aligned_cols=95  Identities=12%  Similarity=0.009  Sum_probs=63.0

Q ss_pred             CEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC--CccEEEEcc
Q 019139          196 SIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECI  272 (345)
Q Consensus       196 ~~VlI~G-ag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g--g~d~v~d~~  272 (345)
                      .+|.|+| .|.+|...+..++..|+ .|.+.++++.........+++.++.... .....+.+.+....  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc-hhhheeeeecccccccCCceEEEec
Confidence            5799999 69999999999999999 8999999887766666667776665543 23334444444332  224888988


Q ss_pred             CCHHHHHHHHHHhccCCeEEEE
Q 019139          273 GNVSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~  294 (345)
                      +....+...+....+  .+++.
T Consensus        88 Svk~~~~~~~~~~~~--~~~v~  107 (152)
T d2pv7a2          88 SVKREPLAKMLEVHT--GAVLG  107 (152)
T ss_dssp             SCCHHHHHHHHHHCS--SEEEE
T ss_pred             ccCHHHHHHHHHHcc--CCEEE
Confidence            754444444444444  35543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.57  E-value=0.15  Score=41.93  Aligned_cols=102  Identities=17%  Similarity=0.172  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCCCCccHHHHHHhhcCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +...+++|++||=+|+| .|..+..+|+......|++++.+++..+.+++.    +....+....  ... ...... ..
T Consensus        68 ~~l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~--~~~-~~~~~~-~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA--NKP-QEYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT--TCG-GGGTTT-CC
T ss_pred             HhCCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEee--ccC-cccccc-cc
Confidence            56678999999999996 377888888875444899999999888777653    2222222211  111 011111 11


Q ss_pred             CccEEEEccCC----HHHHHHHHHHhccCCeEEEEe
Q 019139          264 GVDYSFECIGN----VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       264 g~d~v~d~~g~----~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      .+|+++.....    ...+..+.+.|+++ |+++++
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            46666665543    23367777889997 998776

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.46  E-value=0.1  Score=42.01  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=60.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      ++++++||=+|+|. |..+..+++ .|+ +|+++|.+++..+.+++    .+........+ ..++     .+..+.+|+
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d-~~~l-----~~~~~~fD~  105 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGD-ARKL-----SFEDKTFDY  105 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC-TTSC-----CSCTTCEEE
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhccccccccccccc-cccc-----cccCcCceE
Confidence            57889999999974 778888876 577 89999999988877754    33221111111 0111     122247998


Q ss_pred             EEEccC-----CH---HHHHHHHHHhccCCeEEEEe
Q 019139          268 SFECIG-----NV---SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       268 v~d~~g-----~~---~~~~~~~~~l~~~~G~~v~~  295 (345)
                      |+-.-.     ..   ..+..+.+.|+|| |++++.
T Consensus       106 I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         106 VIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            886433     11   2477788899998 998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.45  E-value=0.15  Score=38.79  Aligned_cols=45  Identities=29%  Similarity=0.370  Sum_probs=34.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT  241 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~  241 (345)
                      +|.++|+|.+|.+.++-....|..++++.++++++.+.++ ++|..
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~   47 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE   47 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc
Confidence            5788999999998777444445349999999999887765 46654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.38  E-value=0.055  Score=45.25  Aligned_cols=80  Identities=14%  Similarity=0.233  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHH-H-HHHhcCCceE---eCCCCC--CccHHHHHHhhcC
Q 019139          193 EPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKF-D-RAKNFGVTEF---VNPKDH--DKPIQQVLVDLTD  262 (345)
Q Consensus       193 ~~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~~~-~-~~~~~g~~~~---i~~~~~--~~~~~~~~~~~~~  262 (345)
                      -.|.++||+|+ |  ++|.+.++-+...|+ +|+.+.+++++. + ..++++....   .|..+.  ..+..+.+.+...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            46789999985 4  599999999999999 888888877664 3 3344554322   222221  0123334443332


Q ss_pred             --CCccEEEEccC
Q 019139          263 --GGVDYSFECIG  273 (345)
Q Consensus       263 --gg~d~v~d~~g  273 (345)
                        +.+|+++.+.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              37899999887

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.0065  Score=47.31  Aligned_cols=91  Identities=12%  Similarity=0.106  Sum_probs=53.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      +|+|+|+|.+|.+.+..+...|. +|..+++++++.+.....+.+..........+..+.+     +.+|++|-++-...
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~D~iii~vka~~   75 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDLLLVTLKAWQ   75 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSEEEECSCGGG
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchhhhh-----cccceEEEeecccc
Confidence            68999999999998888888999 9999988876433222112111000000001111121     26899999988755


Q ss_pred             HHHHHHHH----hccCCeEEEEe
Q 019139          277 VMRAALEC----CHKGWGTSVIV  295 (345)
Q Consensus       277 ~~~~~~~~----l~~~~G~~v~~  295 (345)
                       ....++.    +.++ ..++.+
T Consensus        76 -~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          76 -VSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             -HHHHHHHHHTTSCTT-SCEEEE
T ss_pred             -hHHHHHhhccccCcc-cEEeec
Confidence             4444444    3444 555554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.32  E-value=0.13  Score=41.27  Aligned_cols=87  Identities=17%  Similarity=0.164  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.+........  ..+..    .    .++.+.+.+     .|++.-++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e----ccccccccc-----cccccccCC
Confidence            47899999999999999999999999 99998866543222  11211    1    234444432     677776654


Q ss_pred             C-HH----HHHHHHHHhccCCeEEEEecc
Q 019139          274 N-VS----VMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~-~~----~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      - +.    .-...+..++++ ..+|-++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecCc
Confidence            2 11    125667888887 78877764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.31  E-value=0.12  Score=40.38  Aligned_cols=99  Identities=22%  Similarity=0.240  Sum_probs=63.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-C-ChhHHHHHHhcCCceEeCCCCCCccHHH-------HHHhhcCCCcc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGID-I-DPKKFDRAKNFGVTEFVNPKDHDKPIQQ-------VLVDLTDGGVD  266 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~-~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~-------~~~~~~~gg~d  266 (345)
                      +|.|.|.|-+|...+..+.... . .++++. . .......+.+.+.+......+....+.+       .+.++ ..++|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vD   81 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDL-LEKVD   81 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHH-HTTCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhh-hccCC
Confidence            6889999999999888776544 4 565553 2 3344556677776544322210000100       00111 12699


Q ss_pred             EEEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          267 YSFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       267 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|+||+|...+.+.+-..+..| .+.|+++.+
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~  112 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE  112 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred             EEEECCCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            9999999877788888899997 888888864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.032  Score=40.54  Aligned_cols=35  Identities=29%  Similarity=0.423  Sum_probs=31.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      +.+|.|+|+|.+|.+.++.|+.+|+ ++++.+.++.
T Consensus        11 ~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            3579999999999999999999999 8899887665

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.14  E-value=0.29  Score=37.52  Aligned_cols=94  Identities=20%  Similarity=0.294  Sum_probs=55.2

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHcCCCeEEEE-cCCh--hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC-CCccEEEE
Q 019139          196 SIVAVFGLGTVGL-AVAEGAKAAGASRVIGI-DIDP--KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFE  270 (345)
Q Consensus       196 ~~VlI~Gag~vG~-~a~q~a~~~G~~~vi~~-~~~~--~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-gg~d~v~d  270 (345)
                      =+|.|+|+|.+|. +..++.+......++++ +++.  ....+++++|.....       ...+.+.+... .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~-------~~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------AGVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------SHHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc-------cceeeeeecccccccCEEEE
Confidence            4688999999987 56677776654356665 4443  345677888765321       11233333322 37999999


Q ss_pred             ccCCHHHHHHH--HHHhccCCeEEEEecc
Q 019139          271 CIGNVSVMRAA--LECCHKGWGTSVIVGV  297 (345)
Q Consensus       271 ~~g~~~~~~~~--~~~l~~~~G~~v~~G~  297 (345)
                      ++....-..+.  .+.++.| -.++....
T Consensus        78 ATpag~h~~~~~~~~aa~~G-~~VID~s~  105 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPG-IRLIDLTP  105 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEECST
T ss_pred             cCCchhHHHhHHHHHHHHcC-CEEEEccc
Confidence            87754334433  4445554 45555543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.11  E-value=0.038  Score=47.69  Aligned_cols=45  Identities=27%  Similarity=0.481  Sum_probs=33.0

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                      +.+.....++++||-+|+| .|.+++.+|+ +|+++|++++.++.-.
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~   71 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY   71 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence            4444556789999999987 5666665555 5877999999988643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.09  E-value=0.15  Score=35.71  Aligned_cols=70  Identities=19%  Similarity=0.266  Sum_probs=50.0

Q ss_pred             CCCCCEEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEE
Q 019139          192 VEPGSIVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a-~q~a~~~G~~~vi~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      ++...++.++|.|++|..+ +++++..|+ .|.+.|..+ ...+.+++.|......+..  ...         .+.|+++
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~~i---------~~~d~vV   72 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE--EHI---------EGASVVV   72 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG--GGG---------TTCSEEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc--ccC---------CCCCEEE
Confidence            4566889999999999876 899999999 999999764 3455667788865443332  111         2578777


Q ss_pred             EccC
Q 019139          270 ECIG  273 (345)
Q Consensus       270 d~~g  273 (345)
                      -+.+
T Consensus        73 ~S~A   76 (96)
T d1p3da1          73 VSSA   76 (96)
T ss_dssp             ECTT
T ss_pred             ECCC
Confidence            6655

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.03  E-value=0.022  Score=48.69  Aligned_cols=103  Identities=16%  Similarity=0.092  Sum_probs=62.7

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc----CCceEeCCCC-CCccHHHHHHhhcC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKD-HDKPIQQVLVDLTD  262 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~----g~~~~i~~~~-~~~~~~~~~~~~~~  262 (345)
                      +..+.+++.+||=+|+| .|..+..+|+. |+ +|++++.+++-++.+++.    +.....+... ...++...-.+...
T Consensus        50 ~~l~~~~~~~vLD~GcG-~G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACG-TGVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHHTTCCEEEESSCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HHhhhcCCCEEEEecCC-CcHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            33444667899999986 47778888775 88 899999999987777542    2211100000 00112111122333


Q ss_pred             C-CccEEEEccCC--------------HHHHHHHHHHhccCCeEEEE
Q 019139          263 G-GVDYSFECIGN--------------VSVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       263 g-g~d~v~d~~g~--------------~~~~~~~~~~l~~~~G~~v~  294 (345)
                      . ++|.|+.....              ...++.+.+.|+|+ |++++
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            3 89988864321              12578888999998 99876

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.94  E-value=0.081  Score=42.57  Aligned_cols=72  Identities=15%  Similarity=0.129  Sum_probs=44.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+|||+|+ |.+|...+..+...|.+ .|+...++.++.+.+.. +.+.+. .+.  .+. +.+.+.. .++|.++.+.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~-~d~--~~~-~~~~~~~-~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFI-GDI--TDA-DSINPAF-QGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEE-CCT--TSH-HHHHHHH-TTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEE-eee--ccc-ccccccc-ccceeeEEEEe
Confidence            68999998 99999999999999963 46667777766544322 222222 111  111 2222222 25888988865

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.77  E-value=0.35  Score=37.57  Aligned_cols=44  Identities=18%  Similarity=0.184  Sum_probs=37.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888999 89999999999887765443

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.71  E-value=0.091  Score=43.18  Aligned_cols=105  Identities=16%  Similarity=0.296  Sum_probs=69.4

Q ss_pred             hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh---
Q 019139          189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL---  260 (345)
Q Consensus       189 ~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~---  260 (345)
                      ..+.....+||-+|.+ +|..++.+|+++. -.+++.++.+++..+.++    +.|....+....  .+..+.+.++   
T Consensus        54 L~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~  130 (227)
T d1susa1          54 LLKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKD  130 (227)
T ss_dssp             HHHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHC
T ss_pred             HHHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhc
Confidence            3444566789999874 5888888888874 238999999998877665    456654443322  2334444443   


Q ss_pred             --cCCCccEEE-EccCC--HHHHHHHHHHhccCCeEEEEecc
Q 019139          261 --TDGGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 --~~gg~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                        ..+.||.|| |+--+  ..-++.+++.|++| |.++.=..
T Consensus       131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNv  171 (227)
T d1susa1         131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  171 (227)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETT
T ss_pred             cccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccC
Confidence              234799887 44332  23478889999997 98876554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.65  E-value=0.038  Score=45.76  Aligned_cols=35  Identities=29%  Similarity=0.273  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999999999999999 999998753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.026  Score=38.23  Aligned_cols=34  Identities=24%  Similarity=0.440  Sum_probs=29.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .+|.|+|+|.+|.+.++.++.+|+ ++++.+.+++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            478999999999999999999999 8888876544

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.40  E-value=0.041  Score=47.65  Aligned_cols=94  Identities=24%  Similarity=0.260  Sum_probs=53.6

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHhcCCce---EeCCCCCCccHHHHHHhhcCC
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTE---FVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~---~~~~~g~~~---~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      ..+.+|++||-+|+|. |.+++.+|+ +|+++|++++.++....   .++..+...   ++....  .++     .....
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~--~~~-----~~~~~   99 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV--EEV-----ELPVE   99 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT--TTC-----CCSSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH--HHc-----ccccc
Confidence            3456789999999874 666665555 68778999998864322   223334322   111111  110     11223


Q ss_pred             CccEEEEc-cCC--------HHHHHHHHHHhccCCeEEE
Q 019139          264 GVDYSFEC-IGN--------VSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       264 g~d~v~d~-~g~--------~~~~~~~~~~l~~~~G~~v  293 (345)
                      .+|+++.. .+.        +..+...-+.|+|+ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            78988752 221        23344555789997 9875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.047  Score=43.23  Aligned_cols=37  Identities=35%  Similarity=0.384  Sum_probs=33.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .....+|+|+|+|+.|+.|+..+...|+ +|+.+++.+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4556899999999999999999999999 999998764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.35  E-value=0.02  Score=45.93  Aligned_cols=94  Identities=21%  Similarity=0.328  Sum_probs=59.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceE-eCCCCCCccHHHHHHhhcCCCcc
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      +++ .+||=+|+| .|..+..+++ .|+ +|++++.+++.++.++    ..+.+.+ +...+. ..+      ...+.||
T Consensus        29 ~~~-grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~-~~~------~~~~~fD   97 (198)
T d2i6ga1          29 VAP-GRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL-NTL------TFDGEYD   97 (198)
T ss_dssp             SCS-CEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT-TTC------CCCCCEE
T ss_pred             CCC-CcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheec-ccc------ccccccc
Confidence            344 489999997 6888887776 588 8999999998877664    3444421 111110 000      1123789


Q ss_pred             EEEEccC-----C---HHHHHHHHHHhccCCeEEEEecc
Q 019139          267 YSFECIG-----N---VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       267 ~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+...-     .   ...+..+.+.|+++ |.+++...
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            9886321     1   13567777789997 99888643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.33  E-value=0.036  Score=46.36  Aligned_cols=34  Identities=35%  Similarity=0.400  Sum_probs=30.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +++|+|+|+|..|+.++..++..|+ +|+++++++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            4789999999999999999999999 999998753

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.30  E-value=0.11  Score=43.70  Aligned_cols=97  Identities=19%  Similarity=0.155  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce-EeCCCCCCccHHHHHHhhcCC-C
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLTDG-G  264 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~-~i~~~~~~~~~~~~~~~~~~g-g  264 (345)
                      .+++|++||-.++| +|.+++.+|+..++ +|++++.+++..+.+++    .+.+. +.....   +.    .++... .
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~---D~----~~~~~~~~  174 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM---DN----RDFPGENI  174 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CT----TTCCCCSC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEc---ch----HHhccCCC
Confidence            36899999998774 46666677776445 89999999998888753    34432 211111   11    122233 6


Q ss_pred             ccEEE-Ecc-CCHHHHHHHHHHhccCCeEEEEecc
Q 019139          265 VDYSF-ECI-GNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       265 ~d~v~-d~~-g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|.|+ +.. .+...+..+++.++++ |.+.....
T Consensus       175 ~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         175 ADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             EEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence            88555 433 3445578899999997 98866554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.29  E-value=0.16  Score=40.38  Aligned_cols=36  Identities=19%  Similarity=0.390  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|.++.|+|.|.+|...+++++.+|. +|++.+....
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-cccccccccc
Confidence            37899999999999999999999999 8999887544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.28  E-value=0.075  Score=46.17  Aligned_cols=46  Identities=30%  Similarity=0.343  Sum_probs=38.2

Q ss_pred             cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 019139          190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK  236 (345)
Q Consensus       190 ~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~  236 (345)
                      .-+.+|.+|||+|+ |-+|...+..+...|+ .|+++.++..+.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            34678999999998 8899999998888899 8999888877665543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.18  E-value=0.11  Score=42.71  Aligned_cols=90  Identities=16%  Similarity=0.183  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc-CCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-DGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~-~gg~d~  267 (345)
                      .++.+||=+|+| .|..+..+++ .|. +|++++.+++-++.+++    .+...-+...+    +    .++. .+.+|+
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d----~----~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD----I----SNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC----G----GGCCCSCCEEE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccc----h----hhhcccccccc
Confidence            345789999986 4677777766 577 89999999988777653    34332222221    1    1222 348999


Q ss_pred             EEEccCC------H----HHHHHHHHHhccCCeEEEE
Q 019139          268 SFECIGN------V----SVMRAALECCHKGWGTSVI  294 (345)
Q Consensus       268 v~d~~g~------~----~~~~~~~~~l~~~~G~~v~  294 (345)
                      |+...+.      .    ..++.+.+.|+|+ |.+++
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            9864331      1    2467777888998 98874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.18  E-value=0.15  Score=43.42  Aligned_cols=75  Identities=21%  Similarity=0.245  Sum_probs=46.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC--Ch---hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEE
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI--DP---KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYS  268 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~--~~---~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v  268 (345)
                      .+|||+|+ |-+|...+..+...|+ +|+++++  ..   ++.+.+...+--+++..+-  .+ .+.+.+...+ ++|+|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di--~~-~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI--RN-KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT--TC-HHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc--CC-HHHHHHHHHhcCCceE
Confidence            37999998 9999999999988999 8999863  11   2233334433223332211  11 2233333334 78999


Q ss_pred             EEccCC
Q 019139          269 FECIGN  274 (345)
Q Consensus       269 ~d~~g~  274 (345)
                      |.+++.
T Consensus        77 ih~aa~   82 (338)
T d1orra_          77 FHLAGQ   82 (338)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            998763

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.09  E-value=0.31  Score=33.47  Aligned_cols=65  Identities=18%  Similarity=0.315  Sum_probs=46.8

Q ss_pred             EEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Gag~vG~~a-~q~a~~~G~~~vi~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +|-++|.|++|..+ +++++..|+ .|.+.|..+ +..+.++++|+........  +++         .+.|+++-+..
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~--~~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA--DNW---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT--TSC---------CCCSEEEECTT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc--ccc---------CCCCEEEEecC
Confidence            56778999999864 688999999 999999876 4566788999875433222  222         25788876655

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.02  E-value=0.039  Score=44.12  Aligned_cols=99  Identities=15%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCce--E-eCCCCCCccHHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--F-VNPKDHDKPIQQVLV  258 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~--~-i~~~~~~~~~~~~~~  258 (345)
                      |.+.....++++||=+|+| .|..++.+++ .+. +|++++.++...+.+++    .+...  + +...+    +.   .
T Consensus        44 Li~~l~~~~~~~VLDiGcG-~G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d----~~---~  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCG-YGVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----LY---E  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCT-TSHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----TT---T
T ss_pred             HHHhCCcCCCCeEEEEeec-CChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc----hh---h
Confidence            4566678889999999885 3566666665 455 89999999988887753    23321  1 11111    11   1


Q ss_pred             hhcCCCccEEEEccC---CH----HHHHHHHHHhccCCeEEEEe
Q 019139          259 DLTDGGVDYSFECIG---NV----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       259 ~~~~gg~d~v~d~~g---~~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ....+.+|+|+-...   ..    ..++.+.+.|+++ |+++++
T Consensus       114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            122347999986322   22    2367777889998 987654

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.92  E-value=0.18  Score=42.23  Aligned_cols=95  Identities=14%  Similarity=0.118  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      ..++.+||=+|+|. |..+..+++.. +. +++++|.++...+.+++......+...+. .++     .+..+.+|+|+.
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~-~~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh-hhc-----cCCCCCEEEEee
Confidence            46678899889863 67777777765 45 89999999998888876443322211110 111     122347999997


Q ss_pred             ccCCHHHHHHHHHHhccCCeEEEEec
Q 019139          271 CIGNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       271 ~~g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .-.- ..+..+.+.|+|+ |++++.-
T Consensus       154 ~~~~-~~~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         154 IYAP-CKAEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             ESCC-CCHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCH-HHHHHHHHHhCCC-cEEEEEe
Confidence            6444 3388899999998 9998774

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.89  E-value=0.26  Score=37.45  Aligned_cols=84  Identities=14%  Similarity=0.195  Sum_probs=57.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV  275 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~  275 (345)
                      +|.++|+|.+|.+.+.-....|. ++++.+++.++.+.+ +++|....-       +..+.+.     ..|+||=++-. 
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~-----~~dvIilavkp-   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-------SHQDLID-----QVDLVILGIKP-   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-------SHHHHHH-----TCSEEEECSCG-
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-------hhhhhhh-----ccceeeeecch-
Confidence            57889999999987776666787 899999998876655 567754321       2222222     47888877754 


Q ss_pred             HHHHHHHHHhccCCeEEEEe
Q 019139          276 SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       276 ~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..+...+..+.++ ..++.+
T Consensus        68 ~~~~~vl~~l~~~-~~iis~   86 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISM   86 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEEC
T ss_pred             HhHHHHhhhcccc-eeEecc
Confidence            3367777777775 555544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.79  E-value=0.39  Score=36.48  Aligned_cols=96  Identities=22%  Similarity=0.254  Sum_probs=64.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhH---HHHHHhcCCceEeCCCCCCcc---------------HH
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDKP---------------IQ  254 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~--G~~~vi~~~~~~~~---~~~~~~~g~~~~i~~~~~~~~---------------~~  254 (345)
                      .+|.|.|+ |.+|.-++.+.+..  .+ +|++......-   .+.++++.+..++..++....               -.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            67999999 99999999999986  46 77776554432   345577888877655431100               01


Q ss_pred             HHHHhhcCCCccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139          255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       255 ~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  293 (345)
                      +.+.+.....+|+++.++.+...+...+..++.+ -++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~ia  119 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KTVA  119 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SEEE
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC-CEEE
Confidence            1222222236899998877767688888999885 5544

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.76  E-value=0.14  Score=37.18  Aligned_cols=43  Identities=23%  Similarity=0.231  Sum_probs=36.3

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +.+.....++.+|+|+|+|.+|.-.++.++.+|. .|..+.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            3455666788999999999999999999999998 888887754

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.74  E-value=0.27  Score=41.75  Aligned_cols=102  Identities=18%  Similarity=0.126  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~i~~~~~---~~~~~~~~~~~~~gg~d~  267 (345)
                      ...++|||+|.|. |..+-.+++..+.++|.+++-+++-.+.++++-..  ...+....   ..+-.+.+.+...+.+|+
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv  157 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA  157 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence            3457899998643 44555677766766899999999988888775311  00011000   123455666655558997


Q ss_pred             EE-EccC---------CHHHHHHHHHHhccCCeEEEEec
Q 019139          268 SF-ECIG---------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      || |...         +..-++.+.+.|+++ |.++.-.
T Consensus       158 Ii~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         158 VIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             EEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            77 4332         234578888999997 9888754

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.67  E-value=0.56  Score=36.62  Aligned_cols=94  Identities=17%  Similarity=0.175  Sum_probs=58.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcC-CCeEEEEcC-C-hhHHHHHHhcCCceEeCCCC----------CCccHHHHHHhhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDI-D-PKKFDRAKNFGVTEFVNPKD----------HDKPIQQVLVDLTDG  263 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G-~~~vi~~~~-~-~~~~~~~~~~g~~~~i~~~~----------~~~~~~~~~~~~~~g  263 (345)
                      +|.|.|.|-+|+..++.+.... . .++++.. . ......+...+.........          ....+.+..     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            5789999999999999988664 5 6777633 2 23334444444332211110          001111111     1


Q ss_pred             CccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          264 GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       264 g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ++|+|+||+|.....+.+-..+..+ -++++.|.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            5899999999877677777888886 78887765

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.67  E-value=0.2  Score=41.05  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-hcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+. ..|+. .+...           ++..-..|+++=|
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~-~~~~~-----------~~~~~~cDIl~Pc  103 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD-AVAPN-----------AIYGVTCDIFAPC  103 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE-ECCGG-----------GTTTCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc-ccCCc-----------ccccccccEeccc
Confidence            468999999999999999999999999 8999998888876654 45553 22211           1222367877766


Q ss_pred             cCCHHHHHHHHHHhcc
Q 019139          272 IGNVSVMRAALECCHK  287 (345)
Q Consensus       272 ~g~~~~~~~~~~~l~~  287 (345)
                      .-+...-......++-
T Consensus       104 A~~~~I~~~~~~~l~a  119 (230)
T d1leha1         104 ALGAVLNDFTIPQLKA  119 (230)
T ss_dssp             SCSCCBSTTHHHHCCC
T ss_pred             ccccccChHHhhccCc
Confidence            5543222333444544

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.49  E-value=0.052  Score=44.11  Aligned_cols=33  Identities=24%  Similarity=0.402  Sum_probs=29.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +|+|+|+|..|+.++..++..|.++|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999975799998764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.45  E-value=0.18  Score=36.77  Aligned_cols=38  Identities=32%  Similarity=0.588  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      ++++.+++|+|+|.+|.-.+..++.+|. +|..+++++.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4677899999999999999999999999 8999887654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.13  Score=40.91  Aligned_cols=39  Identities=28%  Similarity=0.405  Sum_probs=34.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      .+|.|+|+|.+|...++++...|+ +|+..+.+++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            479999999999999999999999 999999999876644

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.26  E-value=0.082  Score=44.03  Aligned_cols=32  Identities=22%  Similarity=0.399  Sum_probs=28.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +|||+|+ |-+|...+..++..|+ .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899998 9999999999999999 899987753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.18  E-value=1  Score=33.29  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=38.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc-CCCeEEE-EcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~-G~~~vi~-~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +|.|.|+ |-.|...++..... ++ .+++ +++. +........++|-++|... ++...+.+......+..+|+-++|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~-~~~~~~~~~~~DvvIDFS~-p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAG-DPLSLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTT-CCTHHHHTTTCSEEEECCC-TTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecC-CchhhhccccCCEEEEccc-HHHHHHHHHHHHhcCCCEEEeccc
Confidence            5889997 99999988876654 56 4444 4332 2222333334455555443 222333333333234445555555

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.07  E-value=0.12  Score=40.32  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=32.8

Q ss_pred             EEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          197 IVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       197 ~VlI~-Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      +|.|+ |+|++|...++.+...|+ +|+...|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57788 569999999999999999 899999998876655

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.16  Score=41.32  Aligned_cols=105  Identities=18%  Similarity=0.215  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhh-
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL-  260 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~-  260 (345)
                      ...+.....+||-+|.+ .|..++.+|+++  +. +++.++.+++..+.++    +.|....+....  .+..+.+.++ 
T Consensus        53 ~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~--Gda~e~l~~~~  128 (219)
T d2avda1          53 NLARLIQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELL  128 (219)
T ss_dssp             HHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEE--eehhhcchhhh
Confidence            33445566789999985 477788888876  34 8999999998876664    356544333322  2233333332 


Q ss_pred             ---cCCCccEEEEccC-C--HHHHHHHHHHhccCCeEEEEecc
Q 019139          261 ---TDGGVDYSFECIG-N--VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ---~~gg~d~v~d~~g-~--~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                         ..+.+|.||--.. +  ..-++.+++.|++| |.++.=..
T Consensus       129 ~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~  170 (219)
T d2avda1         129 AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  170 (219)
T ss_dssp             HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             hhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCC
Confidence               2347998884333 2  23378889999997 88876544

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.99  E-value=0.45  Score=38.23  Aligned_cols=96  Identities=17%  Similarity=0.179  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH---cCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~---~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+++.+||=+|+| .|..+..+++.   .++ +|+++|.+++-++.+++    .+....+....  .+.    .++....
T Consensus        37 ~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~--~d~----~~~~~~~  108 (225)
T d1im8a_          37 VTADSNVYDLGCS-RGAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC--NDI----RHVEIKN  108 (225)
T ss_dssp             CCTTCEEEEESCT-TCHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC--SCT----TTCCCCS
T ss_pred             cCCCCEEEEeccc-hhhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc--chh----hcccccc
Confidence            6789999999986 36666777764   467 99999999998887764    23222221111  111    1222235


Q ss_pred             ccEEEEccCC--------HHHHHHHHHHhccCCeEEEEec
Q 019139          265 VDYSFECIGN--------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+++-+..-        ...++.+.+.|+|+ |.+++.-
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            6766654221        24588889999998 9998864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.97  E-value=0.25  Score=39.28  Aligned_cols=37  Identities=41%  Similarity=0.420  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++...
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSC
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCccc
Confidence            357899999999999999999999999 8999877543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.90  E-value=1.1  Score=34.61  Aligned_cols=100  Identities=22%  Similarity=0.249  Sum_probs=61.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHhcCCceEeCCCCCCccHHH-------HHHhhcCCCccE
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDHDKPIQQ-------VLVDLTDGGVDY  267 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~--~~~~~~~~~~~g~~~~i~~~~~~~~~~~-------~~~~~~~gg~d~  267 (345)
                      +|.|.|-|-+|...++++...+--.++++..  .......+..++.+......+....+.+       ...++. .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            5788999999999999877665225655532  2344456666665543322210000000       001111 26999


Q ss_pred             EEEccCCHHHHHHHHHHhccCCeEEEEeccC
Q 019139          268 SFECIGNVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       268 v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      |+||+|...+.+.+-..+..+ .+.++.+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~  111 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE  111 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            999999877777888889887 888887753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.90  E-value=0.086  Score=44.68  Aligned_cols=37  Identities=24%  Similarity=0.315  Sum_probs=32.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .....+|+|+|+|..|+.++..+...|. +|++++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3455789999999999999999999999 999998754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=91.88  E-value=0.85  Score=36.32  Aligned_cols=96  Identities=18%  Similarity=0.142  Sum_probs=63.6

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      +..||=+|+| .|..++.+|+..--..+++++.+......+    ++.+.+.+.....   +.......+..+.+|.|+-
T Consensus        30 ~PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~---Da~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI---DADTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC---CGGGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc---chhhhhcccCchhhhcccc
Confidence            4566767887 488889999987434999999998876654    4567664433322   1222222334447887775


Q ss_pred             ccCC--------------HHHHHHHHHHhccCCeEEEEe
Q 019139          271 CIGN--------------VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       271 ~~g~--------------~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ....              +..+..+.+.|+|| |.+.+.
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~  143 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK  143 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            4433              24688888999998 998875

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.87  E-value=1  Score=37.78  Aligned_cols=108  Identities=15%  Similarity=0.202  Sum_probs=67.2

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCCCC----------------
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH----------------  249 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~--~~~~~~~~~~~~g~~~~i~~~~~----------------  249 (345)
                      +.....+..+|+...+|..|++++..|+.+|.+-++.+.  .++.+.+.++.+|++.++...+.                
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            455566667666667799999999999999984444443  35677888899999755433221                


Q ss_pred             ----------Ccc-------HHHHHHhhcCCCccEEEEccCCHHHHHHHHHH---hccCCeEEEEec
Q 019139          250 ----------DKP-------IQQVLVDLTDGGVDYSFECIGNVSVMRAALEC---CHKGWGTSVIVG  296 (345)
Q Consensus       250 ----------~~~-------~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~---l~~~~G~~v~~G  296 (345)
                                +.+       ...++.+..++.+|.++-++|+..++.-..+.   ..+. .+++.+-
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Ve  198 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQ  198 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEec
Confidence                      000       11122222334689999988876555544444   4454 6665553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.86  E-value=0.11  Score=43.11  Aligned_cols=33  Identities=30%  Similarity=0.448  Sum_probs=30.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      +.+|+|+|+|++|..++..+.++|.++++.+|.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            478999999999999999999999999999874

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.85  E-value=0.11  Score=42.48  Aligned_cols=38  Identities=24%  Similarity=0.212  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .+...+|+|+|+|+.|+.++..++..|+ +|+.++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3567899999999999999999999999 8999987653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=1.1  Score=38.85  Aligned_cols=108  Identities=17%  Similarity=0.271  Sum_probs=69.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCCCC----------------
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH----------------  249 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~--~~~~~~~~~~~~g~~~~i~~~~~----------------  249 (345)
                      +...++++..|+...+|..|.+.+.+|+.+|.+-++++.  .++++.+.++.+|++.+......                
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            455667777776667799999999999999994444443  35578888999999865432110                


Q ss_pred             --------------Cc-------cHHHHHHhhcCCCccEEEEccCCHHHHHHHH---HHhccCCeEEEEec
Q 019139          250 --------------DK-------PIQQVLVDLTDGGVDYSFECIGNVSVMRAAL---ECCHKGWGTSVIVG  296 (345)
Q Consensus       250 --------------~~-------~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~---~~l~~~~G~~v~~G  296 (345)
                                    +.       ....++.+-.++.+|.++-++|+..++.-..   +...+. -+++.+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve  239 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD  239 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence                          00       0111222223447899999999765554444   444565 6776664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.74  E-value=0.19  Score=36.69  Aligned_cols=41  Identities=32%  Similarity=0.347  Sum_probs=34.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +...-..+.+|+|+|+|.+|.-+++.+..+|. +|+.+++.+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            33344567899999999999999999999999 899987754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.71  E-value=0.34  Score=38.07  Aligned_cols=89  Identities=24%  Similarity=0.255  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      -.+.++.|+|.|.+|...+++++.+|+ +|++.++....... ...+...        .++.+.+.     ..|++.-++
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell~-----~sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLLA-----RADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHHH-----HCSEEEECC
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHHh-----hCCEEEEcC
Confidence            357899999999999999999999999 99999876544332 2333221        12323332     256665544


Q ss_pred             CC-HH---H-HHHHHHHhccCCeEEEEecc
Q 019139          273 GN-VS---V-MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       273 g~-~~---~-~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .- +.   . -...+..++++ ..++-++-
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            41 11   1 24556667775 66666654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.65  E-value=0.16  Score=40.29  Aligned_cols=82  Identities=15%  Similarity=0.143  Sum_probs=54.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceE-----eCCCC--CCccHHHHHHhhcCCCccEEE
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-----VNPKD--HDKPIQQVLVDLTDGGVDYSF  269 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~-----i~~~~--~~~~~~~~~~~~~~gg~d~v~  269 (345)
                      +|.|+|+|..|.+.+..+...|. +|....++++..+.+.+-+-...     .....  ...++.+.+.     +.|+++
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~ii   82 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEIIL   82 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCEE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEEE
Confidence            69999999999998888888888 89999999988877754332111     01111  0122333332     579999


Q ss_pred             EccCCHHHHHHHHHHh
Q 019139          270 ECIGNVSVMRAALECC  285 (345)
Q Consensus       270 d~~g~~~~~~~~~~~l  285 (345)
                      -++.+.. +...++.+
T Consensus        83 iavPs~~-~~~~~~~~   97 (189)
T d1n1ea2          83 FVIPTQF-LRGFFEKS   97 (189)
T ss_dssp             ECSCHHH-HHHHHHHH
T ss_pred             EcCcHHH-HHHHHHHH
Confidence            9988754 66666544

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.63  E-value=0.094  Score=45.49  Aligned_cols=95  Identities=22%  Similarity=0.242  Sum_probs=52.1

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH---HHHHHhcCCce-E-eCCCCCCccHHHHHHhhcCCC
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK---FDRAKNFGVTE-F-VNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~---~~~~~~~g~~~-~-i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      ....++.+||-+|+| .|.++..+| .+|+..|++++.++.-   .+..++.+... + +...+. .++     .+....
T Consensus        34 ~~~~~~~~VLDlGcG-tG~ls~~aa-~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~-~~l-----~~~~~~  105 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCG-TGILSMFAA-KHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKL-EDV-----HLPFPK  105 (328)
T ss_dssp             HHHHTTCEEEEETCT-TSHHHHHHH-HTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT-TTS-----CCSSSC
T ss_pred             cccCCcCEEEEeCCC-CCHHHHHHH-HhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeeh-hhc-----cCcccc
Confidence            344678999999986 366665444 4687799999988632   22223344322 1 111110 111     122347


Q ss_pred             ccEEEEcc-C----C---H-HHHHHHHHHhccCCeEEE
Q 019139          265 VDYSFECI-G----N---V-SVMRAALECCHKGWGTSV  293 (345)
Q Consensus       265 ~d~v~d~~-g----~---~-~~~~~~~~~l~~~~G~~v  293 (345)
                      +|+++... +    .   . ..+...-+.|+|+ |+++
T Consensus       106 ~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         106 VDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             EEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            99887532 1    1   1 2234444789997 8774

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.54  E-value=0.12  Score=42.11  Aligned_cols=35  Identities=29%  Similarity=0.283  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +...+|+|+|+|..|++++..+...|. +|+++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 89999864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.51  E-value=0.24  Score=42.83  Aligned_cols=36  Identities=17%  Similarity=0.170  Sum_probs=29.0

Q ss_pred             CCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          195 GSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       195 g~~VlI~Ga---g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      ++..||+|+   .++|.+.++.+...|+ +|+.+.++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~   40 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVY   40 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhh
Confidence            467799995   3899999999999999 88887666543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.28  E-value=0.27  Score=38.86  Aligned_cols=45  Identities=18%  Similarity=0.122  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG  239 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g  239 (345)
                      .+.++.|+|.|.+|...++.++.+|. +|++.++........+..+
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~   87 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELN   87 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHT
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccc
Confidence            57899999999999999999999999 8999987654444444444

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.27  E-value=0.077  Score=46.03  Aligned_cols=75  Identities=20%  Similarity=0.216  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHhc----CCceEe-CCCCCCccHHHHHHhhcCC-Cc
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNF----GVTEFV-NPKDHDKPIQQVLVDLTDG-GV  265 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~-~~~~~----g~~~~i-~~~~~~~~~~~~~~~~~~g-g~  265 (345)
                      .+.+|||+|+ |-+|...++.+...|+ .|+++++...+.. +++..    +...+. |..+     .+.+.+.... .+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d-----~~~l~~~~~~~~~   80 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-----QNKLLESIREFQP   80 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-----HHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccC-----hHhhhhhhhhchh
Confidence            4689999998 9999999999999999 8999988665322 12211    122111 2222     2233333334 78


Q ss_pred             cEEEEccCC
Q 019139          266 DYSFECIGN  274 (345)
Q Consensus       266 d~v~d~~g~  274 (345)
                      |+++.+++.
T Consensus        81 ~~v~~~aa~   89 (356)
T d1rkxa_          81 EIVFHMAAQ   89 (356)
T ss_dssp             SEEEECCSC
T ss_pred             hhhhhhhcc
Confidence            899988774

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.19  E-value=0.15  Score=42.75  Aligned_cols=37  Identities=24%  Similarity=0.258  Sum_probs=28.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHH
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD  233 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~-~~~~~~  233 (345)
                      ..+||+|+ +++|.+.++.+...|+ +|+...+ ++++.+
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN   41 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHH
Confidence            35688888 9999999999999999 7776544 444443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=91.17  E-value=1.2  Score=33.25  Aligned_cols=95  Identities=11%  Similarity=-0.025  Sum_probs=58.1

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HH---HHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DR---AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~-~~---~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.++|.|.|.+|...++.+...|. ++++++.++++. +.   +...|..-+. -+.   .-.+.+.+..-..+|.++-
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd~---~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDS---NDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCT---TSHHHHHHHTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-ccC---cchHHHHHhccccCCEEEE
Confidence            4679999999999999999999999 788888776532 22   2333443322 211   1123444443347899998


Q ss_pred             ccCCHHH---HHHHHHHhccCCeEEEEe
Q 019139          271 CIGNVSV---MRAALECCHKGWGTSVIV  295 (345)
Q Consensus       271 ~~g~~~~---~~~~~~~l~~~~G~~v~~  295 (345)
                      +++....   +-...+.+.+. -+++..
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            8887542   22223345554 555544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.17  E-value=0.096  Score=42.84  Aligned_cols=35  Identities=31%  Similarity=0.322  Sum_probs=30.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      .++||+|+ +++|.+.++.+...|+ +|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            57899998 9999999999999999 89999887664

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.17  E-value=0.26  Score=42.43  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=44.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC----ChhHHHHHHh---cCCceE-eCCCCCCccHHHHHHhhcCC-Ccc
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI----DPKKFDRAKN---FGVTEF-VNPKDHDKPIQQVLVDLTDG-GVD  266 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~----~~~~~~~~~~---~g~~~~-i~~~~~~~~~~~~~~~~~~g-g~d  266 (345)
                      +|||+|+ |-+|...+..+...|+ .|+++++    .+......+.   -++..+ .|..+     .+.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-----EALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-----HHHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC-----HHHHHHHHhccCCC
Confidence            5899998 9999999999999999 8988864    2222222222   223222 12222     1233333333 799


Q ss_pred             EEEEccC
Q 019139          267 YSFECIG  273 (345)
Q Consensus       267 ~v~d~~g  273 (345)
                      +||.+++
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.13  E-value=0.17  Score=36.78  Aligned_cols=38  Identities=11%  Similarity=0.181  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .++...+|+|+|+|.+|.-.++.++.+|. +|+.+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            34556899999999999999999999999 899987754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.08  E-value=0.11  Score=42.92  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=29.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|+|+|+|..|++++..++..|..+|++++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5899999999999999999999658888877643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.07  E-value=0.17  Score=36.56  Aligned_cols=35  Identities=17%  Similarity=0.272  Sum_probs=31.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      ..+++|+|+|.+|.-+++.+..+|. +|+.+.+.+.
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            4789999999999999999999999 8998877654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.03  E-value=0.14  Score=43.20  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ++..+|+|+|+|..|+.|+..+...|+ +|++.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 899998754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.95  E-value=0.56  Score=35.29  Aligned_cols=98  Identities=14%  Similarity=0.092  Sum_probs=54.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH--hcCC-----------ceEeCCCCCCccHHHHHHhhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK--NFGV-----------TEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~--~~g~-----------~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      +|-|+|.|.+|...+.-++..|+ .+++.++...+...++  ..+.           |.++..-. +....+.+......
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~-~~~~~~~~~~~~~~   79 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVT-PGVALGAARRAGRH   79 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSC-GGGHHHHHHHHHTT
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEec-CchHHHHHHhhccc
Confidence            57889999999999999899999 8888776655443332  2222           22221111 12233333333333


Q ss_pred             CccEEEEccC-CHHHHHHHHHHhccCCeEEEEeccC
Q 019139          264 GVDYSFECIG-NVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       264 g~d~v~d~~g-~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      .=+.++|++. ++.+...+...++.  ..++.++..
T Consensus        80 ~~~~~id~st~~p~~~~~l~~~~~~--~~~~d~~v~  113 (152)
T d1i36a2          80 VRGIYVDINNISPETVRMASSLIEK--GGFVDAAIM  113 (152)
T ss_dssp             CCSEEEECSCCCHHHHHHHHHHCSS--SEEEEEEEC
T ss_pred             CCceeeccCcCCHHHHHHHHHHHhc--cCCCccccc
Confidence            2245666655 33434455455544  346666653

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=90.85  E-value=0.2  Score=42.30  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCC---CCccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKD---HDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~---~~~~~~~~~~~~~~gg~d~  267 (345)
                      ....+|||+|.|. |..+..+++..+.++|.+++-+++-.+.++++-...  ..+...   ...+..+.+.+ +...+|+
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~-~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK-SENQYDV  151 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT-CCSCEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhh-cCCCCCE
Confidence            4457899998753 555666677777779999999999888887653110  000000   01233445543 3348998


Q ss_pred             EE-EccC---------CHHHHHHHHHHhccCCeEEEEec
Q 019139          268 SF-ECIG---------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+ |...         +..-++.+.+.|+++ |.++.-.
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            87 4322         234478888999998 9988754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.84  E-value=0.23  Score=38.76  Aligned_cols=48  Identities=15%  Similarity=0.108  Sum_probs=34.8

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      |.+...--++.+|+|+|+|+.+.+++..+...  .+|..+.|+.++.+.+
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAKD--NNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHccc--cceeeehhhhhHHHHH
Confidence            43333334678999999999999887666443  3899999998876654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.81  E-value=0.31  Score=42.29  Aligned_cols=33  Identities=27%  Similarity=0.315  Sum_probs=27.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ..|||+|+ |-+|...+..+...|+ .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57889998 9999999999999999 999998843

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.73  E-value=0.27  Score=42.30  Aligned_cols=98  Identities=15%  Similarity=0.035  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhc--CCCcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--DGGVD  266 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~--~gg~d  266 (345)
                      .+|++||=.++|. |.+++++|+ .+. .|++++.++...+.+++    .|.+.+-...   .+..+....+.  ++.||
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~---~d~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceee---ccHHHHhhhhHhhhcCCC
Confidence            4688998886643 444555554 344 89999999999888753    4554221111   23333333332  23899


Q ss_pred             EEEEccC-----C----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          267 YSFECIG-----N----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       267 ~v~d~~g-----~----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+--..     .          ...+..+++.|+|| |.++.+..
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~sc  262 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASC  262 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            8874211     1          12456777889998 99988765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=90.69  E-value=0.52  Score=36.46  Aligned_cols=43  Identities=23%  Similarity=0.239  Sum_probs=36.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV  240 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~  240 (345)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47789999999998888888899 89999999999887766554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.68  E-value=1.1  Score=33.87  Aligned_cols=95  Identities=16%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhH---HHHHHhcCCceEeCCCCCCc-cHH---------------
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK-PIQ---------------  254 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~--G~~~vi~~~~~~~~---~~~~~~~g~~~~i~~~~~~~-~~~---------------  254 (345)
                      +|.|.|+ |.+|.-++.+.+..  .+ +|++.+....-   .+.++++.+..++..++... .+.               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6889999 99999999999987  35 77776554432   33446788877766543100 011               


Q ss_pred             -HHHHhhcCC-CccEEEEccCCHHHHHHHHHHhccCCeEEE
Q 019139          255 -QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV  293 (345)
Q Consensus       255 -~~~~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v  293 (345)
                       +.+.++... .+|+++..+.+...+...+..++.+ -++.
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g-k~ia  121 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTIL  121 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC-CeEE
Confidence             122222333 7899999888777788888888885 5543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.67  E-value=0.21  Score=42.68  Aligned_cols=32  Identities=25%  Similarity=0.270  Sum_probs=28.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .++||+|+ |-+|...+..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899998 9999999999999999 89999874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.63  E-value=1.1  Score=33.58  Aligned_cols=39  Identities=28%  Similarity=0.395  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhH
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKK  231 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~~  231 (345)
                      ..+.+|.|+|+|.+|...+..+...+. ..++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            346789999999999998888887774 468889988876

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.49  E-value=0.097  Score=44.00  Aligned_cols=33  Identities=24%  Similarity=0.354  Sum_probs=29.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|+|+|+|+.|++++..++..|. +|+++++..+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 8999988653

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=90.48  E-value=0.62  Score=39.84  Aligned_cols=100  Identities=19%  Similarity=0.193  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc---eEeCCCC---CCccHHHHHHhhcCCCcc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---EFVNPKD---HDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~---~~i~~~~---~~~~~~~~~~~~~~gg~d  266 (345)
                      ...++|||+|.|. |..+-++++.....+|.+++.+++-.+.++++-..   ...+...   ...+..+.+.+ +...+|
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER-TEERYD  153 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH-CCCCEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhh-cCCccc
Confidence            4457899998753 55566666666666999999999988888764210   0011100   01344555554 345899


Q ss_pred             EEE-Ec---cC---------CHHHHHHHHHHhccCCeEEEEe
Q 019139          267 YSF-EC---IG---------NVSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       267 ~v~-d~---~g---------~~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|| |.   .+         +..-++.+.+.|+++ |.+++-
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            887 43   22         123467788999998 988754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.47  E-value=0.088  Score=43.08  Aligned_cols=74  Identities=23%  Similarity=0.318  Sum_probs=44.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEc
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC  271 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~-~~vi~~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~  271 (345)
                      +.+|||+|+ |-+|...++.+...|. .+|+++++++.+...-+.-..... .|..+    . +.+.+.. .++|+++.+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~----~-~~~~~~~-~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK----L-DDYASAF-QGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG----G-GGGGGGG-SSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc----c-ccccccc-ccccccccc
Confidence            368999998 9999999998888784 479998886543221111111111 12211    1 1122222 268999999


Q ss_pred             cCC
Q 019139          272 IGN  274 (345)
Q Consensus       272 ~g~  274 (345)
                      +|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            885

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.44  E-value=1.4  Score=33.76  Aligned_cols=96  Identities=17%  Similarity=0.140  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCC
Q 019139          191 KVEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       191 ~~~~g~~VlI~Ga--g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      .+.+|.+||=.++  |.+|   +. |...|+ .+++++.+++..+.++    .++...-+...+  .+............
T Consensus        38 ~~~~g~~vLDl~~G~G~~~---i~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~--~d~~~~~~~~~~~~  110 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVG---LE-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALP--VEVFLPEAKAQGER  110 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHH---HH-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSC--HHHHHHHHHHTTCC
T ss_pred             cccCCCeEEEeccccchhh---hh-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeee--hhcccccccccCCc
Confidence            4677888887755  4444   34 334688 7889999999888774    345533222222  12111122233348


Q ss_pred             ccEEE-Ec---cCCHHHHHHHHH--HhccCCeEEEE
Q 019139          265 VDYSF-EC---IGNVSVMRAALE--CCHKGWGTSVI  294 (345)
Q Consensus       265 ~d~v~-d~---~g~~~~~~~~~~--~l~~~~G~~v~  294 (345)
                      +|+|| |.   .+-...+..++.  .++++ |.+++
T Consensus       111 fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         111 FTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             EEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             cceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            99887 32   122233444443  47786 76664

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.39  E-value=0.55  Score=39.65  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCCC---CccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~i~~~~~---~~~~~~~~~~~~~gg~d~  267 (345)
                      ...++|||+|.|. |..+-.+++..+..+|++++-+++-.+.++++-..  ..++..+.   ..+..+.+.. +...+|+
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~~~yDv  154 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ-NQDAFDV  154 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-CSSCEEE
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhc-CCCCCCE
Confidence            4557899998753 45555666766677999999999988888765311  00111000   1234445543 3448998


Q ss_pred             EE-EccC---------CHHHHHHHHHHhccCCeEEEEec
Q 019139          268 SF-ECIG---------NVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       268 v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      |+ |...         +..-++.+.+.|+++ |.+++-.
T Consensus       155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         155 IITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             EEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            77 4322         112367777899998 9887754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=90.36  E-value=0.43  Score=39.76  Aligned_cols=34  Identities=18%  Similarity=0.170  Sum_probs=29.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -.+|||+|+ |-+|...+..+...|. .|++++++.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            457999998 9999999999999998 888887754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.34  E-value=0.13  Score=42.75  Aligned_cols=41  Identities=15%  Similarity=0.140  Sum_probs=31.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHH-HHHH--cCCCeEEEEcCChhHHHHH
Q 019139          194 PGSIVAVFGL-GTVGLAVAE-GAKA--AGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q-~a~~--~G~~~vi~~~~~~~~~~~~  235 (345)
                      .|.+++|+|+ +++|.+.++ +|+.  .|+ +|+.+++++++.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            4667788898 999998665 5553  688 899999999887655

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.09  E-value=0.64  Score=39.87  Aligned_cols=31  Identities=26%  Similarity=0.217  Sum_probs=27.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      ..|||+|+ |-+|...+..+...|+ +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            47899998 9999999999889999 8988864

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.09  E-value=0.15  Score=42.13  Aligned_cols=33  Identities=36%  Similarity=0.580  Sum_probs=28.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ..|||+|+ +++|.+.++.+...|+ +|+.+++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~   35 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRD   35 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence            35788988 9999999999999999 898888765

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.99  E-value=0.22  Score=35.93  Aligned_cols=35  Identities=23%  Similarity=0.290  Sum_probs=30.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .++++|+|+|.+|.-+++.++.+|. +|..+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4689999999999999999999999 8999877653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.89  E-value=0.77  Score=33.68  Aligned_cols=27  Identities=15%  Similarity=0.310  Sum_probs=22.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIG  224 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~  224 (345)
                      +|.|.|+ |-.|+...++++..+. .+++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~   29 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVL   29 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEE
Confidence            5889998 9999999999999998 4443

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=89.74  E-value=0.78  Score=34.97  Aligned_cols=88  Identities=16%  Similarity=0.126  Sum_probs=56.0

Q ss_pred             EEEEEcCChHHHH-HHHHHHHc-CCCeEEEEcCChhHHHHH-HhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          197 IVAVFGLGTVGLA-VAEGAKAA-GASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Gag~vG~~-a~q~a~~~-G~~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      +|.|+|+|..|.- .+...+.. +. .+++++.++++.+.+ ++++....+..      +.+    +....+|+|+-++.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~------~~~----ll~~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTD------YRD----VLQYGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSS------TTG----GGGGCCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhccccccccc------HHH----hcccccceeccccc
Confidence            5789999999854 55555555 45 667788887765554 55776543321      111    11126899998888


Q ss_pred             CHHHHHHHHHHhccCCeEEEEecc
Q 019139          274 NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ...-.+.+..++..+ -. +++.-
T Consensus        72 ~~~H~~~~~~al~~g-k~-V~~EK   93 (167)
T d1xeaa1          72 TDVHSTLAAFFLHLG-IP-TFVDK   93 (167)
T ss_dssp             GGGHHHHHHHHHHTT-CC-EEEES
T ss_pred             ccccccccccccccc-cc-cccCC
Confidence            766577788888875 44 55543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.71  E-value=0.2  Score=39.53  Aligned_cols=39  Identities=23%  Similarity=0.405  Sum_probs=33.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA  235 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~  235 (345)
                      .+|.|+|+|.+|...++++...|+ +|+..+.+++..+.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            468999999999998888888999 899999998876654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.60  E-value=0.61  Score=39.85  Aligned_cols=102  Identities=18%  Similarity=0.075  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc--eEeCCCC---CCccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKD---HDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~--~~i~~~~---~~~~~~~~~~~~~~gg~d~  267 (345)
                      ....+|||+|.|. |..+-.+++....++|.+++-+++-.+.++++-..  ..++...   .-.+..+.+++ ....+|+
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCE
Confidence            3457899998753 44455666666666999999999999988875321  0111111   01344555654 4458998


Q ss_pred             EEEccCC----------HHHHHHHHHHhccCCeEEEEecc
Q 019139          268 SFECIGN----------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       268 v~d~~g~----------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ||--+..          ..-++.+.+.|+++ |.++.-+.
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            8843222          22356777889997 99887653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.49  E-value=0.3  Score=36.16  Aligned_cols=39  Identities=28%  Similarity=0.358  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .++++.+++|+|+|.+|.-++..++.+|. +|..+++.+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            34667899999999999999999999999 8999877653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.40  E-value=0.37  Score=39.88  Aligned_cols=100  Identities=9%  Similarity=-0.067  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc-CCceEeCCCCCCccHHHHHHhh--cCCC
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQVLVDL--TDGG  264 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~--~~gg  264 (345)
                      +.....++.+||=+|+| +|..+.+++...+. .|++++.+++-.+.+++. .....+....  .++    .++  ..+.
T Consensus        87 ~~l~~~~~~~vLD~GcG-~G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~d~----~~~~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAG-IGRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL--ASM----ETATLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETCT-TTHHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE--SCG----GGCCCCSSC
T ss_pred             hhCCCCCCCeEEEeccc-CChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE--ccc----cccccCCCc
Confidence            44555677889989987 48888888877666 899999999988888753 2222222111  111    112  2347


Q ss_pred             ccEEEEccC-----CH---HHHHHHHHHhccCCeEEEEec
Q 019139          265 VDYSFECIG-----NV---SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d~v~d~~g-----~~---~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      +|+|+..-.     .+   ..+..+.+.|+++ |.+++.-
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            999886432     22   3367788889997 9988754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.36  E-value=0.29  Score=35.49  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ..++++|+|+|.+|.=.+++++.+|. +|..+.+++
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            34789999999999999999999999 888887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.25  E-value=1.3  Score=38.48  Aligned_cols=32  Identities=34%  Similarity=0.277  Sum_probs=28.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       195 g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      |.+|||+|+ |-+|...+..+...|+ +|+++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            578999998 9999999999999999 8999873

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.19  E-value=0.15  Score=38.61  Aligned_cols=77  Identities=10%  Similarity=-0.008  Sum_probs=45.8

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV  277 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~~  277 (345)
                      |-++|+|.+|...+..++..+. .+.+..++.++.+.+.+.+.....+..+.           . ...|+||=|+.... 
T Consensus         2 IgfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~-----------~-~~~DiVil~v~d~~-   67 (153)
T d2i76a2           2 LNFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKH-----------P-ELNGVVFVIVPDRY-   67 (153)
T ss_dssp             CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCC-----------C-C---CEEECSCTTT-
T ss_pred             EEEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhh-----------h-ccCcEEEEeccchh-
Confidence            3467999999988876655433 44567888888887776655433322220           0 24678888877644 


Q ss_pred             HHHHHHHhccC
Q 019139          278 MRAALECCHKG  288 (345)
Q Consensus       278 ~~~~~~~l~~~  288 (345)
                      +......++..
T Consensus        68 i~~v~~~l~~~   78 (153)
T d2i76a2          68 IKTVANHLNLG   78 (153)
T ss_dssp             HHHHHTTTCCS
T ss_pred             hhHHHhhhccc
Confidence            67777777643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.18  E-value=0.3  Score=35.56  Aligned_cols=34  Identities=21%  Similarity=0.440  Sum_probs=30.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ..+++|+|+|.+|.=.++++..+|. +|..+.+.+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            3689999999999999999999999 899887754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.11  E-value=0.19  Score=43.11  Aligned_cols=35  Identities=20%  Similarity=0.280  Sum_probs=31.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      ..+|+|+|||..|+.++..+...|. +|++++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            5789999999999999999998898 9999987653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.00  E-value=0.18  Score=41.15  Aligned_cols=32  Identities=44%  Similarity=0.543  Sum_probs=28.3

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      |+|+|+|+.|++++..+...|. +|+.+++.+.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7899999999999988889999 8999987653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.00  E-value=0.19  Score=40.14  Aligned_cols=32  Identities=25%  Similarity=0.307  Sum_probs=28.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|..|+.++..+...|. +|+++++++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            48899999999999999989998 899998875

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.91  E-value=0.18  Score=41.51  Aligned_cols=33  Identities=27%  Similarity=0.291  Sum_probs=29.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|+|+|+|+.|++++..+...|. +|+++++.+.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 8999998764

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=88.70  E-value=1.7  Score=36.67  Aligned_cols=99  Identities=16%  Similarity=0.159  Sum_probs=64.9

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHhcCCceEeCCCCC----------------
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH----------------  249 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~--~~~~~~~~~~~g~~~~i~~~~~----------------  249 (345)
                      +...+.++.+|+...+|.-|.+++..|+.+|.+-++++..  +..+.+.++.+|++.+......                
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            4455677777666677999999999999999965555543  4467777788998766422110                


Q ss_pred             -----------Cc--------cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc
Q 019139          250 -----------DK--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH  286 (345)
Q Consensus       250 -----------~~--------~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~  286 (345)
                                 ..        ....++.+..++.+|.++.++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       00        01123333444578999999998766666666554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=88.66  E-value=0.48  Score=40.50  Aligned_cols=74  Identities=20%  Similarity=0.236  Sum_probs=44.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC-CCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-DHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|||+|+ |-+|...++.+...|.-.|++++....+...+.+..--.++..+ ....++.+...    .++|+|+.+++-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~----~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV----KKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH----HHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH----hCCCcccccccc
Confidence            5899998 99999999888888843899987765544333222111122211 11123333222    268999998774

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.59  E-value=0.68  Score=36.76  Aligned_cols=73  Identities=25%  Similarity=0.366  Sum_probs=46.8

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCc-eEeCCCCCCccHHHHHHhhcCCC
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +....++ .|++||=.|+|. |.+++. |...|+.+|++++.+++..+.+++.-.. .++..     ++    .+ ..+.
T Consensus        41 ~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~-----D~----~~-l~~~  107 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA-----DV----SE-ISGK  107 (197)
T ss_dssp             HHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC-----CG----GG-CCCC
T ss_pred             HHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE-----eh----hh-cCCc
Confidence            3345555 589999998853 555543 4557776899999999998888764322 22221     11    11 2358


Q ss_pred             ccEEEEc
Q 019139          265 VDYSFEC  271 (345)
Q Consensus       265 ~d~v~d~  271 (345)
                      +|+|+-.
T Consensus       108 fD~Vi~N  114 (197)
T d1ne2a_         108 YDTWIMN  114 (197)
T ss_dssp             EEEEEEC
T ss_pred             ceEEEeC
Confidence            9999865

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=88.52  E-value=0.85  Score=39.04  Aligned_cols=37  Identities=27%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 019139          194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      ...+|+|+|+ |.+|...+..+...|+ +|+++.++..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            3578999998 9999999999999999 88888876543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.51  E-value=0.32  Score=34.89  Aligned_cols=34  Identities=24%  Similarity=0.339  Sum_probs=30.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .++++|+|+|.+|.-+++.++.+|. +|..+++.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            3789999999999999999999999 898887754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.49  E-value=0.28  Score=42.51  Aligned_cols=76  Identities=20%  Similarity=0.231  Sum_probs=46.3

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEE
Q 019139          192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE  270 (345)
Q Consensus       192 ~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d  270 (345)
                      .+.+-+|||+|+ |-+|...+..+...|+ .|+++++....... .......+...+-  .+.. .+.+.. .++|.|+.
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D~--~~~~-~~~~~~-~~~d~Vih   85 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVDL--RVME-NCLKVT-EGVDHVFN   85 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECCT--TSHH-HHHHHH-TTCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchh-hhcccCcEEEeec--hhHH-HHHHHh-hcCCeEee
Confidence            356789999998 9999999999999999 89988764432111 1112222222211  1222 222222 36899998


Q ss_pred             ccC
Q 019139          271 CIG  273 (345)
Q Consensus       271 ~~g  273 (345)
                      +++
T Consensus        86 ~a~   88 (363)
T d2c5aa1          86 LAA   88 (363)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.36  E-value=1.2  Score=34.51  Aligned_cols=83  Identities=12%  Similarity=0.114  Sum_probs=48.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCCceEeCCC--C----CCccHHHHHHhhcCCCccEE
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPK--D----HDKPIQQVLVDLTDGGVDYS  268 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~~~~i~~~--~----~~~~~~~~~~~~~~gg~d~v  268 (345)
                      +|.|+|+|..|.+.+..+...|. +|..+.+..+  ..+..++-.-...+...  .    ...+..+.+     ...|++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            58899999999998888888888 8888876433  33333322111000000  0    012222222     258999


Q ss_pred             EEccCCHHHHHHHHHHhc
Q 019139          269 FECIGNVSVMRAALECCH  286 (345)
Q Consensus       269 ~d~~g~~~~~~~~~~~l~  286 (345)
                      +-++.+.. +...++.+.
T Consensus        76 i~avps~~-~~~~~~~l~   92 (180)
T d1txga2          76 LLGVSTDG-VLPVMSRIL   92 (180)
T ss_dssp             EECSCGGG-HHHHHHHHT
T ss_pred             hcccchhh-hHHHHHhhc
Confidence            99998755 566665544

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.34  E-value=0.31  Score=38.30  Aligned_cols=84  Identities=27%  Similarity=0.336  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.++....       +.....      .++.+.+.     ..|+++-++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~------~~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT------NSLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB------SCSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee------echhhhhh-----ccchhhcccc
Confidence            47899999999999999999999999 99999876431       111110      12222222     4677776654


Q ss_pred             C-HHH----HHHHHHHhccCCeEEEEecc
Q 019139          274 N-VSV----MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 ~-~~~----~~~~~~~l~~~~G~~v~~G~  297 (345)
                      - +.+    -...+..++++ ..++.+|-
T Consensus       102 l~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccceeeecccc-ceEEeccc
Confidence            2 111    25677788887 88887764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.21  Score=38.69  Aligned_cols=30  Identities=27%  Similarity=0.199  Sum_probs=27.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      .|+|+|+|+.|+.|+..|...|. +|+.+++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            48899999999999999999999 7888875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.28  E-value=0.23  Score=39.70  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+.+|.|+|.|.+|...+++++.+|+ +|++.++...+.       ....+..    .++.+.+..     .|++.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-------DHPDFDY----VSLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-------CCTTCEE----CCHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchh-------hhcchhH----HHHHHHHHh-----cccceeeec
Confidence            46799999999999999999999999 999998754321       0000111    123333332     576666544


Q ss_pred             -CHH----HHHHHHHHhccCCeEEEEeccCCCCCceecChhhhc---cccEEEEeeecCC
Q 019139          274 -NVS----VMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV---TGRVWKGTAFGGF  325 (345)
Q Consensus       274 -~~~----~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~---~~~~i~g~~~~~~  325 (345)
                       .+.    .-...+..|+++ ..++-++-.   .-  ++-..++   .+-+|.|..+.-+
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG---~v--vde~aL~~aL~~g~i~ga~lDV~  160 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTARP---NL--IDTQAMLSNLKSGKLAGVGIDTY  160 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECSCT---TS--BCHHHHHHHHHTTSEEEEEESSC
T ss_pred             ccccccccccHHHhhccCCc-eEEEecccH---hh--hhhHHHHHHHhcCCcceEecccc
Confidence             221    135677889997 888877652   22  3333333   3556666655544

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.12  E-value=0.16  Score=42.05  Aligned_cols=31  Identities=35%  Similarity=0.468  Sum_probs=28.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      +|+|+|+|..|+.++..+...|+ +|++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            48999999999999999999999 89999875

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.09  E-value=1  Score=38.01  Aligned_cols=102  Identities=12%  Similarity=0.074  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCC---CCccHHHHHHhhcCCCccE
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKD---HDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~---~~~~~~~~~~~~~~gg~d~  267 (345)
                      ....+|||+|.|. |..+-.+++..+.++|++++-+++-.+.++++....  .++...   ...+..+.+.+ ....+|+
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yDv  165 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK-FKNEFDV  165 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-CSSCEEE
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhc-CCCCCCE
Confidence            3457899998743 444556666666668999999999888887643210  000000   01233444443 3348998


Q ss_pred             EE-EccC----------CHHHHHHHHHHhccCCeEEEEecc
Q 019139          268 SF-ECIG----------NVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       268 v~-d~~g----------~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      || |...          +..-++.+.+.|+++ |.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            87 4321          224467888899998 99887543

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.07  E-value=0.22  Score=39.76  Aligned_cols=32  Identities=25%  Similarity=0.236  Sum_probs=28.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47889999999999999999999 899987653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.94  E-value=0.32  Score=35.41  Aligned_cols=33  Identities=21%  Similarity=0.079  Sum_probs=28.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .++++|+|+|.+|.-.+++++.+|. +|..+.++
T Consensus        20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            3679999999999999999999999 78777654

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.89  E-value=0.74  Score=34.67  Aligned_cols=93  Identities=14%  Similarity=0.063  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhcCCCccE
Q 019139          194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY  267 (345)
Q Consensus       194 ~g~~VlI~Ga--g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~  267 (345)
                      .|.+||=.++  |.+|+   .+ ..+|+++|+.++.+.+..+.++    .++...-+..-.  .+..+.+. ...+.+|+
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~--~D~~~~l~-~~~~~fDi   86 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK--MEAERAID-CLTGRFDL   86 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC--SCHHHHHH-HBCSCEEE
T ss_pred             CCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc--cccccccc-ccccccce
Confidence            5777777755  54544   43 3468889999999988876654    355543221111  23444443 34458998


Q ss_pred             EEEccC-CHHHHHHHHH------HhccCCeEEEE
Q 019139          268 SFECIG-NVSVMRAALE------CCHKGWGTSVI  294 (345)
Q Consensus       268 v~d~~g-~~~~~~~~~~------~l~~~~G~~v~  294 (345)
                      ||--.. ........+.      .|+++ |.+++
T Consensus        87 If~DPPy~~~~~~~~l~~i~~~~~L~~~-g~iii  119 (152)
T d2esra1          87 VFLDPPYAKETIVATIEALAAKNLLSEQ-VMVVC  119 (152)
T ss_dssp             EEECCSSHHHHHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             eEechhhccchHHHHHHHHHHCCCcCCC-eEEEE
Confidence            884322 2222333333      35665 66654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.82  E-value=0.34  Score=36.90  Aligned_cols=36  Identities=36%  Similarity=0.341  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~-~vi~~~~~~  229 (345)
                      +|.+|+|+|+|..|+.+++.++.++.. +|+.++..+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999999888742 678877655

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.79  E-value=0.25  Score=42.08  Aligned_cols=33  Identities=27%  Similarity=0.234  Sum_probs=29.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      .|+|+|||..|++++..++..|. +++++++.++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            58899999999999999999999 8999987653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.74  E-value=0.31  Score=41.30  Aligned_cols=44  Identities=25%  Similarity=0.283  Sum_probs=33.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHhcCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGV  240 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~--~~~~~~~~g~  240 (345)
                      .+|||+|+ |-+|...+..+...|+ +|+++++...  ..+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            47999998 9999999999888899 8999887542  2344444443

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.56  E-value=1  Score=37.65  Aligned_cols=99  Identities=19%  Similarity=0.191  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCC-ce-Ee----CCCCC-----CccHHHHHHhhc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE-FV----NPKDH-----DKPIQQVLVDLT  261 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~-~i----~~~~~-----~~~~~~~~~~~~  261 (345)
                      .+..+|||+|+|. |..+-.+++ ....+|.+++-+++-.+.++++.. .. ..    ...+.     ..+..+.+++  
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~-~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~--  146 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQ-HDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--  146 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTT-SCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--
T ss_pred             CCCceEEEecCCc-hHHHHHHHH-hCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc--
Confidence            4557899998753 333344444 455589999999998888876431 10 00    00000     1234445543  


Q ss_pred             CCCccEEE-EccCC---------HHHHHHHHHHhccCCeEEEEec
Q 019139          262 DGGVDYSF-ECIGN---------VSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       262 ~gg~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ..++|+|| |....         ..-++.+.+.|+++ |.++.-+
T Consensus       147 ~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         147 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            35899877 44321         23477788899998 9887644

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.48  E-value=0.13  Score=41.58  Aligned_cols=99  Identities=16%  Similarity=0.040  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcC----CceEeCCCCCCccHHHHHHhhcCCCcc
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNPKDHDKPIQQVLVDLTDGGVD  266 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g----~~~~i~~~~~~~~~~~~~~~~~~gg~d  266 (345)
                      ...++.+||=+|+| .|..+..+++..+. +|++++.+++-.+.+++.-    ...+ ....  .++.+ + ....+.+|
T Consensus        57 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~--~d~~~-~-~~~~~~fD  129 (222)
T d2ex4a1          57 NKTGTSCALDCGAG-IGRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVR-NYFC--CGLQD-F-TPEPDSYD  129 (222)
T ss_dssp             -CCCCSEEEEETCT-TTHHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEE-EEEE--CCGGG-C-CCCSSCEE
T ss_pred             CCCCCCEEEEeccC-CCHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccc-cccc--ccccc-c-cccccccc
Confidence            45677889999986 47777777766665 8999999999888886532    2111 1110  11110 0 11234789


Q ss_pred             EEEEc-----cCCH---HHHHHHHHHhccCCeEEEEecc
Q 019139          267 YSFEC-----IGNV---SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       267 ~v~d~-----~g~~---~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      +|+..     +..+   ..+..+.+.|+++ |.+++.-.
T Consensus       130 ~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         130 VIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            98863     2222   3577788899997 99987743

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.46  E-value=1.4  Score=33.92  Aligned_cols=90  Identities=17%  Similarity=0.185  Sum_probs=54.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhHHHH-HHhcCCceE-eCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDR-AKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~-G~~~vi~-~~~~~~~~~~-~~~~g~~~~-i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      ++.|+|+|.+|...++..+.. +. .+++ .+.++++.+. +++++.... -.+    .++.+.+.   ...+|+|+-++
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~---~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLE---DPEIDALYVPL   74 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHH---CTTCCEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec----CcHHHhhh---ccccceeeecc
Confidence            578899999998888877776 55 6665 4666665443 455654211 011    12333322   23688888887


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEec
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      ....-.+.+..++..+ - =+++.
T Consensus        75 p~~~h~~~~~~~l~~g-~-~v~~E   96 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEKG-K-HILLE   96 (184)
T ss_dssp             CGGGHHHHHHHHHTTT-C-EEEEC
T ss_pred             cchhhcchhhhhhhcc-c-eeecc
Confidence            7665577777777764 3 34454

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.46  E-value=0.29  Score=35.70  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      ..++++|+|+|-+|+=.+++.+.+|. +|..+.+++.
T Consensus        24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            35789999999999999999999999 8999877654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.42  E-value=0.41  Score=39.46  Aligned_cols=33  Identities=36%  Similarity=0.483  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            478999999999999999999999999 888765

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.29  E-value=0.46  Score=34.58  Aligned_cols=33  Identities=15%  Similarity=0.152  Sum_probs=30.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .+++|+|+|.+|.-.++.++.+|. +|+.+.+++
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            689999999999999999999999 899987764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.29  E-value=0.46  Score=37.72  Aligned_cols=41  Identities=37%  Similarity=0.575  Sum_probs=35.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhc
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF  238 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~  238 (345)
                      +|.|+|+|-+|+..+..+...|. +|+++|.++++.+.+++-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            47889999999998888888899 999999999998887653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=87.20  E-value=0.33  Score=40.85  Aligned_cols=36  Identities=31%  Similarity=0.355  Sum_probs=30.8

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChh
Q 019139          194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPK  230 (345)
Q Consensus       194 ~g~~VlI~Ga-g--~vG~~a~q~a~~~G~~~vi~~~~~~~  230 (345)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+...+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            5789999997 5  899999999999999 8888777654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.20  E-value=0.43  Score=34.90  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      +..++++|+|+|.+|.=.+++.+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            345789999999999999999999999 898887653

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=87.07  E-value=1.1  Score=36.42  Aligned_cols=95  Identities=17%  Similarity=0.186  Sum_probs=58.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc-eE-eCCCCCCccHHHHHHhh-cCCC
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EF-VNPKDHDKPIQQVLVDL-TDGG  264 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~-~~-i~~~~~~~~~~~~~~~~-~~gg  264 (345)
                      .+++++||=+|+|. |..+..+++. |...|+++|.+++.++.+++    .+.. .+ +...+    ..  -..+ .++.
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D----~~--~~~~~~~~~   93 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD----SY--GRHMDLGKE   93 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC----TT--TSCCCCSSC
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc----hh--hhccccccc
Confidence            57899999999864 5566677665 44489999999998887753    3322 11 11111    00  0011 2237


Q ss_pred             ccEEEEccCC------H----HHHHHHHHHhccCCeEEEEe
Q 019139          265 VDYSFECIGN------V----SVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       265 ~d~v~d~~g~------~----~~~~~~~~~l~~~~G~~v~~  295 (345)
                      +|+|+..-.-      .    ..+..+.+.|+|+ |+++..
T Consensus        94 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          94 FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             EEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            9999864332      1    2355666789997 998763

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.91  E-value=0.14  Score=40.22  Aligned_cols=35  Identities=23%  Similarity=0.157  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      ++..|+|+|+|+.|+.|+..+.++|. +|+.+++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            34579999999999999999999999 788887543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.89  E-value=1.9  Score=36.63  Aligned_cols=99  Identities=10%  Similarity=0.050  Sum_probs=61.2

Q ss_pred             cCCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCc--eE-eCCCCCCccHHHHHHhh
Q 019139          190 AKVEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EF-VNPKDHDKPIQQVLVDL  260 (345)
Q Consensus       190 ~~~~~g~~VlI~Ga--g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~--~~-i~~~~~~~~~~~~~~~~  260 (345)
                      ..+.+|++||=..+  |+.++   .+ ...|++.|+.++.++...+.+++    .|.+  .+ +..    .+..+.+..+
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl---~a-a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~----~d~~~~l~~~  211 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSV---AA-AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV----MDVFDYFKYA  211 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHH---HH-HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE----SCHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHH---HH-HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE----ccHHHHHHHH
Confidence            44678999987744  55443   33 34688789999999998887763    2321  11 111    2344444443


Q ss_pred             c-CC-CccEEE-EccCC--------------HHHHHHHHHHhccCCeEEEEecc
Q 019139          261 T-DG-GVDYSF-ECIGN--------------VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~-~g-g~d~v~-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      . .+ .||+|| |.-.-              ...+..++++|+|+ |.++.+..
T Consensus       212 ~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~sc  264 (317)
T d2b78a2         212 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTN  264 (317)
T ss_dssp             HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             HhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            2 23 899777 42110              13567788899997 99987764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=86.85  E-value=0.91  Score=37.88  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHh----cCCceEeCCCCCCccHHHHHHhhcCC
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG  263 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~~~~g  263 (345)
                      .++.+..+||=+|+| .|..+..+++..  +. +|++++.++...+.+++    .+.+..+...+. .++      ...+
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~-~~~------~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGDA-TEI------ELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT-TTC------CCSS
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCC-EEEEEecchhHhhhhhccccccccccccccccc-ccc------cccC
Confidence            356777899989997 488888888875  45 89999999988777653    343322221110 010      1124


Q ss_pred             CccEEEEcc-----CCH-HHHHHHHHHhccCCeEEEEec
Q 019139          264 GVDYSFECI-----GNV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       264 g~d~v~d~~-----g~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      .+|+|+..-     ..+ ..++.+.+.|+|+ |++++.-
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            799998643     222 4578888999998 9988754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.27  E-value=0.29  Score=39.01  Aligned_cols=31  Identities=23%  Similarity=0.235  Sum_probs=27.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      -|+|+|+|+.|+.++..|..+|. +|+.+++.
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37889999999999999999999 89888875

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.25  E-value=0.31  Score=36.77  Aligned_cols=32  Identities=19%  Similarity=0.280  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      .|.+|||+|+|.+|.--+..+...|+ +|+++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVS   43 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEe
Confidence            57899999999999999999999999 888874

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.05  E-value=0.36  Score=38.34  Aligned_cols=30  Identities=27%  Similarity=0.317  Sum_probs=27.1

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      |+|+|+|+.|+.++..|.++|. +|+.+++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7788999999999999999999 88888765

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.83  E-value=0.36  Score=38.64  Aligned_cols=32  Identities=22%  Similarity=0.235  Sum_probs=27.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|+.|+.|+..|..+|. +|+.++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47889999999999999999999 888888653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.79  E-value=0.54  Score=34.00  Aligned_cols=35  Identities=26%  Similarity=0.285  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .+.+++|+|+|.+|.-+++.+..+|. +|+.+++.+
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            45789999999999999999999999 898887654

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=85.74  E-value=0.7  Score=37.10  Aligned_cols=95  Identities=9%  Similarity=0.013  Sum_probs=57.3

Q ss_pred             cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhh-cCCCccEE
Q 019139          190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL-TDGGVDYS  268 (345)
Q Consensus       190 ~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~~gg~d~v  268 (345)
                      .+..++.+||=+|+|. |..+..+++ .|. +|++++.+++..+.+++-..+.+-....   ++    .+. ..+.+|+|
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~---~~----~~~~~~~~fD~I   85 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHS---RF----EDAQLPRRYDNI   85 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEES---CG----GGCCCSSCEEEE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccc---cc----cccccccccccc
Confidence            3344567899899863 666666654 577 8999999999999887643322111111   11    111 22479988


Q ss_pred             EEc-----cCCHH-HHHHHH-HHhccCCeEEEEe
Q 019139          269 FEC-----IGNVS-VMRAAL-ECCHKGWGTSVIV  295 (345)
Q Consensus       269 ~d~-----~g~~~-~~~~~~-~~l~~~~G~~v~~  295 (345)
                      +-.     +..+. .+..+. ++|+++ |.+++.
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            743     22333 245555 568997 888763

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=85.71  E-value=0.23  Score=43.42  Aligned_cols=31  Identities=26%  Similarity=0.310  Sum_probs=26.3

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      +|||+|+ |-+|...+..+...|++.|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6899998 999999999998899866777764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.69  E-value=3.6  Score=31.82  Aligned_cols=104  Identities=28%  Similarity=0.377  Sum_probs=64.2

Q ss_pred             hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce--EeCCCCCCccHHHHHHhhcCCC
Q 019139          188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGG  264 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~--~i~~~~~~~~~~~~~~~~~~gg  264 (345)
                      +...+++|.+ +|-++ |+=|+.. .+++. +. +|+++|+.++....+++.-...  .++..-  .++.+.+..+..+.
T Consensus        12 ~~l~~~~g~~-~vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f--~~~~~~l~~~~~~~   85 (182)
T d1wg8a2          12 DLLAVRPGGV-YVDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF--RHLKRHLAALGVER   85 (182)
T ss_dssp             HHHTCCTTCE-EEETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG--GGHHHHHHHTTCSC
T ss_pred             HhcCCCCCCE-EEEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH--HHHHHHHHHcCCCc
Confidence            4445678776 45554 5445543 34443 55 8999999999988887643222  222222  44555555554457


Q ss_pred             ccEEEEccCCH---------------HHHHHHHHHhccCCeEEEEeccC
Q 019139          265 VDYSFECIGNV---------------SVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       265 ~d~v~d~~g~~---------------~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                      +|.|+=-.|-+               ..+...++.++++ |+++++...
T Consensus        86 vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh  133 (182)
T d1wg8a2          86 VDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH  133 (182)
T ss_dssp             EEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred             cCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence            98665333421               1367778889997 999988874

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.68  E-value=0.35  Score=38.67  Aligned_cols=31  Identities=19%  Similarity=0.227  Sum_probs=28.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .++|+|+|+.|+.++..|..+|. +|+.++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47888999999999999999999 89999865

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.55  E-value=0.32  Score=41.17  Aligned_cols=31  Identities=29%  Similarity=0.411  Sum_probs=27.8

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      |+|+|+|..|+.++..++..|. +|+++++++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7889999999999999999999 899998654

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.51  E-value=0.4  Score=38.60  Aligned_cols=32  Identities=28%  Similarity=0.266  Sum_probs=28.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|+.|+.++..|..+|. +|+.+++.+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47888999999999999999999 899998654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.50  E-value=0.63  Score=38.54  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      -.|.+|+|.|.|.+|..+++++...|+ +|+++.
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            467899999999999999999999999 777764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=85.28  E-value=1.5  Score=35.84  Aligned_cols=103  Identities=17%  Similarity=0.099  Sum_probs=62.6

Q ss_pred             HHhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HhcCCceEeCCCCCCccHHHHHHhhc
Q 019139          186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLT  261 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~  261 (345)
                      +.....+++..+||=+|+| .|..+..+++...--++++++.++ ..+.+    .+.+....+....  .++    .+..
T Consensus        72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~~-~~~~a~~~~~~~~~~~rv~~~~--~D~----~~~~  143 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMAG-TVDTARSYLKDEGLSDRVDVVE--GDF----FEPL  143 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECTT-HHHHHHHHHHHTTCTTTEEEEE--CCT----TSCC
T ss_pred             HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCHH-HHHHHHHHHHHhhcccchhhcc--ccc----hhhc
Confidence            4566677888899989886 488888999887433888888743 33333    3344321111111  111    0112


Q ss_pred             CCCccEEEEcc-----CCH---HHHHHHHHHhccCCeEEEEecc
Q 019139          262 DGGVDYSFECI-----GNV---SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       262 ~gg~d~v~d~~-----g~~---~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      ..++|+|+-..     ..+   ..++.+.+.|+|+ |+++++-.
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            23789887432     122   3467888899998 99998754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.10  E-value=1.5  Score=32.01  Aligned_cols=88  Identities=16%  Similarity=0.267  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCh--HH------HH---HHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcC
Q 019139          194 PGSIVAVFGLGT--VG------LA---VAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD  262 (345)
Q Consensus       194 ~g~~VlI~Gag~--vG------~~---a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  262 (345)
                      .-.+|||+|+|+  +|      .+   ++..+|..|+ +++.+..+.+....-... +|+++...-    ..+.+.+...
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePl----t~e~v~~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPI----HWEVVRKIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCC----CHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecC----CHHHHHHHHH
Confidence            457899999876  22      44   4444556699 788888887753221111 233332211    1222333222


Q ss_pred             C-CccEEEEccCCHHHHHHHHHHhcc
Q 019139          263 G-GVDYSFECIGNVSVMRAALECCHK  287 (345)
Q Consensus       263 g-g~d~v~d~~g~~~~~~~~~~~l~~  287 (345)
                      . +.|.++-..|+...++...++.+.
T Consensus        80 ~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          80 KERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             HhCcCCeEEEeeeehHhHHHHHHHHc
Confidence            2 677777777776656555555443

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.08  E-value=0.93  Score=37.57  Aligned_cols=102  Identities=7%  Similarity=-0.003  Sum_probs=57.9

Q ss_pred             CCCCCCEEEEEcCChHHHHHHHHHHHc-------CCCeEEEEcCChhHHHHHHhcCC------ceEeCCCCCCccHHHH-
Q 019139          191 KVEPGSIVAVFGLGTVGLAVAEGAKAA-------GASRVIGIDIDPKKFDRAKNFGV------TEFVNPKDHDKPIQQV-  256 (345)
Q Consensus       191 ~~~~g~~VlI~Gag~vG~~a~q~a~~~-------G~~~vi~~~~~~~~~~~~~~~g~------~~~i~~~~~~~~~~~~-  256 (345)
                      ..++.-+||=+|+|. |.++..+++.+       +. .+++++.++.-++.+++.-.      ...++...  .++.+. 
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~-~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~  112 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQ  112 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEE-EEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCce-EEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhc
Confidence            344555788888853 44544444432       23 57899999988777764211      11122221  122221 


Q ss_pred             --HHh-hcCCCccEEEEcc-----CC-HHHHHHHHHHhccCCeEEEEecc
Q 019139          257 --LVD-LTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       257 --~~~-~~~gg~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                        ... ...+.+|+|+-.-     .. ..++..+.+.|+|+ |.+++.-.
T Consensus       113 ~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         113 SRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             chhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence              111 2234899988632     23 35688899999998 98877643

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.03  E-value=0.69  Score=35.05  Aligned_cols=37  Identities=27%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .-+++|+|+|+|-+|.=++..+.+.|++.|+.+.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3467899999999999999999999997888876543

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.93  E-value=5.1  Score=33.17  Aligned_cols=99  Identities=17%  Similarity=0.211  Sum_probs=64.0

Q ss_pred             hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHhcCCceEeCCCCC----------------
Q 019139          188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKDH----------------  249 (345)
Q Consensus       188 ~~~~~~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~--~~~~~~~~~~~~g~~~~i~~~~~----------------  249 (345)
                      +....+++.+|+..++|..|.+++..|+.+|.+-++++.  .++.+.+.++.+|++.+......                
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            455667777766667799999999999999985555443  35567777888888754321110                


Q ss_pred             -----------Cc--------cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhc
Q 019139          250 -----------DK--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH  286 (345)
Q Consensus       250 -----------~~--------~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~~~l~  286 (345)
                                 +.        .+..++.+..++.+|.++-++|+..++.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                       00        11233344444578999999998665655555554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=84.89  E-value=0.82  Score=34.64  Aligned_cols=40  Identities=18%  Similarity=0.120  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 019139          193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF  232 (345)
Q Consensus       193 ~~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~  232 (345)
                      ++..+|.|+|+|.+|...+.++...+..+++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            5567899999999999888888888876889998877653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.87  E-value=4  Score=34.44  Aligned_cols=107  Identities=19%  Similarity=0.164  Sum_probs=65.6

Q ss_pred             hhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEE--cCChhHHHHHHhcCCceEeCCCCC---------------
Q 019139          188 NTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVNPKDH---------------  249 (345)
Q Consensus       188 ~~~~~~~g~~VlI~-Gag~vG~~a~q~a~~~G~~~vi~~--~~~~~~~~~~~~~g~~~~i~~~~~---------------  249 (345)
                      +...++.+...+|. .+|..|.+.+.+++.+|..-++++  ..++.+.+.++.+|++.++.....               
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            45556666555555 559999999999999998444443  245678888899999755322110               


Q ss_pred             ------------Cc-------cHHHHHHhhcCCCccEEEEccCCHHHHHHHH---HHhccCCeEEEEe
Q 019139          250 ------------DK-------PIQQVLVDLTDGGVDYSFECIGNVSVMRAAL---ECCHKGWGTSVIV  295 (345)
Q Consensus       250 ------------~~-------~~~~~~~~~~~gg~d~v~d~~g~~~~~~~~~---~~l~~~~G~~v~~  295 (345)
                                  +.       ....++.+...+.+|.++-++|+..++.-..   +...+. -+++.+
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igv  203 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGV  203 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeecc
Confidence                        00       0112333333447899999998766554444   444554 566554

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.83  E-value=0.42  Score=37.39  Aligned_cols=32  Identities=16%  Similarity=0.065  Sum_probs=27.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+|+|+|+|+.|+.++..+.++|. ++++++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            579999999999999999999999 77777643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.74  E-value=0.44  Score=39.21  Aligned_cols=32  Identities=19%  Similarity=0.149  Sum_probs=28.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .|+|+|+|.+|+.++-.+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 899998754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.60  E-value=0.36  Score=40.92  Aligned_cols=32  Identities=22%  Similarity=0.260  Sum_probs=28.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .|+|+|||..|+.++..+...|. +|++++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 899998764

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.46  E-value=0.46  Score=39.82  Aligned_cols=33  Identities=24%  Similarity=0.452  Sum_probs=27.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .|+|+|+|.+|++++..+...|.++|+++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            589999999999877777778865799998753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=84.41  E-value=3.5  Score=31.47  Aligned_cols=99  Identities=19%  Similarity=0.164  Sum_probs=54.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHHHhcCCc-----eEeCCCCC-------CccH--HHHHHhh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVT-----EFVNPKDH-------DKPI--QQVLVDL  260 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~--~~~~~~~~~~g~~-----~~i~~~~~-------~~~~--~~~~~~~  260 (345)
                      +|.|-|-|-+|++..+++...+. +++++.-.  .+...++.++.-.     .-+...+.       .-.+  .....++
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            57888999999999998888888 66665432  2333444332110     00000000       0000  0001111


Q ss_pred             cC-C-CccEEEEccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          261 TD-G-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       261 ~~-g-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .. . ++|+|+||+|.-.+.+.+...+..+ .+=|++..
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSA  118 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITA  118 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESS
T ss_pred             cccccCCceeEeccccccchHHhhhhhccc-cceeeecc
Confidence            11 2 8999999999765566777777776 44444544

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.37  E-value=0.41  Score=36.78  Aligned_cols=27  Identities=33%  Similarity=0.506  Sum_probs=24.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGAS  220 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~  220 (345)
                      ++++|+|+|+|.+|.-++..++.+|.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence            578999999999999999999999984

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.11  E-value=0.35  Score=41.25  Aligned_cols=32  Identities=28%  Similarity=0.282  Sum_probs=26.0

Q ss_pred             EEEEEcCChHHHHHHHHHH-----HcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAK-----AAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~-----~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|+.|++++.++.     ..|. +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            4889999999999777763     5789 899998754

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=83.70  E-value=0.5  Score=37.44  Aligned_cols=31  Identities=26%  Similarity=0.232  Sum_probs=27.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      -|+|+|+|+-|+.|+..|...|. +|++++..
T Consensus         5 DviIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           5 DVIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            37888999999999999999999 89998764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=83.63  E-value=0.41  Score=39.58  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=29.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      .+|||+|+ |-+|...+..+...|+ +|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            67999998 9999999999999999 899988754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.62  E-value=0.69  Score=39.06  Aligned_cols=32  Identities=28%  Similarity=0.417  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      .|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 888775

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.53  E-value=0.83  Score=35.81  Aligned_cols=39  Identities=36%  Similarity=0.436  Sum_probs=32.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN  237 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~  237 (345)
                      +|.|+|.|-+|+..+.++ +.|+ +|+++|.++++.+.++.
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999876655 5799 99999999999887764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=83.14  E-value=6.5  Score=29.82  Aligned_cols=130  Identities=14%  Similarity=0.041  Sum_probs=73.3

Q ss_pred             EEEEEcCChHHHH-HHHHHHHcCCC-eEEE-EcCChhHHHH-HHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 019139          197 IVAVFGLGTVGLA-VAEGAKAAGAS-RVIG-IDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI  272 (345)
Q Consensus       197 ~VlI~Gag~vG~~-a~q~a~~~G~~-~vi~-~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~  272 (345)
                      +|.|+|+|..|.- .+...+...-. ++++ +++++++.+. +++++...++.      ++.+.+.   ...+|+|+-++
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeecccc---ccccceeeccc
Confidence            5789999999864 56666655421 5554 5676666554 45677655432      2333332   23799999888


Q ss_pred             CCHHHHHHHHHHhccCCeEEEEeccCCCCCceecChhh------hcc--ccEE-EEeeecCCc-ccccHHHHHHHHhccc
Q 019139          273 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ------LVT--GRVW-KGTAFGGFK-SRSQVPWLVDKYMKKV  342 (345)
Q Consensus       273 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~------~~~--~~~i-~g~~~~~~~-~~~~~~~~~~~~~~g~  342 (345)
                      ....-...+..++..+  .=|++.-     ++..+..+      +.+  ++.+ .|.. ..+. ....+.++.+++++|+
T Consensus        76 p~~~h~~~~~~al~~g--k~V~~EK-----Pl~~~~~e~~~l~~~~~~~~~~~~v~~~-~R~~~~~~~~~~~~~~i~~G~  147 (181)
T d1zh8a1          76 PVELNLPFIEKALRKG--VHVICEK-----PISTDVETGKKVVELSEKSEKTVYIAEN-FRENSYQKEFEDFYQVVAEGK  147 (181)
T ss_dssp             CGGGHHHHHHHHHHTT--CEEEEES-----SSSSSHHHHHHHHHHHHHCSSCEEEECG-GGCCHHHHHHHHHHHHHHSCC
T ss_pred             cccccccccccccccc--hhhhcCC-----CCcCCHHHHHHHHHHHHHhCCeEEEEee-ccccccCHHHHHHHHHHHCCC
Confidence            7655477777777774  4455543     23334333      222  3333 2221 1111 1256677788888876


Q ss_pred             c
Q 019139          343 N  343 (345)
Q Consensus       343 ~  343 (345)
                      +
T Consensus       148 i  148 (181)
T d1zh8a1         148 P  148 (181)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.11  E-value=1.4  Score=37.52  Aligned_cols=30  Identities=30%  Similarity=0.221  Sum_probs=27.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGID  226 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~  226 (345)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            58999998 9999999999999998 888885

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.11  E-value=0.59  Score=37.08  Aligned_cols=30  Identities=37%  Similarity=0.421  Sum_probs=27.1

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       198 VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      |+|+|+|+.|+.++..|..+|. +|++++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999999 88888764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.85  E-value=0.57  Score=39.34  Aligned_cols=32  Identities=41%  Similarity=0.585  Sum_probs=28.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP  229 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~  229 (345)
                      -|+|+|+|..|+.++..|...|+ +|+++++..
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            48899999999999999999999 899988643

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.69  E-value=0.68  Score=37.07  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=27.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPK  230 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~  230 (345)
                      .+|.|+|+|+.|+.|+..++..  |+ .|++++..+.
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            4799999999999999876554  67 8999887653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.62  E-value=1.8  Score=31.39  Aligned_cols=62  Identities=23%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             HHhhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCC
Q 019139          186 VWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK  247 (345)
Q Consensus       186 l~~~~~~~~g~~VlI~-Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~  247 (345)
                      +++..+++.-+.+++. ..-..-.+++++++.+|..++++...+.+..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4466777777766654 3345667888999999998899988888889999999999888764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.37  E-value=1.6  Score=31.51  Aligned_cols=37  Identities=19%  Similarity=0.398  Sum_probs=25.2

Q ss_pred             CCCEEEEEcCCh--HH------HH---HHHHHHHcCCCeEEEEcCChhH
Q 019139          194 PGSIVAVFGLGT--VG------LA---VAEGAKAAGASRVIGIDIDPKK  231 (345)
Q Consensus       194 ~g~~VlI~Gag~--vG------~~---a~q~a~~~G~~~vi~~~~~~~~  231 (345)
                      ...+|||+|+|+  +|      .+   ++..+|..|+ .++.+..+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeT   50 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPET   50 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTS
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhh
Confidence            346899999876  22      34   4445556799 78888777664

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.05  E-value=7.4  Score=28.69  Aligned_cols=102  Identities=17%  Similarity=0.110  Sum_probs=54.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCce-----------EeCCCCCCccHHHHHHhhcCC-
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-----------FVNPKDHDKPIQQVLVDLTDG-  263 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~-----------~i~~~~~~~~~~~~~~~~~~g-  263 (345)
                      ++|-++|.|.+|...+.-+...|. .++.-+..++..+.+++.+...           ++..-..+.........+... 
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~   79 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL   79 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence            468899999999887776666776 5554444444444444443321           111100011112222223333 


Q ss_pred             -CccEEEEccC-CHHHHHHHHHHhccCCeEEEEeccC
Q 019139          264 -GVDYSFECIG-NVSVMRAALECCHKGWGTSVIVGVA  298 (345)
Q Consensus       264 -g~d~v~d~~g-~~~~~~~~~~~l~~~~G~~v~~G~~  298 (345)
                       +-.+++|++. ++.....+.+.++..+.+++.+...
T Consensus        80 ~~~~~iid~sT~~p~~~~~~~~~~~~~gi~~ldapVs  116 (156)
T d2cvza2          80 REGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVS  116 (156)
T ss_dssp             CTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEE
T ss_pred             cccccccccccCCHHHHHHHHHHHHHcCCeEEecccc
Confidence             4457777655 4555566666665433778777664

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.01  E-value=0.65  Score=38.30  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=27.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      -|+|+|+|.+|+.++..+...|. +|+++++.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38899999999999888888999 89999864

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=81.98  E-value=0.27  Score=38.08  Aligned_cols=82  Identities=18%  Similarity=0.217  Sum_probs=49.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN  274 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~-G~~~vi~-~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~  274 (345)
                      +|.|+|+|.+|...+...+.. +. .+++ +++++++.      .........+    .    . .....+|+|+.+++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~----~----~-~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD----V----D-KHADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG----G----G-GTTTTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh----h----h-hhccccceEEEeCCC
Confidence            588999999998877777765 56 4554 44443321      1111211111    1    0 111368999988887


Q ss_pred             HHHHHHHHHHhccCCeEEEEe
Q 019139          275 VSVMRAALECCHKGWGTSVIV  295 (345)
Q Consensus       275 ~~~~~~~~~~l~~~~G~~v~~  295 (345)
                      ..-.+.+.++|..| ..++.+
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEECC
T ss_pred             cccHHHHHHHHHCC-CcEEEe
Confidence            65578888888886 666644

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.74  E-value=0.55  Score=37.76  Aligned_cols=98  Identities=17%  Similarity=0.217  Sum_probs=57.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----hcCCceEeCCCCCCccHHHHHHhhc----
Q 019139          192 VEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT----  261 (345)
Q Consensus       192 ~~~g~~VlI~Gag~vG~~a~q~a~~~--G~~~vi~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~----  261 (345)
                      .....+||-+|.+ .|..++.+|+++  +. ++++++.+++..+.++    ..|....+....  .+..+.+.++.    
T Consensus        54 ~~kpk~ILEiGt~-~G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~--Gd~~e~l~~l~~~~~  129 (214)
T d2cl5a1          54 EYSPSLVLELGAY-CGYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTILN--GASQDLIPQLKKKYD  129 (214)
T ss_dssp             HHCCSEEEEECCT-TSHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHGGGHHHHSC
T ss_pred             hhCCCEEEEEccC-chhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceeee--ccccccccchhhccc
Confidence            3445688889874 366777788776  44 8999999988777663    456543222222  23334333322    


Q ss_pred             CCCccEEE-EccCCHH----HHHHHHHHhccCCeEEEE
Q 019139          262 DGGVDYSF-ECIGNVS----VMRAALECCHKGWGTSVI  294 (345)
Q Consensus       262 ~gg~d~v~-d~~g~~~----~~~~~~~~l~~~~G~~v~  294 (345)
                      .+.+|++| |..-+..    .+...++.|++| |.++.
T Consensus       130 ~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         130 VDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             ccccceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence            23789777 4322211    133445568996 76553

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.22  E-value=0.58  Score=37.56  Aligned_cols=30  Identities=30%  Similarity=0.412  Sum_probs=27.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI  227 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~  227 (345)
                      -|+|+|+|+-|+.|+..|..+|. +|++++.
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            47889999999999999999999 8999874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=80.91  E-value=0.57  Score=38.73  Aligned_cols=60  Identities=18%  Similarity=0.344  Sum_probs=36.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCC-CccEEEEccC
Q 019139          197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG  273 (345)
Q Consensus       197 ~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~g-g~d~v~d~~g  273 (345)
                      +|||+|+ |-+|...+..+...|.  +++++.....      +    ..|..+     .+.+.+.... ++|+||.+++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~----~~Dl~~-----~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------F----CGDFSN-----PKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------S----CCCTTC-----HHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------c----cCcCCC-----HHHHHHHHHHcCCCEEEEecc
Confidence            5899998 9999998888777775  5555444321      1    112222     1233333333 7899999886

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.90  E-value=0.5  Score=37.83  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=28.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCCC------eEEEEcCChh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGAS------RVIGIDIDPK  230 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~~------~vi~~~~~~~  230 (345)
                      -+|+|+|+|+.|+.|+..+...|.+      +|.+.++.+.
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            3799999999999999888887731      6888887653

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=80.81  E-value=0.67  Score=39.30  Aligned_cols=33  Identities=39%  Similarity=0.509  Sum_probs=28.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       195 g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .--|+|+|+|..|+.++..|...|+ +|++++..
T Consensus        19 ~~DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          19 TTQVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             ccCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            3458899999999999999999999 89998764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=80.77  E-value=0.99  Score=37.81  Aligned_cols=32  Identities=22%  Similarity=0.265  Sum_probs=26.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID  228 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~~vi~~~~~  228 (345)
                      .+|||+|+ |-+|...+..+...|. .+++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCc
Confidence            47999998 9999999999998998 67666443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.58  E-value=2.4  Score=33.05  Aligned_cols=68  Identities=19%  Similarity=0.327  Sum_probs=41.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          196 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       196 ~~VlI~Ga-g~vG~~a~q~a~~~G~~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+|||+|+ |-+|...+..+...|.. .|++..+++..       ....+ ....  .++.+. .+......|.++.++|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~--~d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPV--GPLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCB--SCHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccc--cchhhh-hhccccchheeeeeee
Confidence            68999998 99999999998888862 45555443211       00111 1111  233332 3333347899999987


Q ss_pred             C
Q 019139          274 N  274 (345)
Q Consensus       274 ~  274 (345)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=80.22  E-value=3.2  Score=33.01  Aligned_cols=90  Identities=18%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             EEEEEcCChHHH-HHHHHHHHc-CCCeEE-EEcCChhHHH-HHHhcCCc--eEeCCCCCCccHHHHHHhhcCC-CccEEE
Q 019139          197 IVAVFGLGTVGL-AVAEGAKAA-GASRVI-GIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDG-GVDYSF  269 (345)
Q Consensus       197 ~VlI~Gag~vG~-~a~q~a~~~-G~~~vi-~~~~~~~~~~-~~~~~g~~--~~i~~~~~~~~~~~~~~~~~~g-g~d~v~  269 (345)
                      +|.|+|+|.+|. ..+...+.. +. +++ +++++.++.+ .++++|.+  .+..+.+    +    .++... .+|+|+
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~----~ell~~~~iD~V~  105 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----F----DKIAKDPKIDAVY  105 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----G----GGGGGCTTCCEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc----h----hhhcccccceeee
Confidence            778899998885 333443333 66 555 5677777644 44666653  2233332    2    122223 799999


Q ss_pred             EccCCHHHHHHHHHHhccCCeEEEEecc
Q 019139          270 ECIGNVSVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       270 d~~g~~~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                      -++....-.+.+..++..+  .=+++.-
T Consensus       106 I~tp~~~H~~~~~~al~~g--k~v~~EK  131 (221)
T d1h6da1         106 IILPNSLHAEFAIRAFKAG--KHVMCEK  131 (221)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECS
T ss_pred             eccchhhhhhHHHHhhhcc--hhhhcCC
Confidence            8888655577888888774  4455543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.17  E-value=0.8  Score=39.04  Aligned_cols=35  Identities=26%  Similarity=0.321  Sum_probs=27.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChh
Q 019139          196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPK  230 (345)
Q Consensus       196 ~~VlI~Gag~vG~~a~q~a~~~G~-~~vi~~~~~~~  230 (345)
                      .+|+|+|+|..|++++..++..|. .+|++.++++.
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            579999999999988876655542 28999988753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=80.09  E-value=6.3  Score=28.01  Aligned_cols=93  Identities=11%  Similarity=0.011  Sum_probs=60.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 019139          197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS  276 (345)
Q Consensus       197 ~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g~~~  276 (345)
                      .++|.|.|.+|...+..++  +. .|++++.++++.+.++..|...+. -+   ..-.+.+.+..-..++.++-+..+..
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd---~~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GD---PTRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SC---TTSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cc---cCCHHHHHHhhhhcCcEEEEeccchh
Confidence            4788899999998877764  44 678888999988888888765433 22   11234455543347888888877643


Q ss_pred             H---HHHHHHHhccCCeEEEEecc
Q 019139          277 V---MRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       277 ~---~~~~~~~l~~~~G~~v~~G~  297 (345)
                      .   +-...+.+.|. .+++..-.
T Consensus        75 ~n~~~~~~~r~~~~~-~~iia~~~   97 (129)
T d2fy8a1          75 ETIHCILGIRKIDES-VRIIAEAE   97 (129)
T ss_dssp             HHHHHHHHHHHHCSS-SCEEEECS
T ss_pred             hhHHHHHHHHHHCCC-ceEEEEEc
Confidence            2   23344556675 66665543

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.08  E-value=5  Score=34.78  Aligned_cols=94  Identities=14%  Similarity=0.119  Sum_probs=60.8

Q ss_pred             EcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHh----cCCceEeCC--------CCC----CccHHHHHHhhcCCC
Q 019139          201 FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNP--------KDH----DKPIQQVLVDLTDGG  264 (345)
Q Consensus       201 ~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~----~g~~~~i~~--------~~~----~~~~~~~~~~~~~gg  264 (345)
                      -+-++.|..++.+|+..|++.|++.|.+++..+.+++    .+.......        ...    ..+....+ ...+..
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~-~~~~~~  129 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM-AERHRY  129 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH-HHSTTC
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhh-HhhcCc
Confidence            3557789999999999999899999999999888864    122111100        000    01222222 223337


Q ss_pred             cc-EEEEccCCH-HHHHHHHHHhccCCeEEEEec
Q 019139          265 VD-YSFECIGNV-SVMRAALECCHKGWGTSVIVG  296 (345)
Q Consensus       265 ~d-~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~G  296 (345)
                      || +.+|..|++ .-++.++++++.+ |.+.+..
T Consensus       130 fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         130 FHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             EEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            99 456998874 3479999999997 8776654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.04  E-value=1.2  Score=34.85  Aligned_cols=86  Identities=16%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHhcCCceEeCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 019139          194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG  273 (345)
Q Consensus       194 ~g~~VlI~Gag~vG~~a~q~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~gg~d~v~d~~g  273 (345)
                      .+.+|.|+|.|.+|...+++++.+|+ +|++.++.....       .......    .++.+.+.     ..|++.-++.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~ell~-----~sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV----QHLSDLLN-----MSDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC----SCHHHHHH-----HCSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh----hhHHHHHh-----hccceeeccc
Confidence            57899999999999999999999999 899987653311       0111111    12333333     2576666544


Q ss_pred             -CH----HHHHHHHHHhccCCeEEEEecc
Q 019139          274 -NV----SVMRAALECCHKGWGTSVIVGV  297 (345)
Q Consensus       274 -~~----~~~~~~~~~l~~~~G~~v~~G~  297 (345)
                       .+    ..-...++.++++ ..+|-++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence             21    1125677788886 77777764