Citrus Sinensis ID: 019165

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MGEEEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAPPKPEEKKEEPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVKQEPEKKEEKCGGGDGGGGDGAANKEEKKGGGGGENKENKAAAGEQENQEKKEGDNKKSNDDEAKAAAADATAATEETTVVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
ccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHccccccccccEEEEEEcccHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccHHHEEccccccccccHHHHHHHHHHcccccEEEccccccccEEEEEEccHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccHHHHcccccccccccccccccccccccccccccccccccccc
cccccccccHHHHcccHHccccHHcccccccHccHHHccccHcccccccccccccccccccEEEEEEEEccHHHHHHHHHHHHcccccEEEEEEccccEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccHccccccccccccccccEEEEEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEEcHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcc
mgeeekkppaaeekkpeeakkeeaaekpqekpaaaeekkpapeeskdakaakeeqsppppkeIVLKVYMHCEGCARKVRRCLKgfegvedvitdckthkvivkgekadplkvLDRVQRKSHRqvellspipkptaaeeekkaeekappkpeekkeepQVIIVVLKVHMHCEGCSLEIKKRILRMegvesaepdlknsqvtvkgvfdppklvDYVYKRtgkhavivkqepekkeekcgggdggggdgaankeekkgggggenkenkaaageqenqekkegdnkksnDDEAKAAAADATAATEETTVVELKKNINeyyyypqryamemyayppqifsdenpnacsvm
mgeeekkppaaeekkpeeakkeeaaekpqekpaaaeekkpapeeskdakaakeeqsppppkeiVLKVYMHCEGCARKVRRCLKgfegvedvitdckthkvivkgekadplkvldrvqrkshrqvellspipkptaaeeekkaeekappkpeekkeepQVIIVVLKVHMHCEGCSLEIKKRILRMEGVesaepdlknsqvtvkgvfdppkLVDYVYKRTGKhavivkqepekkeekcgggdggggdgaankeekkgggggenkenkaaageqenqekkegdnkksnDDEAKAAAadataateettvVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
MGeeekkppaaeekkpeeakkeeaaekpqekpaaaeekkpapeeskdakaakeeQSPPPPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIpkptaaeeekkaeekappkpeekkeepQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVkqepekkeekcgggdggggdgaankeekkgggggenkenkaaageqenqekkegdnkkSNddeakaaaadataateettVVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
**************************************************************IVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKV**********************************************VIIVVLKVHMHCEGCSLEIKKRILRMEGV**********QVTVKGVFDPPKLVDYVYKRTGKHAVIV*****************************************************************************TTVVELKKNINEYYYYPQRYAMEMYAYPPQIF***********
**************************************************************IVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAPPKPEEKKEEPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGK********************************************************************************************NEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
**********************************************************PPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKP***********************PQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVKQ*****************DGAAN*****************************************************TTVVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
*********************************************************PPPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIP************************EPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVKQE**************************************************************************TTVVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
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MGEEEKKPPAAEEKKPEEAKKEEAAEKPQEKPAAAEEKKPAPEESKDAKAAKEEQSPPPPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAPPKPEEKKEEPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVKQEPEKKEEKCGGGDGGGGDGAANKEEKKGGGGGENKENKAAAGEQENQEKKEGDNKKSNDDEAKAAAADATAATEETTVVELKKNINEYYYYPQRYAMEMYAYPPQIFSDENPNACSVM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
Q9SZN7153 Heavy metal-associated is no no 0.272 0.614 0.381 4e-08
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1 Back     alignment and function desciption
 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 65  LKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQV 124
           +KV M CEGC RKVRR ++G +GV  V  + K HKV V G   DP KV+ R+  ++ ++V
Sbjct: 30  IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGY-VDPNKVVARMSHRTGKKV 88

Query: 125 ELLSPIPKPTAAEEEKKA--EEKAPPKPEEKKEEPQV 159
           EL   +P    A        ++KAP     + ++P V
Sbjct: 89  ELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRVDDPGV 125
Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
255540171349 metal ion binding protein, putative [Ric 0.881 0.871 0.650 4e-91
449454814333 PREDICTED: uncharacterized protein LOC10 0.910 0.942 0.637 2e-89
449440534314 PREDICTED: uncharacterized protein LOC10 0.907 0.996 0.560 1e-80
449528291358 PREDICTED: uncharacterized protein LOC10 0.942 0.907 0.513 2e-77
356527888310 PREDICTED: uncharacterized protein LOC10 0.762 0.848 0.621 3e-74
225456373311 PREDICTED: uncharacterized protein LOC10 0.753 0.836 0.671 5e-72
297795873284 hypothetical protein ARALYDRAFT_495136 [ 0.747 0.908 0.545 2e-70
145359095283 Heavy-metal-associated domain--containin 0.739 0.901 0.540 2e-70
62318564283 putative protein [Arabidopsis thaliana] 0.739 0.901 0.540 2e-70
186531069290 Heavy-metal-associated domain--containin 0.739 0.879 0.540 4e-70
>gi|255540171|ref|XP_002511150.1| metal ion binding protein, putative [Ricinus communis] gi|223550265|gb|EEF51752.1| metal ion binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 207/318 (65%), Positives = 245/318 (77%), Gaps = 14/318 (4%)

Query: 30  EKPAAAEEKK--PAPEESKDAKAAKEEQSPPPPKEIVLKVYMHCEGCARKVRRCLKGFEG 87
           +KP A EEKK    P+E+K++K    ++SPPPP+EI++KVYMHCEGCARKVRRCLKGF+G
Sbjct: 44  DKPPAGEEKKEDKKPDEAKESK----DESPPPPQEIIMKVYMHCEGCARKVRRCLKGFDG 99

Query: 88  VEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKPTAAEEEKKAEEKAP 147
           VEDVITDCK+ KV+VKGEKADPL+VL RVQRKSHRQVEL+SPIPKP + EE+K AEEK  
Sbjct: 100 VEDVITDCKSSKVVVKGEKADPLQVLARVQRKSHRQVELISPIPKPPSEEEKKAAEEKEK 159

Query: 148 PKPEEKKEEPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDP 207
           PKPEEKKEEP VIIVVLKV+MHCE C++EIKKRI RM+GVESA+PDLK+S+VTVKGVFDP
Sbjct: 160 PKPEEKKEEPPVIIVVLKVYMHCEACAMEIKKRIQRMKGVESADPDLKSSEVTVKGVFDP 219

Query: 208 PKLVDYVYKRTGKHAVIVKQEPEKKEEKCGGGDGGGGDGAANKEEKKGGGGGENKENKAA 267
            KLV+YV KRTGKHA+IVKQEP +K+ +         +               +KE K  
Sbjct: 220 QKLVEYVRKRTGKHALIVKQEPAEKKGEGEEKGKESKEEKKEAAAAGAPDQEGDKEKK-- 277

Query: 268 AGEQENQEKKEGDNKKSNDDEAKAAAADATAATEETTVVELKKNINEYYYYPQRYAMEMY 327
            GEQE+ ++K+      +  EAK   A     TEET V+ELKK  NEYYYYP RYAME+Y
Sbjct: 278 GGEQEDNKEKKEGGGGGDQGEAKPEEAQ----TEETKVIELKK--NEYYYYPPRYAMELY 331

Query: 328 AYPPQIFSDENPNACSVM 345
           AYPPQIFSDENPNACSVM
Sbjct: 332 AYPPQIFSDENPNACSVM 349

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449454814|ref|XP_004145149.1| PREDICTED: uncharacterized protein LOC101222573 [Cucumis sativus] gi|449471026|ref|XP_004153186.1| PREDICTED: uncharacterized protein LOC101218262 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449440534|ref|XP_004138039.1| PREDICTED: uncharacterized protein LOC101211886 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449528291|ref|XP_004171138.1| PREDICTED: uncharacterized protein LOC101226706 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356527888|ref|XP_003532538.1| PREDICTED: uncharacterized protein LOC100796289 [Glycine max] Back     alignment and taxonomy information
>gi|225456373|ref|XP_002284075.1| PREDICTED: uncharacterized protein LOC100249014 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297795873|ref|XP_002865821.1| hypothetical protein ARALYDRAFT_495136 [Arabidopsis lyrata subsp. lyrata] gi|297311656|gb|EFH42080.1| hypothetical protein ARALYDRAFT_495136 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|145359095|ref|NP_199887.2| Heavy-metal-associated domain--containing protein [Arabidopsis thaliana] gi|332008601|gb|AED95984.1| Heavy-metal-associated domain--containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|62318564|dbj|BAD94944.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|186531069|ref|NP_001119410.1| Heavy-metal-associated domain--containing protein [Arabidopsis thaliana] gi|332008603|gb|AED95986.1| Heavy-metal-associated domain--containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2167366355 FP3 "farnesylated protein 3" [ 0.214 0.208 0.891 3.3e-74
TAIR|locus:2163300290 AT5G50740 [Arabidopsis thalian 0.205 0.244 0.830 6e-71
TAIR|locus:2075497246 AT3G02960 "AT3G02960" [Arabido 0.2 0.280 0.579 4e-45
TAIR|locus:2153969319 AT5G24580 "AT5G24580" [Arabido 0.217 0.235 0.394 1.5e-35
TAIR|locus:2142614392 AT5G03380 [Arabidopsis thalian 0.194 0.170 0.485 2.5e-28
TAIR|locus:2057951386 AT2G36950 [Arabidopsis thalian 0.443 0.396 0.356 1.1e-26
TAIR|locus:2018768287 AT1G29000 [Arabidopsis thalian 0.466 0.560 0.283 2.5e-26
TAIR|locus:2046183245 AT2G28090 [Arabidopsis thalian 0.463 0.653 0.301 9.3e-20
TAIR|locus:2121199153 FP6 "farnesylated protein 6" [ 0.182 0.411 0.468 3e-14
TAIR|locus:2096204 577 AT3G05220 [Arabidopsis thalian 0.179 0.107 0.476 7.6e-14
TAIR|locus:2167366 FP3 "farnesylated protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 361 (132.1 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:    57 PPPPKEIVLKVYMHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRV 116
             PPPP+E+VLKVYMHCEGCARKVRRCLKGFEGVEDV+TDCKT KV+VKGEKADPLKVL RV
Sbjct:    69 PPPPQEVVLKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKTGKVVVKGEKADPLKVLARV 128

Query:   117 QRKSHRQVELLSPI 130
             QRK+HRQV+LLSPI
Sbjct:   129 QRKTHRQVQLLSPI 142
GO:0005634 "nucleus" evidence=ISM
GO:0030001 "metal ion transport" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA;ISS
GO:0046914 "transition metal ion binding" evidence=IDA
GO:0046916 "cellular transition metal ion homeostasis" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
TAIR|locus:2163300 AT5G50740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075497 AT3G02960 "AT3G02960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153969 AT5G24580 "AT5G24580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142614 AT5G03380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057951 AT2G36950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018768 AT1G29000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046183 AT2G28090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121199 FP6 "farnesylated protein 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096204 AT3G05220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00017967001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (299 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
cd0037163 cd00371, HMA, Heavy-metal-associated domain (HMA) 3e-09
cd0037163 cd00371, HMA, Heavy-metal-associated domain (HMA) 7e-09
pfam0040362 pfam00403, HMA, Heavy-metal-associated domain 2e-08
pfam0040362 pfam00403, HMA, Heavy-metal-associated domain 2e-06
TIGR00927 1096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 5e-05
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 1e-04
PTZ00144418 PTZ00144, PTZ00144, dihydrolipoamide succinyltrans 4e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 9e-04
PTZ00144418 PTZ00144, PTZ00144, dihydrolipoamide succinyltrans 0.002
>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information 
 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 69  MHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVE 125
           M C GC  K+ + L+   GVE V  D +T K  V+ +     + L      +  +  
Sbjct: 7   MTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGYKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63
>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain Back     alignment and domain information
>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|240289 PTZ00144, PTZ00144, dihydrolipoamide succinyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
PRK10671 834 copA copper exporting ATPase; Provisional 99.3
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 99.25
PF0040362 HMA: Heavy-metal-associated domain; InterPro: IPR0 99.16
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 99.16
PF0040362 HMA: Heavy-metal-associated domain; InterPro: IPR0 98.96
COG260871 CopZ Copper chaperone [Inorganic ion transport and 98.92
KOG160373 consensus Copper chaperone [Inorganic ion transpor 98.85
COG260871 CopZ Copper chaperone [Inorganic ion transport and 98.82
KOG160373 consensus Copper chaperone [Inorganic ion transpor 98.59
KOG4656247 consensus Copper chaperone for superoxide dismutas 98.43
KOG4656247 consensus Copper chaperone for superoxide dismutas 98.3
PLN02957238 copper, zinc superoxide dismutase 97.82
PRK10671 834 copA copper exporting ATPase; Provisional 97.6
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 97.48
PLN02957238 copper, zinc superoxide dismutase 97.21
TIGR0000368 copper ion binding protein. This model describes a 97.2
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 96.96
TIGR0000368 copper ion binding protein. This model describes a 96.46
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 95.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 93.53
TIGR0205292 MerP mercuric transport protein periplasmic compon 87.66
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information 
Probab=99.30  E-value=2.9e-11  Score=130.82  Aligned_cols=158  Identities=20%  Similarity=0.303  Sum_probs=112.1

Q ss_pred             cEEEEEEe-eechhHHHHHHHHHhCCCCcceeeecccCceEEeeccCCChHHHHHhhhccccccccccCCCCCCCchhhh
Q 019165           61 KEIVLKVY-MHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGEKADPLKVLDRVQRKSHRQVELLSPIPKPTAAEEE  139 (345)
Q Consensus        61 ~~v~l~V~-M~C~~Ca~kIe~~L~~l~GV~~v~vdl~~~kv~V~~~~~d~~~I~~~I~~~~G~~a~l~s~~p~~~~~~~~  139 (345)
                      .+++|.|. |+|++|+.+|+++|.+++||.++.+++.  +.++.... +...|...|++ +||.+.+.++...+......
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~-~~~~i~~~i~~-~Gy~~~~~~~~~~~~~~~~~   78 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTA-SAEALIETIKQ-AGYDASVSHPKAKPLTESSI   78 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecC-CHHHHHHHHHh-cCCccccccccccccccccc
Confidence            46899999 9999999999999999999999999995  44454444 78899999985 79998865422111000000


Q ss_pred             h-hhccCCCCCCccCCCCCceEEEEEEe-cccCcccHHHHHHHHhccCCeeeEeecCCCCeEEEeecCChHHHHHHHHHh
Q 019165          140 K-KAEEKAPPKPEEKKEEPQVIIVVLKV-HMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKR  217 (345)
Q Consensus       140 ~-~~~~~~~~~~~~~~~~~~~~~v~l~V-gM~C~~Ca~kIek~L~kl~GV~~v~vdl~~~~v~V~~~~~~~~L~~~I~kk  217 (345)
                      . ............. ......++.|.| ||+|.+|+..|++.|..++||.++.+++.++++.|.+..+...+...+. .
T Consensus        79 ~~~~~~~~~~~~~~~-~~~~~~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~-~  156 (834)
T PRK10671         79 PSEALTAASEELPAA-TADDDDSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVE-K  156 (834)
T ss_pred             Cchhhhhhhhhcccc-ccCcCceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHH-h
Confidence            0 0000000000000 001123577889 9999999999999999999999999999999888875567788888885 7


Q ss_pred             cCCceEE
Q 019165          218 TGKHAVI  224 (345)
Q Consensus       218 ~G~~a~i  224 (345)
                      +||.+.+
T Consensus       157 ~Gy~a~~  163 (834)
T PRK10671        157 AGYGAEA  163 (834)
T ss_pred             cCCCccc
Confidence            9997653

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures Back     alignment and domain information
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02957 copper, zinc superoxide dismutase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02957 copper, zinc superoxide dismutase Back     alignment and domain information
>TIGR00003 copper ion binding protein Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00003 copper ion binding protein Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>TIGR02052 MerP mercuric transport protein periplasmic component Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 2e-15
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 1e-14
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 1e-13
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 5e-13
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 1e-12
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 9e-11
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 2e-10
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 7e-10
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 6e-09
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 1e-08
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 1e-08
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 6e-08
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 5e-08
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 6e-05
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 6e-05
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 9e-05
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 2e-04
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 3e-04
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 2e-04
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 3e-04
2l3m_A71 Copper-ION-binding protein; structural genomics, c 5e-04
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 6e-04
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 8e-04
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 Back     alignment and structure
 Score = 69.9 bits (171), Expect = 2e-15
 Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 1/90 (1%)

Query: 145 KAPPKPEEKKEEPQVIIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGV 204
            +     +   +  +  +   V M C+ C   ++K +  + GV+  E  L++  V V   
Sbjct: 4   GSSGMASDSGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT 63

Query: 205 FDPPKLVDYVYKRTGKHAVIVKQEPEKKEE 234
               ++   + + TG+ AV+      + + 
Sbjct: 64  LPSQEVQALL-EGTGRQAVLKGMGSGQLQN 92
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222 Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249 Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68 Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73 Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85 Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75 Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79 Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 99.78
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 99.74
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 99.7
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 99.3
4a4j_A69 Pacszia, cation-transporting ATPase PACS; hydrolas 99.19
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 99.16
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 99.12
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 99.09
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 99.09
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 99.0
4a4j_A69 Pacszia, cation-transporting ATPase PACS; hydrolas 98.98
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 98.96
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 98.96
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 98.96
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 98.95
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 98.93
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 98.9
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 98.9
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 98.89
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 98.89
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 98.88
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 98.87
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 98.87
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 98.87
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 98.86
2l3m_A71 Copper-ION-binding protein; structural genomics, c 98.85
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 98.84
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 98.84
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 98.83
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 98.82
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 98.8
2kyz_A67 Heavy metal binding protein; structural genomics, 98.8
1yg0_A66 COP associated protein; open-faced beta-sandwich, 98.8
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 98.79
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 98.78
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 98.77
1opz_A76 Potential copper-transporting ATPase; mutation, fo 98.77
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 98.75
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 98.74
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 98.74
2kkh_A95 Putative heavy metal transporter; zinc transport, 98.74
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 98.69
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 98.69
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 98.68
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 98.67
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 98.65
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 98.65
2l3m_A71 Copper-ION-binding protein; structural genomics, c 98.64
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 98.64
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 98.63
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 98.62
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 98.62
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 98.6
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 98.58
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 98.57
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 98.56
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 98.55
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 98.55
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 98.55
1opz_A76 Potential copper-transporting ATPase; mutation, fo 98.55
2kyz_A67 Heavy metal binding protein; structural genomics, 98.53
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 98.53
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 98.52
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 98.51
1yg0_A66 COP associated protein; open-faced beta-sandwich, 98.5
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 98.46
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 98.45
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 98.43
2kkh_A95 Putative heavy metal transporter; zinc transport, 98.39
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 98.36
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 98.33
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 98.29
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 98.2
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 98.17
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 97.85
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 97.59
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
Probab=99.78  E-value=3.2e-18  Score=143.76  Aligned_cols=140  Identities=22%  Similarity=0.378  Sum_probs=115.7

Q ss_pred             CCcEEEEEEe-eechhHHHHHHHHHhCCCCcceeeecccCceEEeecc--CCChHHHHHhhhccccccccccCCCCCCCc
Q 019165           59 PPKEIVLKVY-MHCEGCARKVRRCLKGFEGVEDVITDCKTHKVIVKGE--KADPLKVLDRVQRKSHRQVELLSPIPKPTA  135 (345)
Q Consensus        59 ~~~~v~l~V~-M~C~~Ca~kIe~~L~~l~GV~~v~vdl~~~kv~V~~~--~~d~~~I~~~I~~~~G~~a~l~s~~p~~~~  135 (345)
                      +|.++.|.|. |+|.+|+..|++.|..++||.++.+++.++++.|..+  .++...|...|.. +||.+.++....    
T Consensus         2 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~~~~~----   76 (149)
T 2ew9_A            2 APQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQD-LGFEAAVMEDYA----   76 (149)
T ss_dssp             CCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHH-HTCEEEECSCSC----
T ss_pred             CcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhc-CCCceEeecccc----
Confidence            3678899999 9999999999999999999999999999999887542  2366788888885 699775432100    


Q ss_pred             hhhhhhhccCCCCCCccCCCCCceEEEEEEe-cccCcccHHHHHHHHhccCCeeeEeecCCCCeEEEeec---CChHHHH
Q 019165          136 AEEEKKAEEKAPPKPEEKKEEPQVIIVVLKV-HMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGV---FDPPKLV  211 (345)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~V-gM~C~~Ca~kIek~L~kl~GV~~v~vdl~~~~v~V~~~---~~~~~L~  211 (345)
                                           ....++.|.| ||+|.+|++.|++.|.+++||.++.+|+.+++++|...   ++.+.|+
T Consensus        77 ---------------------~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~  135 (149)
T 2ew9_A           77 ---------------------GSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDII  135 (149)
T ss_dssp             ---------------------CSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHH
T ss_pred             ---------------------cccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHH
Confidence                                 0123578999 99999999999999999999999999999999999743   5788999


Q ss_pred             HHHHHhcCCceEEe
Q 019165          212 DYVYKRTGKHAVIV  225 (345)
Q Consensus       212 ~~I~kk~G~~a~iv  225 (345)
                      ..|. .+||.+.++
T Consensus       136 ~~i~-~~Gy~~~~~  148 (149)
T 2ew9_A          136 KIIE-EIGFHASLA  148 (149)
T ss_dssp             HHHH-HHTCEEECC
T ss_pred             HHHH-hCCCceEec
Confidence            9995 799987653
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Back     alignment and structure
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Back     alignment and structure
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 Back     alignment and structure
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 345
d1qupa272 d.58.17.1 (A:2-73) Copper chaperone for superoxide 2e-11
d1qupa272 d.58.17.1 (A:2-73) Copper chaperone for superoxide 1e-09
d1fe0a_66 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 7e-08
d1fe0a_66 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 2e-07
d1cc8a_72 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 2e-07
d1cc8a_72 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 2e-06
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 4e-07
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 3e-05
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 7e-07
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 2e-05
d2ggpb172 d.58.17.1 (B:1-72) Copper transporter domain ccc2a 7e-07
d2ggpb172 d.58.17.1 (B:1-72) Copper transporter domain ccc2a 1e-05
d1osda_72 d.58.17.1 (A:) Mercuric ion binding protein MerP { 1e-06
d1osda_72 d.58.17.1 (A:) Mercuric ion binding protein MerP { 8e-06
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 2e-06
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 4e-05
d1mwza_73 d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, 2e-06
d1mwza_73 d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, 6e-04
d1sb6a_64 d.58.17.1 (A:) Copper chaperone {Synechocystis sp. 5e-06
d1sb6a_64 d.58.17.1 (A:) Copper chaperone {Synechocystis sp. 1e-05
d2qifa169 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt 2e-05
d2qifa169 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt 3e-04
d1cpza_68 d.58.17.1 (A:) Copper chaperone {Enterococcus hira 7e-05
d1cpza_68 d.58.17.1 (A:) Copper chaperone {Enterococcus hira 1e-04
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 1e-04
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 0.002
d1q8la_84 d.58.17.1 (A:) Menkes copper-transporting ATPase { 0.002
d1q8la_84 d.58.17.1 (A:) Menkes copper-transporting ATPase { 0.004
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.7 bits (137), Expect = 2e-11
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 162 VVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKH 221
               + MHCE C  +IK  +  + G+ S   D++   ++V+    P  +++ + +  GK 
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL-RNCGKD 66

Query: 222 AVI 224
           A+I
Sbjct: 67  AII 69
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1qupa272 Copper chaperone for superoxide dismutase, N-termi 99.43
d1fe0a_66 ATX1 metallochaperone protein (ATOX1) {Human (Homo 99.42
d1cc8a_72 ATX1 metallochaperone protein (ATOX1) {Baker's yea 99.41
d2ggpb172 Copper transporter domain ccc2a {Baker's yeast (Sa 99.39
d1sb6a_64 Copper chaperone {Synechocystis sp. pcc 6803, Scat 99.34
d1cpza_68 Copper chaperone {Enterococcus hirae [TaxId: 1354] 99.33
d1osda_72 Mercuric ion binding protein MerP {Ralstonia metal 99.32
d1cc8a_72 ATX1 metallochaperone protein (ATOX1) {Baker's yea 99.31
d2aw0a_72 Menkes copper-transporting ATPase {Human (Homo sap 99.3
d1q8la_84 Menkes copper-transporting ATPase {Human (Homo sap 99.29
d1fe0a_66 ATX1 metallochaperone protein (ATOX1) {Human (Homo 99.29
d1qupa272 Copper chaperone for superoxide dismutase, N-termi 99.28
d2qifa169 Copper chaperone {Bacillus subtilis, CopZ [TaxId: 99.27
d1kvja_79 Menkes copper-transporting ATPase {Human (Homo sap 99.27
d1p6ta279 Potential copper-translocating P-type ATPase CopA 99.27
d1p6ta172 Potential copper-translocating P-type ATPase CopA 99.23
d1mwza_73 Metal ion-transporting ATPase ZntA, N-terminal dom 99.19
d2ggpb172 Copper transporter domain ccc2a {Baker's yeast (Sa 99.17
d1kvja_79 Menkes copper-transporting ATPase {Human (Homo sap 99.17
d2qifa169 Copper chaperone {Bacillus subtilis, CopZ [TaxId: 99.16
d2aw0a_72 Menkes copper-transporting ATPase {Human (Homo sap 99.15
d1sb6a_64 Copper chaperone {Synechocystis sp. pcc 6803, Scat 99.14
d1cpza_68 Copper chaperone {Enterococcus hirae [TaxId: 1354] 99.13
d1osda_72 Mercuric ion binding protein MerP {Ralstonia metal 99.1
d1q8la_84 Menkes copper-transporting ATPase {Human (Homo sap 99.07
d1p6ta172 Potential copper-translocating P-type ATPase CopA 99.07
d1mwza_73 Metal ion-transporting ATPase ZntA, N-terminal dom 99.06
d1p6ta279 Potential copper-translocating P-type ATPase CopA 99.05
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=2.4e-13  Score=100.57  Aligned_cols=66  Identities=24%  Similarity=0.481  Sum_probs=61.9

Q ss_pred             EEEEEEecccCcccHHHHHHHHhccCCeeeEeecCCCCeEEEeecCChHHHHHHHHHhcCCceEEee
Q 019165          160 IIVVLKVHMHCEGCSLEIKKRILRMEGVESAEPDLKNSQVTVKGVFDPPKLVDYVYKRTGKHAVIVK  226 (345)
Q Consensus       160 ~~v~l~VgM~C~~Ca~kIek~L~kl~GV~~v~vdl~~~~v~V~~~~~~~~L~~~I~kk~G~~a~iv~  226 (345)
                      ..+.|.|+|+|.+|+++|+++|.+++||.++.||+.+++++|.+.++++.|+..|+ ++||+|.+..
T Consensus         6 ~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~-~~G~~A~l~g   71 (72)
T d1qupa2           6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRG   71 (72)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEEC
T ss_pred             EEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHH-HhCCCEEEec
Confidence            45789999999999999999999999999999999999999999999999999995 8999998763
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Back     information, alignment and structure
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure