Citrus Sinensis ID: 019196

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
Protein Sequence
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Secondary Structure (PSIPRED)
cEEEEEccccccccEEccccccccccccccccccccccEEEEEEEEEcccHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEEcccccHHHHHHcccccccccccHHHHHcccHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHccccEEEccccccHHHHHHHHHcccccccccEEEcccccccHHHHHHccccccEEEEEEEcccccccccHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccEEEcccccccEEEcccccccccccccEEEEEEEEccccHHHHHHccccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHccEEEEEccccccHHcHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccEEEEEEEEcccHcccccc
Coil and Loop (DISEMBL)
mealvcrklgdptvsihdekspivlsktepipqlnsstaVRVRVKATSLNYANYLQILGkyqekpplpfvpgsdysgtvdavgpnvsnfkvgdtvCGFAALGSFAQfivadqfpvpkgcdLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLgvdhvvdlsnesvIPSVKEFLKARKlkgvdvlydpvggklTKESLKLLNWGAQILVIGFasgeipvipanIALVKNWTVhglywgsykihrphVLEDSLRELLLWAAKGLITIHishtyspseanlafsaiEDRKVIGKVMIAFddmksirprl
Flexible Loop (DISEMBL)
mealvcrklgdptvsihdekspivlsktepipqlnsstaVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLkarklkgvdvlydpvGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIafddmksirprl
Low Complexity Region (SEG)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQvllvlgaaggvgvaavQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Disordered region (IsUnstruct)
*************************************TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD*********
Disordered Region (DISOPRED)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF**********
Disordered Region (DISEMBL)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Disordered Region (DISPRO)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	344	2.2.26 [Sep-21-2011]
A7RK30	365	Quinone oxidoreductase-li	N/A	no	0.918	0.865	0.382	7e-50
B0BNC9	350	Quinone oxidoreductase-li	yes	no	0.947	0.931	0.358	1e-45
Q3UNZ8	350	Quinone oxidoreductase-li	yes	no	0.901	0.885	0.360	7e-45
A6QQF5	349	Quinone oxidoreductase-li	yes	no	0.901	0.888	0.357	4e-43
Q8JFV8	484	Synaptic vesicle membrane	yes	no	0.860	0.611	0.284	1e-26
Q6AYT0	329	Quinone oxidoreductase OS	no	no	0.683	0.714	0.336	3e-26
P47199	331	Quinone oxidoreductase OS	no	no	0.700	0.728	0.326	7e-26
Q5R4S7	329	Quinone oxidoreductase OS	yes	no	0.651	0.680	0.319	5e-25
Q08257	329	Quinone oxidoreductase OS	yes	no	0.651	0.680	0.319	2e-24
Q99536	393	Synaptic vesicle membrane	no	no	0.831	0.727	0.283	2e-23

>sp|A7RK30|QORL2_NEMVE Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1

 Score =  197 bits (502), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 193/337 (57%), Gaps = 21/337 (6%)

Query: 2   EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY 61
            A++C +LG P V + D+ S      TE +     ++ VRV V +  +N+A+ L+ +GKY
Sbjct: 40  RAVMCNELGKPLV-VEDKFS------TENL----GTSQVRVAVHSCGINFADILKCIGKY 88

Query: 62  QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS-FAQFIVADQ---FPVPK 117
           QEKP LPFVPG++ SG V  VG  V++   GD V G    G   A+  V  Q   + +P 
Sbjct: 89  QEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPS 148

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIA 176
                 AAAL +++GT+++ L H+A L  GQ +LV  AAG +G+A+V +   V GA +I 
Sbjct: 149 SLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIG 208

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
            +R  EK+  ++ +G    +D + E++   VKE        G +V+ + VGG + K+ LK
Sbjct: 209 ASR-KEKLVIVQEIGATATIDYTRENIKDKVKELTDGH---GANVIMEAVGGDVFKQCLK 264

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
            + W   I+ +GFASGEIP IPANI LVKN +  GLYWG++  H P +L +S+ + L + 
Sbjct: 265 CIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYF 324

Query: 297 AKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             G L   +IS ++   + N AF  I  RK  GKV+I
Sbjct: 325 KNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVI 361

Nematostella vectensis (taxid: 45351)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|B0BNC9|QORL2_RAT Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1

 Score =  184 bits (466), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 183/343 (53%), Gaps = 17/343 (4%)

Query: 3   ALVCRKLGDPTVSIH-------DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL 55
           A +CR+ G    S H       + K P+ + +  P P       VRV V    +N+A+ L
Sbjct: 13  AWLCRQAGQGQ-SRHYRAAVCTELKQPLTIQEVAPRP--IGPQEVRVDVHFCGINFADNL 69

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ--- 112
              G+YQEKPPLPF PG ++SG V   G +VS  K GD V G +   S A+  + DQ   
Sbjct: 70  VCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTL 129

Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCG 171
           + +P+   L  AA LPV++GT+ +A+ HRA++  G+ +LV  AAG  G+A + +   V  
Sbjct: 130 WRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFC 189

Query: 172 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
           A +IA A   EK K     G    V+ S  S+  +VK+ + +    GV+V  D VGG + 
Sbjct: 190 AKVIAAAGSDEKCKLAMQRGAQSGVNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVF 246

Query: 232 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE 291
            +SL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+  
Sbjct: 247 LDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMST 306

Query: 292 LLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
            L +  +GLI  H    +   + N AF  +  RK  GKV+++ 
Sbjct: 307 ALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLSL 349

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q3UNZ8|QORL2_MOUSE Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1

 Score =  181 bits (459), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 9/319 (2%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct: 36  KQPLTIQEVAPRP--VGPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAV 93

Query: 80  DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV 136
              G +VS  K GD V G ++  + A+  + DQ   + +P+   L  AA LPV++GT+ +
Sbjct: 94  LETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query: 137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 195
           A+ HRA++  G+ +LV  AAG  G+A + +   V  A +IA     EK K     G    
Sbjct: 154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFS 213

Query: 196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
           V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I 
Sbjct: 214 VNYSQGSLRDAVKKLAGS---GGVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIA 270

Query: 256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
            +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N
Sbjct: 271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKIN 330

Query: 316 LAFSAIEDRKVIGKVMIAF 334
            AF  +  RK  GKV+++ 
Sbjct: 331 DAFLHVMQRKSTGKVLLSL 349

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/319 (35%), Positives = 168/319 (52%), Gaps = 9/319 (2%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+V+ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V
Sbjct: 35  KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMV 92

Query: 80  DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV 136
              G +VS  K GD V G       A+  + D    + +P+   L  AAALPV++GT+  
Sbjct: 93  LETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIF 152

Query: 137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 195
           AL HRA    G+ +LV  AAG  G+A + +   +  A +IA A   EK +     G    
Sbjct: 153 ALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSS 212

Query: 196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
           V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I 
Sbjct: 213 VNYSRGSLKEAVGKLVGS---GGVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIA 269

Query: 256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
            +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N
Sbjct: 270 SVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVN 329

Query: 316 LAFSAIEDRKVIGKVMIAF 334
            AF  +  RK  GKV+++ 
Sbjct: 330 DAFLHVTQRKSTGKVLLSL 348

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 24/320 (7%)

Query: 37  STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC 96
           S  V VRVK   LN+A+ +   G Y   P  P  PG + SG ++AVG  V++ KVGD V 
Sbjct: 98  SGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVL 157

Query: 97  GFAALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 153
                G + + +V      F +P+G     AAALPV + T+++ L     L   Q +LV 
Sbjct: 158 VLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVH 217

Query: 154 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 213
            AAGGVG+AA Q+ K      +     A K + +   GV H +D      +  V++    
Sbjct: 218 MAAGGVGIAATQLCKTVNDVTVFGTASASKHEVISQGGVTHPIDYRTRDYVEEVRKI--- 274

Query: 214 RKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFASGEIPVIPA------- 259
              KG+D++ DP+GG        L K   KL+++GA  ++ G       V          
Sbjct: 275 -SPKGLDIVLDPLGGSDTHKGYNLLKPMGKLISYGAANMLAGQKKNLFAVAKTWYQQFSV 333

Query: 260 -NIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA 317
             ++L++ N +V G + G Y      +++ ++  ++    +G +   I  TY   +   A
Sbjct: 334 HTLSLIQGNRSVCGFHLG-YLDSETELIDQAMTAVMDLYRQGKVKPRIDSTYHLEQVGDA 392

Query: 318 FSAIEDRKVIGKVMIAFDDM 337
              +++R  IGK+++  + M
Sbjct: 393 MRRMQERNNIGKIILTTEPM 412

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1

 Score =  119 bits (299), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 130/247 (52%), Gaps = 12/247 (4%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS F
Sbjct: 31  PAPQ---SHQVLIKVHACGVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGVSAF 87

Query: 90  KVGDTVCGFAAL-GSFAQF-IVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
           K GD V  F+ + G +A+F + AD   +P+P+  D    AAL + + T+  AL H A+  
Sbjct: 88  KKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARAR 147

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G+ +LV GA+GGVG+A  QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYID 207

Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 265
            +K    +   KGVDV+ + +  K     LKLL+ G +++V+G   G I + P +  + K
Sbjct: 208 KIK---TSAGDKGVDVIIEMLANKNLSNDLKLLSCGGRVIVVG-CRGSIEINPRD-TMAK 262

Query: 266 NWTVHGL 272
             ++ G+
Sbjct: 263 ETSIIGV 269

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1

 Score =  118 bits (295), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 10/251 (3%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P+PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS F
Sbjct: 31  PVPQ---SHQVLIKVHACGVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKVSAF 87

Query: 90  KVGDTV-CGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
           K GD V C     G +A+F +A     +P+P+  +    AAL + + T+  AL H A+  
Sbjct: 88  KKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARAR 147

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G+ +LV GA+GGVG+A  QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYID 207

Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 265
            +K  +   K KGVDV+ + +  +     LKLL+ G +++V+G   G I + P +  + K
Sbjct: 208 KIKMSV-GDKDKGVDVIIEMLANENLSNDLKLLSHGGRVVVVG-CRGPIEINPRD-TMAK 264

Query: 266 NWTVHGLYWGS 276
             ++ G+   S
Sbjct: 265 ETSIIGVSLSS 275

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  115 bits (288), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 128/235 (54%), Gaps = 11/235 (4%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ + +    ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 31  PIPKDHQAL---IKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGGNASAF 87

Query: 90  KVGDTVCGFAAL-GSFAQF-IVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
           K GD V   + + G +A++ + AD   + +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 88  KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVK 147

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G+ +LV GA+GGVG+AA QI +  G  ++  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNYID 207

Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
            +K+++     KG+DV+ + +      + L LL+ G Q++V+G + G I + P +
Sbjct: 208 KIKKYVGE---KGIDVIIEMLANVNLNKDLSLLSHGGQVIVVG-SRGTIEINPRD 258

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 128/235 (54%), Gaps = 11/235 (4%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ +    V ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 31  PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 87

Query: 90  KVGDTVCGFAAL-GSFAQF-IVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
           K GD V   + + G +A++ + AD   + +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 88  KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 147

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G+ +LV GA+GGVG+AA QI +  G  I+  A   E  K +   G   V +    + I 
Sbjct: 148 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYID 207

Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
            +K+++     KG+D++ + +      + L LL+ G +++V+G + G I + P +
Sbjct: 208 KIKKYVGE---KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTIEINPRD 258

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q99536|VAT1_HUMAN Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 24/310 (7%)

Query: 42  VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101
           +R++A  LN+A+ +   G Y   PPLP  PG + +G V AVG  VS+ K GD V      
Sbjct: 81  LRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRS 140

Query: 102 GSFAQFIVA---DQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 158
           G + + +       F +P+      AAAL V + T+++ L     L  G  +LV  AAGG
Sbjct: 141 GMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGG 200

Query: 159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG 218
           VG+AAVQ+ +      +     A K + LK  GV H +D      +  +K+       KG
Sbjct: 201 VGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKI----SPKG 256

Query: 219 VDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNW----------- 267
           VD++ DP+GG  T +   LL    +++  G A+         +AL + W           
Sbjct: 257 VDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQL 316

Query: 268 -----TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 322
                 V G + G Y      ++   +  LL    +G I  HI   +   +   A   ++
Sbjct: 317 LQANRAVCGFHLG-YLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQ 375

Query: 323 DRKVIGKVMI 332
           ++K +GKV++
Sbjct: 376 EKKNVGKVLL 385

Possesses ATPase activity (By similarity). Plays a part in calcium-regulated keratinocyte activation in epidermal repair mechanisms. Has no effect on cell proliferation. Negatively regulates mitochondrial fusion in cooperation with mitofusin proteins (MFN1-2).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
224127957	352	predicted protein [Populus trichocarpa]	1.0	0.977	0.812	1e-161
255559759	344	quinone oxidoreductase, putative [Ricinu	0.991	0.991	0.798	1e-151
356509112	346	PREDICTED: quinone oxidoreductase-like p	0.997	0.991	0.809	1e-145
15228926	348	GroES-like zinc-binding alcohol dehydrog	1.0	0.988	0.778	1e-145
388516337	346	unknown [Lotus japonicus]	0.997	0.991	0.769	1e-145
297820406	348	oxidoreductase [Arabidopsis lyrata subsp	1.0	0.988	0.772	1e-145
356516200	347	PREDICTED: quinone oxidoreductase-like p	0.997	0.988	0.795	1e-142
225448349	345	PREDICTED: quinone oxidoreductase-like p	0.994	0.991	0.792	1e-141
449447499	347	PREDICTED: quinone oxidoreductase-like p	0.997	0.988	0.75	1e-140
242077252	346	hypothetical protein SORBIDRAFT_06g02915	0.965	0.959	0.717	1e-134

>gi|224127957|ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|118487115|gb|ABK95387.1| unknown [Populus trichocarpa] gi|222871000|gb|EEF08131.1| predicted protein [Populus trichocarpa]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/352 (81%), Positives = 312/352 (88%), Gaps = 8/352 (2%)

Query: 1   MEALVCRKLGDPT-----VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL 55
           MEALVC+KLGDPT     +S  D  SPI+LSKT PIPQL S T+VRVRVKATSLNYANYL
Sbjct: 1   MEALVCKKLGDPTALKSSISEADNDSPIILSKTHPIPQLKSPTSVRVRVKATSLNYANYL 60

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ--- 112
           QILGKYQEKPPLPF+PGSDYSG VDAVG  VS  KVGD VC FAALGSFA+FIVADQ   
Sbjct: 61  QILGKYQEKPPLPFIPGSDYSGIVDAVGSGVSLLKVGDRVCSFAALGSFAEFIVADQAEL 120

Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
           F VP GCDL+AA ALPVAFGTSHVALVHRAQL+SGQVLLVLGAAGGVG++AVQIGKVCGA
Sbjct: 121 FKVPDGCDLVAAGALPVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLSAVQIGKVCGA 180

Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
            +IAVARG EK++FLKSLGVDHVVD S ESVI SVK+FLKARKLKGVDVLYDPVGGKLTK
Sbjct: 181 VVIAVARGDEKVQFLKSLGVDHVVDSSKESVIASVKDFLKARKLKGVDVLYDPVGGKLTK 240

Query: 233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 292
           ES+KLLNWGAQILVIGFASG++PVIPANIALVKNWTVHGLYWGSYKIHRP VLEDS+REL
Sbjct: 241 ESMKLLNWGAQILVIGFASGDVPVIPANIALVKNWTVHGLYWGSYKIHRPVVLEDSIREL 300

Query: 293 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           L W AKG ITIHISHTY+ SEA+LAF+AI+DRK IGKVMI  DD +S++ +L
Sbjct: 301 LSWVAKGRITIHISHTYNLSEASLAFAAIKDRKAIGKVMITIDDERSVKSKL 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559759|ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus communis] gi|223540030|gb|EEF41608.1| quinone oxidoreductase, putative [Ricinus communis]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 277/347 (79%), Positives = 306/347 (88%), Gaps = 6/347 (1%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVC++LGDP   +     PI ++K  PIPQL+S TAVRVRVKATSLNYANYLQILGK
Sbjct: 1   MEALVCKRLGDP---VEQNSPPIEITKNHPIPQLDSPTAVRVRVKATSLNYANYLQILGK 57

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           YQEKPPLPF+PGSDYSG VDAV PNVS FKVGD VC FA+LGSFAQFIVADQ   +PVP+
Sbjct: 58  YQEKPPLPFIPGSDYSGIVDAVAPNVSAFKVGDRVCSFASLGSFAQFIVADQSQLYPVPE 117

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           GCDL+AAAALPVAFGTSHVALVHRA L+S QVLLVLGAAGGVG++AVQIGKVCGA I+AV
Sbjct: 118 GCDLVAAAALPVAFGTSHVALVHRAHLTSSQVLLVLGAAGGVGLSAVQIGKVCGAIIVAV 177

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
            RG EK++ LKSLGVDHVVD S E+VI SVK+FL ++KLKGVDVLYDPVGGKLTK+SLKL
Sbjct: 178 VRGFEKVELLKSLGVDHVVDSSKENVIASVKDFLLSKKLKGVDVLYDPVGGKLTKDSLKL 237

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           LNWGAQILVIGFASGEIPVIPANIALVKNWT+HGLYWGSY+IHRP VLEDSLRELL W A
Sbjct: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTIHGLYWGSYRIHRPGVLEDSLRELLSWMA 297

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           KG ITIHISHTYS +EA+LAFSAI DRK IGKVMIAFD  +S+  +L
Sbjct: 298 KGQITIHISHTYSLAEASLAFSAIRDRKAIGKVMIAFDGGRSMTSKL 344

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509112|ref|XP_003523296.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 281/347 (80%), Positives = 311/347 (89%), Gaps = 4/347 (1%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEAL+CRKLGDPTVS+ D  SPIVLSK  PIPQL+S TAVRVR+KATSLN+ANYLQILGK
Sbjct: 1   MEALLCRKLGDPTVSLEDNNSPIVLSKNHPIPQLDSPTAVRVRIKATSLNFANYLQILGK 60

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           YQEKP LPF+PGSD+SG VDAVGP VSNF+VGD VC FAALGSFAQFIV DQ   F VP+
Sbjct: 61  YQEKPSLPFIPGSDFSGFVDAVGPKVSNFRVGDAVCSFAALGSFAQFIVVDQSQLFQVPQ 120

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           GCDL+AA AL VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVG+AAVQIGK CGA +IAV
Sbjct: 121 GCDLVAAGALAVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAV 180

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           ARGAEK++ LKSLGVDHVVDL NE+V  S+K+FL+AR+LKG+DVLYDPVGGKLTKESL+L
Sbjct: 181 ARGAEKVQLLKSLGVDHVVDLGNENVTQSIKQFLQARRLKGIDVLYDPVGGKLTKESLRL 240

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L WGA IL+IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W A
Sbjct: 241 LKWGAHILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPGVLEDSLKELLSWLA 300

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           +GLI+IHISH+Y  SEA LAFSAI+DRKVIGKVMI FD+ K+ R +L
Sbjct: 301 RGLISIHISHSYPLSEAYLAFSAIKDRKVIGKVMIVFDE-KTTRSKL 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228926|ref|NP_191205.1| GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana] gi|7594524|emb|CAB88049.1| quinone reductase-like protein [Arabidopsis thaliana] gi|24030344|gb|AAN41337.1| putative quinone reductase [Arabidopsis thaliana] gi|62320240|dbj|BAD94498.1| quinone reductase-like protein [Arabidopsis thaliana] gi|332646003|gb|AEE79524.1| GroES-like zinc-binding alcohol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/348 (77%), Positives = 306/348 (87%), Gaps = 4/348 (1%)

Query: 1   MEALVCRKLGDPTVSI-HDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT +     +SP+ +SKT PIP LNS T+VRVRV ATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTATNPGSPESPVEVSKTHPIPSLNSDTSVRVRVIATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           KYQEKPPLPF+PGSDYSG VDA+GP V+ F+VGD VC FA LGSFAQFIVADQ   F VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
           + CD++AAAALPVAFGTSHVALVHRA+L+SGQVLLVLGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           VARG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKLKGVDVLYDPVGGKLTKES+K
Sbjct: 181 VARGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKESMK 240

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct: 241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct: 301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516337|gb|AFK46230.1| unknown [Lotus japonicus]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 267/347 (76%), Positives = 305/347 (87%), Gaps = 4/347 (1%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVC+KLGDPT+ + D  +PI+LSK  PIPQL+S T+VRV++KATSLN+ANYLQILGK
Sbjct: 1   MEALVCKKLGDPTLGLEDNNTPIILSKNHPIPQLDSPTSVRVKIKATSLNFANYLQILGK 60

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           YQEKP LPF+PGSDYSG VDAVG  V +F+VGD VC F ALGSFA+++V D+   F VP 
Sbjct: 61  YQEKPTLPFIPGSDYSGIVDAVGSKVESFRVGDPVCSFIALGSFAEYLVVDETQLFRVPD 120

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           GCDL++A AL VAFGTSHVALVHRAQL+SGQVLLVLGAAGGVG+AAVQIGK CGA +IAV
Sbjct: 121 GCDLVSAGALAVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAV 180

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           ARGAEK++ LKS GVDHVVDL+NE+V  SVKEFLKARKLKG+DVLYDPVGGKLTKE L+L
Sbjct: 181 ARGAEKVQLLKSHGVDHVVDLTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRL 240

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L WGA IL+IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W A
Sbjct: 241 LKWGANILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPRVLEDSLKELLSWLA 300

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           +G+I++HISH+Y  SEANLAF AI+DRKVIGKVMI FD+ KS R +L
Sbjct: 301 RGMISVHISHSYPLSEANLAFGAIKDRKVIGKVMIVFDE-KSTRSKL 346

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820406|ref|XP_002878086.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297323924|gb|EFH54345.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  519 bits (1336), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/348 (77%), Positives = 306/348 (87%), Gaps = 4/348 (1%)

Query: 1   MEALVCRKLGDPTVS-IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT + + + +SP+ +SKT PIP LNS TAVRVRV ATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTATNLGNPESPVEVSKTHPIPSLNSDTAVRVRVIATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           KYQEKPPLPF+PGSDYSG VDA+GP V+  +VGD VC FA LGSFAQFIVADQ   F VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVDAIGPAVTKLRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
           + CD++AAAALPVAFGTSHVALVHRA+L+SGQVLLVLGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           V RG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKL+GVDVLYDPVGGKLTKES+K
Sbjct: 181 VGRGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLRGVDVLYDPVGGKLTKESMK 240

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct: 241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct: 301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516200|ref|XP_003526784.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Glycine max]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/348 (79%), Positives = 308/348 (88%), Gaps = 5/348 (1%)

Query: 1   MEALVCRKLGDPTVSIHD-EKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEAL+CRKLGDPTVS+ D + SPIVLSK  PIPQL+S TAVRVR+KATSLN+ANYLQILG
Sbjct: 1   MEALLCRKLGDPTVSLEDNDDSPIVLSKNHPIPQLDSPTAVRVRIKATSLNFANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           KYQEKP LPF+PGSD+SG VDAVG  VS F+VGD VC FA LGSFAQFIV D+   F VP
Sbjct: 61  KYQEKPSLPFIPGSDFSGFVDAVGSKVSKFRVGDAVCSFAGLGSFAQFIVVDESQLFQVP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
           +GCDL+AA AL VA GTSHVALVHRAQLSSGQVLLVLGAAGGVG+AAVQIGK CGA +IA
Sbjct: 121 QGCDLVAAGALAVASGTSHVALVHRAQLSSGQVLLVLGAAGGVGLAAVQIGKACGAIVIA 180

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           VARGAEK++ LKSLGVDHVVDL NE+V  S+K+FL+ARKLKG+DVLYDPVGGKLTKESL+
Sbjct: 181 VARGAEKVQLLKSLGVDHVVDLGNENVTQSIKQFLQARKLKGIDVLYDPVGGKLTKESLR 240

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           LL WGA IL+IGFASGEIP+IPANIALVKNWTVHGLYWGSYKIHRP VLEDSL+ELL W 
Sbjct: 241 LLKWGAHILIIGFASGEIPLIPANIALVKNWTVHGLYWGSYKIHRPGVLEDSLKELLSWL 300

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           A+GLI+IHISH+Y  SEANLAFSAI+DRKVIGKVMI FD+ K  R +L
Sbjct: 301 ARGLISIHISHSYPLSEANLAFSAIKDRKVIGKVMIVFDE-KPTRSKL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448349|ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Vitis vinifera] gi|297736646|emb|CBI25517.3| unnamed protein product [Vitis vinifera]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/347 (79%), Positives = 309/347 (89%), Gaps = 5/347 (1%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           MEALVCRK+GDPT+S  DE SPI +S +  IP LNS TAVRVRV+ATSLNYANYLQILGK
Sbjct: 1   MEALVCRKVGDPTLS--DETSPISVSASHLIPSLNSPTAVRVRVRATSLNYANYLQILGK 58

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           YQEKPP PF+PGSDYSG V++VGP+VS FK+GDTVC  AALGSFAQ+IV D+   F VP 
Sbjct: 59  YQEKPPHPFIPGSDYSGIVESVGPSVSMFKIGDTVCSVAALGSFAQYIVVDETELFRVPD 118

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           GCDL+AAAALPVAFGTSHVALVHRAQL+S QVLLVLGAAGGVG+AAVQIGKVCGAT+IAV
Sbjct: 119 GCDLVAAAALPVAFGTSHVALVHRAQLTSAQVLLVLGAAGGVGLAAVQIGKVCGATVIAV 178

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           ARGA K++ LKSLGVDHVVD S E+V  SVK FLKA+KLKGVDVLYDPVGGKLTKE++KL
Sbjct: 179 ARGAGKVQILKSLGVDHVVDSSIENVTESVKNFLKAKKLKGVDVLYDPVGGKLTKETMKL 238

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           LNWGA ILVIGFASGE+PVIPANIALVKNWTVHGLYWGSY+IHRP VLEDS++ELL W A
Sbjct: 239 LNWGAHILVIGFASGEVPVIPANIALVKNWTVHGLYWGSYRIHRPGVLEDSMKELLSWLA 298

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           +GLI IHISH+Y+ SEA+ AFSAI+DRK IGKVMIAFDD K++R +L
Sbjct: 299 RGLIEIHISHSYNLSEAHFAFSAIKDRKAIGKVMIAFDDHKTVRSKL 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447499|ref|XP_004141505.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Cucumis sativus] gi|449510675|ref|XP_004163730.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Cucumis sativus]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/348 (75%), Positives = 300/348 (86%), Gaps = 5/348 (1%)

Query: 1   MEALVCRKLGDPTVSI-HDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALVCRKLGDPT S   DE SP+VLSK  PIP LNS T+VRV++KATSLNYANYLQILG
Sbjct: 1   MEALVCRKLGDPTTSSPSDENSPVVLSKNHPIPPLNSPTSVRVQIKATSLNYANYLQILG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           KYQEKPPLPF+PGSDYSG V AVG  VS F+VGD VC FA  GSFAQFIV D+   F VP
Sbjct: 61  KYQEKPPLPFIPGSDYSGIVVAVGSKVSKFRVGDRVCSFAGDGSFAQFIVDDESRLFRVP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
            GCDL+AA ALPVAFGTSHVALVHRA L+ GQVLL+LGAAGGVG+AAVQIGKVCGA +IA
Sbjct: 121 DGCDLVAAGALPVAFGTSHVALVHRANLAPGQVLLILGAAGGVGLAAVQIGKVCGAVVIA 180

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           VARGA+K+++LKSLGVDHVVDL++++VI +VK FLK RKLKGVDVLYDPVGGKLTK+S+K
Sbjct: 181 VARGAKKVEYLKSLGVDHVVDLNHQNVIENVKAFLKERKLKGVDVLYDPVGGKLTKDSMK 240

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           LLNW A ILVIGFASGEIPVIP NIALVKNWTVHGLYWGSY IHRP VLE+S+ +LL W 
Sbjct: 241 LLNWSANILVIGFASGEIPVIPTNIALVKNWTVHGLYWGSYGIHRPQVLEESMNQLLSWL 300

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
           + GLI +HISH YSP EANLAF AI++R+ +GKV++ F+D K+++ +L
Sbjct: 301 STGLIRVHISHIYSPLEANLAFHAIKNREAVGKVVLVFED-KAVKSKL 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242077252|ref|XP_002448562.1| hypothetical protein SORBIDRAFT_06g029150 [Sorghum bicolor] gi|241939745|gb|EES12890.1| hypothetical protein SORBIDRAFT_06g029150 [Sorghum bicolor]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 241/336 (71%), Positives = 277/336 (82%), Gaps = 4/336 (1%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIV-LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           MEALV R+LGDPT++   E SP   +S   P+P+++S TAVRVRV ATSLN+A +LQ+ G
Sbjct: 1   MEALVVRRLGDPTLAPGGEASPFAAVSGDHPVPEISSPTAVRVRVAATSLNFATFLQVQG 60

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           KYQE+PPLPFVPGSDYSG VDAVGP V   + GD VC F  LGSFA FIVA++   F VP
Sbjct: 61  KYQERPPLPFVPGSDYSGVVDAVGPGVRGLRPGDRVCSFTGLGSFADFIVAEEKQLFLVP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
            GCDL+ A ALPVAFGTSH+ALVHRAQL +GQVLLVLGAAGGVGV+AVQIGKVCGA +IA
Sbjct: 121 DGCDLVTAGALPVAFGTSHLALVHRAQLKAGQVLLVLGAAGGVGVSAVQIGKVCGAVVIA 180

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           VARGAEK ++LKS+G DHVVD S ++V+ S K FLKAR LKGVDVLYDPVGGKLT++SLK
Sbjct: 181 VARGAEKSEYLKSIGADHVVDSSKDNVVESAKSFLKARGLKGVDVLYDPVGGKLTQDSLK 240

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           LL+WGA ILVIGFASG++PVI ANIALVKNWTVHGLYWGSY IHRP VL DSL ELL W 
Sbjct: 241 LLSWGAHILVIGFASGDVPVIRANIALVKNWTVHGLYWGSYLIHRPRVLIDSLNELLSWL 300

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           +KGLI + ISH Y   EA+LAFSA+ DRK +GKVMI
Sbjct: 301 SKGLIKVQISHCYRLVEAHLAFSALRDRKAVGKVMI 336

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
TAIR|locus:2102504	348	AT3G56460 [Arabidopsis thalian	1.0	0.988	0.735	1.8e-133
UNIPROTKB|Q48PR7	325	qor2 "Quinone oxidoreductase"	0.927	0.981	0.340	1.2e-49
TIGR_CMR|SPO_2960	318	SPO_2960 "oxidoreductase, zinc	0.892	0.965	0.371	2e-49
RGD|1304982	350	RGD1304982 "similar to RIKEN c	0.898	0.882	0.345	3.5e-43
UNIPROTKB|Q0BWZ7	329	HNE_3323 "Putative quinone oxi	0.845	0.884	0.356	1.2e-42
MGI|MGI:2448516	350	BC026585 "cDNA sequence BC0265	0.898	0.882	0.339	1.2e-42
UNIPROTKB|F1PV34	350	LOC610994 "Uncharacterized pro	0.904	0.888	0.334	3.2e-42
UNIPROTKB|J9P068	375	LOC610994 "Uncharacterized pro	0.904	0.829	0.334	3.2e-42
UNIPROTKB|F1NVJ2	347	LOC424430 "Uncharacterized pro	0.872	0.864	0.357	1.7e-41
UNIPROTKB|A6QQF5	349	A6QQF5 "Quinone oxidoreductase	0.898	0.885	0.336	9.6e-41

TAIR|locus:2102504 AT3G56460 [Arabidopsis thaliana (taxid:3702)]

 Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
 Identities = 256/348 (73%), Positives = 290/348 (83%)

Query:     1 MEALVCRKLGDPTVSIHDE-KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
             MEALVCRKLGDPT +     +SP+ +SKT PIP LNS T+VRVRV ATSLNYANYLQILG
Sbjct:     1 MEALVCRKLGDPTATNPGSPESPVEVSKTHPIPSLNSDTSVRVRVIATSLNYANYLQILG 60

Query:    60 KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
             KYQEKPPLPF+PGSDYSG VDA+GP V+ F+VGD VC FA LGSFAQFIVADQ   F VP
Sbjct:    61 KYQEKPPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query:   117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIA 176
             + CD++AAAALPVAFGTSHVALVHRA+L+SGQ                QIGKVCGA +IA
Sbjct:   121 ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query:   177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
             VARG EKI+ LKS+GVDHVVDL  E+VI SVKEF+K RKLKGVDVLYDPVGGKLTKES+K
Sbjct:   181 VARGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKESMK 240

Query:   237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
             +L WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY+IH+P+VLEDS++ELL W 
Sbjct:   241 VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query:   297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIRPRL 344
             ++GLITIHISHTYS S+ANLAF  ++DRK IGKVMIA D   ++  +L
Sbjct:   301 SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

UNIPROTKB|Q48PR7 qor2 "Quinone oxidoreductase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 114/335 (34%), Positives = 178/335 (53%)

Query:     1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
             M+AL+C+  G P        S +VL    P P++  +  + + V A  +N+ + L I GK
Sbjct:     1 MKALLCKAFG-PA-------STLVLEDV-PGPEIKKNE-ILLDVHAAGVNFPDTLIIEGK 50

Query:    61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQF---PVPK 117
             YQ KPP PF PG + +G + AVG  V++ K GD V      GSFA+ +    +   P+P 
Sbjct:    51 YQFKPPFPFSPGGEAAGVISAVGEKVTHLKPGDRVMALTGWGSFAEQVAVPGYNVLPIPT 110

Query:   118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 177
               D   AAA  + +GTS  AL  RA L +G+                +IGK  GA +IA 
Sbjct:   111 SMDFTTAAAFSMTYGTSMHALKQRANLQAGETLLVLGASGGVGLAAVEIGKALGARVIAA 170

Query:   178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
             A  AEK++  K+ G D +++ S  S+   VK         G DV+YDPVGG L  ++++ 
Sbjct:   171 ASSAEKLEVAKNAGADELINYSETSLKDEVKRLTNDN---GADVIYDPVGGDLFDQAIRA 227

Query:   238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
             + W  ++LV+GFASG IP +P N+ L+K  +V G++WGS+   +P     + ++L  W  
Sbjct:   228 IAWNGRLLVVGFASGRIPDLPVNLTLLKGASVVGVFWGSFAQRQPQDNAANFKQLFAWFE 287

Query:   298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             +G +   +S  Y   +A  A   + +R+ +GKV++
Sbjct:   288 EGKLKPLVSTVYPLEKAGEAIDLLGERRAVGKVVV 322

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

TIGR_CMR|SPO_2960 SPO_2960 "oxidoreductase, zinc-binding dehydrogenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 120/323 (37%), Positives = 177/323 (54%)

Query:    15 SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
             ++    SP  L   +P+P+  +   VR+ ++A  LN+A+ L   G YQ+ PP PF  G +
Sbjct:     5 TVQSAGSPAQLID-QPVPE-PAPGQVRIDIRACGLNFADLLMQKGTYQDTPPAPFTLGME 62

Query:    75 YSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIV--ADQ-FPVPKGCDLLAAAALPVAF 131
              +GT++A+G  VS+ KVGD +  +   G  A+  V  AD+  P+P       AAA  +A+
Sbjct:    63 VAGTINALGTGVSHLKVGDRIAIYTGQGGLAEQGVFDADRALPLPDTMSFEHAAAFQIAY 122

Query:   132 GTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLG 191
             GTSH+AL HRA+L  G+                +IGK+ GA +IA ARGA+K++  +  G
Sbjct:   123 GTSHMALDHRARLQPGETLLVTGAAGGVGLTAVEIGKLMGARVIAQARGADKLEIARQAG 182

Query:   192 VDHVVDLSNESVIPSVKEFLKARKLK--GVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
              D ++D   +         L+AR L   GVDV+YD +GG + K + +  N  A++L IGF
Sbjct:   183 ADILIDADED---------LRARLLDLGGVDVVYDAIGGDVFKAAFRAANPEARLLPIGF 233

Query:   250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY 309
             A GE+P IPAN  LV+N TV G Y G Y   RP V+ +S + LL W  +G +  H+SH  
Sbjct:   234 AGGEVPQIPANHLLVRNLTVIGFYIGGYLSFRPEVIRNSFQTLLDWYQQGRLHPHVSHIL 293

Query:   310 SPSEANLAFSAIEDRKVIGKVMI 332
                 A      + +R   GKV+I
Sbjct:   294 PLERAAEGLELLRNRTATGKVVI 316

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

RGD|1304982 RGD1304982 "similar to RIKEN cDNA 2810025M15" [Rattus norvegicus (taxid:10116)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 110/318 (34%), Positives = 164/318 (51%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct:    36 KQPLTIQEVAPRPI--GPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVV 93

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV 136
                G +VS  K GD V G +   S A+  + DQ   + +P+   L  AA LPV++GT+ +
Sbjct:    94 LEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query:   137 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 195
             A+ HRA++  G+                 +   V  A +IA A   EK K     G    
Sbjct:   154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFCAKVIAAAGSDEKCKLAMQRGAQSG 213

Query:   196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
             V+ S  S+  +VK+ + +    GV+V  D VGG +  +SL+ L W  +I+V+GFA G I 
Sbjct:   214 VNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIA 270

Query:   256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
              +P+N+ L+KN +  GLYWG Y+     V   S+   L +  +GLI  H    +   + N
Sbjct:   271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVN 330

Query:   316 LAFSAIEDRKVIGKVMIA 333
              AF  +  RK  GKV+++
Sbjct:   331 DAFLHVMQRKSTGKVLLS 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q0BWZ7 HNE_3323 "Putative quinone oxidoreductase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 107/300 (35%), Positives = 158/300 (52%)

Query:    40 VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
             V V+VKA  +NY + L I   YQ KPP PF PG + +G V AVG  VS+ K GD V    
Sbjct:    30 VLVQVKACGVNYPDVLIIQDMYQFKPPRPFSPGGEVAGIVSAVGEGVSHVKPGDRVLAST 89

Query:   100 ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
               G  A++ +A      P+P+G     AAA  + +GTS+ A+  R     G+        
Sbjct:    90 GNGGMAEYCLAAAHGVMPIPEGMPFEEAAAFLMTYGTSYYAIKDRGDPKPGEKLLVLGAA 149

Query:   157 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF---LKA 213
                     ++GK  G  +IA A   EK+ F  S G DH +  + E      K+F   +KA
Sbjct:   150 GGVGIAAVELGKAMGLEVIAAASSQEKVDFCLSKGADHGLVYARELDRDGQKKFSDDIKA 209

Query:   214 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 273
                 GVD++YD VGG   + +++ +NW  + LVIGF +G IP +P N+ L+K+  V G++
Sbjct:   210 VSGGGVDIIYDGVGGNYAEPAVRAMNWEGRFLVIGFPAG-IPKLPLNLTLLKSCDVRGVF 268

Query:   274 WGSYKIHRPHVLEDSLRELL-LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             WG+     P   + +++EL  L+ A G I  HIS +Y   +A  A   ++DRK  GKV++
Sbjct:   269 WGAAVARDPKAHQQNVKELFDLYKA-GKIRPHISGSYPMEKAADAIRELQDRKAQGKVVV 327

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

MGI|MGI:2448516 BC026585 "cDNA sequence BC026585" [Mus musculus (taxid:10090)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 108/318 (33%), Positives = 163/318 (51%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V
Sbjct:    36 KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAV 93

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV 136
                G +VS  K GD V G ++  + A+  + DQ   + +P+   L  AA LPV++GT+ +
Sbjct:    94 LETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAIL 153

Query:   137 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 195
             A+ HRA++  G+                 +   V  A +IA     EK K     G    
Sbjct:   154 AVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFS 213

Query:   196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
             V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I 
Sbjct:   214 VNYSQGSLRDAVKKLAGSG---GVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIA 270

Query:   256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
              +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N
Sbjct:   271 SVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKIN 330

Query:   316 LAFSAIEDRKVIGKVMIA 333
              AF  +  RK  GKV+++
Sbjct:   331 DAFLHVMQRKSTGKVLLS 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1PV34 LOC610994 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 107/320 (33%), Positives = 162/320 (50%)

Query:    18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
             + K P+ + +  P P       VRV V    +N+A+ L   G+YQEKP LPF PG ++SG
Sbjct:    34 EPKQPLAVEEVGPRPVRPHE--VRVDVHFCGVNFADILVCRGQYQEKPQLPFTPGMEFSG 91

Query:    78 TVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTS 134
              V   G +VS  K GD V G +     A+  + DQ   + +P+G  L  AA LPV++GT+
Sbjct:    92 IVLETGADVSTVKEGDRVIGVSGFNGMAEECIIDQKTLWQIPEGVSLREAATLPVSYGTA 151

Query:   135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVD 193
              +AL HRA    G+                 +   +  A +IA     EK + +   G  
Sbjct:   152 LLALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAVGSDEKCQLVMQKGAQ 211

Query:   194 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE 253
              VV+ S   +  +V++ + +    GV+V+ D VGG +  E+L+ L W  +I+V+GFA G 
Sbjct:   212 SVVNYSQGGLKEAVRKLVGS---VGVNVVIDTVGGDVFLEALRSLAWEGRIVVVGFAGGT 268

Query:   254 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 313
             I  +PAN+ L+KN +  GLYW  YK     +   +L   L +  +G I  HI   +   +
Sbjct:   269 IASVPANLLLLKNVSAMGLYWSRYKEQNFPIFSRTLSSALQYCQQGRIQPHIGAVFKLEK 328

Query:   314 ANLAFSAIEDRKVIGKVMIA 333
              N AF  +  RK  GKV+I+
Sbjct:   329 VNDAFLHVIQRKSTGKVLIS 348

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9P068 LOC610994 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 107/320 (33%), Positives = 162/320 (50%)

Query:    18 DEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77
             + K P+ + +  P P       VRV V    +N+A+ L   G+YQEKP LPF PG ++SG
Sbjct:    59 EPKQPLAVEEVGPRPVRPHE--VRVDVHFCGVNFADILVCRGQYQEKPQLPFTPGMEFSG 116

Query:    78 TVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTS 134
              V   G +VS  K GD V G +     A+  + DQ   + +P+G  L  AA LPV++GT+
Sbjct:   117 IVLETGADVSTVKEGDRVIGVSGFNGMAEECIIDQKTLWQIPEGVSLREAATLPVSYGTA 176

Query:   135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVD 193
              +AL HRA    G+                 +   +  A +IA     EK + +   G  
Sbjct:   177 LLALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAVGSDEKCQLVMQKGAQ 236

Query:   194 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE 253
              VV+ S   +  +V++ + +    GV+V+ D VGG +  E+L+ L W  +I+V+GFA G 
Sbjct:   237 SVVNYSQGGLKEAVRKLVGS---VGVNVVIDTVGGDVFLEALRSLAWEGRIVVVGFAGGT 293

Query:   254 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 313
             I  +PAN+ L+KN +  GLYW  YK     +   +L   L +  +G I  HI   +   +
Sbjct:   294 IASVPANLLLLKNVSAMGLYWSRYKEQNFPIFSRTLSSALQYCQQGRIQPHIGAVFKLEK 353

Query:   314 ANLAFSAIEDRKVIGKVMIA 333
              N AF  +  RK  GKV+I+
Sbjct:   354 VNDAFLHVIQRKSTGKVLIS 373

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NVJ2 LOC424430 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 110/308 (35%), Positives = 155/308 (50%)

Query:    30 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
             P P+L     VRVRV  + LN+A+ L   G YQEK   PF PG ++SGTV   G NVS  
Sbjct:    42 PAPRLQPRQ-VRVRVHYSGLNFADILACQGLYQEKHAPPFTPGMEFSGTVMETGENVSAV 100

Query:    90 KVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 146
             K G  V G   + + A+  V D+   + +P       AA LPVA+GT+ +AL HRA L  
Sbjct:   101 KEGHRVIGVTGISAMAEECVVDEKALWQIPDNVSSEDAAVLPVAYGTAWLALHHRAHLQP 160

Query:   147 GQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
              +                 +   V  A +IA A    K + + + G  H V+ S  S+  
Sbjct:   161 RETVLVTAGAGATGLAIIDLAVNVFQAKVIAAAGSDPKCQLVLANGASHAVNYSQNSLRE 220

Query:   206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK 265
              V      R   GVDV  + VGG + K  L+ L W  +I+V+GFA G+IP IPAN+ L+K
Sbjct:   221 QVTALTGGR---GVDVAIEAVGGDIFKAVLQSLAWEGRIVVMGFAGGKIPSIPANLLLLK 277

Query:   266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 325
             N +  G+YW  Y+     +   ++  LL +  +G I  HI   +   E N AF+ +  RK
Sbjct:   278 NVSAMGVYWSRYQQEDFPLFSSAMSSLLQYGREGKIHPHIGAVFKLEEVNEAFNHVLQRK 337

Query:   326 VIGKVMIA 333
               GKV+I+
Sbjct:   338 STGKVIIS 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|A6QQF5 A6QQF5 "Quinone oxidoreductase-like protein 2" [Bos taurus (taxid:9913)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 107/318 (33%), Positives = 158/318 (49%)

Query:    20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
             K P+V+ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V
Sbjct:    35 KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMV 92

Query:    80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV 136
                G +VS  K GD V G       A+  + D    + +P+   L  AAALPV++GT+  
Sbjct:    93 LETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIF 152

Query:   137 ALVHRAQLSSGQXXXXXXXXXXXXXXXXQIG-KVCGATIIAVARGAEKIKFLKSLGVDHV 195
             AL HRA    G+                 +   +  A +IA A   EK +     G    
Sbjct:   153 ALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSS 212

Query:   196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
             V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I 
Sbjct:   213 VNYSRGSLKEAVGKLVGSG---GVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIA 269

Query:   256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
              +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N
Sbjct:   270 SVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVN 329

Query:   316 LAFSAIEDRKVIGKVMIA 333
              AF  +  RK  GKV+++
Sbjct:   330 DAFLHVTQRKSTGKVLLS 347

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6QQF5	QORL2_BOVIN	1, ., -, ., -, ., -	0.3573	0.9011	0.8882	yes	no
B0BNC9	QORL2_RAT	1, ., -, ., -, ., -	0.3586	0.9476	0.9314	yes	no
Q3UNZ8	QORL2_MOUSE	1, ., -, ., -, ., -	0.3605	0.9011	0.8857	yes	no
P38230	QOR_YEAST	1, ., 6, ., 5, ., 5	0.3228	0.8313	0.8562	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.48	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	344
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-146
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-72
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	4e-62
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-61
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-61
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-59
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-56
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-55
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-55
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	3e-54
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-53
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-51
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-51
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-50
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	8e-50
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	8e-49
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	4e-48
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	4e-48
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-45
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	1e-43
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	3e-43
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-42
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-41
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-40
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-39
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	1e-38
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-36
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-36
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	6e-36
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-35
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	6e-35
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-32
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-32
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-31
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-30
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-30
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	3e-29
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-28
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-27
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	4e-27
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	8e-26
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-25
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-24
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-24
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-23
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-23
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-22
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-22
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-22
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-22
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	3e-22
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-21
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	3e-21
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-20
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-20
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	8e-20
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	8e-20
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-19
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-19
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-18
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-18
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-18
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	2e-18
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-18
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	5e-18
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-18
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-17
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-17
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	4e-17
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-16
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-16
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	4e-16
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	1e-15
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-15
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-14
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-14
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	5e-13
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	7e-13
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-12
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	1e-12
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-12
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	8e-12
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	1e-11
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	2e-11
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-11
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	3e-11
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-11
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-11
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	4e-11
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	2e-10
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-10
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-10
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	3e-09
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-09
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	4e-09
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	1e-08
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	3e-08
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	5e-08
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	9e-08
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-07
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-06
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	6e-06
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-05
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-04
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-04
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-04
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-04
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-04
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	0.001

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  415 bits (1069), Expect = e-146
 Identities = 156/335 (46%), Positives = 210/335 (62%), Gaps = 16/335 (4%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+VC++LG P          +VL +  P P       VR+RV+A  +N+ + L I GK
Sbjct: 1   MKAVVCKELGGPED--------LVLEEVPPEPGAPGE--VRIRVEAAGVNFPDLLMIQGK 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           YQ KPPLPFVPGS+ +G V+AVG  V+ FKVGD V      G FA+ +V      FP+P 
Sbjct: 51  YQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPD 110

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           G     AAALPV +GT++ ALV RA+L  G+ +LVLGAAGGVG+AAVQ+ K  GA +IA 
Sbjct: 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAA 170

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           A   EK+   ++LG DHV+D  +  +   VK        +GVDV+YDPVGG + + SL+ 
Sbjct: 171 ASSEEKLALARALGADHVIDYRDPDLRERVKA---LTGGRGVDVVYDPVGGDVFEASLRS 227

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L WG ++LVIGFASGEIP IPAN+ L+KN +V G+YWG+Y    P +L  +L EL    A
Sbjct: 228 LAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLA 287

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           +G I  H+S  +   +A  A  A+ DRK  GKV++
Sbjct: 288 EGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  227 bits (581), Expect = 2e-72
 Identities = 121/341 (35%), Positives = 171/341 (50%), Gaps = 22/341 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V  + G P V         +     P P+      V VRVKA  +N  + L   G 
Sbjct: 1   MKAVVVEEFGGPEV---------LKVVEVPEPEP-GPGEVLVRVKAAGVNPIDVLVRQGL 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQ---FP 114
                PLPF+PGS+ +G V AVG  V+ FKVGD V     +   G +A+++V       P
Sbjct: 51  APPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVP 110

Query: 115 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 174
           +P G     AAALP+A  T+ +AL  RA L  G+ +LV GAAGGVG AA+Q+ K  GAT+
Sbjct: 111 LPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV 170

Query: 175 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 234
           +AV   +EK++ LK LG DHV++   E  +  V+E       KGVDV+ D VGG     S
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGG---KGVDVVLDTVGGDTFAAS 227

Query: 235 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 294
           L  L  G +++ IG  SG  P +P N+  +    +            P  L ++L EL  
Sbjct: 228 LAALAPGGRLVSIGALSG-GPPVPLNLLPLLGKRLTLRGVTLG-SRDPEALAEALAELFD 285

Query: 295 WAAKGLITIHISHTYSPSEANLAF-SAIEDRKVIGKVMIAF 334
             A G +   I   Y  +EA  A    + +R+  GKV++  
Sbjct: 286 LLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  200 bits (510), Expect = 4e-62
 Identities = 102/341 (29%), Positives = 148/341 (43%), Gaps = 41/341 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+   + G P V    +          P P+      V V+V A  +N  +     G 
Sbjct: 1   MKAVRIHEYGGPEVLELAD---------VPTPEPGPGE-VLVKVHAAGVNPVDLKIREGL 50

Query: 61  YQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQ--- 112
            +   P  LP +PG D +G V AVGP V+ FKVGD V G       G++A+++V      
Sbjct: 51  LKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADEL 110

Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
              P       AAALP+A  T+  AL     L +GQ +L+ GAAGGVG  AVQ+ K  GA
Sbjct: 111 ALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA 170

Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
            +IA A  A    FL+SLG D V+D +          F +A    GVD + D VGG+   
Sbjct: 171 RVIATA-SAANADFLRSLGADEVIDYTKGD-------FERAAAPGGVDAVLDTVGGETLA 222

Query: 233 ESLKLLNWGAQIL-VIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE 291
            SL L+  G +++ + G    E           +     G+  G   +       + L E
Sbjct: 223 RSLALVKPGGRLVSIAGPPPAE-----------QAAKRRGVRAGFVFVEPDG---EQLAE 268

Query: 292 LLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           L      G +   +   +   +A  A   +E     GKV++
Sbjct: 269 LAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  199 bits (508), Expect = 2e-61
 Identities = 112/362 (30%), Positives = 165/362 (45%), Gaps = 52/362 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V R  G P V         +     P P+      V VRVKA +LN+ +     G 
Sbjct: 1   MKAVVIRGHGGPEV---------LEYGDLPEPEPGPD-EVLVRVKAAALNHLDLWVRRGM 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------------F 98
              K PLP + GSD +G V+AVGP V+N K G  V       CG               +
Sbjct: 51  PGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY 110

Query: 99  AALG-----SFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL 150
             LG      +A+++     +  P+P       AAA P+ F T+   LV RA+L  G+ +
Sbjct: 111 GILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETV 170

Query: 151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 210
           LV GA  GVG AA+QI K+ GAT+IA A   +K++  K LG D+V+D   E  +  V+E 
Sbjct: 171 LVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVREL 230

Query: 211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVH 270
              R   GVDV+ + VG    ++SLK L  G +++  G  +G    I       +  ++ 
Sbjct: 231 TGKR---GVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSIL 287

Query: 271 GLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 330
           G   G+            L E L    +G +   I   +   EA  A   +E R+  GK+
Sbjct: 288 GSTMGTK---------AELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKI 338

Query: 331 MI 332
           ++
Sbjct: 339 VL 340

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  198 bits (506), Expect = 3e-61
 Identities = 111/335 (33%), Positives = 158/335 (47%), Gaps = 31/335 (9%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF--- 69
           + I +   P VL   E P P       V +RV A  +N A+ LQ  G Y   PP P    
Sbjct: 4   IVIKEPGGPEVLELGEVPKPAPGP-GEVLIRVAAAGVNRADLLQRQGLY---PPPPGASD 59

Query: 70  VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAA 126
           + G + +G V AVGP V+ +KVGD VC   A G +A+++V       PVP+G  L+ AAA
Sbjct: 60  ILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAA 119

Query: 127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 186
           LP  F T+   L     L +G+ +L+ G A GVG AA+Q+ K  GA +IA A   EK++ 
Sbjct: 120 LPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA 179

Query: 187 LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 246
            ++LG D  ++   E     VKE    R   GVDV+ D VGG     +L+ L    ++++
Sbjct: 180 CRALGADVAINYRTEDFAEEVKEATGGR---GVDVILDMVGGDYLARNLRALAPDGRLVL 236

Query: 247 IGFASGEIPVIPANIALVKNWTVHGLYWGS--------YKIHRPHVLEDSLRELLL-WAA 297
           IG   G    +     L K  T+     GS         K      L  + RE +    A
Sbjct: 237 IGLLGGAKAELDLAPLLRKRLTLT----GSTLRSRSLEEKAA----LAAAFREHVWPLFA 288

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
            G I   I   +   EA  A   +E  + IGK+++
Sbjct: 289 SGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  193 bits (492), Expect = 3e-59
 Identities = 101/340 (29%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V    +          P+P       V VRV A+ +N  +     G 
Sbjct: 1   MRAIRYHEFGAPDVLRLGDL---------PVPTPGP-GEVLVRVHASGVNPVDTYIRAGA 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAAL----GSFAQFIVADQ--- 112
           Y   PPLP+VPGSD +G V+AVG  V   KVGD V           G+ A+++V      
Sbjct: 51  YPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQL 110

Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
            P+P G      AAL +   T++ AL HRA   +G+ +LV G +G VG AAVQ+ +  GA
Sbjct: 111 VPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
            +IA A  AE  + ++  G D V +   E +   +      +   GVDV+ + +      
Sbjct: 171 RVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQ---GVDVIIEVLANVNLA 227

Query: 233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 292
           + L +L  G +I+V G        IP N  + K  ++ G+   +     P     +   +
Sbjct: 228 KDLDVLAPGGRIVVYGSGGLR-GTIPINPLMAKEASIRGVLLYT---ATPEERAAAAEAI 283

Query: 293 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
               A G +   I+  Y   EA  A  A+E    IGKV++
Sbjct: 284 AAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  185 bits (473), Expect = 3e-56
 Identities = 115/332 (34%), Positives = 164/332 (49%), Gaps = 35/332 (10%)

Query: 24  VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
           V  +  P P       VRVRV+A  LN+A+ +   G Y   P  PFVPG + +GTV+AVG
Sbjct: 16  VEKEALPEPSSGE---VRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVG 72

Query: 84  PNVSNFKVGDTVCGFAALGSFAQFIV--ADQ-FPVPKGCDLLAAAALPVAFGTSHVALVH 140
             V +FKVGD V G    G +A+ +   ADQ FP+P G     AAA PV + T++ AL  
Sbjct: 73  EGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFE 132

Query: 141 RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
              L  GQ +LV  AAGGVG+AA Q+ K V   T++  A  A K + LK  GV HV+D  
Sbjct: 133 LGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYR 191

Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA---SGEIPV 256
            +  +  VK+       +GVD++ D +GG+ T++S  LL    +++V G A   +GE   
Sbjct: 192 TQDYVEEVKKIS----PEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRS 247

Query: 257 IPANIALVKNW----------------TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 300
                 L K W                +V G   G +      +L + + +LL    +G 
Sbjct: 248 W---FKLAKKWWNRPKVDPMKLISENKSVLGFNLG-WLFEERELLTEVMDKLLKLYEEGK 303

Query: 301 ITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           I   I   +   E   A   ++ RK IGKV++
Sbjct: 304 IKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVL 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  182 bits (464), Expect = 2e-55
 Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 22/303 (7%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V VKA  LN+ + L  LG            G + SG V  VG  V+  KVGD V G A
Sbjct: 3   VEVEVKAAGLNFRDVLVALGLLPGDET---PLGLECSGIVTRVGSGVTGLKVGDRVMGLA 59

Query: 100 ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 156
             G+FA  +  D      +P       AA LPVA+ T++ ALV  A+L  G+ +L+  AA
Sbjct: 60  P-GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAA 118

Query: 157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG--VDHVVDLSNESVIPS-VKEFLKA 213
           GGVG AA+Q+ +  GA + A     EK +FL+ LG  VDH+      S   S     L+A
Sbjct: 119 GGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFS----SRDLSFADGILRA 174

Query: 214 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTV 269
              +GVDV+ + + G+L + S + L    + + IG     ++ ++ + P     ++N + 
Sbjct: 175 TGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP----FLRNVSF 230

Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
             +        RP +L + LRE+L     G++          +    AF  ++  K IGK
Sbjct: 231 SSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGK 290

Query: 330 VMI 332
           V++
Sbjct: 291 VVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  183 bits (466), Expect = 2e-55
 Identities = 103/324 (31%), Positives = 148/324 (45%), Gaps = 13/324 (4%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V IH    P VL   + P+P+      V VR  A  +N+ +     G Y    PLPFV G
Sbjct: 3   VRIHKTGGPEVLEYEDVPVPEP-GPGEVLVRNTAIGVNFIDTYFRSGLY--PLPLPFVLG 59

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
            + +G V+AVGP V+ FKVGD V      G++A++ V        +P G     AAAL +
Sbjct: 60  VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLL 119

Query: 130 AFGTSHVALVHRA-QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 188
              T+H  L+     +  G  +LV  AAGGVG+   Q  K  GAT+I      EK +  +
Sbjct: 120 QGLTAH-YLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
           + G DHV++  +E  +  V+E    R   GVDV+YD VG    + SL  L     ++  G
Sbjct: 179 AAGADHVINYRDEDFVERVREITGGR---GVDVVYDGVGKDTFEGSLDSLRPRGTLVSFG 235

Query: 249 FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT 308
            ASG +P          +  +       Y I     L     EL    A G + + I   
Sbjct: 236 NASGPVPPFDLLRLSKGSLFLTRPSLFHY-IATREELLARAAELFDAVASGKLKVEIGKR 294

Query: 309 YSPSEANLAFSAIEDRKVIGKVMI 332
           Y  ++A  A   +E RK  GK+++
Sbjct: 295 YPLADAAQAHRDLESRKTTGKLLL 318

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  180 bits (458), Expect = 3e-54
 Identities = 107/350 (30%), Positives = 155/350 (44%), Gaps = 40/350 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+ALV    G P V              E P PQ      V VRV A+ +N  +     G
Sbjct: 1   MKALVLESFGGPEV----------FELREVPRPQP-GPGQVLVRVHASGVNPLDTKIRRG 49

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQ-- 112
               +PPLP + G D +G V+AVG  V+ F+VGD V G A       GS A++ V D   
Sbjct: 50  GAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL 109

Query: 113 -FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 171
               P    +  AAALP+   T+   LV RA + +GQ +L+ G AGGVG  AVQ+ K  G
Sbjct: 110 LALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAG 169

Query: 172 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
           A + A A   EK  F +SLG D ++          V+   +    +G DV++D VGG+  
Sbjct: 170 ARVYATASS-EKAAFARSLGADPIIYYRET----VVEYVAEHTGGRGFDVVFDTVGGETL 224

Query: 232 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG------LYWGSYKIHRPHVL 285
             S + +    +++ I        + P +    +N T  G      L  G  + H  H  
Sbjct: 225 DASFEAVALYGRVVSI-LGGATHDLAPLSF---RNATYSGVFTLLPLLTGEGRAH--HG- 277

Query: 286 EDSLRELLLWAAKGLITIHIS-HTYSPSEANLAFSAIEDRKVIGKVMIAF 334
            + LRE      +G +   +   T+   EA  A + +E     GK++I  
Sbjct: 278 -EILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  178 bits (454), Expect = 2e-53
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 9/324 (2%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           + I +   P VL   E P+P   +   V +RV A  +N  + LQ  GKY   P    + G
Sbjct: 4   IEITEPGGPEVLVLVEVPLPVPKAGE-VLIRVAAAGVNRPDLLQRAGKYPPPPGASDILG 62

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
            + +G V AVG  VS +KVGD VC   A G +A+++        PVP+G  L+ AAALP 
Sbjct: 63  LEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPE 122

Query: 130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 189
            F T    L  R  L +G+ +L+ G A G+G  A+Q+ K  GA +   A   EK    ++
Sbjct: 123 TFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA 182

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
           LG D  ++   E  +  VK        KGVDV+ D VGG     ++K L    +I+ IGF
Sbjct: 183 LGADIAINYREEDFVEVVKAETGG---KGVDVILDIVGGSYLNRNIKALALDGRIVQIGF 239

Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL-WAAKGLITIHISHT 308
             G    +     L K  T+ G    +  +     +   LRE +    A G +   I   
Sbjct: 240 QGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKV 299

Query: 309 YSPSEANLAFSAIEDRKVIGKVMI 332
           +   +A  A + +E    IGK+++
Sbjct: 300 FPLEDAAQAHALMESGDHIGKIVL 323

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  172 bits (439), Expect = 1e-51
 Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 28/303 (9%)

Query: 42  VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101
           + V+A  LN+ + L  LG Y  +  L    G + +G V  VGP V+   VGD V G A  
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPGEAVL----GGECAGVVTRVGPGVTGLAVGDRVMGLAP- 55

Query: 102 GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 158
           G+FA  +V D     P+P G     AA +PV F T++ ALV  A+L  G+ +L+  AAGG
Sbjct: 56  GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGG 115

Query: 159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKL 216
           VG AA+Q+ +  GA + A A   EK  FL++LG+  DH+    + S      E L+A   
Sbjct: 116 VGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSF---ADEILRATGG 172

Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHG- 271
           +GVDV+ + + G+    SL+ L  G + + IG      + ++ + P       N + H  
Sbjct: 173 RGVDVVLNSLSGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLAMAPFR----PNVSYHAV 228

Query: 272 -LYWGSYKIHRPHVLEDSLRELL-LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
            L         P  + + L E+L L+A   L  + +   +  S+A  AF  ++  K IGK
Sbjct: 229 DL---DALEEGPDRIRELLAEVLELFAEGVLRPLPV-TVFPISDAEDAFRYMQQGKHIGK 284

Query: 330 VMI 332
           V++
Sbjct: 285 VVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  173 bits (441), Expect = 2e-51
 Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 11/241 (4%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V +RV+A  LN A+ +   G Y E PPLP   G + +G V+AVG  V+ F VGD V    
Sbjct: 30  VLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIP 89

Query: 100 AL-----GSFAQFIVA---DQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 151
           A      G++A++ +        +P G   + AAAL + + T++ ALV  A L  G  +L
Sbjct: 90  AADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVL 149

Query: 152 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL 211
           +  A+  VG+AA+QI    GAT+IA  R +EK   L +LG  HV+    E +   V E L
Sbjct: 150 ITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDL---VAEVL 206

Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
           +    KGVDV++DPVGG    +    L  G  ++V G  SGE    P   AL K+ T  G
Sbjct: 207 RITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRG 266

Query: 272 L 272
            
Sbjct: 267 Y 267

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  171 bits (436), Expect = 1e-50
 Identities = 101/332 (30%), Positives = 139/332 (41%), Gaps = 39/332 (11%)

Query: 28  TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS 87
            EP+P+      V VRV A SLNY + L + G+Y      P +P SD +G V AVG  V+
Sbjct: 19  EEPVPEPGPGE-VLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVT 77

Query: 88  NFKVGDTVC---------------------GFAALGSFAQFIVADQ---FPVPKGCDLLA 123
            FKVGD V                      G    G  A+++V  +      P       
Sbjct: 78  RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEE 137

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
           AA LP A  T+  AL     L  G  +LV G  GGV + A+Q  K  GA +IA +   EK
Sbjct: 138 AATLPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEK 196

Query: 184 IKFLKSLGVDHVVDLSNESVIPS-VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 242
           ++  K+LG DHV+   N    P   +E LK    +GVD + +  G     +S+K +  G 
Sbjct: 197 LERAKALGADHVI---NYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGG 253

Query: 243 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 302
            I +IGF SG    +     L K  T+ G+  GS               +        I 
Sbjct: 254 VISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSR---------AQFEAMNRAIEAHRIR 304

Query: 303 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
             I   +   EA  A+  +E     GKV+I  
Sbjct: 305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  167 bits (424), Expect = 8e-50
 Identities = 92/266 (34%), Positives = 125/266 (46%), Gaps = 32/266 (12%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V VRV+A  L   +     G Y   P LP + G + +G V  VGP V+  KVGD V    
Sbjct: 2   VLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLP 61

Query: 97  --------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGT 133
                               G    G FA+++V       P+P G  L  AA LP    T
Sbjct: 62  NLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLAT 121

Query: 134 SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD 193
           ++ AL     L  G  +LVLG AGGVG+ A Q+ K  GA +I   R  EK++  K LG D
Sbjct: 122 AYHALRRAGVLKPGDTVLVLG-AGGVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD 180

Query: 194 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASG 252
           HV+D   E     ++E L+     G DV+ D VGG  T  ++L+LL  G +I+V+G  SG
Sbjct: 181 HVIDYKEE----DLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG 236

Query: 253 EIPVIPANIALVKNWTVHGLYWGSYK 278
             P+      L K  T+ G   G+ +
Sbjct: 237 GPPLDDLRRLLFKELTIIGSTGGTRE 262

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  166 bits (422), Expect = 8e-49
 Identities = 91/320 (28%), Positives = 144/320 (45%), Gaps = 9/320 (2%)

Query: 19  EKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT 78
           E  P+VL              V VR+ A  +N ++ + I G Y  +PPLP VPG++  G 
Sbjct: 8   EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGV 67

Query: 79  VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSH 135
           V  VG  VS   VG  V      G++ +++VA      PVP       AA L +   T+ 
Sbjct: 68  VVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAW 127

Query: 136 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 195
           + L    +L  G  ++   A   VG   +Q+ K+ G   I V R  E+++ LK+LG D V
Sbjct: 128 LMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEV 187

Query: 196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP 255
           +D S E +   VKE   A    G  +  D VGG+      + L  G  ++  G  SGE  
Sbjct: 188 IDSSPEDLAQRVKE---ATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPV 244

Query: 256 VIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSPSE 313
             P ++ + K+ TV G +W    +H       +++  E++     G++T  +   +   +
Sbjct: 245 PFPRSVFIFKDITVRG-FWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLED 303

Query: 314 ANLAFSAIEDRKVIGKVMIA 333
              A +A E     GKV++ 
Sbjct: 304 FEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  163 bits (415), Expect = 4e-48
 Identities = 92/299 (30%), Positives = 146/299 (48%), Gaps = 11/299 (3%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR++V+A SLN+ + L + G Y   PP PF PG + SG V AVGP+V+   VGD V    
Sbjct: 10  VRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT 69

Query: 100 A--LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 154
              +G  A  +   +      P       A ALPV F T   A   RA L+ G+ +L+  
Sbjct: 70  GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQT 128

Query: 155 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR 214
           A GG G+ AVQ+ ++ GA I A A   +K+++LK LGV HV++   E     +      R
Sbjct: 129 ATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGR 188

Query: 215 KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF-ASGEIPVIPANIALVKNWTVHGLY 273
              GVDV+ + + G+  ++ L  L  G + + I   A    P +  ++ L  N + H + 
Sbjct: 189 ---GVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVD 244

Query: 274 WGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
                +  P  + D   E++    +G +   +S  +   +   A+  + DR+ IGKV++
Sbjct: 245 LRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  164 bits (418), Expect = 4e-48
 Identities = 111/371 (29%), Positives = 167/371 (45%), Gaps = 67/371 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V +K G P           +     P P       V ++V+A  + + +     G 
Sbjct: 4   MKAAVLKKFGQP---------LEIEEVPVPEPGPGE---VLIKVEACGVCHTDLHVAKGD 51

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--------------C---------- 96
           +   P LP +PG +  GTV  VG  V+  KVGD V              C          
Sbjct: 52  WPV-PKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN 110

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G+   G +A+++V        +P+G DL  AA L  A  T++ AL   A +  G+ 
Sbjct: 111 QKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKW 169

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           + V+GA GG+G  AVQ  K  GA +IA+ R  EK++  K LG DHV++ S+   + +VKE
Sbjct: 170 VAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE 228

Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG-FASGEIPVIPANIALVKNWT 268
                     D + D VG    + SLK L  G  ++++G    G IP++PA + ++K  +
Sbjct: 229 --------IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEIS 280

Query: 269 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 328
           + G   G+            L E L +AA+G I   I  T    E N A+  +E  KV G
Sbjct: 281 IVGSLVGTRA---------DLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRG 331

Query: 329 KVMIAFDDMKS 339
           + +I   DM S
Sbjct: 332 RAVI---DMSS 339

Length = 339

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  157 bits (399), Expect = 2e-45
 Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 48/347 (13%)

Query: 5   VCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK 64
           V  + G P V        ++L    PIP       V V+V A S+N  ++     K +  
Sbjct: 2   VYTRYGSPEV-------LLLLEVEVPIPTP-KPGEVLVKVHAASVNPVDW-----KLRRG 48

Query: 65  PPL-------PFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQ-- 112
           PP        P +PG D++G V AVG  V+ FKVGD V G       G+ A+++VA +  
Sbjct: 49  PPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESG 108

Query: 113 -FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 171
               P+G     AAALPVA  T+  AL    ++  GQ +L+ GA+GGVG  AVQI K  G
Sbjct: 109 LAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALG 168

Query: 172 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG--- 228
           A +  V       + ++SLG D V+D + E  +            +  DV++D VG    
Sbjct: 169 AHVTGVCSTR-NAELVRSLGADEVIDYTTEDFVA------LTAGGEKYDVIFDAVGNSPF 221

Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
            L + SL L   G  + V G           +  L+    +     G  +  +  + + +
Sbjct: 222 SLYRASLALKPGGRYVSVGG---------GPSGLLLVLLLLPLTLGGGGRRLKFFLAKPN 272

Query: 289 ---LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
              L +L     +G +   I   Y   +A  A+  ++  +  GKV+I
Sbjct: 273 AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  153 bits (388), Expect = 1e-43
 Identities = 97/367 (26%), Positives = 144/367 (39%), Gaps = 53/367 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN---------Y 51
           M+A      G            ++L +   IP +     V ++V A S+N         Y
Sbjct: 1   MKAWQIHSYGGIDS--------LLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGY 52

Query: 52  ANYL-----QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GS 103
              L     +           P   G D SG V  +G  V +F++GD V G       G+
Sbjct: 53  GRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGT 112

Query: 104 FAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQL----SSGQVLLVLGAA 156
            A+++V  +  V   PK      AA+LP A  T+  ALV+   L    ++G+ +L+LG +
Sbjct: 113 HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGS 172

Query: 157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
           GGVG  A+Q+ K  GA +       + I  +KSLG D V+D +NE          +  + 
Sbjct: 173 GGVGTFAIQLLKAWGAHVTTTCS-TDAIPLVKSLGADDVIDYNNEDFE------EELTER 225

Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVI-----------GFASGEIPVIPANIALVK 265
              DV+ D VGG   K +LKLL  G   + +           G   G   +  A   L K
Sbjct: 226 GKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGM--LKSAVDLLKK 283

Query: 266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 325
           N     L    Y+         +L EL      G I   I   +   E   A+  +E   
Sbjct: 284 NV-KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGH 342

Query: 326 VIGKVMI 332
             GK +I
Sbjct: 343 ARGKTVI 349

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  151 bits (384), Expect = 3e-43
 Identities = 94/314 (29%), Positives = 144/314 (45%), Gaps = 34/314 (10%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V+V+A+ +++A+     G Y ++PPLPF PG D  G VDA+G  V+ F+VGD V    
Sbjct: 30  VVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT 89

Query: 100 ALGSFAQFIVADQ---FPVPKGCDLLAAAALPV----AFGTSHVALVHRAQLSSGQVLLV 152
            +G  A++I  D     PVP+G D   A  L +    A+   H A    A++ +GQ +L+
Sbjct: 90  RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRA----AKVLTGQRVLI 145

Query: 153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 212
            GA+GGVG A +++  + GA +   A        L+ LG    +D   +  +P++     
Sbjct: 146 HGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLT--- 200

Query: 213 ARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-------PVIPANIALVK 265
                GVDV++D VGG+  +ES   L  G  ++  G  S  +        +      L K
Sbjct: 201 ---PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAK 257

Query: 266 NW-------TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF 318
                          W           +D L ELL   AKG I   I+     SE   A 
Sbjct: 258 LKLLPTGRRATFYYVWRDRAEDPKLFRQD-LTELLDLLAKGKIRPKIAKRLPLSEVAEAH 316

Query: 319 SAIEDRKVIGKVMI 332
             +E  KV+GK+++
Sbjct: 317 RLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (380), Expect = 1e-42
 Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 54/335 (16%)

Query: 29  EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTVDAVGPNVS 87
           +P P       V ++VKA  + Y + L   G +   K PL  + G +  GTV+ VG  V 
Sbjct: 20  DPEPGPGE---VLIKVKAAGVCYRDLLFWKGFFPRGKYPL--ILGHEIVGTVEEVGEGVE 74

Query: 88  NFKVGDTV---------------------C------GFAALGSFAQFIVADQ---FPVPK 117
            FK GD V                     C      G    G FA+++   +     +P 
Sbjct: 75  RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPD 134

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
                +AA      GT+  AL  RA +  G  +LV GA GGVG+ A+Q+ K  GA +IAV
Sbjct: 135 NVSDESAALAACVVGTAVHAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAV 193

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
            R  EK+K LK LG D+V+D S  S           +KL G DV+ + VG    +ESL+ 
Sbjct: 194 TRSPEKLKILKELGADYVIDGSKFSE--------DVKKLGGADVVIELVGSPTIEESLRS 245

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           LN G ++++IG  + +   +   + ++K   + G               D + E L    
Sbjct: 246 LNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIG--------SISATKAD-VEEALKLVK 296

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           +G I   I    S  + N A   ++  KV+G++++
Sbjct: 297 EGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  145 bits (368), Expect = 5e-41
 Identities = 80/224 (35%), Positives = 114/224 (50%), Gaps = 12/224 (5%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
            IP    +  V V+V A  LN  ++  I          P VPG D +G V AVG  V+ +
Sbjct: 21  EIPGP-GAGEVLVKVHAAGLNPVDWKVIAWGPPAWSY-PHVPGVDGAGVVVAVGAKVTGW 78

Query: 90  KVGDTVCGFAAL---GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQ 143
           KVGD V   A+L   GSFA++ V D     P+P       AAALP A  T++ AL  + +
Sbjct: 79  KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLR 138

Query: 144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 203
           + +G+ +L+ G AGGVG  AVQ+ K  G  +I         +++KSLG DHV+D ++E V
Sbjct: 139 IEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKR-NFEYVKSLGADHVIDYNDEDV 197

Query: 204 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVI 247
              +KE    R   GVD + D VGG+        L +   ++ I
Sbjct: 198 CERIKEITGGR---GVDAVLDTVGGETAAALAPTLAFNGHLVCI 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 3e-40
 Identities = 96/359 (26%), Positives = 145/359 (40%), Gaps = 47/359 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+  +  G   V               P P       V ++V A  +N A+ LQ  GK
Sbjct: 2   MRAVTLKGFGGVDVLK---------IGESPKPAPKR-NDVLIKVSAAGVNRADTLQRQGK 51

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           Y   P    + G + +G V+ VG +V  FK GD V      G +A++ VA +     +P+
Sbjct: 52  YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQ 111

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           G     AAA+P AF T+   L     +  GQ +L+   A GVG AA Q+ +  GA  I  
Sbjct: 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIIT 171

Query: 178 ARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
               EK+ F K L    ++     E   P VK+       KGV+++ D VGG    E+ +
Sbjct: 172 TSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGE---KGVNLVLDCVGGSYLSETAE 228

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR------ 290
           +L    + +V GF  G                V           R  ++  +LR      
Sbjct: 229 VLAVDGKWIVYGFMGGA--------------KVEKFNLLPLLRKRASIIFSTLRSRSDEY 274

Query: 291 ----------ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS 339
                     E+L +  +G I   +  TY   E   A + +E  K IGKV++  ++  S
Sbjct: 275 KADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPLS 333

Length = 334

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  142 bits (360), Expect = 2e-39
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 32/244 (13%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY 75
           +      +++    P+P+      V V+VKA +LN  ++      Y   P  P + G D+
Sbjct: 6   LTGPGGGLLVVVDVPVPKPGPDE-VLVKVKAVALNPVDWKHQ--DYGFIPSYPAILGCDF 62

Query: 76  SGTVDAVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVAD---QFPVPKGCDLLAA 124
           +GTV  VG  V+ FKVGD V GF           G+F +++VAD      +P       A
Sbjct: 63  AGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEA 122

Query: 125 AALPVAFGTSHVALVHRAQL----------SSGQVLLVLGAAGGVGVAAVQIGKVCGATI 174
           A LPV   T+ +AL  +  L          S G+ +L+ G +  VG  A+Q+ K+ G  +
Sbjct: 123 ATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKV 182

Query: 175 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 234
           I  A   +    +KSLG D V D  +    P V E ++A     +    D +    T ES
Sbjct: 183 ITTA-SPKNFDLVKSLGADAVFDYHD----PDVVEDIRAATGGKLRYALDCIS---TPES 234

Query: 235 LKLL 238
            +L 
Sbjct: 235 AQLC 238

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  139 bits (353), Expect = 1e-38
 Identities = 112/339 (33%), Positives = 162/339 (47%), Gaps = 24/339 (7%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL--QIL 58
           M A+   + G P V +  E  P      +P+P       VR+ V A  +++ +       
Sbjct: 1   MRAIRLHEFGPPEV-LVPEDVP------DPVPGPGQ---VRIAVAAAGVHFVDTQLRSGW 50

Query: 59  GKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL--GSFAQFIVADQ---F 113
           G     P LP+VPG + +G VDAVGP V    +G  V        G +A+  VAD     
Sbjct: 51  GPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLH 110

Query: 114 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT 173
           PVP G DL AA A+ V  G + + L+  A L+ G V+LV  AAGG+G   VQ+ K  GAT
Sbjct: 111 PVPDGLDLEAAVAV-VHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT 169

Query: 174 IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE 233
           ++  A G  K   +++LG D  VD +       V+E L      GV V+ D VGG + + 
Sbjct: 170 VVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGG---GVTVVLDGVGGAIGRA 226

Query: 234 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL 293
           +L LL  G + L  G+ASGE   +  + A  +  TV GL     +  R  +     R L 
Sbjct: 227 ALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGL--LGVQAERGGLRALEARALA 284

Query: 294 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             AA G +   +  T+    A  A +A+E R  +GKV++
Sbjct: 285 E-AAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLL 322

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  133 bits (338), Expect = 2e-36
 Identities = 81/300 (27%), Positives = 131/300 (43%), Gaps = 50/300 (16%)

Query: 62  QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------------- 97
                LPF  G + +G V+ VG  V   K GD V       CG                 
Sbjct: 52  ILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENAR 111

Query: 98  FAAL---GSFAQFIVADQF---PVPKGCDLLAAAALPVAFGTSHVALV-HRAQLSSGQVL 150
           F  +   G FA++++        +P+G D + AA L  A  T++ A+      L  G  +
Sbjct: 112 FPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTV 171

Query: 151 LVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           +V+G  GG+G  AVQI +    AT+IAV R  E +K  + LG DHV++    +    V+E
Sbjct: 172 VVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN----ASDDVVEE 226

Query: 210 FLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 268
             +    +G D + D VG   T   + KLL  G + +++G+  G    +P +  +    +
Sbjct: 227 VRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYG-GHGR-LPTSDLVPTEIS 284

Query: 269 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 328
           V G  WG+            L E++  A  G + + I+  +   +AN A   + + +V G
Sbjct: 285 VIGSLWGTRA---------ELVEVVALAESGKVKVEIT-KFPLEDANEALDRLREGRVTG 334

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 3e-36
 Identities = 92/347 (26%), Positives = 147/347 (42%), Gaps = 53/347 (15%)

Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K    + +    P+      V ++V    L Y + LQ+ G Y  +   P + G +  GTV
Sbjct: 10  KQGYRIEEVP-DPKPGKDEVV-IKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHEVVGTV 66

Query: 80  DAVGPNVSNFKVGDTV-------------C--GFAAL------------GSFAQFIVADQ 112
           + VG NV  FK GD V             C  G  A             G FA++     
Sbjct: 67  EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKV 126

Query: 113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 169
                VP       A  +P   G  +  L  RA +  G+ +LV GA GGVG+ A+Q+ K 
Sbjct: 127 TSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRAGVKKGETVLVTGAGGGVGIHAIQVAKA 185

Query: 170 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 229
            GA +IAV     K K +     D+V+  S  S     +E    +K+ G D++ + VG  
Sbjct: 186 LGAKVIAVTSSESKAKIVSKYA-DYVIVGSKFS-----EE---VKKIGGADIVIETVGTP 236

Query: 230 LTKESLKLLNWGAQILVIG-FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
             +ESL+ LN G +I+ IG         +     ++K+  + G    + +      +E++
Sbjct: 237 TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRD-----VEEA 291

Query: 289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 335
           L+ +    A+G I   I    S SE + A   ++D+  IGK+++   
Sbjct: 292 LKLV----AEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKPS 334

Length = 334

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  132 bits (335), Expect = 6e-36
 Identities = 100/365 (27%), Positives = 160/365 (43%), Gaps = 55/365 (15%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  + G+    + D           P+P+      V V+++A+ + + +    LG 
Sbjct: 1   MKAAVVEEFGEKPYEVKDV----------PVPE-PGPGEVLVKLEASGVCHTDLHAALGD 49

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC-- 96
           +  KP LP + G + +G V AVGP VS  KVGD                      T+C  
Sbjct: 50  WPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN 109

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G+   G+FA++ +AD     P+P G     AA L  A  T + AL  +A L  G  
Sbjct: 110 QKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK-KAGLKPGDW 168

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           +++ GA GG+G   VQ  K  G  +IA+  G EK++  K LG D  VD      + +VKE
Sbjct: 169 VVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKE 228

Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
                    V V    V     +++L  L  G  ++ +G   G    +     +++  T+
Sbjct: 229 LTGGGGAHAVVVT--AVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITI 286

Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
            G   G+         +D L+E L +AA+G +  HI       + N  F  +E+ K+ G+
Sbjct: 287 VGSLVGT--------RQD-LQEALEFAARGKVKPHIQ-VVPLEDLNEVFEKMEEGKIAGR 336

Query: 330 VMIAF 334
           V++ F
Sbjct: 337 VVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  131 bits (331), Expect = 1e-35
 Identities = 101/340 (29%), Positives = 141/340 (41%), Gaps = 23/340 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A V  + GDP           VL   E P P   +   V VR   + ++  +   I G
Sbjct: 1   MRAAVHTQFGDPAD---------VLEIGEVPKPTPGAGE-VLVRTTLSPIHNHDLWTIRG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
            Y  KP LP + GS+  G VDAVG  V   +VG  V      G++A++ VA      P+P
Sbjct: 51  TYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLP 110

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
            G     AA L +A   S + L+    +  GQ L+   A G VG     +    G  +I 
Sbjct: 111 DGISDEVAAQL-IAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVIN 169

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           + R    +  L++LG+  VV          V+E      +    V  D VGGKL  E L 
Sbjct: 170 LVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPIS---VALDSVGGKLAGELLS 226

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR---ELL 293
           LL  G  ++  G  SGE   I +   + K  TV G  WG        V E   R   ELL
Sbjct: 227 LLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF-WGGRWSQEMSV-EYRKRMIAELL 284

Query: 294 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 333
             A KG + + +   +   +A  A +A       GKV++ 
Sbjct: 285 TLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  129 bits (327), Expect = 6e-35
 Identities = 84/263 (31%), Positives = 125/263 (47%), Gaps = 34/263 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVK-----ATSLNYANY 54
              LV  +L        + +    +     P+P       V V+ +     A+ +N+   
Sbjct: 2   FRKLVVHRLS------PNFREATSIVDVPVPLP---GPGEVLVKNRFVGINASDINFTA- 51

Query: 55  LQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-- 112
               G+Y      PF  G +  G V AVG  V++FKVGD V    + G+FA++ V     
Sbjct: 52  ----GRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAV-ATMSFGAFAEYQVVPARH 106

Query: 113 -FPVPKGCDLLAAAALP--VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 169
             PVP+    L    LP  V+  T+ +AL    ++ SG+ +LV  AAGG G  AVQ+ K+
Sbjct: 107 AVPVPE----LKPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL 162

Query: 170 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 229
            G  +I      EK +FLKSLG D  ++   E     + E LK    KGVDV+Y+ VGG+
Sbjct: 163 AGCHVIGTCSSDEKAEFLKSLGCDRPINYKTE----DLGEVLKKEYPKGVDVVYESVGGE 218

Query: 230 LTKESLKLLNWGAQILVIGFASG 252
           +    +  L    +++VIGF SG
Sbjct: 219 MFDTCVDNLALKGRLIVIGFISG 241

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  123 bits (312), Expect = 1e-32
 Identities = 97/352 (27%), Positives = 145/352 (41%), Gaps = 29/352 (8%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            +ALV  + G+P           VL  ++  IP       V V++ A  +N A+  QI G
Sbjct: 1   AKALVYTEHGEP---------KEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQG 51

Query: 60  KYQEKPP----LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQ-- 112
            Y  KPP     P V G++  G V  VG  V + K GD V      LG++    V     
Sbjct: 52  VYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD 111

Query: 113 -FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 171
              VP   D   AA L V   T++  L    +L  G  ++  GA   VG A +Q+ K+ G
Sbjct: 112 LIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLG 171

Query: 172 ATIIAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
              I V R    +    + LK+LG DHV+    E       E LK+       +  + VG
Sbjct: 172 IKTINVVRDRPDLEELKERLKALGADHVLT-EEELRSLLATELLKSAPGGRPKLALNCVG 230

Query: 228 GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVL 285
           GK   E  +LL+ G  ++  G  SG+   +P ++ + K+ T+ G +W +   K   P   
Sbjct: 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRG-FWLTRWLKRANPEEK 289

Query: 286 EDSLRELLLWAAKGLI---TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
           ED L EL     +G +    +         E   A +        GK ++  
Sbjct: 290 EDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  123 bits (310), Expect = 2e-32
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 55/282 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+ALV  K G   + + D K P                 V +RVK   +N  +Y  I   
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPG-----------EVLIRVKMAGVNPVDYNVI-NA 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---------------------C--- 96
            + KP +P +PG++++G V+ VG +V   K GD V                     C   
Sbjct: 49  VKVKP-MPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNG 107

Query: 97  ---GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL 150
              G  + G +A++IV  +   F +P       AA+LPVA  T++ AL   A L  G+ +
Sbjct: 108 GIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGLGPGETV 166

Query: 151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 210
           +V GA+G  G+ AVQ+ K+ GA +IAV+R      +LK  G D VVD     V   VKE 
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLKEFGADEVVDYDE--VEEKVKEI 220

Query: 211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
            K       DV+ + +G      SL +L  G +++  G  +G
Sbjct: 221 TKM-----ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG 257

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  121 bits (305), Expect = 1e-31
 Identities = 95/351 (27%), Positives = 148/351 (42%), Gaps = 58/351 (16%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYLQILGKYQEKPPLPFV 70
            H     +++ +  P+P+      V V+VKA     + L+      + G       LP  
Sbjct: 6   FHKGSKGLLVLEEVPVPEP-GPGEVLVKVKAAGVCHSDLHI-----LDGGVPTLTKLPLT 59

Query: 71  PGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---------------------------GS 103
            G + +GTV  VG  V+NFKVGD V   A +                           G 
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 104 FAQFIVADQF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVG 160
           FA++IV       PVP G     AA    A  T + A+V   ++  G+ +LV+G  GG+G
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGL-GGLG 178

Query: 161 VAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 220
           + AVQI K  GA +IAV    EK++  K LG D V++  ++S        L      G D
Sbjct: 179 LNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG----GGFD 234

Query: 221 VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI 279
           V++D VG + T E   K +  G +I+V+G    ++  +  +  + +   + G + G+   
Sbjct: 235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLT-VDLSDLIARELRIIGSFGGTP-- 291

Query: 280 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 330
                  + L E+L   AKG +      T    E       +   KV G+V
Sbjct: 292 -------EDLPEVLDLIAKGKLDP-QVETRPLDEIPEVLERLHKGKVKGRV 334

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (299), Expect = 1e-30
 Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 41/243 (16%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGD---------------------TVC------G 97
             LP VPG +++G V  VG +VS ++VGD                      VC      G
Sbjct: 52  VTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG 111

Query: 98  FAALGSFAQFIVADQF-----PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
           F   GSFA+++   +       +P   D + AA L   F T+  ALVH+A++  G+ + V
Sbjct: 112 FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAV 171

Query: 153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFL 211
            G  GGVG++AV I    GA +IAV    +K++  + LG    V+ S  E V  +V++  
Sbjct: 172 HG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230

Query: 212 KARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGE--IPVIPANIALVKNWT 268
                 G  V  D +G   T + S+  L    + + +G   GE     +P +  + +   
Sbjct: 231 G----GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELE 286

Query: 269 VHG 271
           + G
Sbjct: 287 IVG 289

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  118 bits (297), Expect = 1e-30
 Identities = 82/325 (25%), Positives = 130/325 (40%), Gaps = 53/325 (16%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++++A  + + +     G +      P VPG +  G V  VG  V   KVGD V    
Sbjct: 27  VLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGW 85

Query: 96  ------------------------CGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP 128
                                    G+   G +A+++VAD      +P G  L  AA L 
Sbjct: 86  LVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLL 145

Query: 129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 188
            A  T + AL   A    G+ + VLG  GG+G  AVQ  +  G   +A+ R  +K +  +
Sbjct: 146 CAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR 203

Query: 189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV-GGKLTKESLKLLNWGAQILVI 247
            LG D VVD        S  E  +     G DV+   V  G   + +L  L  G +I+++
Sbjct: 204 KLGADEVVD--------SGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLV 255

Query: 248 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 307
           G              ++K  ++ G   G             L+E L +AA+G +   I  
Sbjct: 256 GLPESPPFSPDIFPLIMKRQSIAGSTHGGRA---------DLQEALDFAAEGKVKPMI-E 305

Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
           T+   +AN A+  +E   V  + ++
Sbjct: 306 TFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  114 bits (288), Expect = 3e-29
 Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 38/287 (13%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTVC--------------GFAALGS-----FAQFI 108
           P + G+D  G V AVG  V   ++G+ V                   +GS     FA++ 
Sbjct: 78  PRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYT 137

Query: 109 V---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 165
           V    + +PV      +  A  P ++ T+   L  RA + +G+ +LV GA+GGVG A VQ
Sbjct: 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQ 196

Query: 166 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 225
           + K  GA +IAVA GA K + +++LG D V+      +  +     KA   + VDV+ D 
Sbjct: 197 LAKRRGAIVIAVA-GAAKEEAVRALGADTVILRDAPLLADA-----KALGGEPVDVVADV 250

Query: 226 VGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 285
           VGG L  + L+LL  G + +  G  +G +  +      +K+ T+ G   G+       V 
Sbjct: 251 VGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT-----REV- 304

Query: 286 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
               R L+ +  +G I   ++ T+  SE   A +   +++ +GK+++
Sbjct: 305 ---FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVL 348

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  113 bits (285), Expect = 1e-28
 Identities = 99/354 (27%), Positives = 152/354 (42%), Gaps = 76/354 (21%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN---FKVGDTV- 95
           + +RV A  + +++ L +L K +   P PFV G + SG V  VGPNV N     VGD V 
Sbjct: 28  ILIRVAACGVCHSD-LHVL-KGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVV 85

Query: 96  ------CG---------------FAA---------------------------LGSFAQF 107
                 CG               F A                           +G  A++
Sbjct: 86  GSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEY 145

Query: 108 IVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 164
            V       P+P+  D   +A L  A  T++ AL H A +  G+ + V+G  GGVG +A+
Sbjct: 146 AVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAI 204

Query: 165 QIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
           Q+ K  GA  IIAV    EK+   K LG  H V+ + E  + +++E    R   GVDV+ 
Sbjct: 205 QLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGR---GVDVVV 261

Query: 224 DPVGGKLT-KESLKLLNWGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYKIH 280
           + +G   T K +L ++  G + +V+G A G      IP    + +   + G Y       
Sbjct: 262 EALGKPETFKLALDVVRDGGRAVVVGLAPGGATAE-IPITRLVRRGIKIIGSYGA----- 315

Query: 281 RPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           RP      L EL+  AA G +     ++H Y   E N A+  +    + G+ ++
Sbjct: 316 RPRQ---DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIV 366

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  110 bits (277), Expect = 1e-27
 Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 24/194 (12%)

Query: 42  VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--CG-F 98
           VRV+A S+N  +  ++       P  P + G D SG V+AVG  V+ FKVGD V   G  
Sbjct: 35  VRVEAVSVNPVDT-KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI 93

Query: 99  AALGSFAQF------IVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SG 147
              GS A++      IV      PK      AAALP+   T+  AL  R  +S      G
Sbjct: 94  TRPGSNAEYQLVDERIVG---HKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEG 150

Query: 148 QVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 206
           + LL++G AGGVG  A+Q+ K + G T+IA A   E I ++K LG DHV++         
Sbjct: 151 KTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-----D 205

Query: 207 VKEFLKARKLKGVD 220
           + E L+A  ++ VD
Sbjct: 206 LAEQLEALGIEPVD 219

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  108 bits (273), Expect = 4e-27
 Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 26/260 (10%)

Query: 87  SNFKVGDTVCGFAALGSFAQFIVADQ----FPVPKGCDLLAAAALPVAFG----TSHVAL 138
            +FKVGD V GF     + ++ V D       +     L  +A L V  G    T++  L
Sbjct: 82  PDFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGV-LGMTGLTAYFGL 137

Query: 139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVD 197
               +   G+ ++V  AAG VG    QI K+ GA ++ +A   EK ++L   LG D  ++
Sbjct: 138 TEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAIN 197

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG---EI 254
                  P + E LK     G+DV +D VGG++   +L LLN G +I + G  S      
Sbjct: 198 YKT----PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATE 253

Query: 255 PVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS 312
           P  P N+   + K  T+ G     Y    P    ++L EL  W A+G +           
Sbjct: 254 PPGPKNLGNIITKRLTMQGFIVSDYADRFP----EALAELAKWLAEGKLKYREDVVEGLE 309

Query: 313 EANLAFSAIEDRKVIGKVMI 332
            A  AF  +   K  GK+++
Sbjct: 310 NAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  105 bits (263), Expect = 8e-26
 Identities = 75/252 (29%), Positives = 102/252 (40%), Gaps = 30/252 (11%)

Query: 68  PFVPGSDYSGTVDAVG--PNVSNFKVGDTVCGF-----AALGSFAQFIVADQFPVPKGCD 120
           P   G    G   A     N   F+ GD V G       A+         D  P P    
Sbjct: 68  PVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAP---- 123

Query: 121 LLAAAALPVAFGTS---HVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
              +A L V        +  L+   Q  +G+ ++V  AAG VG    QI K+ G  ++ +
Sbjct: 124 --LSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGI 181

Query: 178 ARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           A GAEK  FL   LG D  +D   E       + LK    KG+DV ++ VGG++    L 
Sbjct: 182 AGGAEKCDFLTEELGFDAGIDYKAE----DFAQALKEACPKGIDVYFENVGGEVLDAVLP 237

Query: 237 LLNWGAQILVIGFASG----EIPVIPANI--ALVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
           LLN  A+I V G  S     E+P  P  +   + K   V G    S    R     ++LR
Sbjct: 238 LLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP---EALR 294

Query: 291 ELLLWAAKGLIT 302
           EL  W  +G I 
Sbjct: 295 ELGGWVKEGKIQ 306

Length = 340

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  104 bits (262), Expect = 1e-25
 Identities = 96/343 (27%), Positives = 149/343 (43%), Gaps = 57/343 (16%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+      V V+VKA  +  ++  + LG     PPL  V G ++SGTV+ VG  V + 
Sbjct: 18  PKPEPGPG-EVLVKVKACGICGSDIPRYLGTGAYHPPL--VLGHEFSGTVEEVGSGVDDL 74

Query: 90  KVGDTVCGFAAL---------------------------GSFAQFI---VADQFPVPKGC 119
            VGD V     L                           G+FA+++     +   +P   
Sbjct: 75  AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHV 134

Query: 120 DLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-II 175
           D   AA + P A     VAL  V  A ++ G  ++V+G AG +G+ A+Q  K+ GA  +I
Sbjct: 135 DYEEAAMIEPAA-----VALHAVRLAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVI 188

Query: 176 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-S 234
           AV    EK+   + LG D  ++   E  +  V+E  + R   G D++ +  G   T E +
Sbjct: 189 AVDIDDEKLAVARELGADDTIN-PKEEDVEKVRELTEGR---GADLVIEAAGSPATIEQA 244

Query: 235 LKLLNWGAQILVIGFASGE--IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 292
           L L   G +++++G   G+  +        L K  T+ G  W SY    P    D  R  
Sbjct: 245 LALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQG-SWNSYSAPFPG---DEWRTA 300

Query: 293 LLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI-GKVMI 332
           L   A G I +   I+H     +   AF  + DR+   GKV++
Sbjct: 301 LDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  100 bits (252), Expect = 2e-24
 Identities = 93/306 (30%), Positives = 136/306 (44%), Gaps = 29/306 (9%)

Query: 29  EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
           +P P  + +    VRV A SLN       L    E+P    VPG D +G V+    + S 
Sbjct: 21  DPQPAPHEAL---VRVAAISLNRGE----LKFAAERPD-GAVPGWDAAGVVERAAADGSG 72

Query: 89  FKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
             VG  V G  A+G++A+ +         +P G     AA LPVA G + +  + R    
Sbjct: 73  PAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVA-GVTALRALRRGGPL 131

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVI 204
            G+ +LV GA+GGVG  AVQ+  + GA ++AV     + + L+ LG   VV   S  S  
Sbjct: 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSELSGA 191

Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALV 264
           P             VD++ D VGG     +L+LL  G  ++ +G +SGE  V     A V
Sbjct: 192 P-------------VDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPA-AFV 237

Query: 265 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR 324
                  LY  ++ ++    L   L  LL   A G +   I    S +E + A  A+  R
Sbjct: 238 GGGGGRRLY--TFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLAR 295

Query: 325 KVIGKV 330
           +  GK 
Sbjct: 296 RFRGKA 301

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  100 bits (252), Expect = 3e-24
 Identities = 92/349 (26%), Positives = 144/349 (41%), Gaps = 47/349 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+V          I     P VL   E PIP+      V +RVKA  LN +      G
Sbjct: 1   MKAIV----------IEQPGGPEVLKLREIPIPEPKPGW-VLIRVKAFGLNRSEIFTRQG 49

Query: 60  KYQEKPPLPF--VPGSDYSGTVDAVGPNVSNFKVGDTVC------GFAALGSFAQFIV-- 109
                P + F  V G +  G V+        F  G  V       G    GS+A++ +  
Sbjct: 50  ---HSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVP 104

Query: 110 ADQ-FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
            +Q + +         AALP  + T+  +L     L  G  LL+ G    VG+AA+++ K
Sbjct: 105 NEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAK 164

Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
             GAT+ A  R  E+   LK LG D VV + + ++   ++         G D + + VG 
Sbjct: 165 ALGATVTATTRSPERAALLKELGADEVV-IDDGAIAEQLRA-----APGGFDKVLELVGT 218

Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIP-----ANIALVKNWTVHGLYWGSYKIHRPH 283
              K+SL+ L  G  + + G   G+   +       +I    N T+ G   G        
Sbjct: 219 ATLKDSLRHLRPGGIVCMTGLLGGQ-WTLEDFNPMDDIPSGVNLTLTGSSSGD------- 270

Query: 284 VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           V +  L+EL  + A G + I  S  ++  E   A + +E  +  GKV++
Sbjct: 271 VPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 99.0 bits (247), Expect = 2e-23
 Identities = 88/337 (26%), Positives = 140/337 (41%), Gaps = 56/337 (16%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V +RV AT +  ++     G     PP   + G ++ G V  VG  V  FKVGD V    
Sbjct: 28  VLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEP 86

Query: 97  ------------------------GFAAL-----GSFAQFIVADQ----FPVPKGCDLLA 123
                                   G+A L     G FA+++          +P G D   
Sbjct: 87  NIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDE-E 145

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAE 182
           AAAL     T++     RA +  G  ++V+GA G +G+ A+ + K+ GA+ +I V R  E
Sbjct: 146 AAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPE 204

Query: 183 KIKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNW 240
           +++   ++ G D VV+ S +     + E    R   G DV+ + VG      ++L+ L  
Sbjct: 205 RLELAKEAGGADVVVNPSEDDAGAEILELTGGR---GADVVIEAVGSPPALDQALEALRP 261

Query: 241 GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 300
           G  ++V+G   GE   +PA + + K  T+ G    S +      L+          A G 
Sbjct: 262 GGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALD--------LLASGK 313

Query: 301 ITI--HISHTYSPSEANLAFSAIEDRK-VIGKVMIAF 334
           I     I+H     +A  A+    DRK    KV++  
Sbjct: 314 IDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 104/374 (27%), Positives = 162/374 (43%), Gaps = 77/374 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYL 55
           M+ALVC K G   + + D   P V    E          V VRVK      + L+  +  
Sbjct: 1   MKALVCEKPGR--LEVVDIPEP-VPGAGE----------VLVRVKRVGICGSDLHIYHGR 47

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG--FAAL----- 101
                Y      P + G + SG V  VG  V+  KVGD V       CG  +A       
Sbjct: 48  NPFASY------PRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPN 101

Query: 102 -------------GSFAQFIV--ADQFPVPKGCDLLAAAAL-PVAFGTSHVALVHRAQLS 145
                        G FA++IV  AD   VP+G  L  AA + P+A G  H   V RA ++
Sbjct: 102 CCENLQVLGVHRDGGFAEYIVVPADALLVPEGLSLDQAALVEPLAIGA-HA--VRRAGVT 158

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G  +LV+GA G +G+  +Q+ K  GA +I V    E+++F + LG D  +++ +E V  
Sbjct: 159 AGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAA 217

Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALV 264
            ++E        G DV+ D  G   + +E+++L+  G +++++G + G +   P      
Sbjct: 218 RLRELTDGE---GADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV-TFPDPEFHK 273

Query: 265 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIE 322
           K  T+ G         R    ED   +++     G +     I+H +   +   AF   E
Sbjct: 274 KELTILG--------SRNATRED-FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWE 324

Query: 323 D--RKVIGKVMIAF 334
                VI KV+I F
Sbjct: 325 APPGGVI-KVLIEF 337

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 95.7 bits (239), Expect = 2e-22
 Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 15/255 (5%)

Query: 30  PIPQLNSSTA----VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN 85
            +P+          V ++V+A  +N ++   + G+Y     LP  PG + SGTV A G  
Sbjct: 19  SLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGG 78

Query: 86  -VSNFKVGDTVCGFAAL-GSFAQFIVADQF---PVPKGCDLLAAAALPVAFGTSHVALVH 140
            ++   +G  V   A   G++A++ VAD     P+P G      A+  V   T+ + ++ 
Sbjct: 79  PLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTA-LGMLE 137

Query: 141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN 200
            A+    + ++   AA  +G   V++ K  G  +I + R  E++  LK +G ++V++ S+
Sbjct: 138 TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSD 197

Query: 201 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-EIPVIPA 259
              +  +KE +         + +D VGG LT + L  + +G+ + V G+ SG     I  
Sbjct: 198 PDFLEDLKELIAKLNAT---IFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDP 254

Query: 260 NIALVKNWTVHGLYW 274
              + KN ++ G +W
Sbjct: 255 VDLIFKNKSIEG-FW 268

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 96.1 bits (240), Expect = 2e-22
 Identities = 95/382 (24%), Positives = 154/382 (40%), Gaps = 79/382 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A V  ++G P + I +    + L   +P P       V VR+ A  L +++   + G 
Sbjct: 1   MRAAVLHEVGKP-LEIEE----VELD--DPGP-----GEVLVRIAAAGLCHSDLHVVTGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------------- 97
                PLP V G + +G V+ VGP V+  K GD V       CG                
Sbjct: 49  L--PAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLG 106

Query: 98  ------------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA 130
                                      LG+FA++ V  +     +     L  AA L   
Sbjct: 107 AGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCG 166

Query: 131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS 189
             T   A+V+ A++  G  + V+G  GGVG+ A+Q  ++ GA  IIAV    EK++  + 
Sbjct: 167 VTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARR 225

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIG 248
            G  H V+ S +  + +V++    R   G D  ++ VG     +++L +   G   +V+G
Sbjct: 226 FGATHTVNASEDDAVEAVRDLTDGR---GADYAFEAVGRAATIRQALAMTRKGGTAVVVG 282

Query: 249 FASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--I 305
                  V +PA    +    + G  +GS    R     D  R L L+ A G + +   +
Sbjct: 283 MGPPGETVSLPALELFLSEKRLQGSLYGSANPRR-----DIPRLLDLYRA-GRLKLDELV 336

Query: 306 SHTYSPSEANLAFSAIEDRKVI 327
           +  YS  E N AF+ +   +  
Sbjct: 337 TRRYSLDEINEAFADMLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 96.7 bits (241), Expect = 2e-22
 Identities = 76/266 (28%), Positives = 108/266 (40%), Gaps = 56/266 (21%)

Query: 1   MEALVCR--KLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           M A   R  + GDP  +I  E    V     P+P+L     V V V A  +NY N    L
Sbjct: 13  MYAFAIRPERYGDPAQAIQLE---DV-----PVPELGPGE-VLVAVMAAGVNYNNVWAAL 63

Query: 59  GK--------YQEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV---CG--------- 97
           G+         +     P+ + GSD SG V AVG  V N+KVGD V   C          
Sbjct: 64  GEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPER 123

Query: 98  ------FAA----------LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVAL 138
                 F             GSFAQF +       P PK      AAA  +   T++  L
Sbjct: 124 AGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRML 183

Query: 139 VHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 196
                  +  G  +L+ GA+GG+G  A+Q+ +  GA  +AV    EK ++ ++LG + V+
Sbjct: 184 FGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI 243

Query: 197 DLSNES---VIPSVKEFLKARKLKGV 219
           +  +     V+P V         K  
Sbjct: 244 NRRDFDHWGVLPDVNSEAYTAWTKEA 269

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 96.4 bits (240), Expect = 2e-22
 Identities = 74/242 (30%), Positives = 102/242 (42%), Gaps = 54/242 (22%)

Query: 1   MEALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           M A   R+   GDP  +I  E  P+        P+L     + V V A  +NY N    L
Sbjct: 8   MYAFAIREERDGDPRQAIQLEVVPV--------PELGPGEVL-VAVMAAGVNYNNVWAAL 58

Query: 59  G---------KYQEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV---C--------- 96
           G         +   K  LPF + GSD SG V  VGP V+ +KVGD V   C         
Sbjct: 59  GEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPD 118

Query: 97  ---------------GF-AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVA 137
                          G+    GSFA+F +       P PK      AA   +   T++  
Sbjct: 119 GRDGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQ 178

Query: 138 LVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 195
           LV    A +  G  +L+ GAAGG+G  A Q+ +  G   +AV    EK ++ +SLG + V
Sbjct: 179 LVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAV 238

Query: 196 VD 197
           +D
Sbjct: 239 ID 240

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 94.9 bits (237), Expect = 3e-22
 Identities = 74/225 (32%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V +RV  +SLNY + L   G        P  PG D +GTV +       F+ GD V    
Sbjct: 30  VLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSSD--DPRFREGDEVLVTG 87

Query: 96  CGFAAL--GSFAQFIV--ADQ-FPVPKGCDLLAAAALPVA-F--GTSHVALVHRAQLSSG 147
                   G FA+++   AD   P+P+G  L  A  L  A F    S   L    Q    
Sbjct: 88  YDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPED 147

Query: 148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 207
             +LV GA GGVG  AV I    G T++A+    E+  +LKSLG   V+D   + +  S 
Sbjct: 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDR-EDLLDESK 206

Query: 208 KEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
           K  LKAR    +D     VGG +    LK   +G  +   G A+G
Sbjct: 207 KPLLKARWAGAIDT----VGGDVLANLLKQTKYGGVVASCGNAAG 247

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 93.4 bits (233), Expect = 1e-21
 Identities = 82/347 (23%), Positives = 129/347 (37%), Gaps = 94/347 (27%)

Query: 40  VRVRVKA-----TSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDT 94
           V ++V A     T L+        G++   PPL  VPG +++G V AVG  V+ FKVGD 
Sbjct: 27  VLIKVAACGICGTDLHIYE-----GEFGAAPPL--VPGHEFAGVVVAVGSKVTGFKVGDR 79

Query: 95  V-------CG---------------FAALGS-----FAQFIVADQ---FPVPKGCDLLAA 124
           V       CG                 A+G      FA+++V      + +P       A
Sbjct: 80  VAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEA 139

Query: 125 AAL-PVAFGTSHVALVH---RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVAR 179
           A   P++        VH      +  G  +LV G AG +G+   Q+ K+ GA  +     
Sbjct: 140 ALAEPLS------CAVHGLDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEP 192

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLL 238
             EK++  K LG    VD S E          K     G DV+ +  G  K  +++++  
Sbjct: 193 NEEKLELAKKLGATETVDPSREDPEA-----QKEDNPYGFDVVIEATGVPKTLEQAIEYA 247

Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-----------PHVLED 287
             G  +LV G       V   + A V            ++I +           P+    
Sbjct: 248 RRGGTVLVFG-------VYAPD-ARVS--------ISPFEIFQKELTIIGSFINPYTFPR 291

Query: 288 SLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           ++  LL     G I +   +SH     E   A   +     + KV++
Sbjct: 292 AI-ALL---ESGKIDVKGLVSHRLPLEEVPEALEGMRSGGAL-KVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 35/238 (14%)

Query: 17  HDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLN------YANYLQILGKYQEKPPLPF 69
            +  SP+ ++  + P+P       + V+V A +LN      Y +Y     K +EK     
Sbjct: 7   KNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEK----- 60

Query: 70  VPGSDYSGTVDAVGPNV-SNFKVGDTVCG-----FAALGSFAQFIVADQF-------PVP 116
             G DYSG +  VG NV S +KVGD VCG     +   G+ +Q+++ D           P
Sbjct: 61  GLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKP 120

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGA--T 173
           +   L  AAA P+  GT++  L    Q L     +LVLG +  VG  A+Q+ K      T
Sbjct: 121 ENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGT 180

Query: 174 IIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG-VDVLYDPVGG 228
           ++     R AE  K    LG DH +D    S +  +K  L+  K +G  D++ D VGG
Sbjct: 181 VVGTCSSRSAELNKK---LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGG 235

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 91.0 bits (226), Expect = 1e-20
 Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 13/172 (7%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           + V VKA S+N  +  ++  +   +   P + G D +G V AVG  V+ FK GD V    
Sbjct: 32  LLVEVKAISVNPVDT-KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG 90

Query: 100 AL---GSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQ 148
            +   GS A+F + D+  V   PK      AAALP+   T+   L  R  ++       +
Sbjct: 91  DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR 150

Query: 149 VLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
            LL++G AGGVG   +Q+ + + G T+IA A   E  +++  LG  HV+D S
Sbjct: 151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHS 202

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 86/387 (22%), Positives = 145/387 (37%), Gaps = 93/387 (24%)

Query: 3   ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ 62
           A V  + G P V    E +P         P+   +  VR+++ ATS+ + + L I G   
Sbjct: 5   AAVAWEAGKPLVIEEIEVAP---------PK---ANEVRIKMLATSVCHTDILAIEGFKA 52

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG------------------ 97
                P + G + +G V++VG  V+N K GD V       CG                  
Sbjct: 53  --TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRA 110

Query: 98  ----------------------FAALGSFAQFIVADQ---------FPVPKGCDLLAAAA 126
                                 F    +F+Q+ V D+          P+   C       
Sbjct: 111 NESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVC------L 164

Query: 127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIK 185
           L   F T + A  + A++  G  + V G  G VG++A+   K+ GA+ II V    +K +
Sbjct: 165 LGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFE 223

Query: 186 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLK--LLNWGA 242
             K  G    ++  +      V E ++     GVD  ++  G   L  E+L+   L WG 
Sbjct: 224 KAKEFGATDFINPKDSD--KPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGV 281

Query: 243 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGL 300
            ++V      E+ + P    L+   T  G ++G +K     P ++   + +      K  
Sbjct: 282 SVVVGVPPGAELSIRPFQ--LILGRTWKGSFFGGFKSRSDVPKLVSKYMNK------KFD 333

Query: 301 ITIHISHTYSPSEANLAFSAIEDRKVI 327
           +   I+H     E N  F  ++  + I
Sbjct: 334 LDELITHVLPFEEINKGFDLMKSGECI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 88.4 bits (220), Expect = 8e-20
 Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 47/300 (15%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGF------------AAL- 101
             LP V G +  G V AVGP+ ++ KVGD V          C               AL 
Sbjct: 64  VKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALG 123

Query: 102 ----GSFAQF-IVADQFPV--PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 154
               G +A++ IV     +  P G D   AA L  +  T++ A V +         +V+ 
Sbjct: 124 IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSA-VKKLMPLVADEPVVII 182

Query: 155 AAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 213
            AGG+G+ A+ + K +  A II V     K++  K+ G D VV+ S+     + K  +KA
Sbjct: 183 GAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD---AAKRIIKA 239

Query: 214 RKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL 272
               GVD + D V    T   +  +L  G +++++G   GE  +    + L +  T+ G 
Sbjct: 240 AG-GGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPL-RALTIQGS 297

Query: 273 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           Y GS        LE+ LREL+  A  G +          S+ N A   ++  KV+G+ ++
Sbjct: 298 YVGS--------LEE-LRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 88.4 bits (220), Expect = 8e-20
 Identities = 96/361 (26%), Positives = 152/361 (42%), Gaps = 69/361 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V  K G        E++P+ L++  P+P+      V ++V+A  +   +   + G 
Sbjct: 1   MKAMVLEKPG------PIEENPLRLTEV-PVPEPGPGE-VLIKVEACGVCRTDLHIVEGD 52

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C-- 96
               P LP +PG +  G V+AVGP V+ F VGD V                      C  
Sbjct: 53  LPP-PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDN 111

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G+   G +A+++VAD+   +P+P+  D   AA L  A    + AL   A L  GQ 
Sbjct: 112 ARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQR 170

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           L + G  G     A+QI +  GA + A  R  E  +  + LG D   D S++        
Sbjct: 171 LGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGD-SDD-------- 220

Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
            L    L    +++ PV G L   +L+ +  G ++++ G    +IP              
Sbjct: 221 -LPPEPLDAA-IIFAPV-GALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE--------- 268

Query: 270 HGLYWGSYKIHRPHVL--EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
             L WG   I     L  +D   E L  AA+  I   +  TY   EAN A   +++ ++ 
Sbjct: 269 --LLWGEKTIRSVANLTRQD-GEEFLKLAAEIPIKPEV-ETYPLEEANEALQDLKEGRIR 324

Query: 328 G 328
           G
Sbjct: 325 G 325

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 87.0 bits (216), Expect = 2e-19
 Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 46/276 (16%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++V A  +  ++     G Y +    P V G ++SGT+  VGP+V  +KVGD V    
Sbjct: 29  VLIKVAAAGICGSDLHIYKGDY-DPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSET 87

Query: 96  ----CGFAAL--------------------GSFAQFIVADQ---FPVPKGCDLLAAAAL- 127
               CG                        G FA++++  +     +P+   L AAA   
Sbjct: 88  TFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAALTE 147

Query: 128 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF- 186
           P+A   +  A+  R+ +  G  ++V G  G +G+ A Q+ K+ GAT++ V    ++++  
Sbjct: 148 PLA--VAVHAVAERSGIRPGDTVVVFGP-GPIGLLAAQVAKLQGATVVVVGTEKDEVRLD 204

Query: 187 -LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQI 244
             K LG D  V+   E +    +   +     G DV+ +  G     +++L+LL  G +I
Sbjct: 205 VAKELGADA-VNGGEEDL---AELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRI 260

Query: 245 LVIGFASGEIPVIPANIALVKNWTVHGLY---WGSY 277
           + +G        I     + K  +V G       S+
Sbjct: 261 VQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASW 296

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 60/344 (17%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P+P+      V V+V+A  +   +  +I G +      P + G + +G +  VG  V+ F
Sbjct: 18  PVPEPGPG-EVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF 75

Query: 90  KVGD---------------------TVC------GFAALGSFAQFIVADQFPVPKGCDL- 121
           KVGD                      +C      G    G FA+++    + V +G  L 
Sbjct: 76  KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLK 135

Query: 122 --------LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA- 172
                    AA   P+A     +    +A +  G  +LV+G AG +G+    + K  GA 
Sbjct: 136 LPDNVSFEEAALVEPLA---CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKASGAR 191

Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLT 231
            +I       +++F K LG D+ +D + E ++  V+E    R   G DV+    G  +  
Sbjct: 192 KVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR---GADVVIVATGSPEAQ 248

Query: 232 KESLKLLNWGAQILVI-GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
            ++L+L+  G +IL   G   G    I  N+   +  T+ G Y  S          +  +
Sbjct: 249 AQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS---------PEDYK 299

Query: 291 ELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           E L   A G I +   I+H +   +   AF    D K + K++I
Sbjct: 300 EALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSL-KIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 5/123 (4%)

Query: 158 GVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
           GVG+AAVQ+ K  GA  +IAV R  EK++  K LG DHV++  +E  +  V+E    R  
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGR-- 58

Query: 217 KGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 275
            GVDV+ D VG   T +++L+LL  G +++V+G   G     P    L+K  T+ G   G
Sbjct: 59  -GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 276 SYK 278
             +
Sbjct: 118 GRE 120

Length = 131

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 83/271 (30%), Positives = 121/271 (44%), Gaps = 47/271 (17%)

Query: 3   ALVCRKLGD-PTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL------ 55
           ALV  K  D  +VS+          K   +  L     V +RV  +S+NY + L      
Sbjct: 3   ALVVEKDEDDVSVSV----------KNLTLDDLPEGD-VLIRVAYSSVNYKDGLASIPGG 51

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------GFAALGSFAQFI- 108
           +I+ +Y      PF+PG D +GTV  V  N   FK GD V       G +  G ++++  
Sbjct: 52  KIVKRY------PFIPGIDLAGTV--VESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYAR 103

Query: 109 VADQF--PVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQVLLVLGAAGGVGV 161
           V  ++  P+PKG  L  A  L  A  T+ ++ +HR + +      G VL V GA GGVG 
Sbjct: 104 VPAEWVVPLPKGLTLKEAMILGTAGFTAALS-IHRLEENGLTPEQGPVL-VTGATGGVGS 161

Query: 162 AAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV 221
            AV I    G  ++A    A+   +LK LG   V+    E +     + L+ ++  G   
Sbjct: 162 LAVSILAKLGYEVVASTGKADAADYLKKLGAKEVI--PREELQEESIKPLEKQRWAGA-- 217

Query: 222 LYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
             DPVGGK     L  L +G  + V G   G
Sbjct: 218 -VDPVGGKTLAYLLSTLQYGGSVAVSGLTGG 247

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 42/269 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V ++V+A  + +++     G        P VPG +  G +DAVG  VS +KVGD V    
Sbjct: 28  VLIKVEACGVCHSDAFVKEGAMP-GLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGW 86

Query: 96  ------------------------CGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP 128
                                    G    G +A++++A       +P   D   AA L 
Sbjct: 87  HGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLL 146

Query: 129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 188
            A  T+  AL + +    G ++ V G  GG+G  AVQ     G   +A++RG++K    +
Sbjct: 147 CAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR 204

Query: 189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVI 247
            LG  H +D S E V     E L  ++L G  ++       K     +  L    ++L++
Sbjct: 205 KLGAHHYIDTSKEDVA----EAL--QELGGAKLILATAPNAKAISALVGGLAPRGKLLIL 258

Query: 248 GFASGEIPVIPANIALVKNWTVHGLYWGS 276
           G A   + V P  + ++   ++HG   G+
Sbjct: 259 GAAGEPVAVSPLQL-IMGRKSIHGWPSGT 286

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 76/225 (33%), Positives = 99/225 (44%), Gaps = 20/225 (8%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V ++V  +SLNY + L I GK       P +PG D +GTV  V      F+ GD V    
Sbjct: 29  VLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEVIVTG 86

Query: 97  ---GFAALGSFAQFI--VADQF-PVPKGCDLLAAAALPVAFGT---SHVALVHRAQLSSG 147
              G +  G ++Q+    AD   P+P+G  L  A AL  A  T   S +AL         
Sbjct: 87  YGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPED 146

Query: 148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 207
             +LV GA GGVG  AV I    G  ++A    AE+  +LK LG   V+D   E + P  
Sbjct: 147 GPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPG 204

Query: 208 KEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
           K   K R    V    D VGG      L  L +G  +   G A G
Sbjct: 205 KPLEKERWAGAV----DTVGGHTLANVLAQLKYGGAVAACGLAGG 245

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 84.0 bits (208), Expect = 2e-18
 Identities = 93/330 (28%), Positives = 141/330 (42%), Gaps = 28/330 (8%)

Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
           +  H    P VL   E  P   +   V+V  KA  +NY +     G Y   P LP   G+
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLY-PPPSLPSGLGT 63

Query: 74  DYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQF--IVADQFPV-PKGCDLLAAAALPV 129
           + +G V  VG  V + KVGD V    +ALG+++    + AD+  + P       AAA  +
Sbjct: 64  EAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFL 123

Query: 130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 189
              T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I     A+K +  K 
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK 183

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
            G   V++   E+++  VKE    +K   V V+YD VG    + SL  L     ++  G 
Sbjct: 184 AGAWQVINYREENIVERVKEITGGKK---VRVVYDSVGKDTWEASLDCLQRRGLMVSFGN 240

Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LEDSLRELLLWAAKGL 300
           ASG  PV   N+ ++          GS  + RP +         L ++  EL    A G+
Sbjct: 241 ASG--PVTGVNLGILNQ-------KGSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291

Query: 301 ITIHI--SHTYSPSEANLAFSAIEDRKVIG 328
           I + +     +   +A  A   +E R   G
Sbjct: 292 IKVDVAEQQKFPLKDAQRAHEILESRATQG 321

Length = 327

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 83/332 (25%), Positives = 141/332 (42%), Gaps = 56/332 (16%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V +RVKA+ L  ++       ++       +PG + +G V AVGP V++F+VGD V    
Sbjct: 27  VLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYH 86

Query: 96  ---C---------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP 128
              C                     G+   G  A++++  +    P+P        A L 
Sbjct: 87  YVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLL 146

Query: 129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFL 187
              GT++ AL  R  +S    +LV+G AG VG+ A+ + +  GA  +I V    E+++  
Sbjct: 147 CGIGTAYHAL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELA 204

Query: 188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD----PVGGKLTKESLKLLNWGAQ 243
           K+LG D V++   +     V+E  +     G DV  +        +L  E+  +  WG  
Sbjct: 205 KALGADFVINSGQD----DVQEIRELTSGAGADVAIECSGNTAARRLALEA--VRPWGRL 258

Query: 244 ILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 302
           +LV  G   GE+ +  +N  + K  T+ G ++ S            L    L   + L+T
Sbjct: 259 VLVGEG---GELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEF--LARHKLEVDR-LVT 312

Query: 303 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
               H +   +A  A+ A+  +   GKV+  F
Sbjct: 313 ----HRFGLDQAPEAY-ALFAQGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 82.4 bits (204), Expect = 8e-18
 Identities = 71/305 (23%), Positives = 127/305 (41%), Gaps = 23/305 (7%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQIL--GKYQEKPPLPFVPGSDYSGTVDAVGPNVS 87
           P P       V VRV+   +  ++         +   P  P  PG +  G V A+GP V 
Sbjct: 13  PRPTPGPGQ-VLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVR 71

Query: 88  NFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 144
              VGD V G +  G+FA++ +AD     P+P   D  A    P+      + +  R  +
Sbjct: 72  GLAVGDRVAGLSG-GAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCA---LNVFRRGWI 127

Query: 145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV 203
            +G+ + V+G AG +G+  +Q+    GA  +IA+ R   ++   + LG   VV   +E++
Sbjct: 128 RAGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAI 186

Query: 204 IPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIA 262
           +  V+E        G DV+ + VG +     + +L+    ++++ G+       +P    
Sbjct: 187 VERVRELTGG---AGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTW 243

Query: 263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI--TIHISHTYSPSEANLAFSA 320
             K   +            P +  + +RE +   A G +     ++H +   E   AF A
Sbjct: 244 NWKGIDLINAVE-----RDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEA 298

Query: 321 IEDRK 325
              R 
Sbjct: 299 ARRRP 303

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 64/235 (27%), Positives = 90/235 (38%), Gaps = 47/235 (20%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------GFAAL 101
             P   G ++SG V  VG  V+ FKVGD V                         GF  L
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGL 122

Query: 102 GS----FAQFIVADQ---FPVPKGCDLLAAAAL--PVAFGTSHVAL--VHRAQLSSGQVL 150
           G     FA+++V        +P     L  AAL  P+A     VA   V R+    G   
Sbjct: 123 GGGGGGFAEYVVVPAYHVHKLPDNVP-LEEAALVEPLA-----VAWHAVRRSGFKPGDTA 176

Query: 151 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           LVLG AG +G+  +   K  GA+ II       + +  + LG   V+D +   V   V E
Sbjct: 177 LVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDV---VAE 232

Query: 210 FLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIAL 263
             K     GVDV +D  G + T   ++  L      + +      I   P ++ L
Sbjct: 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVL 287

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 81.7 bits (202), Expect = 3e-17
 Identities = 79/344 (22%), Positives = 131/344 (38%), Gaps = 67/344 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR++V AT + + +   I GK     PLP + G + +G V+++GP V+  K GD V    
Sbjct: 28  VRIKVVATGVCHTDLHVIDGKL--PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLF 85

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +FA++ V  
Sbjct: 86  GPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVS 145

Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           +     +     L     +   F T + A V+ A+++ G    V G  GGVG++ +   K
Sbjct: 146 EISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCK 204

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
             GA+ IIAV    +K +  K LG    ++   +   P + E L      GVD  ++ +G
Sbjct: 205 AAGASRIIAVDINKDKFEKAKQLGATECIN-PRDQDKP-IVEVLTEMTDGGVDYAFEVIG 262

Query: 228 G-KLTKESLKL--LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 284
                K++L    L  G  ++V    SG    +  N  L+   T+ G  +G +K      
Sbjct: 263 SADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPND-LLTGRTIKGTVFGGWKSKD--- 318

Query: 285 LEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVI 327
                + + L+  K   +   I+H     E N  F  +   + I
Sbjct: 319 --SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 81.1 bits (201), Expect = 4e-17
 Identities = 84/345 (24%), Positives = 134/345 (38%), Gaps = 71/345 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V VR+ AT + + +   + G   E    P V G + +G V+AVG  V++ K GD V    
Sbjct: 30  VLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLF 87

Query: 96  ---CG---------------------------------------FAALG--SFAQFIVAD 111
              CG                                       +  LG  +FA++ V  
Sbjct: 88  TPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVH 147

Query: 112 QF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           +     +     L  A  L     T   A+V+ A++  G  + V G  GGVG+AA+Q  K
Sbjct: 148 EISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAK 206

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
             GA  IIAV    EK++  K  G  H V+      +      L      G D  ++ VG
Sbjct: 207 AAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDG---GADYAFECVG 263

Query: 228 -GKLTKESLKLLNWGAQILVIGFA--SGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 284
             ++ +++L+  + G   ++IG A    EI   P  +   + W   G  +G     RP  
Sbjct: 264 NVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK--GSAFGGA---RPRS 318

Query: 285 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVI 327
               +  L+     G + +   ++HT    + N AF  + + K I
Sbjct: 319 ---DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI 360

Length = 366

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 83/310 (26%), Positives = 128/310 (41%), Gaps = 67/310 (21%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAA------------LGS-- 103
           P V G + SG V+AVGP V+    G  V          C +              LGS  
Sbjct: 54  PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAM 113

Query: 104 --------FAQFIV--ADQ-FPVPKGCDLLAAA-ALPVAFGTSHVAL--VHRAQLSSGQV 149
                   F +++V  A Q  P+P G  L  AA A P+A     VAL  V+RA   +G+ 
Sbjct: 114 RFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLA-----VALHAVNRAGDLAGKR 168

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVK 208
           +LV G AG +G   V   +  GA  I     A+  +   +++G D  V+L+ + +     
Sbjct: 169 VLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA--- 224

Query: 209 EFLKARKLKG-VDVLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKN 266
                   KG  DV+++  G      S L+++  G  ++ +G   G +P+ P N  + K 
Sbjct: 225 ----YAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPL-PLNALVAKE 279

Query: 267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDR 324
                   GS++        D   E +   A G I +   I+  +   EA  AF+   DR
Sbjct: 280 LD----LRGSFRFD------DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADR 329

Query: 325 KVIGKVMIAF 334
               KV ++F
Sbjct: 330 TRSVKVQLSF 339

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 78.3 bits (194), Expect = 3e-16
 Identities = 79/325 (24%), Positives = 121/325 (37%), Gaps = 69/325 (21%)

Query: 65  PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CG---------------FAALG- 102
            PLP V G + +G V+AVG  V+  K GD V      CG               F  L  
Sbjct: 53  TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNF 112

Query: 103 ---------------------------SFAQFIVADQ---FPVPKGCDLLAAAALPVAFG 132
                                      SFA + V  +     V K   L   A L     
Sbjct: 113 SGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQ 172

Query: 133 TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG 191
           T   A+++  +   G  + V GA G VG+AAV   K+ G  TIIAV     +++  K LG
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELG 231

Query: 192 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFA 250
             HV++   E ++ +++E        GVD   D  G   + ++++  L     + ++G  
Sbjct: 232 ATHVINPKEEDLVAAIREITGG----GVDYALDTTGVPAVIEQAVDALAPRGTLALVGAP 287

Query: 251 S--GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-ISH 307
               E+  +  N  LV   T+ G+  G      P      +  L+    +G      +  
Sbjct: 288 PPGAEVT-LDVNDLLVSGKTIRGVIEGD---SVPQEF---IPRLIELYRQGKFPFDKLVT 340

Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
            Y   + N A +  E  KVI  V+ 
Sbjct: 341 FYPFEDINQAIADSESGKVIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 77.9 bits (193), Expect = 4e-16
 Identities = 92/351 (26%), Positives = 152/351 (43%), Gaps = 73/351 (20%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           PIP+      V VRV+A       ++Y  + +I G +  K P+  V G + +GTV AVG 
Sbjct: 16  PIPEP-GPGEVLVRVRAVGICGSDVHYYKHGRI-GDFVVKEPM--VLGHESAGTVVAVGS 71

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL----GSFAQFIV--ADQ-F 113
            V++ KVGD V       C                  FAA     G+  +++   AD   
Sbjct: 72  GVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCH 131

Query: 114 PVPKGCDLLAAAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
            +P    L   A + P++ G   V    RA +  G  +LV GA G +G+    + K  GA
Sbjct: 132 KLPDNVSLEEGALVEPLSVG---VHACRRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGA 187

Query: 173 T-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
           T ++       +++F K LG  H V++  E    S ++  +    KG DV+ +  G    
Sbjct: 188 TKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG---- 243

Query: 232 KES-----LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL--YWGSYKIHRPHV 284
            ES     +     G  ++++G    E+ + P + A ++   + G+  Y  +Y    P  
Sbjct: 244 AESCIQTAIYATRPGGTVVLVGMGKPEVTL-PLSAASLREIDIRGVFRYANTY----PTA 298

Query: 285 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFS-AIEDRKVIGKVMI 332
           +     ELL   A G + +   I+H +   +A  AF  A + +K + KV+I
Sbjct: 299 I-----ELL---ASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 97/379 (25%), Positives = 149/379 (39%), Gaps = 80/379 (21%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A+V +  GD            V  +  PIPQ+   T   V+V A ++  ++    L  
Sbjct: 1   MKAVVFKGPGD------------VRVEEVPIPQIQDPTDAIVKVTAAAICGSD----LHI 44

Query: 61  YQ--EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG-------------- 97
           Y+        FV G ++ G V  VGP V   KVGD V       CG              
Sbjct: 45  YRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA 104

Query: 98  ----FAALGSF------AQFI---VADQ--FPVPKGCD----LLAAAALPVAFGTSHVAL 138
               F   GS       A+++    AD     +P G      LL    LP  +       
Sbjct: 105 KGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFG----- 159

Query: 139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD 197
             RAQ+  G  + V+G  G VG+ AV   +V GA  + AV    E+++   +LG    ++
Sbjct: 160 AKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA-EPIN 217

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGF-ASGEIP 255
             +   +  V+E  + R   G DV+ + VGG      +  L+  G  I  +G   + E P
Sbjct: 218 FEDAEPVERVREATEGR---GADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFP 274

Query: 256 VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 315
             P   A  KN T+    +G   +    +  + L   LL + +  +   I H     EA 
Sbjct: 275 F-PGLDAYNKNLTLR---FGRCPVRS--LFPELLP--LLESGRLDLEFLIDHRMPLEEAP 326

Query: 316 LAFSAIEDRKVIGKVMIAF 334
            A+   + RKV  KV++  
Sbjct: 327 EAYRLFDKRKV-LKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 67/290 (23%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILG------KYQE------KPPLPFVPGSDYSG 77
           P+P+      V ++V A S        I G      ++ E      KPPL  + G +++G
Sbjct: 19  PVPKPGP-GEVLIKVLAAS--------ICGTDVHIYEWDEWAQSRIKPPL--IFGHEFAG 67

Query: 78  TVDAVGPNVSNFKVGDTV-------CGFAAL--------------------GSFAQFIVA 110
            V  VG  V+  KVGD V       CG                        G FA+++V 
Sbjct: 68  EVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVV- 126

Query: 111 DQFPVPKGCDLLAAAALPVAFGTSHVAL---VHRAQLS--SGQVLLVLGAAGGVGVAAVQ 165
               VP+         +P    +    L   VH       SG+ +L+ G  G +G+ A+ 
Sbjct: 127 ----VPEENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDVSGKSVLITGC-GPIGLMAIA 181

Query: 166 IGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 224
           + K  GA  +IA      +++  K +G D V++   E     V E        GVDV+ +
Sbjct: 182 VAKAAGASLVIASDPNPYRLELAKKMGADVVINPREE----DVVEVKSVTDGTGVDVVLE 237

Query: 225 PVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 273
             G     ++ LK L  G ++ ++G   G + +   N+ + K  TV G+ 
Sbjct: 238 MSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGIT 287

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 73.7 bits (182), Expect = 1e-14
 Identities = 68/253 (26%), Positives = 100/253 (39%), Gaps = 50/253 (19%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV-------------------------------- 95
           P VPG +  G V AVG  V+ FKVGD V                                
Sbjct: 54  PLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNG 113

Query: 96  ---CGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G +A  IV D+   F +P+G D  AAA L  A  T +  L  R  +  G+ 
Sbjct: 114 KYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKR 172

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           + V+G  GG+G  AV+  K  GA + A +R   K +    LG D  +   +        E
Sbjct: 173 VGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDP-------E 224

Query: 210 FLKARKLKGVDVLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 268
            +K      +D++ D V      +  L LL  G  ++++G     +PV P  + +    +
Sbjct: 225 AMKKAA-GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPL-IFGRKS 282

Query: 269 VHGLYWGSYKIHR 281
           V G   G  K  +
Sbjct: 283 VAGSLIGGRKETQ 295

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 70.4 bits (173), Expect = 7e-14
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 25/194 (12%)

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGC 119
           EK PLP  PG    G V  VG  V+ FK GD V  F   G  A+ +V       P+P G 
Sbjct: 16  EKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGL 72

Query: 120 DLLAAAALPVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIA 176
               AA   +A      AL  V  A+   G+ + V+G  G VG+ A Q+ K  GA  ++ 
Sbjct: 73  PPERAALTALA----ATALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVG 127

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESL 235
           V   A + +  ++LG         + V     + +  R   G DV+ +  G     + +L
Sbjct: 128 VDPDAARRELAEALGPA-------DPVAADTADEIGGR---GADVVIEASGSPSALETAL 177

Query: 236 KLLNWGAQILVIGF 249
           +LL    +++++G+
Sbjct: 178 RLLRDRGRVVLVGW 191

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 68.3 bits (168), Expect = 5e-13
 Identities = 61/172 (35%), Positives = 80/172 (46%), Gaps = 16/172 (9%)

Query: 39  AVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--- 95
            V V V  ++LNY + L I GK       P VPG D +GTV  V  +   FK GD V   
Sbjct: 29  DVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTV--VESSSPRFKPGDRVVLT 86

Query: 96  ---CGFAALGSFAQF--IVADQF-PVPKGCDLLAAAALPVAFGT---SHVALV-HRAQLS 145
               G    G +AQ   + AD   P+P+G     A A+  A  T     +AL  H     
Sbjct: 87  GWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPG 146

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 197
            G VL V GAAGGVG  AV +    G  ++A     E+  +L+SLG   ++D
Sbjct: 147 DGPVL-VTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 29/226 (12%)

Query: 68  PFVPGSDYSGTVDAVGPNVSN-FKVGDTVCGFAAL-----------------GSFAQFIV 109
             V G ++ G V   GP      KVG  V     L                 G +A++++
Sbjct: 64  DIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYML 123

Query: 110 ADQ---FPVPKGCDLLAAA-ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 165
             +     VP G  +  AA   P+A G   V    RA+L+ G+V LV+G  G +G+A + 
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVGLHAVR---RARLTPGEVALVIGC-GPIGLAVIA 179

Query: 166 IGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 224
             K  G   I+A     E+     ++G D VVD + +S   +    L         V+++
Sbjct: 180 ALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFE 239

Query: 225 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
            VG   L ++ ++    G +I+V+G       + PA +A+ K  T+
Sbjct: 240 CVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPA-LAIRKELTL 284

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 69/262 (26%), Positives = 106/262 (40%), Gaps = 53/262 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-G 59
           M+ALV    G   +S  D   P +   T+ I          V++  T++   + L IL G
Sbjct: 1   MKALV--YHGPGKISWEDRPKPTIQEPTDAI----------VKMLKTTICGTD-LHILKG 47

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALGSFAQ--- 106
                 P   + G +  G V+ VG  V+NFKVGD V          CG+   G ++    
Sbjct: 48  DVPTVTP-GRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCES 106

Query: 107 ------------------FIVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 146
                                AD   + +P+G D  AA  L     T +   V   ++  
Sbjct: 107 GGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKP 166

Query: 147 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           G  + ++GA G VG+AA+   ++   + II V     +++  K LG  H V+ +    I 
Sbjct: 167 GDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIE 225

Query: 206 SVKEFLKARKLKGVDVLYDPVG 227
            V E    R   GVDV+ + VG
Sbjct: 226 QVLELTDGR---GVDVVIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 63.6 bits (155), Expect = 1e-12
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 14/143 (9%)

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
           LG D V+D + E       +F +A   +GVDV+ D VGG+    +L  L  G +++ IG 
Sbjct: 1   LGADEVIDYTTE-------DFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGG 53

Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY 309
                      +++       G+         P      L EL      G +   I   +
Sbjct: 54  P-------DLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRVF 106

Query: 310 SPSEANLAFSAIEDRKVIGKVMI 332
              EA  A   +E  +  GKV++
Sbjct: 107 PLEEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 78/326 (23%), Positives = 122/326 (37%), Gaps = 76/326 (23%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNF------KVGDTV-------------C---------- 96
           PLP + G +  G V A+G  V+        KVGD V             C          
Sbjct: 53  PLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCEN 112

Query: 97  ----GFAA-------LGSFAQFIV----ADQFPVPKGCDLLAAAALPVAFGTSHVALVHR 141
               G  A        G +A+ I          VP       AA    A  T  +A + R
Sbjct: 113 RKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATV-LAALDR 171

Query: 142 AQLSS-GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLS 199
           A     G  ++V GA G +G+ AV   K+ GA  +I +    E+++  +  G D  +D+ 
Sbjct: 172 AGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDID 230

Query: 200 NESVIPSVKEFLKARKL---KGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG--FASGE 253
               +P  +     R +   +G DV+ +  G      E L+LL  G   +++G    +G 
Sbjct: 231 ---ELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGT 287

Query: 254 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL------LLWAAKGLITIHISH 307
           +P+ P  I   KN T+ G+         P  L  ++R L        +A        ++H
Sbjct: 288 VPLDPERIVR-KNLTIIGV-HNY----DPSHLYRAVRFLERTQDRFPFAEL------VTH 335

Query: 308 TYSPSEANLAFSAIEDRKVIGKVMIA 333
            Y   + N A    E    + KV+I 
Sbjct: 336 RYPLEDINEALELAESGTAL-KVVID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 65.0 bits (159), Expect = 8e-12
 Identities = 69/280 (24%), Positives = 105/280 (37%), Gaps = 45/280 (16%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
           P P++       VRV ATS+  ++ L I  G          + G ++ G V  VG +V  
Sbjct: 18  PDPKIQGPHDAIVRVTATSICGSD-LHIYRGGVPGAKH-GMILGHEFVGEVVEVGSDVKR 75

Query: 89  FKVGDTV-------CG----------------------FAAL-GSFAQFIV---ADQ--F 113
            K GD V       CG                         + G  A+++    AD    
Sbjct: 76  LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLA 135

Query: 114 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT 173
            +P G     A  L     T        A +  G  + V+GA G VG+ AV   ++ GA 
Sbjct: 136 KIPDGLPDEDALMLSDILPTGFHGAE-LAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAA 193

Query: 174 -IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
            IIAV    E++   K  G   +++  N  ++  + E    R   GVD + + VG + T 
Sbjct: 194 RIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGR---GVDCVIEAVGFEETF 250

Query: 233 ES-LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
           E  +K++  G  I  +G      P+        KN T   
Sbjct: 251 EQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKT 290

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 52/246 (21%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGF--------AAL--------- 101
           P+P V G ++ G V  VG  V+ FKVGD V       CG           L         
Sbjct: 56  PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV 115

Query: 102 ---GSFAQFIV---ADQFPVPKGCDL-LAAAALPVAFGTSHVALVHRAQLS---SGQVLL 151
              G+FA+++V    + + +P      LAA   P  FG +    VH A LS    G+ +L
Sbjct: 116 NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDP--FGNA----VHTA-LSFDLVGEDVL 168

Query: 152 VLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 210
           + GA G +G+ A  + K  GA  ++       +++  + +G    V+++ E +   + E 
Sbjct: 169 ITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAEL 227

Query: 211 LKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALV--KNW 267
                 +G DV  +  G     ++ L  +N G +I ++G   G++ +   +   V  K  
Sbjct: 228 ---GMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAI---DWNKVIFKGL 281

Query: 268 TVHGLY 273
           T+ G+Y
Sbjct: 282 TIKGIY 287

Length = 341

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 16/172 (9%)

Query: 87  SNFKVGDTVCGFAALGSFAQFIVADQ-------FPVPKGCDLLAAAALPV--AFG-TSHV 136
           S F VG  V      G     +   +        P     DL  + AL V    G T++ 
Sbjct: 76  SKFPVGTIVVAS--FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYF 133

Query: 137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 196
            L+   +  +G+ ++V GAAG VG    QI K+ G  +I  A   +K+ +LK LG D V 
Sbjct: 134 GLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVF 193

Query: 197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
           +        S++E LK     G+D  +D VGG+ +   L  +N   ++ V G
Sbjct: 194 NYKTV----SLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCG 241

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 12/178 (6%)

Query: 133 TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV 192
           T++  L+    +  G+ ++V  AAG VG    QI K+ G  ++  A   EK+ +LK LG 
Sbjct: 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF 184

Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS- 251
           D      N   + S++E LK     G D  +D VGG+ +   +  +    +I + G  S 
Sbjct: 185 DVAF---NYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIST 241

Query: 252 ----GEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH 304
               G +P  P   I + +   + G     ++     V + +L+ELL W  +G I   
Sbjct: 242 YNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ---GEVRQKALKELLKWVLEGKIQYK 296

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 63.3 bits (154), Expect = 3e-11
 Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 46/280 (16%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           P+P+      V ++V ATS     ++  N+ +     Q +   P V G + +G V  +GP
Sbjct: 17  PVPEPGPGE-VLIKVLATSICGTDVHIYNWDEW---AQSRIKPPQVVGHEVAGEVVGIGP 72

Query: 85  NVSNFKVGDTV-------CG--FAAL------------------GSFAQFIVADQFPVPK 117
            V   KVGD V       CG  +A                    G FA++ V     + K
Sbjct: 73  GVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWK 132

Query: 118 GCDLLAA--AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-I 174
               +    A +    G + V  V    +S   VL+    AG +G+ A+ + K  GA  +
Sbjct: 133 NPKSIPPEYATIQEPLGNA-VHTVLAGPISGKSVLVT--GAGPIGLMAIAVAKASGAYPV 189

Query: 175 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKE 233
           I       +++  K +G  +VV+   E V+  V +       +GVDV  +  G  K  ++
Sbjct: 190 IVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDG---EGVDVFLEMSGAPKALEQ 246

Query: 234 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 273
            L+ +  G ++ ++G   G++ +   N  + K  T++G+ 
Sbjct: 247 GLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT 286

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 78/345 (22%), Positives = 129/345 (37%), Gaps = 67/345 (19%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V V++ A+ L +++   + G     P  P + G + +G V  VGP V+  K GD V    
Sbjct: 29  VLVKLVASGLCHSDEHLVTGDL-PMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSF 87

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                            LG+F+++ V  
Sbjct: 88  IPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVP 147

Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           +     +     L  A  +     T   + V+ A +  G  ++V+G  GGVG+ AVQ   
Sbjct: 148 EASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGI-GGVGINAVQGAA 206

Query: 169 VCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
           V GA  +IAV     K +     G  H    S E  +  V+E    +      +    V 
Sbjct: 207 VAGARKVIAVDPVEFKREQALKFGATHAFA-SMEEAVQLVRELTNGQGADKTIITVGEVD 265

Query: 228 GKLTKESLKLLNWGAQILVIG---FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 284
           G+   E+L     G +++V G    A  ++ V    + L++      L+ G+     P  
Sbjct: 266 GEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTLFGGA----NPRA 321

Query: 285 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVI 327
             D  R L L+ A G + +   I+ TY+  + N  +  + D K I
Sbjct: 322 --DIPRLLELYRA-GKLKLDELITRTYTLDQINEGYQDMLDGKNI 363

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 59.2 bits (144), Expect = 3e-11
 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 28/100 (28%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC--- 96
           V VRVKA  +  ++     G       LP + G + +G V+ VGP V+  KVGD V    
Sbjct: 4   VLVRVKAAGICGSDLHIYRG-EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 97  ------------------------GFAALGSFAQFIVADQ 112
                                   G    G FA+++V   
Sbjct: 63  LIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPA 102

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 21/196 (10%)

Query: 66  PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQF------PVPKGC 119
           P       D  G           F VGD V  F     +  + V D        P     
Sbjct: 67  PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNW--PWQTYAVLDGSSLEKVDPQLVDG 124

Query: 120 DL---LAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT- 173
            L   L A  LP    T+ + +  +  ++ G  Q ++V GAAG  G  A QIG++ G + 
Sbjct: 125 HLSYFLGAVGLPGL--TALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSR 182

Query: 174 IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
           ++ +    EK + LKS LG D  ++   ++V     E L+    +GVDV +D VGG+++ 
Sbjct: 183 VVGICGSDEKCQLLKSELGFDAAINYKTDNVA----ERLRELCPEGVDVYFDNVGGEISD 238

Query: 233 ESLKLLNWGAQILVIG 248
             +  +N  + I++ G
Sbjct: 239 TVISQMNENSHIILCG 254

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 61/220 (27%), Positives = 87/220 (39%), Gaps = 43/220 (19%)

Query: 77  GTVDAVGPNVSNFKVGDTV---------------CGFAAL---------------GSFAQ 106
           G V+ VG  V +FK GD V                G+ +                G FA+
Sbjct: 63  GVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAE 122

Query: 107 FIV-----ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 161
           +       A+  P+P G     A  LP    T        A +  G  + V G  G VG+
Sbjct: 123 YFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGI-GPVGL 180

Query: 162 AAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 220
            AV   ++ GA  IIAV     +++  K  G   +VD  N  V   V++ LK    KGVD
Sbjct: 181 MAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDV---VEQILKLTGGKGVD 237

Query: 221 VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPV-IP 258
            +    GG+ T E  LK+L  G  I  + +   +  + IP
Sbjct: 238 AVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIP 277

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 40/215 (18%)

Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           +V    +    V     PIP++     V V+V ++ L  ++  +I          P   G
Sbjct: 3   SVVNDTDGI--VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHY--YPITLG 58

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVC---------------GFAAL------------GSFA 105
            ++SG V+AVG  V +   GD V                GF +L            G  A
Sbjct: 59  HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNA 118

Query: 106 QFIV---ADQFPVPKGCDLLAAAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 161
           ++IV    + F +P    +   A + P+  G   +   H AQ   G+ ++++G AG +G+
Sbjct: 119 EYIVVKRKNLFALPTDMPIEDGAFIEPITVG---LHAFHLAQGCEGKNVIIIG-AGTIGL 174

Query: 162 AAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHV 195
            A+Q     GA ++ A+   +EK+   KSLG    
Sbjct: 175 LAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQT 209

Length = 347

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 60.2 bits (146), Expect = 4e-10
 Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 41/230 (17%)

Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC---------------------------GFA 99
            P V G ++SG V+  G NV NF+ GD V                            GF+
Sbjct: 87  FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFS 146

Query: 100 ALGSFAQFIVADQFPVPKGCDLLA---------AAALPVAFGTSHVALVHRA-QLSSGQV 149
           A G+FA++I  +     +  +L           A AL      ++  L  R      G  
Sbjct: 147 ADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAY 206

Query: 150 LLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
           ++V G AG +G+AA+ + K  GA+ +IA     E+    K +G D+V + +      S +
Sbjct: 207 VVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGE 265

Query: 209 EFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPV 256
           + ++  K  G D+  +  G       +  K +    +I+ IG A+  +P+
Sbjct: 266 KVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPL 315

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 51/263 (19%)

Query: 40  VRVRVKA-----TSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDT 94
           VRVR+KA     + ++Y   ++    +  K P+  V G + +G ++ VG  V +  VGD 
Sbjct: 44  VRVRMKAVGICGSDVHYLKTMRC-ADFVVKEPM--VIGHECAGIIEEVGSEVKHLVVGDR 100

Query: 95  V-------------C--GFAAL-------------GSFAQFIV--ADQ-FPVPKGCDLLA 123
           V             C  G   L             GS A  +V  AD  F +P+   L  
Sbjct: 101 VALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE 160

Query: 124 AAAL-PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA 181
            A   P++ G   V    RA +     +LV+GA G +G+  +   +  GA  I+ V    
Sbjct: 161 GAMCEPLSVG---VHACRRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDD 216

Query: 182 EKIKFLKSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLL 238
           E++   K LG D +V +S   E V   V+E  KA    G+DV +D VG  K    +L+  
Sbjct: 217 ERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALEAT 275

Query: 239 NWGAQILVIGFASGE--IPVIPA 259
             G ++ ++G    E  +P+ PA
Sbjct: 276 RAGGKVCLVGMGHNEMTVPLTPA 298

Length = 364

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 78/348 (22%), Positives = 135/348 (38%), Gaps = 71/348 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--- 95
           V V++ A  L +++   I G   ++P PLP   G + +G V  VG  V++ +VGD V   
Sbjct: 36  VLVKIAAAGLCHSDLSVING---DRPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLV 92

Query: 96  ----CG-----------------------------------------FAALGSFAQFIVA 110
               CG                                            + +FA++ V 
Sbjct: 93  FVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV 152

Query: 111 DQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG 167
            +     + K   L  AA    A  T   A+V+ A +  GQ + V+G  GGVG++A+   
Sbjct: 153 SRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGA 211

Query: 168 KVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 226
              GA+ ++AV    +K+   + LG    V+  + + +  V+E        GVD  ++  
Sbjct: 212 VAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGG----GVDYAFEMA 267

Query: 227 GGKLTKES-LKLLNWGAQILVIGFASGE--IPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           G     E+  ++   G   +  G    E  + V   ++   +  T+ G Y GS    R  
Sbjct: 268 GSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV-AEERTLKGSYMGSCVPRR-- 324

Query: 284 VLEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVIGKV 330
              D  R L L+ +  L +   ++H     E N  F  +   + + +V
Sbjct: 325 ---DIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 16/174 (9%)

Query: 102 GSFAQFIVAD-QFPVPKGCDLLAAAALPV--------AFGTSHVALVHRAQLSSGQVLLV 152
           G FA  IV   +         LAAA LP+        A  T + A V +A L  G +++V
Sbjct: 114 GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIV 172

Query: 153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV---DLSNESVIPSVKE 209
           +GA GGVG   VQ  K  GA ++A+    EK++ +K  G D  +   D S   V   +K 
Sbjct: 173 IGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA 231

Query: 210 FLKARKLKGVD-VLYDPVGGKLTKES-LKLLNWGAQILVIGFASGEIPVIPANI 261
           F KAR L+     +++  G K  +ES L LL+ G  ++V+G+   +     +N+
Sbjct: 232 FAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNL 285

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 54/204 (26%), Positives = 80/204 (39%), Gaps = 48/204 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGD-------TVCG----------------------- 97
           PF+ G + +G V+AVG  V++   GD        VCG                       
Sbjct: 55  PFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKM 114

Query: 98  --------FAAL--GSFAQ--FIVADQ-FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 144
                     AL  G+FA+   + A Q   V    D  AA  L         A V+   +
Sbjct: 115 TLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV 174

Query: 145 SSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESV 203
             G  + V+G  GGVG AA+    + GA+ IIAV     K+++ +  G  H V+ S    
Sbjct: 175 KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDP 233

Query: 204 IPSVKEFLKARKLKGVDVLYDPVG 227
           + +++         G DV+ D VG
Sbjct: 234 VEAIRALTGGF---GADVVIDAVG 254

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 86/356 (24%), Positives = 142/356 (39%), Gaps = 85/356 (23%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGK----YQEKPPL---PFVPGSDYSGTVDAV 82
           PIPQ  ++  VRV+VK           I G     Y+   P    P V G ++ G +DAV
Sbjct: 18  PIPQ-PAAGEVRVKVK--------LAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAV 68

Query: 83  GPNVSNFKVGDTV-------CG---------------FAAL-----GSFAQFIVADQFPV 115
           G  V   ++G+ V       CG                  L     G F+++ V     V
Sbjct: 69  GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAV-----V 123

Query: 116 PKGCDLLAAAALPVAFGTSHVALV----------HRAQLSSGQVLLVLGAAGGVGVAAVQ 165
           P       A  +P A    +  +V           R   +   V L+ G AG VG+  VQ
Sbjct: 124 PAK----NAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYG-AGPVGLTIVQ 178

Query: 166 IGK-VCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
           + K V     +I   R  E++   K  G D V++ + E     + E L+ + +K   ++ 
Sbjct: 179 VLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQE----PLGEALEEKGIKPT-LII 233

Query: 224 DPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 282
           D      + +E++ L +  A+I+++GF+S    ++   I   K  ++      + K   P
Sbjct: 234 DAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGIT-GKELSIFSSRLNANKF--P 290

Query: 283 HVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIE-DRKVIGKVMIAFD 335
            V++        W +KGLI     I+HT+       A    E D++   KV++ F 
Sbjct: 291 VVID--------WLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338

Length = 339

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 53.7 bits (129), Expect = 5e-08
 Identities = 60/244 (24%), Positives = 92/244 (37%), Gaps = 32/244 (13%)

Query: 68  PFVPGSDYSG-----TVDAVGPNVSNFKVGDTVCGFAALGSFA----------QFIVADQ 112
           PFVPG    G      VD+  PN   FK GD + G      ++          +  + D 
Sbjct: 73  PFVPGQRIEGFGVSKVVDSDDPN---FKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDD 129

Query: 113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
            P+     LL  A       T++           G  + V  A+G VG    Q+ K+ G 
Sbjct: 130 IPLSYHLGLLGMAGF-----TAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC 184

Query: 173 TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
            ++  A  ++K+  LK+ LG D   +   E   P +   LK    +G+D+ +D VGG + 
Sbjct: 185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEE---PDLDAALKRYFPEGIDIYFDNVGGDML 241

Query: 232 KESLKLLNWGAQILVIGFASGEIPVIPANI-----ALVKNWTVHGLYWGSYKIHRPHVLE 286
             +L  +    +I V G  S         I      + K   + G     Y    P  LE
Sbjct: 242 DAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLE 301

Query: 287 DSLR 290
           +  R
Sbjct: 302 NVSR 305

Length = 348

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 68/286 (23%), Positives = 111/286 (38%), Gaps = 34/286 (11%)

Query: 68  PFVPGS--DYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDL--LA 123
           PF PG      G    V     +FKVGD V GF     + ++ +     +P+G DL  + 
Sbjct: 68  PFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTG---WEEYSL-----IPRGQDLRKID 119

Query: 124 AAALPV-----AFG----TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 174
              +P+       G    T++       +   G+ + V  A+G VG    Q+ K+ G  +
Sbjct: 120 HTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYV 179

Query: 175 IAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE 233
           +  A   EK+  LK+ LG D   +   E   P +   LK     G+D+ +D VGGK+   
Sbjct: 180 VGSAGSDEKVDLLKNKLGFDDAFNYKEE---PDLDAALKRYFPNGIDIYFDNVGGKMLDA 236

Query: 234 SLKLLNWGAQILVIGFAS----GEIPVIPANIALV-KNWTVHGLYWGSYKIHRPHVLEDS 288
            L  +N   +I   G  S         +   + ++ K   + G   G Y     H   + 
Sbjct: 237 VLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL----HRYPEF 292

Query: 289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
           L E+  +  +G +            A  AF  +     IGK ++  
Sbjct: 293 LEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 35/166 (21%)

Query: 77  GTVDAVGPNVSNFKVGD----------------------TVC------GFAALGSFA-QF 107
           G V  VGP V++ KVGD                      T+C      G+   G  A Q 
Sbjct: 63  GIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQC 122

Query: 108 IVADQFP--VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 165
           IV   +   VP+G D   A+++  A  T++ A +  + +  GQ + + G AGG+G  A+Q
Sbjct: 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKA-IKVSGIKPGQWIAIYG-AGGLGNLALQ 180

Query: 166 IGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD-LSNESVIPSVKE 209
             K V  A +IAV    +K+   K +G D  ++    E V   ++E
Sbjct: 181 YAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQE 226

Length = 338

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 84/353 (23%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT + + +   + G   E    P + G + +G V++VG  V++ K GD V    
Sbjct: 30  VRIKILATGVCHTDAYTLSGADPEGL-FPVILGHEGAGIVESVGEGVTSVKPGDHVIPLY 88

Query: 96  -----------------CG-----------------FAALG----------SFAQF-IVA 110
                            C                  F+  G          +F+++ +VA
Sbjct: 89  TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVA 148

Query: 111 D--------QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVA 162
           +        + P+ K C  L    +   +G    A+++ A++  G  + V G  G VG+A
Sbjct: 149 EISVAKINPEAPLDKVC--LLGCGVTTGYG----AVLNTAKVEPGSTVAVFGL-GAVGLA 201

Query: 163 AVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV 221
            +Q  K  GA+ II +    +K +  K  G    V+  +      +++ L      GVD 
Sbjct: 202 VIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHD--KPIQQVLVEMTDGGVDY 259

Query: 222 LYDPVGG-KLTKESLKLLN--WGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGS 276
            ++ +G  K+ + +L+  +  WG  + +IG A+   EI   P    LV      G  +G 
Sbjct: 260 TFECIGNVKVMRAALEACHKGWGTSV-IIGVAAAGQEISTRPFQ--LVTGRVWKGTAFGG 316

Query: 277 YKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI 327
           +K          + +L+    KG I +   I+HT    E N AF  +   K I
Sbjct: 317 WKS------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSI 363

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 61/207 (29%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT +  ++   + GK     P P + G + +G V++VG  V+  K GD V    
Sbjct: 35  VRIKIVATGICRSDDHVVSGK--LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLF 92

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+++ V D
Sbjct: 93  VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVD 152

Query: 112 QFPVPKGCDLLAAAALPVA------FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ 165
           +  V K   + AAA L         F T + A V+ A+++ G    V G  GGVG++A+ 
Sbjct: 153 EIAVAK---IDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIM 208

Query: 166 IGKVCGAT-IIAVARGAEKIKFLKSLG 191
             K  GA+ IIAV    +K    K LG
Sbjct: 209 GCKAAGASRIIAVDINKDKFAKAKELG 235

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 47.1 bits (113), Expect = 6e-06
 Identities = 63/268 (23%), Positives = 97/268 (36%), Gaps = 92/268 (34%)

Query: 30  PIPQLNSSTAVRVRVKATSL---------NYANYLQ---ILGKYQEKPPLPFVPGSDYSG 77
           P P++   T   VRV AT++          Y   ++   ILG   E     F+      G
Sbjct: 18  PDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILG--HE-----FM------G 64

Query: 78  TVDAVGPNVSNFKVGDTV-------CG---------FAA--------------------- 100
            V+ VGP V N KVGD V       CG         ++                      
Sbjct: 65  VVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGI 124

Query: 101 ------LGSF----AQFI---VAD--QFPVPKGCD----LLAAAALPVAFGTSHVALVHR 141
                  G +    A+++    AD   F +P        L  +  LP    T + A    
Sbjct: 125 FGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILP----TGYHAAEL- 179

Query: 142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSN 200
           A++  G  + V G  G VG+ A +  K+ GA  +IA+ R  E+++  +S      ++   
Sbjct: 180 AEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE 238

Query: 201 ESVIPS-VKEFLKARKLKGVDVLYDPVG 227
              +   ++E    R   G DV  D VG
Sbjct: 239 VDDVVEALRELTGGR---GPDVCIDAVG 263

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 46/165 (27%), Positives = 62/165 (37%), Gaps = 40/165 (24%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV--------C----------------------- 96
           P VPG +  G V  +G NV  FK GD V        C                       
Sbjct: 67  PIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNS 126

Query: 97  ----GFAALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G ++  IV DQ  V   P    L A A L  A  T +  + +      G+ 
Sbjct: 127 IGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKH 186

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD 193
           L V G  GG+G  AV+IGK  G  +  ++  + K  + +  LG D
Sbjct: 187 LGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGAD 230

Length = 360

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 50/174 (28%), Positives = 67/174 (38%), Gaps = 40/174 (22%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV--------C----------------------- 96
           P VPG +  G V  VG +VS F VGD V        C                       
Sbjct: 64  PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYND 123

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G FA  +V DQ     +P+G     AA L  A  T +  L H     SG  
Sbjct: 124 VYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLR 183

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNES 202
             +LG  GGVG   V+I K  G  +  ++   +K  + L+ LG D  +  S+ +
Sbjct: 184 GGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAA 236

Length = 357

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 76/353 (21%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V VR+ AT + + +   + G   E    P + G + +G V+AVG  V++ KVGD V    
Sbjct: 29  VLVRIVATGVCHTDAFTLSGADPEGV-FPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLY 87

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         +    +F+++ V  
Sbjct: 88  TAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVP 147

Query: 112 QFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           +  + K      L     L     T   A+++ A++  G  + V G  GG+G++ +Q  +
Sbjct: 148 EISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGAR 206

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
           +  A+ IIA+     K +  K LG    V+ ++      ++E +      GVD  ++ +G
Sbjct: 207 MAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD--KPIQEVIVEITDGGVDYSFECIG 264

Query: 228 G-KLTKESLKLLN--WGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYK--IH 280
              + + +L+  +  WG  I +IG A    EI   P  +   + W   G  +G  K    
Sbjct: 265 NVNVMRAALECCHKGWGESI-IIGVAGAGQEISTRPFQLVTGRVW--RGSAFGGVKGRTE 321

Query: 281 RPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVM 331
            P ++E  +        KG I +   ++HT    + N AF  + + K I  V+
Sbjct: 322 LPGIVEQYM--------KGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVI 366

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 75/265 (28%)

Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
            +V+ + E  P       +R++V +TSL  ++    L  ++ +   P + G + SG V++
Sbjct: 24  ALVMEEVEVSPP--QPLEIRIKVVSTSLCRSD----LSAWESQALFPRIFGHEASGIVES 77

Query: 82  VGPNVSNFKVGDTV-------CG------------------------------------- 97
           +G  V+ F+ GD V       CG                                     
Sbjct: 78  IGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGK 137

Query: 98  ----FAALGSFAQFIVADQFPVPKGCDLLAAAALP----------VAFGTSHVALVHRAQ 143
               + A+ SF+++ V     V  GC +      P          VA G      V  A 
Sbjct: 138 PVYHYCAVSSFSEYTV-----VHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNV--AD 190

Query: 144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNES 202
           +S G  +++ G  G VG++  Q  K+ GA+ II V    EK +  K+ GV   ++  N+ 
Sbjct: 191 VSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN-PNDL 248

Query: 203 VIPSVKEFLKARKLKGVDVLYDPVG 227
             P +++ +K     G D  ++ VG
Sbjct: 249 SEP-IQQVIKRMTGGGADYSFECVG 272

Length = 378

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV---VDL 198
             +  +V+LV GAAGG+G AA Q     G  ++   R  E+ +    SLG DH    +D+
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDV 60

Query: 199 SNESVIPSVKEFLKARKLKGVDVLYDPVG 227
           S+E+ I    E L  R+   +DVL +  G
Sbjct: 61  SDEAQIREGFEQL-HREFGRIDVLVNNAG 88

Length = 520

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 81/382 (21%), Positives = 139/382 (36%), Gaps = 97/382 (25%)

Query: 3   ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ 62
           A V  + G P V    E +P         PQ   +  VR+++  TSL + +      K Q
Sbjct: 5   AAVAWEAGKPLVIEEVEVAP---------PQ---AMEVRIKILHTSLCHTDVYFWEAKGQ 52

Query: 63  EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG------------------ 97
             P  P + G + +G V++VG  V++ K GD V       C                   
Sbjct: 53  T-PLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRI 111

Query: 98  ------------------------FAALGSFAQFIVAD---------QFPVPKGCDLLAA 124
                                   F    +F+++ V           + P+ K C  L +
Sbjct: 112 NTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVC--LLS 169

Query: 125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEK 183
             +    G    A  + A++  G  + + G  G VG+A  +  ++ GA+ II V     K
Sbjct: 170 CGVSTGLG----AAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSK 224

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN--W 240
            +  K  GV   V+  +      V+E +      GVD  ++  G       + + ++  W
Sbjct: 225 FEQAKKFGVTEFVNPKDHD--KPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW 282

Query: 241 GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK--IHRPHVLEDSLRELLLWAAK 298
           G  +L+ G    +       + L+   T+ G  +G YK     P+++E  +        K
Sbjct: 283 GVTVLL-GVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYM--------K 333

Query: 299 GLITI--HISHTYSPSEANLAF 318
             + +   I+H    SE N AF
Sbjct: 334 KELELEKFITHELPFSEINKAF 355

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV---ARGAEKIKFLKSLGVDHV---VDLSN 200
           G+V LV G A G+G+A  +     GA ++        AEK+      G   +    D+++
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 201 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK--ESLKLLNWGAQILVIGFAS 251
           E+ + S  E     +  G+D++    G   +       L +W   + +     
Sbjct: 61  EAQVQSAFE-QAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGH 112

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 39/165 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P +PG +  G    VG NV+ FK GD V                      C         
Sbjct: 61  PIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNS 120

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G ++  IV D      +P G    + A L  A  T +  + +         
Sbjct: 121 RSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGK 180

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVD 193
            L +   GG+G  AV+IGK  G  +  ++R +EK +  +  LG D
Sbjct: 181 RLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD 225

Length = 375

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	344
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.78
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.69
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.54
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.41
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.41
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.7
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.48
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.46
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.4
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.23
PLN02494	477	adenosylhomocysteinase	98.2
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.19
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.12
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.06
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.05
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.05
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.04
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.01
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.01
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.93
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.93
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.89
PRK08324	681	short chain dehydrogenase; Validated	97.86
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.84
PRK05993	277	short chain dehydrogenase; Provisional	97.82
PRK06198	260	short chain dehydrogenase; Provisional	97.79
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.78
PRK06182	273	short chain dehydrogenase; Validated	97.7
PRK05693	274	short chain dehydrogenase; Provisional	97.7
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.66
PRK08265	261	short chain dehydrogenase; Provisional	97.66
PRK12742	237	oxidoreductase; Provisional	97.66
PRK07109	334	short chain dehydrogenase; Provisional	97.65
PRK06139	330	short chain dehydrogenase; Provisional	97.63
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.62
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.6
PRK07806	248	short chain dehydrogenase; Provisional	97.54
PRK05872	296	short chain dehydrogenase; Provisional	97.53
PRK12939	250	short chain dehydrogenase; Provisional	97.52
PRK08177	225	short chain dehydrogenase; Provisional	97.52
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.52
PRK06128	300	oxidoreductase; Provisional	97.47
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.46
PRK08017	256	oxidoreductase; Provisional	97.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.43
PRK08339	263	short chain dehydrogenase; Provisional	97.42
PRK05866	293	short chain dehydrogenase; Provisional	97.41
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.41
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.39
PRK07060	245	short chain dehydrogenase; Provisional	97.39
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	97.39
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.38
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.38
PRK06484	520	short chain dehydrogenase; Validated	97.38
PLN03209	576	translocon at the inner envelope of chloroplast su	97.37
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.37
PRK07478	254	short chain dehydrogenase; Provisional	97.36
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.35
PRK07904	253	short chain dehydrogenase; Provisional	97.34
PRK06500	249	short chain dehydrogenase; Provisional	97.33
PRK06953	222	short chain dehydrogenase; Provisional	97.32
PRK07825	273	short chain dehydrogenase; Provisional	97.32
PLN02780	320	ketoreductase/ oxidoreductase	97.31
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.31
PRK06196	315	oxidoreductase; Provisional	97.3
PRK08862	227	short chain dehydrogenase; Provisional	97.29
PRK07814	263	short chain dehydrogenase; Provisional	97.29
PRK07062	265	short chain dehydrogenase; Provisional	97.29
PRK06057	255	short chain dehydrogenase; Provisional	97.28
PRK05867	253	short chain dehydrogenase; Provisional	97.28
PRK12829	264	short chain dehydrogenase; Provisional	97.28
PRK07832	272	short chain dehydrogenase; Provisional	97.26
KOG0725	270	consensus Reductases with broad range of substrate	97.26
PRK07831	262	short chain dehydrogenase; Provisional	97.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.24
PRK09072	263	short chain dehydrogenase; Provisional	97.23
PRK06949	258	short chain dehydrogenase; Provisional	97.23
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.23
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.23
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.23
PRK06720	169	hypothetical protein; Provisional	97.21
PLN02476	278	O-methyltransferase	97.21
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.21
PRK12747	252	short chain dehydrogenase; Provisional	97.2
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.2
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	97.2
PRK05854	313	short chain dehydrogenase; Provisional	97.19
PRK07576	264	short chain dehydrogenase; Provisional	97.19
PRK08267	260	short chain dehydrogenase; Provisional	97.18
COG4122	219	Predicted O-methyltransferase [General function pr	97.18
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.18
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.17
PRK06194	287	hypothetical protein; Provisional	97.17
PRK05876	275	short chain dehydrogenase; Provisional	97.17
PRK06180	277	short chain dehydrogenase; Provisional	97.16
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.16
PRK06841	255	short chain dehydrogenase; Provisional	97.15
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.14
PRK06114	254	short chain dehydrogenase; Provisional	97.14
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.14
PRK07890	258	short chain dehydrogenase; Provisional	97.13
PRK08303	305	short chain dehydrogenase; Provisional	97.13
PRK06181	263	short chain dehydrogenase; Provisional	97.13
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	97.13
PRK07677	252	short chain dehydrogenase; Provisional	97.11
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.11
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.1
PRK09291	257	short chain dehydrogenase; Provisional	97.1
PRK12937	245	short chain dehydrogenase; Provisional	97.1
PRK06172	253	short chain dehydrogenase; Provisional	97.1
PRK12367	245	short chain dehydrogenase; Provisional	97.09
PRK07063	260	short chain dehydrogenase; Provisional	97.09
PRK06101	240	short chain dehydrogenase; Provisional	97.09
PRK06125	259	short chain dehydrogenase; Provisional	97.08
PRK06197	306	short chain dehydrogenase; Provisional	97.08
PRK05717	255	oxidoreductase; Validated	97.07
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.06
PRK06701	290	short chain dehydrogenase; Provisional	97.06
PRK09186	256	flagellin modification protein A; Provisional	97.06
PRK08589	272	short chain dehydrogenase; Validated	97.06
PRK08643	256	acetoin reductase; Validated	97.05
PRK08628	258	short chain dehydrogenase; Provisional	97.05
PRK09242	257	tropinone reductase; Provisional	97.05
PRK10538	248	malonic semialdehyde reductase; Provisional	97.05
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.05
PRK07985	294	oxidoreductase; Provisional	97.05
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.04
PRK06484	520	short chain dehydrogenase; Validated	97.04
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.02
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.02
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.02
PRK07035	252	short chain dehydrogenase; Provisional	97.02
PRK04148	134	hypothetical protein; Provisional	97.02
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.02
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.01
PRK07774	250	short chain dehydrogenase; Provisional	97.01
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.01
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.0
PRK07856	252	short chain dehydrogenase; Provisional	97.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.0
PRK08251	248	short chain dehydrogenase; Provisional	97.0
PRK07024	257	short chain dehydrogenase; Provisional	96.99
PRK07326	237	short chain dehydrogenase; Provisional	96.99
PRK06138	252	short chain dehydrogenase; Provisional	96.99
PRK06179	270	short chain dehydrogenase; Provisional	96.99
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.97
PRK06482	276	short chain dehydrogenase; Provisional	96.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.96
PRK07454	241	short chain dehydrogenase; Provisional	96.96
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.96
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.95
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.95
PRK07791	286	short chain dehydrogenase; Provisional	96.95
CHL00194	317	ycf39 Ycf39; Provisional	96.95
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.95
PRK08264	238	short chain dehydrogenase; Validated	96.94
PRK07067	257	sorbitol dehydrogenase; Provisional	96.94
PRK06483	236	dihydromonapterin reductase; Provisional	96.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.93
PRK08226	263	short chain dehydrogenase; Provisional	96.92
PRK05650	270	short chain dehydrogenase; Provisional	96.92
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.92
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.92
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.91
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.89
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.89
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.89
PRK08278	273	short chain dehydrogenase; Provisional	96.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.88
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.87
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.87
PRK08703	239	short chain dehydrogenase; Provisional	96.86
PRK12828	239	short chain dehydrogenase; Provisional	96.85
PRK07775	274	short chain dehydrogenase; Provisional	96.84
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.84
PRK05875	276	short chain dehydrogenase; Provisional	96.84
PRK12743	256	oxidoreductase; Provisional	96.84
PRK05884	223	short chain dehydrogenase; Provisional	96.83
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.83
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.83
PRK08263	275	short chain dehydrogenase; Provisional	96.82
TIGR00438	188	rrmJ cell division protein FtsJ.	96.82
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.82
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.79
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.79
PLN02253	280	xanthoxin dehydrogenase	96.76
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.76
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.75
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.75
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.74
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.72
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.72
PRK06914	280	short chain dehydrogenase; Provisional	96.7
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.69
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.69
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.69
PRK06940	275	short chain dehydrogenase; Provisional	96.68
PRK07102	243	short chain dehydrogenase; Provisional	96.68
PRK06523	260	short chain dehydrogenase; Provisional	96.68
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.68
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.67
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.67
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.66
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.65
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.65
PLN02589	247	caffeoyl-CoA O-methyltransferase	96.64
KOG1208	314	consensus Dehydrogenases with different specificit	96.64
PRK07577	234	short chain dehydrogenase; Provisional	96.63
PRK07074	257	short chain dehydrogenase; Provisional	96.6
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.6
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.6
PRK06398	258	aldose dehydrogenase; Validated	96.59
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.59
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.58
PRK08219	227	short chain dehydrogenase; Provisional	96.58
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.57
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.55
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.54
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.54
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.52
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.52
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.51
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.49
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.49
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.48
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	96.47
COG2910	211	Putative NADH-flavin reductase [General function p	96.47
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.47
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.46
PRK05855	582	short chain dehydrogenase; Validated	96.46
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.45
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.44
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.43
PRK05599	246	hypothetical protein; Provisional	96.43
PRK05562	223	precorrin-2 dehydrogenase; Provisional	96.42
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.42
PRK07417	279	arogenate dehydrogenase; Reviewed	96.42
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.41
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.41
PRK12746	254	short chain dehydrogenase; Provisional	96.38
PRK07023	243	short chain dehydrogenase; Provisional	96.37
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.36
PRK07574	385	formate dehydrogenase; Provisional	96.35
PLN03139	386	formate dehydrogenase; Provisional	96.35
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.35
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.34
PRK09134	258	short chain dehydrogenase; Provisional	96.33
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.33
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	96.31
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.31
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.26
KOG1663	237	consensus O-methyltransferase [Secondary metabolit	96.26
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.25
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.25
PLN02366	308	spermidine synthase	96.24
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.23
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.23
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.22
PRK07201	657	short chain dehydrogenase; Provisional	96.21
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.2
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.18
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.17
PRK12744	257	short chain dehydrogenase; Provisional	96.17
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.17
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.16
PRK08655	437	prephenate dehydrogenase; Provisional	96.16
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.16
PRK07578	199	short chain dehydrogenase; Provisional	96.15
PRK06123	248	short chain dehydrogenase; Provisional	96.15
PRK13243	333	glyoxylate reductase; Reviewed	96.13
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.11
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.11
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.11
PRK13255	218	thiopurine S-methyltransferase; Reviewed	96.09
PRK07402	196	precorrin-6B methylase; Provisional	96.09
PRK09135	249	pteridine reductase; Provisional	96.09
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.07
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.07
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.07
PRK12827	249	short chain dehydrogenase; Provisional	96.06
PRK11207	197	tellurite resistance protein TehB; Provisional	96.04
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.02
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.02
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.99
PRK07041	230	short chain dehydrogenase; Provisional	95.99
PRK14967	223	putative methyltransferase; Provisional	95.98
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.96
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.96
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.93
PLN00015	308	protochlorophyllide reductase	95.92
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.92
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.92
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.92
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.91
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.9
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.89
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.88
PLN02653	340	GDP-mannose 4,6-dehydratase	95.87
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.86
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.82
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.81
COG1028	251	FabG Dehydrogenases with different specificities (	95.8
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.8
PRK08317	241	hypothetical protein; Provisional	95.8
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.8
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.79
PRK07069	251	short chain dehydrogenase; Validated	95.79
PRK08618	325	ornithine cyclodeaminase; Validated	95.78
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.76
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.76
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.76
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.74
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.74
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.7
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.66
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.65
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.65
PLN02214	342	cinnamoyl-CoA reductase	95.65
PRK01581	374	speE spermidine synthase; Validated	95.65
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.64
KOG1611	249	consensus Predicted short chain-type dehydrogenase	95.63
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.62
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.61
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.6
PLN03075	296	nicotianamine synthase; Provisional	95.6
PLN00016	378	RNA-binding protein; Provisional	95.6
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.59
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.59
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.57
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.49
PLN02244	340	tocopherol O-methyltransferase	95.48
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.46
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.45
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.42
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.4
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.38
PRK10637	457	cysG siroheme synthase; Provisional	95.36
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.35
PRK00536	262	speE spermidine synthase; Provisional	95.33
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.33
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.31
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.31
PRK06924	251	short chain dehydrogenase; Provisional	95.31
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.28
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	95.27
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.26
PLN02928	347	oxidoreductase family protein	95.26
PLN00203	519	glutamyl-tRNA reductase	95.26
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.25
PRK00811	283	spermidine synthase; Provisional	95.25
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	95.23
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.21
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.18
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.13
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.13
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.12
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.12
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.11
PRK10669	558	putative cation:proton antiport protein; Provision	95.09
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.06
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.06
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.05
PLN02686	367	cinnamoyl-CoA reductase	95.05
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.05
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.02

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.2e-58  Score=398.98  Aligned_cols=303  Identities=34%  Similarity=0.558  Sum_probs=276.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++++           +.+++++.|+ |+++||+|+|.|+|+|++|+|...|.++.. .+|++||||.+|+|+
T Consensus         4 mkA~~~~~~~~p-----------l~i~e~~~p~-p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~   70 (339)
T COG1064           4 MKAAVLKKFGQP-----------LEIEEVPVPE-PGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVV   70 (339)
T ss_pred             eEEEEEccCCCC-----------ceEEeccCCC-CCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEE
Confidence            899999999986           5668999999 799999999999999999999999998764 499999999999999


Q ss_pred             EeCCCCCCCCCCCEEE----------------------------EecCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++|++|++||||-                            ++..+|+|+||+++++   +++|+++++++||.+.|
T Consensus        71 ~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC  150 (339)
T COG1064          71 EVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC  150 (339)
T ss_pred             EecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence            9999999999999992                            3445699999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      .+.|.|++| ...+++|+++|+|+|. |++|.+++|+|+.+|++|++++++++|++.++++|++++++.++.+.   .+.
T Consensus       151 aGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~---~~~  225 (339)
T COG1064         151 AGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDA---LEA  225 (339)
T ss_pred             CeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchh---hHH
Confidence            999999999 4599999999999999 89999999999999999999999999999999999999999876555   333


Q ss_pred             HHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC-CCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                      +.+     .+|+++||++...++.++++|+++|+++.+|... +.....+...++.+++++.|+..++         ..+
T Consensus       226 ~~~-----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---------~~d  291 (339)
T COG1064         226 VKE-----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---------RAD  291 (339)
T ss_pred             hHh-----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---------HHH
Confidence            322     2999999999778999999999999999999985 5556677778899999999999888         589


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +++++++..+|++++.+.+.++++++++|++.|.+++..|+.||.++
T Consensus       292 ~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         292 LEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            99999999999999998789999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=9.6e-55  Score=384.43  Aligned_cols=318  Identities=39%  Similarity=0.562  Sum_probs=281.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++.++.         +..+++|.|+ |+++||+|||.++++|+.|+..+.|......++|+++|.|++|+|+
T Consensus         1 mka~~~~~~g~~~~---------l~~~e~~~P~-p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~   70 (326)
T COG0604           1 MKAVVVEEFGGPEV---------LKVVEVPEPE-PGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVV   70 (326)
T ss_pred             CeEEEEeccCCCce---------eEEEecCCCC-CCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEE
Confidence            99999999999864         7788999999 7999999999999999999999998744445689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                      ++|+++++|++||||+...   .+|+|+||+.+++   +++|+++|+++||+++..++|||+++....+++++++|||+|
T Consensus        71 avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g  150 (326)
T COG0604          71 AVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG  150 (326)
T ss_pred             EeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence            9999999999999999986   6799999999999   999999999999999999999999999989999999999999


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHH
Q 019196          155 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  234 (344)
Q Consensus       155 ~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (344)
                      |+|++|.+++|+||.+|+.+++++.++++.++++++|+++++++.+.++   .+.+.+.+++.++|+|||++|++.+..+
T Consensus       151 aaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~---~~~v~~~t~g~gvDvv~D~vG~~~~~~~  227 (326)
T COG0604         151 AAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDF---VEQVRELTGGKGVDVVLDTVGGDTFAAS  227 (326)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccH---HHHHHHHcCCCCceEEEECCCHHHHHHH
Confidence            9999999999999999988777777888888999999999999999888   7777888888899999999999999999


Q ss_pred             HhcccCCCEEEEEeccCC-CCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhh
Q 019196          235 LKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  313 (344)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~  313 (344)
                      +.+++++|+++.+|..++ .....+...++.+.++..+......   .++...+.++++.+++.+|.+++.++.+|++++
T Consensus       228 l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e  304 (326)
T COG0604         228 LAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DPEALAEALAELFDLLASGKLKPVIDRVYPLAE  304 (326)
T ss_pred             HHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---chHHHHHHHHHHHHHHHcCCCcceeccEechhh
Confidence            999999999999999884 3333444556778888888776543   336667899999999999999999999999999


Q ss_pred             HHHHHHHHHc-CCcceeEEEEe
Q 019196          314 ANLAFSAIED-RKVIGKVMIAF  334 (344)
Q Consensus       314 ~~ea~~~~~~-~~~~gkvvi~~  334 (344)
                      ..++...... ++..||+|+++
T Consensus       305 ~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         305 APAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             hHHHHHHHHcccCCcceEEEeC
Confidence            6555543333 58899999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.1e-53  Score=340.98  Aligned_cols=322  Identities=33%  Similarity=0.446  Sum_probs=299.3

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      |-+++++.|+.++         +.+++.|.|+ |+|+|..||.+|+|+|..|..+..|.|. ..+.|++||.|.+|+|+.
T Consensus        10 k~i~v~e~Ggydv---------lk~ed~pv~~-papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvA   78 (336)
T KOG1197|consen   10 KCIVVTEFGGYDV---------LKLEDRPVPP-PAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVA   78 (336)
T ss_pred             eEEEEeccCCcce---------EEEeeecCCC-CCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEE
Confidence            5688999999876         8899999999 7999999999999999999999999985 468899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh
Q 019196           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  158 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  158 (344)
                      +|++++++++||||.-+.+.|.|+|+..+|.   +++|+.+++.+||++...++|||.-+++..++++|++||++.++|+
T Consensus        79 vG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGG  158 (336)
T KOG1197|consen   79 VGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGG  158 (336)
T ss_pred             ecCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccc
Confidence            9999999999999999999999999999998   9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcc
Q 019196          159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  238 (344)
Q Consensus       159 ~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (344)
                      +|++++|++|..|++++.+.++.+|.+.+++.|+.+.++++.+++   .+++.+.++++|+|+++|.+|.+.+..++.+|
T Consensus       159 VGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~---v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L  235 (336)
T KOG1197|consen  159 VGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDY---VDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL  235 (336)
T ss_pred             HHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhH---HHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence            999999999999999999999999999999999999999999999   88888899999999999999999999999999


Q ss_pred             cCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHH
Q 019196          239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  318 (344)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~  318 (344)
                      ++.|.+|++|+.++....++++++..+.+++.-..+..+. ..+.++.....+++.++-+|.+++.+.++|||+++.+|+
T Consensus       236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi-~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~  314 (336)
T KOG1197|consen  236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYI-DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH  314 (336)
T ss_pred             ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhccc-CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence            9999999999999888888999988888887766544432 245566678889999999999999999999999999999


Q ss_pred             HHHHcCCcceeEEEEecCCC
Q 019196          319 SAIEDRKVIGKVMIAFDDMK  338 (344)
Q Consensus       319 ~~~~~~~~~gkvvi~~~~~~  338 (344)
                      ..++++.+.||+++...+++
T Consensus       315 ~diesrktvGkvlLlp~~~~  334 (336)
T KOG1197|consen  315 ADIESRKTVGKVLLLPGPEK  334 (336)
T ss_pred             HHHHhhhccceEEEeCCccc
Confidence            99999999999999987764

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-50  Score=338.51  Aligned_cols=310  Identities=25%  Similarity=0.359  Sum_probs=264.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCC--CCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK--PPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~   78 (344)
                      |+|+++.+.++++            +++.|.|+++.|+||+|++.+.|||++|+|.+.......  ...|.++|||.+|+
T Consensus         5 ~~A~vl~g~~di~------------i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGi   72 (354)
T KOG0024|consen    5 NLALVLRGKGDIR------------IEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGI   72 (354)
T ss_pred             cceeEEEccCcee------------EeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccc
Confidence            7899999999864            479999998899999999999999999999997654332  24699999999999


Q ss_pred             EEEeCCCCCCCCCCCEEE------------------------Eec----CCCceeeEEeecc---cCCCCCCCHHHHhhc
Q 019196           79 VDAVGPNVSNFKVGDTVC------------------------GFA----ALGSFAQFIVADQ---FPVPKGCDLLAAAAL  127 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~------------------------~~~----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l  127 (344)
                      |.++|++|+++++||||.                        .++    -+|++++|++.++   +|+||++|++++|.+
T Consensus        73 V~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~  152 (354)
T KOG0024|consen   73 VEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALI  152 (354)
T ss_pred             hhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence            999999999999999993                        111    2399999999998   999999999999955


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                       .+++++|||. .+++++++++|||+|+ |++|+++...||.+|+ +|++++..+.|++.++++|++.+.+....+..+.
T Consensus       153 -ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~  229 (354)
T KOG0024|consen  153 -EPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQE  229 (354)
T ss_pred             -cchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHH
Confidence             7899999998 7899999999999999 9999999999999999 8999999999999999999998887666553233


Q ss_pred             HHHHHHHh-cCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchh
Q 019196          207 VKEFLKAR-KLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV  284 (344)
Q Consensus       207 ~~~~~~~~-~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (344)
                      ..+..+.. +...+|+.|||+|. ..++.++..++.+|+++++|+-.... .++......+++.+.|++.+.        
T Consensus       230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~-~fpi~~v~~kE~~~~g~fry~--------  300 (354)
T KOG0024|consen  230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEI-QFPIIDVALKEVDLRGSFRYC--------  300 (354)
T ss_pred             HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCcc-ccChhhhhhheeeeeeeeeec--------
Confidence            33333333 33569999999997 56788999999999999888766544 477788899999999988655        


Q ss_pred             HHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCc-ceeEEEEec
Q 019196          285 LEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKV-IGKVMIAFD  335 (344)
Q Consensus       285 ~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~-~gkvvi~~~  335 (344)
                       +.++..+++++++|+++  +++++.|+++++.|||+.+.+++. .-|+++..+
T Consensus       301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence             35899999999999998  479999999999999999998774 338887654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-48  Score=324.95  Aligned_cols=307  Identities=25%  Similarity=0.378  Sum_probs=262.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ++|.+..+++...         ....+++.|+ |+++||+|+|.|+|||++|+|.+.|.++. ..+|.++|||.+|+|++
T Consensus        11 ~g~~~~~~~G~l~---------p~~~~~~~~~-~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~Vvk   79 (360)
T KOG0023|consen   11 FGWAARDPSGVLS---------PEVFSFPVRE-PGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVK   79 (360)
T ss_pred             EEEEEECCCCCCC---------cceeEcCCCC-CCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEE
Confidence            4677777666422         2336889999 79999999999999999999999999987 78999999999999999


Q ss_pred             eCCCCCCCCCCCEEE------------------------------EecCC-----CceeeEEeecc---cCCCCCCCHHH
Q 019196           82 VGPNVSNFKVGDTVC------------------------------GFAAL-----GSFAQFIVADQ---FPVPKGCDLLA  123 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~------------------------------~~~~~-----g~~~~~~~~~~---~~~P~~~~~~~  123 (344)
                      +|+++++|++||||-                              ++..+     |+|++|+++++   ++||++++.++
T Consensus        80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~  159 (360)
T KOG0023|consen   80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS  159 (360)
T ss_pred             ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence            999999999999991                              12222     66999999999   99999999999


Q ss_pred             HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHHHhcCCcEEEeCC-CC
Q 019196          124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLS-NE  201 (344)
Q Consensus       124 aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~v~~~~-~~  201 (344)
                      ||.+.|++.|.|.+| ...++.||+++-|.|+ |++|.+++|+||++|.+|++++++. +|.+.++.||++..++.. +.
T Consensus       160 aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~  237 (360)
T KOG0023|consen  160 AAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP  237 (360)
T ss_pred             ccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence            999999999999999 6788999999999999 7799999999999999999999997 455666889999988876 55


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  281 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (344)
                      +.   .+++.+.++ .++|-+.+. ....++.++.+++++|++|++|.+..+. .++...+..+.+++.|+..++     
T Consensus       238 d~---~~~~~~~~d-g~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~~~-~~~~~~lil~~~~I~GS~vG~-----  306 (360)
T KOG0023|consen  238 DI---MKAIMKTTD-GGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEKPL-KLDTFPLILGRKSIKGSIVGS-----  306 (360)
T ss_pred             HH---HHHHHHhhc-Ccceeeeec-cccchHHHHHHhhcCCEEEEEeCcCCcc-cccchhhhcccEEEEeecccc-----
Confidence            55   555555543 345555554 3467889999999999999999988743 366667789999999999988     


Q ss_pred             chhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          282 PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       282 ~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                          ..+.++++++.+++.++..+ +..+++++++||+.|.+++..+|.|+.++.+
T Consensus       307 ----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~~  357 (360)
T KOG0023|consen  307 ----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSKS  357 (360)
T ss_pred             ----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEcccc
Confidence                58899999999999999776 6889999999999999999999999998764

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.8e-47  Score=346.72  Aligned_cols=315  Identities=25%  Similarity=0.375  Sum_probs=265.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|++.-  .+ .+..+.++++|.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         1 mka~~~~~~g~~~~--~~-~~~~l~~~~~~~P~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~GhE~~G~V~   74 (371)
T cd08281           1 MRAAVLRETGAPTP--YA-DSRPLVIEEVELDP-PGPGEVLVKIAAAGLCHSDLSVINGDRP--RPLPMALGHEAAGVVV   74 (371)
T ss_pred             CcceEEEecccccc--cc-cCCCceEEEeecCC-CCCCeEEEEEEEEeeCccchHhhcCCCC--CCCCccCCccceeEEE
Confidence            99999999886310  00 01126668899999 6999999999999999999999988653  3468999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC------------------------------------------------CCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFAA------------------------------------------------LGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~  112 (344)
                      ++|++++++++||||++...                                                .|+|+||+.++.
T Consensus        75 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~  154 (371)
T cd08281          75 EVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSR  154 (371)
T ss_pred             EeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecc
Confidence            99999999999999975310                                                268999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++|+.++++++|||+++...++++++++|||.|+ |++|++++|+|+..|+ +|++++++++|++.++
T Consensus       155 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~  233 (371)
T cd08281         155 RSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR  233 (371)
T ss_pred             cceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence               9999999999999999999999999878889999999999987 9999999999999999 6999999999999999


Q ss_pred             hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccc
Q 019196          189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKN  266 (344)
Q Consensus       189 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  266 (344)
                      ++|+++++++.+.++   .+++.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.++
T Consensus       234 ~~Ga~~~i~~~~~~~---~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  309 (371)
T cd08281         234 ELGATATVNAGDPNA---VEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE  309 (371)
T ss_pred             HcCCceEeCCCchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence            999999998877665   5555556655 89999999986 5788899999999999999976532 2234555678899


Q ss_pred             eEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      +++.|++.+.+.      ..+.++++++++++|++++  .++++|+|+|+++||+.+.+++..+|+++
T Consensus       310 ~~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         310 RTLKGSYMGSCV------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             CEEEEEecCCCC------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            999998765431      1356888999999999985  58899999999999999999998877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2e-47  Score=322.11  Aligned_cols=307  Identities=27%  Similarity=0.389  Sum_probs=268.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      +||+++++.++|           +.++++.++. |+++||+||+.++|+|++|.+..+|..+.  .+|.++|||.+|+|+
T Consensus         3 ~~aAV~~~~~~P-----------l~i~ei~l~~-P~~gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHEgAGiVe   68 (366)
T COG1062           3 TRAAVAREAGKP-----------LEIEEVDLDP-PRAGEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVE   68 (366)
T ss_pred             ceEeeeecCCCC-----------eEEEEEecCC-CCCCeEEEEEEEeeccccchhhhcCCCCC--CCceecccccccEEE
Confidence            589999999988           7788999998 79999999999999999999999998874  499999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------------------------C--CCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------------------------A--LGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------------------------~--~g~~~~~~~~~~  112 (344)
                      +||++|+.+++||.|+...                                              .  .++|++|.++++
T Consensus        69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~  148 (366)
T COG1062          69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE  148 (366)
T ss_pred             EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence            9999999999999994110                                              0  149999999999


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         ++++++.+++.++.+.|...|.+-+..+.++++++++|.|.|. |++|++++|-|+..|+ +|++++.+++|+++++
T Consensus       149 ~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~  227 (366)
T COG1062         149 ISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK  227 (366)
T ss_pred             cceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence               9999999999999999999999999999999999999999999 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhcc
Q 019196          189 SLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVK  265 (344)
Q Consensus       189 ~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~  265 (344)
                      +||+.+.+|..+.. .   .+.+...+++ |+|++|||+|. ..+++++.++.++|+.+.+|..... ..+.+..++...
T Consensus       228 ~fGAT~~vn~~~~~~v---v~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g  303 (366)
T COG1062         228 KFGATHFVNPKEVDDV---VEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG  303 (366)
T ss_pred             hcCCceeecchhhhhH---HHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence            99999999987763 4   5555566654 99999999997 6789999999999999999987643 222444454444


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                       .++.|++++....      +.++..++++..+|++..  ++++.++|+|++|||+.|.+++.+ |.||.|
T Consensus       304 -r~~~Gs~~G~~~p------~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~  366 (366)
T COG1062         304 -RVWKGSAFGGARP------RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF  366 (366)
T ss_pred             -ceEEEEeecCCcc------ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence             8999999876432      367899999999999984  799999999999999999999987 666653

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=3.3e-46  Score=336.24  Aligned_cols=304  Identities=25%  Similarity=0.395  Sum_probs=258.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.            +.+++++.|+ |+++||+||+.++++|++|++.+.+.+......|.++|||++|+|+
T Consensus         1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~   67 (339)
T cd08239           1 MRGAVFPGDRT------------VELREFPVPV-PGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVV   67 (339)
T ss_pred             CeEEEEecCCc------------eEEEecCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEE
Confidence            99999986654            4457899999 6999999999999999999998877643223357899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++++++++||+|+...                            .+|+|++|+.++.   +++|+++++++|+++++
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~  147 (339)
T cd08239          68 AVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLC  147 (339)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcc
Confidence            9999999999999997542                            2589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      +++|||+++ ..+.++++++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++++|++.++++++.+    .+
T Consensus       148 ~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~----~~  221 (339)
T cd08239         148 GIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD----VQ  221 (339)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch----HH
Confidence            999999998 5678899999999987 99999999999999998 99999999999999999999998876543    34


Q ss_pred             HHHHHhcCCCccEEEeCCChhh-HHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          209 EFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      .+.+.+.+.++|++|||+|+.. +..++++++++|+++.+|..... .......++.+++++.|++..+         .+
T Consensus       222 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~  291 (339)
T cd08239         222 EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFS---------VP  291 (339)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCC---------HH
Confidence            4555566678999999999864 47889999999999999976532 2222345678999999987544         36


Q ss_pred             HHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          288 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++++++++.+|++++  .++++|+++++++||+.+.++. .||+|+++
T Consensus       292 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         292 DMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            7889999999999874  6889999999999999998875 68999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.3e-45  Score=330.15  Aligned_cols=316  Identities=24%  Similarity=0.365  Sum_probs=264.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.+..      -..+.++++|.|+ |+++||+|++.++++|++|++...|.++....+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~~~------~~~~~~~~~~~p~-~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~   73 (324)
T cd08291           1 MKALLLEEYGKPLE------VKELSLPEPEVPE-PGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVV   73 (324)
T ss_pred             CeEEEEeecCCCcc------ccEEEecccCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEE
Confidence            99999999886410      0115567899999 6999999999999999999999888765444578999999999999


Q ss_pred             EeCCCCCC-CCCCCEEEEecC-CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe-c
Q 019196           81 AVGPNVSN-FKVGDTVCGFAA-LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL-G  154 (344)
Q Consensus        81 ~~g~~~~~-~~~Gd~V~~~~~-~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~-g  154 (344)
                      ++|+++.+ |++||+|+++.. +|+|++|+.++.   +++|++++++++++++..+.|||..+ ...+. ++++++|+ +
T Consensus        74 ~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~  151 (324)
T cd08291          74 AAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTA  151 (324)
T ss_pred             EECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEcc
Confidence            99999986 999999998754 389999999998   99999999999998888999998544 55555 45566666 7


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHH
Q 019196          155 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  234 (344)
Q Consensus       155 ~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (344)
                      ++|++|++++|+|+.+|++|+++++++++++.++++|+++++++...++   .+.+.+.+.+.++|++|||+|+......
T Consensus       152 g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~v~~~~~~~~~d~vid~~g~~~~~~~  228 (324)
T cd08291         152 AASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDF---LEDLKELIAKLNATIFFDAVGGGLTGQI  228 (324)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccH---HHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence            8899999999999999999999999999999999999999999887666   5566666777789999999999888888


Q ss_pred             HhcccCCCEEEEEeccCCCCC-CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhh
Q 019196          235 LKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  313 (344)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~  313 (344)
                      +.+++++|+++.+|...+... ..+...++.+++++.++....+....   ..+.+++++++++ +.+++.++++|+|+|
T Consensus       229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~i~~~~~l~~  304 (324)
T cd08291         229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL---GPEVVKKLKKLVK-TELKTTFASRYPLAL  304 (324)
T ss_pred             HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc---CHHHHHHHHHHHh-CccccceeeEEcHHH
Confidence            999999999999997654322 24445567899999998865543221   2467888888888 999999999999999


Q ss_pred             HHHHHHHHHcCCcceeEEE
Q 019196          314 ANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       314 ~~ea~~~~~~~~~~gkvvi  332 (344)
                      +++||+.+.+++..||+++
T Consensus       305 ~~~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         305 TLEAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             HHHHHHHHHhCCCCCeEEe
Confidence            9999999999999999987

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=7.9e-46  Score=335.73  Aligned_cols=308  Identities=23%  Similarity=0.355  Sum_probs=262.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+           +.++++|.|. |+++||+|||.++++|++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         2 mka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e~~G~V~   67 (358)
T TIGR03451         2 VRGVIARSKGAP-----------VELETIVVPD-PGPGEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHEAAGVVE   67 (358)
T ss_pred             cEEEEEccCCCC-----------CEEEEEECCC-CCCCeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccceEEEEE
Confidence            999999998875           4567899999 6999999999999999999999888653  2468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------------------cCCCceeeEEeecc---cCCCC
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------------------AALGSFAQFIVADQ---FPVPK  117 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------------------~~~g~~~~~~~~~~---~~~P~  117 (344)
                      ++|+++++|++||+|+..                                        ...|+|+||+.++.   +++|+
T Consensus        68 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~  147 (358)
T TIGR03451        68 AVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDP  147 (358)
T ss_pred             EeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCC
Confidence            999999999999999751                                        02489999999998   99999


Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEE
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV  196 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~  196 (344)
                      ++++++|+.+++.+.++|+++...++++++++|||+|+ |++|++++|+|+..|+ +|++++++++|++.++++|++.++
T Consensus       148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i  226 (358)
T TIGR03451       148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV  226 (358)
T ss_pred             CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            99999999999999999998877888999999999987 9999999999999999 499999999999999999999999


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEe
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYW  274 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  274 (344)
                      ++.+.++   .+.+.+.+.+.++|++|||+|. ..+..++.+++++|+++.+|..... ...++...++.+++++.+++.
T Consensus       227 ~~~~~~~---~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~  303 (358)
T TIGR03451       227 NSSGTDP---VEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY  303 (358)
T ss_pred             cCCCcCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence            8877665   5556666777789999999996 5778899999999999999976542 123444567788999988764


Q ss_pred             ccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          275 GSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +...   +   .+.++++++++++|++++  .++++|+++|+++|++.+.+++.. |+++.
T Consensus       304 ~~~~---~---~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       304 GDCL---P---ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             CCCC---c---HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            3211   1   366888999999999975  589999999999999999888765 77764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=3.7e-45  Score=333.66  Aligned_cols=309  Identities=21%  Similarity=0.355  Sum_probs=257.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++++           +.+++++.|. |+++||+|||.++++|++|++.+.|.++....+|+++|||++|+|+
T Consensus        11 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~   78 (381)
T PLN02740         11 CKAAVAWGPGEP-----------LVMEEIRVDP-PQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVE   78 (381)
T ss_pred             eEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEE
Confidence            899999887753           3457899998 6999999999999999999999988764444678999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------------------------------CCCceeeEEe
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------------------------------ALGSFAQFIV  109 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------------------------------~~g~~~~~~~  109 (344)
                      ++|+++++|++||||++..                                                   .+|+|+||++
T Consensus        79 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~  158 (381)
T PLN02740         79 SVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTV  158 (381)
T ss_pred             EeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEE
Confidence            9999999999999997531                                                   1489999999


Q ss_pred             ecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHH
Q 019196          110 ADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK  185 (344)
Q Consensus       110 ~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~  185 (344)
                      ++.   +++|+++++++++.+++.+.|||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++|++
T Consensus       159 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~  237 (381)
T PLN02740        159 LDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE  237 (381)
T ss_pred             EehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence            998   9999999999999999999999999877889999999999997 9999999999999999 6999999999999


Q ss_pred             HHHhcCCcEEEeCCCCC--chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCC-CCcchh
Q 019196          186 FLKSLGVDHVVDLSNES--VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPAN  260 (344)
Q Consensus       186 ~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~  260 (344)
                      .++++|++.+++..+.+  +   .+.+.+.+.+ ++|++|||+|. ..+..++.+++++ |+++.+|...... ..++..
T Consensus       238 ~a~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~  313 (381)
T PLN02740        238 KGKEMGITDFINPKDSDKPV---HERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPM  313 (381)
T ss_pred             HHHHcCCcEEEecccccchH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHH
Confidence            99999999998876532  3   3445555555 89999999997 5778899999996 9999999765431 112222


Q ss_pred             hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          261 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      . +.+++++.|+..+.+..      ...+.++++++.+|++++  .++++|+|+|+++|++.+.+++.. |++|+.
T Consensus       314 ~-~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~  381 (381)
T PLN02740        314 E-LFDGRSITGSVFGDFKG------KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL  381 (381)
T ss_pred             H-HhcCCeEEEEecCCCCc------HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence            2 34688898887654321      246889999999999875  588999999999999999888764 988863

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=7.9e-45  Score=330.58  Aligned_cols=306  Identities=23%  Similarity=0.325  Sum_probs=256.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.           +.++++|.|. |+++||+|||.++++|++|++.+.+..    .+|+++|||++|+|+
T Consensus        13 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~   76 (378)
T PLN02827         13 CRAAVAWGAGEA-----------LVMEEVEVSP-PQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVE   76 (378)
T ss_pred             eEEEEEecCCCC-----------ceEEEeecCC-CCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEE
Confidence            899999876643           4557899999 699999999999999999999887642    357899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC------------------------------------------------CCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFAA------------------------------------------------LGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||+|++...                                                .|+|+||+.+++
T Consensus        77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~  156 (378)
T PLN02827         77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS  156 (378)
T ss_pred             EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence            99999999999999986521                                                279999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++++.+++.+.++|+++...++++++++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++
T Consensus       157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~  235 (378)
T PLN02827        157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK  235 (378)
T ss_pred             hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence               9999999999999998899999988877788999999999997 9999999999999999 5788888999999999


Q ss_pred             hcCCcEEEeCCCC--CchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCC-CEEEEEeccCCCCCCcchhhhhc
Q 019196          189 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGEIPVIPANIALV  264 (344)
Q Consensus       189 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  264 (344)
                      ++|++.++++.+.  ++   .+.+.+.+.+ ++|++|||+|.+ .+..++++++++ |+++.+|.............++.
T Consensus       236 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~  311 (378)
T PLN02827        236 TFGVTDFINPNDLSEPI---QQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL  311 (378)
T ss_pred             HcCCcEEEcccccchHH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence            9999999887642  23   3334445554 899999999974 688899999998 99999998754332222234678


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          265 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +++++.|+....+.      ....++++++++++|++++  .++++|+|+++++|++.+.+++. +|+||.+
T Consensus       312 ~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        312 SGRTLKGSLFGGWK------PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             cCceEEeeecCCCc------hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence            99999998764431      1356788999999999997  78999999999999999998876 5999875

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-44  Score=322.44  Aligned_cols=296  Identities=23%  Similarity=0.296  Sum_probs=248.6

Q ss_pred             eEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEe
Q 019196            3 ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAV   82 (344)
Q Consensus         3 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~   82 (344)
                      |+.+..+|.+.       ...+.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ...|.++|||++|+|+++
T Consensus         1 ~~~~~~~g~~~-------~~~l~~~~~p~P~-~~~~evlVkv~~~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~v   71 (329)
T TIGR02822         1 AWEVERPGPIE-------DGPLRFVERPVPR-PGPGELLVRVRACGVCRTDLHVSEGDLPV-HRPRVTPGHEVVGEVAGR   71 (329)
T ss_pred             CeeeecCCcCC-------CCCceEEeCCCCC-CCCCeEEEEEEEEeecchhHHHHcCCCCC-CCCCccCCcceEEEEEEE
Confidence            45566666542       1226678999999 69999999999999999999999887643 234789999999999999


Q ss_pred             CCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccchH
Q 019196           83 GPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAF  131 (344)
Q Consensus        83 g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~  131 (344)
                      |++++++++||+|+..                            ..+|+|+||+.++.   +++|+++++++++.+++.+
T Consensus        72 G~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~  151 (329)
T TIGR02822        72 GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAG  151 (329)
T ss_pred             CCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccc
Confidence            9999999999999631                            12589999999998   9999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHH
Q 019196          132 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       132 ~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~  211 (344)
                      .|||+++. .++++++++|||+|+ |++|++++|+|+.+|++|++++++++|+++++++|++++++..+..         
T Consensus       152 ~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~---------  220 (329)
T TIGR02822       152 IIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP---------  220 (329)
T ss_pred             hHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC---------
Confidence            99999984 688999999999998 9999999999999999999999999999999999999988753221         


Q ss_pred             HHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          212 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                          ..++|+++++.+. ..+..++++++++|+++.+|...+....++...++.+++++.++....         .+.+.
T Consensus       221 ----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~  287 (329)
T TIGR02822       221 ----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT---------RADAR  287 (329)
T ss_pred             ----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC---------HHHHH
Confidence                1368999988764 677889999999999999997544333345556678888988876432         35678


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++++++++|++++ ++++|+|+|+++||+.+.+++..||+|+
T Consensus       288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            8899999999975 5789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.3e-44  Score=321.42  Aligned_cols=320  Identities=28%  Similarity=0.391  Sum_probs=273.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++++.        ..+.++++|.|. +.++||+|+|.++++|+.|+..+.|.++.....|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~   71 (324)
T cd08292           1 MRAAVHTQFGDPA--------DVLEIGEVPKPT-PGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVD   71 (324)
T ss_pred             CeeEEEccCCChh--------HeEEEeecCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEE
Confidence            9999998887641        125668899999 5999999999999999999999888765334568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|++++++++||+|+++...|+|++|+.++.   +++|+++++++++.++..+.+||+++ ..++++++++|||+|++|
T Consensus        72 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g  150 (324)
T cd08292          72 AVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGG  150 (324)
T ss_pred             EeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEccccc
Confidence            99999999999999999875699999999998   99999999999999999999999988 568899999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      .+|++++++|+.+|+++++++++.++.+.++++|++.+++..+.++   ...+.+.+.+.++|++|||+|+.....++++
T Consensus       151 ~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~  227 (324)
T cd08292         151 AVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGW---QDKVREAAGGAPISVALDSVGGKLAGELLSL  227 (324)
T ss_pred             HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchH---HHHHHHHhCCCCCcEEEECCCChhHHHHHHh
Confidence            9999999999999999999999999888888899988888776666   5566777888899999999999888889999


Q ss_pred             ccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC-chhHHHHHHHHHHHHHCCceeEeeeeeechhhHHH
Q 019196          238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  316 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~e  316 (344)
                      ++++|+++.+|...+.....+....+.++.++.++....+.... |....+.++.+++++.+|.+++.+.+.|+++++.+
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~  307 (324)
T cd08292         228 LGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAK  307 (324)
T ss_pred             hcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHH
Confidence            99999999999753322223334456789999998876544333 55556789999999999999866778999999999


Q ss_pred             HHHHHHcCCcceeEEEE
Q 019196          317 AFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       317 a~~~~~~~~~~gkvvi~  333 (344)
                      |++.+.++...+|++++
T Consensus       308 a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         308 AAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHcCCCCceEEeC
Confidence            99999988888898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3.1e-44  Score=326.09  Aligned_cols=310  Identities=23%  Similarity=0.344  Sum_probs=251.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++...+..           +.++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         2 ~~a~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~   68 (368)
T TIGR02818         2 SRAAVAWAAGQP-----------LKIEEVDVEM-PQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVE   68 (368)
T ss_pred             ceEEEEecCCCC-----------eEEEEecCCC-CCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEE
Confidence            899999887653           4557899999 69999999999999999999999887642 3578999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||||+...                                                ..|+|+||+.++.
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~  148 (368)
T TIGR02818        69 AVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPE  148 (368)
T ss_pred             EECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEech
Confidence            9999999999999997542                                                0268999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++++++++++.|||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|++++.++++++.++
T Consensus       149 ~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~  227 (368)
T TIGR02818       149 ISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK  227 (368)
T ss_pred             hheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence               9999999999999999999999999877889999999999987 9999999999999999 7999999999999999


Q ss_pred             hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCC-CCcchhhhhcc
Q 019196          189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPANIALVK  265 (344)
Q Consensus       189 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~  265 (344)
                      ++|++.++++.+.+. ...+.+.+.+.+ ++|++|||+|. ..+..++++++++ |+++.+|...... .......++ +
T Consensus       228 ~~Ga~~~i~~~~~~~-~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~  304 (368)
T TIGR02818       228 KLGATDCVNPNDYDK-PIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-T  304 (368)
T ss_pred             HhCCCeEEcccccch-hHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-c
Confidence            999999988664211 113445555554 89999999996 5678899999886 9999999764221 112222222 2


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +..+.++..+...      ....+.++++++++|+++  +.+++.|+|+|+++|++.+.+++. .|+++++
T Consensus       305 ~~~~~g~~~~~~~------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       305 GRVWRGSAFGGVK------GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             cceEEEeeccCCC------cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            3446665443211      135688999999999986  468999999999999999988765 5998875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4e-45  Score=303.18  Aligned_cols=311  Identities=23%  Similarity=0.359  Sum_probs=264.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++.++++.|           +.+|++..+. |+.+||+||+.++++|++|...+.|..+ ...+|+++|||.+|+|+
T Consensus         8 CKAAV~w~a~~P-----------L~IEei~V~p-Pka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVE   74 (375)
T KOG0022|consen    8 CKAAVAWEAGKP-----------LVIEEIEVAP-PKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVE   74 (375)
T ss_pred             EeEeeeccCCCC-----------eeEEEEEeCC-CCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEE
Confidence            689999999998           8899999887 7999999999999999999999998763 35689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC-------------------------------------------------CCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGFAA-------------------------------------------------LGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~  111 (344)
                      ++|.+|+++++||+|+++..                                                 ..+|+||.+++
T Consensus        75 SvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~  154 (375)
T KOG0022|consen   75 SVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVD  154 (375)
T ss_pred             EecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEee
Confidence            99999999999999952210                                                 04999999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      .   ++++++.+++.++.+.+..+|+|-|....+++++|++|.|.|. |++|+++++-||..|+ ++++++-+++|.+.+
T Consensus       155 ~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a  233 (375)
T KOG0022|consen  155 DISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKA  233 (375)
T ss_pred             cceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHH
Confidence            9   9999999999999999999999999999999999999999999 9999999999999999 999999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCCCcchhhhhcc
Q 019196          188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVK  265 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  265 (344)
                      +++|+.+.+|..+.  .+.+.+.+....+.|+|+.|||+|. +.+.+++.+...+ |+-+.+|..............+..
T Consensus       234 k~fGaTe~iNp~d~--~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~  311 (375)
T KOG0022|consen  234 KEFGATEFINPKDL--KKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT  311 (375)
T ss_pred             HhcCcceecChhhc--cccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc
Confidence            99999999987632  2224444443345799999999998 6778888888887 999999987644332221223566


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +.++.|+.++.+..      +.++..+.+...+++++.  .+++.++|+++++||+.|.+++.. |.|+.+
T Consensus       312 GR~~~Gs~FGG~K~------~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  312 GRTWKGSAFGGFKS------KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             ccEEEEEecccccc------hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            88899988877532      467888888888888884  699999999999999999999887 777753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-44  Score=324.48  Aligned_cols=298  Identities=20%  Similarity=0.303  Sum_probs=246.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHH-hcCCC-CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQE-KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~   78 (344)
                      |||+++++++..+            +++++.|  ++++||+|||.++|||++|++.+. |.++. ...+|+++|||++|+
T Consensus         5 ~~~~~~~~~~~~~------------~~~~~~p--~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~   70 (343)
T PRK09880          5 TQSCVVAGKKDVA------------VTEQEIE--WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGK   70 (343)
T ss_pred             ceEEEEecCCceE------------EEecCCC--CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEE
Confidence            6889998888754            3778877  388999999999999999999875 33322 235789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe--------------------------------cCCCceeeEEeecc---cCCCCCCCHHH
Q 019196           79 VDAVGPNVSNFKVGDTVCGF--------------------------------AALGSFAQFIVADQ---FPVPKGCDLLA  123 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~  123 (344)
                      |+++  ++++|++||||+..                                ..+|+|+||+++++   +++|+++++++
T Consensus        71 V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~  148 (343)
T PRK09880         71 IVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKV  148 (343)
T ss_pred             EEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHH
Confidence            9999  67889999999742                                12599999999999   99999999987


Q ss_pred             HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCC
Q 019196          124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES  202 (344)
Q Consensus       124 aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~  202 (344)
                      ++ +..++++||+++. .....++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++++.+
T Consensus       149 aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~  225 (343)
T PRK09880        149 MA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD  225 (343)
T ss_pred             HH-hhcHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc
Confidence            66 5578899999984 456668999999997 9999999999999999 699999999999999999999999887655


Q ss_pred             chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC
Q 019196          203 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  281 (344)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (344)
                      +    .++...  ..++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.++...      
T Consensus       226 ~----~~~~~~--~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~------  292 (343)
T PRK09880        226 L----DHYKAE--KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP-PEFPMMTLIVKEISLKGSFRF------  292 (343)
T ss_pred             H----HHHhcc--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHHhCCcEEEEEeec------
Confidence            3    223222  2369999999997 4678899999999999999975433 335566778899999987632      


Q ss_pred             chhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          282 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       282 ~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                          .+.++++++++++|++++  .++++|+++|+++|++.+.+++..||+++.+
T Consensus       293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence                246889999999999985  6889999999999999999888789999864

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4e-44  Score=324.08  Aligned_cols=303  Identities=24%  Similarity=0.291  Sum_probs=248.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||++.+...+....         +...+++.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        11 ~~~~~~~~~~~~~~---------l~~~~~~~p~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~   79 (360)
T PLN02586         11 QKAFGWAARDPSGV---------LSPFHFSRRE-NGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVT   79 (360)
T ss_pred             hheeEEEecCCCCC---------ceEEeecCCC-CCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEE
Confidence            56666555444322         4556788898 69999999999999999999998876542 3568999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------cCCCceeeEEeecc---cCCCCCCCHH
Q 019196           81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQ---FPVPKGCDLL  122 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~  122 (344)
                      ++|+++++|++||+|+..                                   ..+|+|+||++++.   +++|++++++
T Consensus        80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~  159 (360)
T PLN02586         80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLD  159 (360)
T ss_pred             EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHH
Confidence            999999999999999631                                   12589999999998   9999999999


Q ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCCcEEEeCCCC
Q 019196          123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNE  201 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~  201 (344)
                      +++.+++.+.|+|+++.....++++++|||.|+ |++|++++|+|+.+|++|++++.+++++ ..++++|++.+++..+.
T Consensus       160 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~  238 (360)
T PLN02586        160 AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP  238 (360)
T ss_pred             HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH
Confidence            999999999999999866667789999999887 9999999999999999998887776654 45578999988876542


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                            ..+.+.+.  ++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.++..+.++..++    
T Consensus       239 ------~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~----  305 (360)
T PLN02586        239 ------EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-LELPIFPLVLGRKLVGGSDIGG----  305 (360)
T ss_pred             ------HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-CccCHHHHHhCCeEEEEcCcCC----
Confidence                  12333332  69999999997 4678899999999999999976433 2345556677788877776543    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                           .+.++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus       306 -----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        306 -----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             -----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence                 35688999999999999766 5899999999999999999889999998

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-43  Score=316.78  Aligned_cols=304  Identities=20%  Similarity=0.268  Sum_probs=249.0

Q ss_pred             Cceeeecc--cCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCc--ceeEEEEEeCCCCCCCCCCCEEE
Q 019196           21 SPIVLSKT--EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS--DYSGTVDAVGPNVSNFKVGDTVC   96 (344)
Q Consensus        21 ~~~~~~~~--~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~~~g~~~~~~~~Gd~V~   96 (344)
                      +.+.+.+.  .+.|..++++||+|||.++++||.|.....+.. .....|+++|+  +++|+|..+|+++++|++||+|+
T Consensus        25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~-~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~  103 (348)
T PLN03154         25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFH-DSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLIS  103 (348)
T ss_pred             ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccC-CCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEE
Confidence            44555542  466542489999999999999999876543322 22235889998  88999999999999999999999


Q ss_pred             EecCCCceeeEEeecc-------cCCCCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHH
Q 019196           97 GFAALGSFAQFIVADQ-------FPVPKGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK  168 (344)
Q Consensus        97 ~~~~~g~~~~~~~~~~-------~~~P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~  168 (344)
                      ++   |+|+||+.++.       +++|++++++ ++++++++++|||+++...++++++++|||+|++|++|++++|+|+
T Consensus       104 ~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk  180 (348)
T PLN03154        104 GI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK  180 (348)
T ss_pred             ec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence            86   68999988875       3459999986 6888999999999999888899999999999999999999999999


Q ss_pred             HcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCC-CchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEE
Q 019196          169 VCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV  246 (344)
Q Consensus       169 ~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~  246 (344)
                      .+|++|+++++++++.+.++ ++|++.++++++. ++   .+.+...+. .++|++|||+|+..+..++++++++|+++.
T Consensus       181 ~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~~-~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~  256 (348)
T PLN03154        181 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDL---DAALKRYFP-EGIDIYFDNVGGDMLDAALLNMKIHGRIAV  256 (348)
T ss_pred             HcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccH---HHHHHHHCC-CCcEEEEECCCHHHHHHHHHHhccCCEEEE
Confidence            99999999999999999987 7999999998753 44   333444443 589999999999888999999999999999


Q ss_pred             EeccCCCCC-----CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHH
Q 019196          247 IGFASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI  321 (344)
Q Consensus       247 ~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~  321 (344)
                      +|...+...     ..+...++.+++++.|+....+.    ....+.++++++++++|++++.+..+|+|+++++|++.+
T Consensus       257 ~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l  332 (348)
T PLN03154        257 CGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL----HLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGL  332 (348)
T ss_pred             ECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH----HHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHH
Confidence            997653321     12344567889999988754322    122467889999999999998888899999999999999


Q ss_pred             HcCCcceeEEEEecC
Q 019196          322 EDRKVIGKVMIAFDD  336 (344)
Q Consensus       322 ~~~~~~gkvvi~~~~  336 (344)
                      .+++..||+|+++++
T Consensus       333 ~~g~~~GKvVl~~~~  347 (348)
T PLN03154        333 FSGKNVGKQVIRVAK  347 (348)
T ss_pred             HcCCCCceEEEEecC
Confidence            999999999999865

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.3e-43  Score=322.35  Aligned_cols=307  Identities=23%  Similarity=0.363  Sum_probs=251.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++...+..           +.++++|.|. |+++||+|||.++++|++|++.+.|.++. ..+|+++|||++|+|+
T Consensus         3 ~~a~~~~~~~~~-----------~~~~~~~~P~-~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~   69 (368)
T cd08300           3 CKAAVAWEAGKP-----------LSIEEVEVAP-PKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVE   69 (368)
T ss_pred             ceEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEE
Confidence            899998876653           4457899999 69999999999999999999998887543 3578999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||+|++..                                                ..|+|+||+.++.
T Consensus        70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  149 (368)
T cd08300          70 SVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAE  149 (368)
T ss_pred             EeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEch
Confidence            9999999999999997641                                                1258999999988


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++++++++++.|||+++...++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       150 ~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~  228 (368)
T cd08300         150 ISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK  228 (368)
T ss_pred             hceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence               9999999999999999999999999877888999999999986 9999999999999999 7999999999999999


Q ss_pred             hcCCcEEEeCCCC--CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCC-Ccchhhhh
Q 019196          189 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIP-VIPANIAL  263 (344)
Q Consensus       189 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~  263 (344)
                      ++|++.++++.+.  ++   .+.+.+.+.+ ++|++|||+|. ..+..++++++++ |+++.+|....... ..+...+ 
T Consensus       229 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-  303 (368)
T cd08300         229 KFGATDCVNPKDHDKPI---QQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQL-  303 (368)
T ss_pred             HcCCCEEEcccccchHH---HHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHH-
Confidence            9999999987654  23   3445555554 89999999997 5788899999886 99999997642211 1122222 


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      .++..+.++..+.+..      .+.+.++++++.+|++++  .++++|+|+|+++||+.+.+++. .|++++
T Consensus       304 ~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         304 VTGRVWKGTAFGGWKS------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             hhcCeEEEEEecccCc------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            2334556655443211      356788999999999985  58899999999999999988765 488874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=7.7e-44  Score=291.87  Aligned_cols=321  Identities=28%  Similarity=0.376  Sum_probs=276.1

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      |++++.++|+|        ..++.+.++++|+. ..++|+|+..|+.|||+|+..+.|.|+.++.+|.+-|.|++|.|+.
T Consensus        21 kalvY~~hgdP--------~kVlql~~~~~p~~-~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~   91 (354)
T KOG0025|consen   21 KALVYSEHGDP--------AKVLQLKNLELPAV-PGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA   91 (354)
T ss_pred             ceeeecccCCc--------hhhheeecccCCCC-CCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence            78888888887        55677889999995 6666999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCC-CceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           82 VGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~-g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      +||++..|++||.|+....+ |+|++|.+..+   +++++.++++.||++..+.+|||..|....++++|++|+-.|+++
T Consensus        92 vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS  171 (354)
T KOG0025|consen   92 VGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANS  171 (354)
T ss_pred             ecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCccc
Confidence            99999999999999987653 99999999988   999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHH-HhcCCCccEEEeCCChhhHH
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLK-ARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~~~~d~vid~~g~~~~~  232 (344)
                      ++|++++|+||++|++-+-++|+....+.+    +++||++|+.-.+..-    .+..+ ......+.+.|||+|+....
T Consensus       172 ~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~----~~~~k~~~~~~~prLalNcVGGksa~  247 (354)
T KOG0025|consen  172 GVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD----RKMKKFKGDNPRPRLALNCVGGKSAT  247 (354)
T ss_pred             HHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc----hhhhhhhccCCCceEEEeccCchhHH
Confidence            999999999999999988888876655444    6799999985322211    11111 12345789999999999999


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC--chhHHHHHHHHHHHHHCCceeEeeeeeec
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYS  310 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~i~~~~~~~~~  310 (344)
                      ...+.|.++|+.+.+|..+.+....+...+++|++++.|+++..+....  |+...+.+.++.++++.|+++.+.....+
T Consensus       248 ~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~  327 (354)
T KOG0025|consen  248 EIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVP  327 (354)
T ss_pred             HHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeee
Confidence            9999999999999999888776678888899999999999999988765  88888999999999999999988888899


Q ss_pred             hhhHHHHHHHHHc-CCcceeEEEEec
Q 019196          311 PSEANLAFSAIED-RKVIGKVMIAFD  335 (344)
Q Consensus       311 l~~~~ea~~~~~~-~~~~gkvvi~~~  335 (344)
                      |++...|++...+ -...||-++.++
T Consensus       328 L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  328 LADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             chhhhHHHHHHHHHhccCCceEEEec
Confidence            9998888864443 334467777654

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.3e-43  Score=320.03  Aligned_cols=289  Identities=24%  Similarity=0.321  Sum_probs=242.6

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEE-e----
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-F----   98 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~-~----   98 (344)
                      +...+++.|+ |+++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|+++++|++||||.. .    
T Consensus        19 l~~~~~~~p~-~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~   96 (375)
T PLN02178         19 LSPFHFSRRE-NGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGS   96 (375)
T ss_pred             ceEEeecCCC-CCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCC
Confidence            4456788888 69999999999999999999999886532 346889999999999999999999999999963 1    


Q ss_pred             c------------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcC-C
Q 019196           99 A------------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQ-L  144 (344)
Q Consensus        99 ~------------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~-~  144 (344)
                      +                              .+|+|+||+.+++   +++|+++++++++++++.+.|+|+++..... .
T Consensus        97 cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~  176 (375)
T PLN02178         97 CQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTK  176 (375)
T ss_pred             CCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCC
Confidence            1                              1589999999998   9999999999999999999999999854433 3


Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +++++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++++|+++++++.+.      ..+...+  .++|++|
T Consensus       177 ~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~------~~v~~~~--~~~D~vi  247 (375)
T PLN02178        177 ESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS------QKMKEAV--GTMDFII  247 (375)
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH------HHHHHhh--CCCcEEE
Confidence            68999999987 999999999999999999998877654 677789999998876542      2233333  2699999


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                      ||+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.|+..+.         .+.+.++++++++|+++
T Consensus       248 d~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~i~  317 (375)
T PLN02178        248 DTVSAEHALLPLFSLLKVSGKLVALGLPEKP-LDLPIFPLVLGRKMVGGSQIGG---------MKETQEMLEFCAKHKIV  317 (375)
T ss_pred             ECCCcHHHHHHHHHhhcCCCEEEEEccCCCC-CccCHHHHHhCCeEEEEeCccC---------HHHHHHHHHHHHhCCCc
Confidence            999975 678899999999999999976433 2345566778999999877544         35688999999999999


Q ss_pred             EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          303 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       303 ~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +.+ +.|+|+|+++||+.+.+++..||+|+.+
T Consensus       318 ~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        318 SDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             ccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            776 6799999999999999999899999998

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.2e-43  Score=321.19  Aligned_cols=306  Identities=23%  Similarity=0.337  Sum_probs=254.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++++           +.+++++.|. |+++||+|||.++++|++|++.+.|.++ ...+|.++|||++|+|+
T Consensus         3 ~ka~~~~~~~~~-----------~~l~~~~~p~-~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~   69 (369)
T cd08301           3 CKAAVAWEAGKP-----------LVIEEVEVAP-PQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVE   69 (369)
T ss_pred             cEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEE
Confidence            899999887654           4557899999 6999999999999999999999888654 34678999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (344)
                      ++|+++++|++||||+.+.                                                 ..|+|+||+.++
T Consensus        70 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~  149 (369)
T cd08301          70 SVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVH  149 (369)
T ss_pred             EeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEe
Confidence            9999999999999998641                                                 127899999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      .   +++|+++++++++++++.+.|+|+++....+++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       150 ~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         150 VGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             cccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            8   9999999999999999999999999888889999999999987 9999999999999999 799999999999999


Q ss_pred             HhcCCcEEEeCCCC--CchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCC-CEEEEEeccCCC-CCCcchhhh
Q 019196          188 KSLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGE-IPVIPANIA  262 (344)
Q Consensus       188 ~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~  262 (344)
                      +++|++.+++..+.  .+   .+.+.+.+.+ ++|++|||+|.. .+..++.+++++ |+++.+|..... ...++... 
T Consensus       229 ~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~-  303 (369)
T cd08301         229 KKFGVTEFVNPKDHDKPV---QEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMN-  303 (369)
T ss_pred             HHcCCceEEcccccchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHH-
Confidence            99999988876542  22   2334444544 899999999874 678889999996 999999987542 11122222 


Q ss_pred             hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      +.+++++.|+..+.+.      ....++++++++.+|.++.  .++++|+|+|+++||+.+.+++.. |+++
T Consensus       304 ~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         304 LLNGRTLKGTLFGGYK------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             HhcCCeEEEEecCCCC------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            3468999988765431      1356888999999998874  578999999999999999988865 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-43  Score=317.25  Aligned_cols=309  Identities=23%  Similarity=0.322  Sum_probs=252.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.++++|.|++++++||+|||.++++|++|+..+....  ...+|.++|||++|+|+
T Consensus         1 Mka~~~~~~~~------------~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~--~~~~p~i~G~e~~G~V~   66 (347)
T PRK10309          1 MKSVVNDTDGI------------VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG--AHYYPITLGHEFSGYVE   66 (347)
T ss_pred             CceEEEeCCCc------------eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC--CCCCCcccccceEEEEE
Confidence            99999988765            34578888984368999999999999999997543211  12357899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|+++++|++||+|+++.                           ..|+|++|+.++.   +++|+++++++++.+. +
T Consensus        67 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~  145 (347)
T PRK10309         67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-P  145 (347)
T ss_pred             EeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-H
Confidence            9999999999999998642                           2589999999998   9999999999998763 5


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      ++++|+++ ....++++++|||+|+ |++|++++|+|+.+|++ |+++++++++++.++++|++.+++.++.+    ..+
T Consensus       146 ~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~----~~~  219 (347)
T PRK10309        146 ITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS----APQ  219 (347)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC----HHH
Confidence            67788886 6678899999999986 99999999999999996 78899999999999999999998876543    234


Q ss_pred             HHHHhcCCCcc-EEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCC--cchhhhhccceEEEEEEeccccccCchhH
Q 019196          210 FLKARKLKGVD-VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPV--IPANIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       210 ~~~~~~~~~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      +.+.+.+.++| ++|||+|. ..+..++++++++|+++.+|...+....  .....++.+++++.|++.+.... .+   
T Consensus       220 ~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-~~---  295 (347)
T PRK10309        220 IQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSP-WP---  295 (347)
T ss_pred             HHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCC-cc---
Confidence            55566667898 99999997 5778899999999999999976543221  12235678899999977542111 01   


Q ss_pred             HHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          286 EDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .+.++++++++++|.++  +.++++|+|+|+++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            35678899999999985  57899999999999999999998889999975

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8.2e-43  Score=315.50  Aligned_cols=304  Identities=24%  Similarity=0.315  Sum_probs=254.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |+|++++++++.           +.+++++.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        10 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv   76 (357)
T PLN02514         10 TTGWAARDPSGH-----------LSPYTYTLRK-TGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVV   76 (357)
T ss_pred             EEEEEEecCCCC-----------ceEEeecCCC-CCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEE
Confidence            578888888865           5667899999 69999999999999999999998876532 3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-e----------------------------------cCCCceeeEEeecc---cCCCCCCCHH
Q 019196           81 AVGPNVSNFKVGDTVCG-F----------------------------------AALGSFAQFIVADQ---FPVPKGCDLL  122 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~-~----------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~  122 (344)
                      ++|+++++|++||+|+. .                                  ..+|+|+||+.++.   +++|++++++
T Consensus        77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  156 (357)
T PLN02514         77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPE  156 (357)
T ss_pred             EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHH
Confidence            99999999999999963 1                                  12589999999998   9999999999


Q ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCC
Q 019196          123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNE  201 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~  201 (344)
                      +++.+++.+.|||+++......+++++++|+|+ |++|++++|+|+.+|+++++++++++++..+ +++|++.+++..+.
T Consensus       157 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~  235 (357)
T PLN02514        157 QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA  235 (357)
T ss_pred             HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence            999999999999999876666789999999976 9999999999999999999888888777655 57999877764432


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                            ..+.+.+  .++|++|||+|. ..+..++++++++|+++.+|...+.. .++...++.+++++.|+....    
T Consensus       236 ------~~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~----  302 (357)
T PLN02514        236 ------AEMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPL-QFVTPMLMLGRKVITGSFIGS----  302 (357)
T ss_pred             ------HHHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCC-cccHHHHhhCCcEEEEEecCC----
Confidence                  1223333  369999999996 57788999999999999999775432 345556778899999987654    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                           ...++++++++++|++++.+ ++|+|+|+.+||+.+.+++..||+|++++..
T Consensus       303 -----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~  353 (357)
T PLN02514        303 -----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAGS  353 (357)
T ss_pred             -----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence                 35688999999999998766 5899999999999999999889999998653

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=4.9e-43  Score=319.32  Aligned_cols=304  Identities=20%  Similarity=0.257  Sum_probs=237.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCC-------CCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-------STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS   73 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~   73 (344)
                      |||+++.++++.+            ++++|.|++ +       ++||+|||.++|||++|++.+.|.++  ..+|+++||
T Consensus         3 mka~v~~~~~~~~------------~~e~~~P~~-~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~--~~~p~i~Gh   67 (393)
T TIGR02819         3 NRGVVYLGPGKVE------------VQDIDYPKL-ELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT--APTGLVLGH   67 (393)
T ss_pred             ceEEEEecCCcee------------EEeccCCcc-cCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC--CCCCccccc
Confidence            9999998888654            478888884 3       68999999999999999999987643  356899999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEe-------------------------------------cCCCceeeEEeecc----
Q 019196           74 DYSGTVDAVGPNVSNFKVGDTVCGF-------------------------------------AALGSFAQFIVADQ----  112 (344)
Q Consensus        74 e~~G~V~~~g~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~----  112 (344)
                      |++|+|+++|+++++|++||||...                                     ..+|+|+||++++.    
T Consensus        68 E~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (393)
T TIGR02819        68 EITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN  147 (393)
T ss_pred             eeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc
Confidence            9999999999999999999999531                                     02489999999984    


Q ss_pred             -cCCCCCCCH----HHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeE-EEEecCHHHHHH
Q 019196          113 -FPVPKGCDL----LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI-IAVARGAEKIKF  186 (344)
Q Consensus       113 -~~~P~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v-~~~~~~~~~~~~  186 (344)
                       +++|++++.    .+++++.+++.++|+++ ...+++++++|||.|+ |++|++++|+|+.+|+++ ++++++++|++.
T Consensus       148 l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~  225 (393)
T TIGR02819       148 LLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQ  225 (393)
T ss_pred             eEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence             789998753    35667788999999998 4688999999999766 999999999999999974 455677889999


Q ss_pred             HHhcCCcEEEeCC-CCCchhhHHHHHHHhcCCCccEEEeCCChh---------------hHHHHHhcccCCCEEEEEecc
Q 019196          187 LKSLGVDHVVDLS-NESVIPSVKEFLKARKLKGVDVLYDPVGGK---------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       187 ~~~~g~~~v~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++++|++. ++.. +.++   .+.+.+.+.+.++|++|||+|.+               .+++++++++++|+++.+|..
T Consensus       226 a~~~Ga~~-v~~~~~~~~---~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       226 ARSFGCET-VDLSKDATL---PEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             HHHcCCeE-EecCCcccH---HHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence            99999974 4443 3344   34455566677899999999974               688999999999999999986


Q ss_pred             C-CCCCC-----------cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eee-eeechhhHH
Q 019196          251 S-GEIPV-----------IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HIS-HTYSPSEAN  315 (344)
Q Consensus       251 ~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~-~~~~l~~~~  315 (344)
                      . +....           +.....+.+++++.+...       +.  .+.+.++++++.+|++++  +++ ++|+|++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-------~~--~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~  372 (393)
T TIGR02819       302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-------PV--MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAP  372 (393)
T ss_pred             CCcccccccccccccccccchHHhhccCceEEeccC-------Ch--hhhHHHHHHHHHcCCCCHHHceecceecHHHHH
Confidence            3 22111           112233445555554211       10  233467999999999885  455 789999999


Q ss_pred             HHHHHHHcCCcceeEEEEec
Q 019196          316 LAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       316 ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +||+.+.+++. +|+++.++
T Consensus       373 ~a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       373 EGYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             HHHHHHhhCCc-eEEEEeCC
Confidence            99999988754 79999863

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.1e-42  Score=315.95  Aligned_cols=307  Identities=24%  Similarity=0.370  Sum_probs=252.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+.++.           +.++++|.|. |+++||+|||.++++|++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         3 ~ka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~   68 (365)
T cd08277           3 CKAAVAWEAGKP-----------LVIEEIEVAP-PKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVE   68 (365)
T ss_pred             cEEEEEccCCCC-----------cEEEEEECCC-CCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEE
Confidence            789988876653           4567899999 5999999999999999999999888654  4578999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCceeeEEeecc-
Q 019196           81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQ-  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~-  112 (344)
                      ++|++++++++||+|++..                                               ..|+|+||+.++. 
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~  148 (365)
T cd08277          69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN  148 (365)
T ss_pred             eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence            9999999999999997641                                               1378999999998 


Q ss_pred             --cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh
Q 019196          113 --FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS  189 (344)
Q Consensus       113 --~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~  189 (344)
                        +++|+++++++++++++++.|||+++...++++++++|||+|+ |++|++++++|+.+|+ +|+++++++++++.+++
T Consensus       149 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~  227 (365)
T cd08277         149 YVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE  227 (365)
T ss_pred             heEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence              9999999999999999999999999878889999999999986 9999999999999999 79999999999999999


Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCCCcchhhhhccce
Q 019196          190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVKNW  267 (344)
Q Consensus       190 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  267 (344)
                      +|++++++..+.+. ...+.+.+.+. .++|++|||+|. ..+..++++++++ |+++.+|...+.....+...++. ++
T Consensus       228 ~ga~~~i~~~~~~~-~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~  304 (365)
T cd08277         228 FGATDFINPKDSDK-PVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GR  304 (365)
T ss_pred             cCCCcEeccccccc-hHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CC
Confidence            99998888655321 01233444555 689999999996 5678899999885 99999997653322233333333 78


Q ss_pred             EEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          268 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++.|+..+.+.      ....+++++++++++.++  +.+++.|+++|+++|++.+.+++. .|+++
T Consensus       305 ~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i  364 (365)
T cd08277         305 TWKGSFFGGFK------SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI  364 (365)
T ss_pred             EEEeeecCCCC------hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence            88887765431      124678899999998766  568899999999999999988774 58876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=2.8e-42  Score=312.05  Aligned_cols=303  Identities=24%  Similarity=0.310  Sum_probs=256.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC-CC---------CCCCCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QE---------KPPLPFV   70 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~-~~---------~~~~p~~   70 (344)
                      |||+++.+++.            +.+++++.|. |+++||+||+.++++|++|++.+.+.. ..         +...|.+
T Consensus         1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i   67 (351)
T cd08233           1 MKAARYHGRKD------------IRVEEVPEPP-VKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVT   67 (351)
T ss_pred             CceEEEecCCc------------eEEEeccCCC-CCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCce
Confidence            99999988665            3457899998 599999999999999999998765421 10         1236889


Q ss_pred             cCcceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCCC
Q 019196           71 PGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKGC  119 (344)
Q Consensus        71 ~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~~  119 (344)
                      +|||++|+|+++|++++++++||+|++..                            .+|+|++|+.++.   +++|+++
T Consensus        68 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~  147 (351)
T cd08233          68 LGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNV  147 (351)
T ss_pred             ecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCC
Confidence            99999999999999999999999998621                            1589999999998   9999999


Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++++.+ .++.+||+++ ..++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus       148 ~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~  224 (351)
T cd08233         148 PLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP  224 (351)
T ss_pred             CHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence            99999866 7889999998 7888999999999986 9999999999999999 89999999999999999999999988


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  277 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (344)
                      .+.++   .+.+.+.+.+.++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.+..... 
T Consensus       225 ~~~~~---~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~-  299 (351)
T cd08233         225 TEVDV---VAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKP-ISFNPNDLVLKEKTLTGSICYT-  299 (351)
T ss_pred             CccCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCC-CccCHHHHHhhCcEEEEEeccC-
Confidence            87766   5556666777789999999985 6788899999999999999986633 3345556778899999876432 


Q ss_pred             cccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhH-HHHHHHHHcCCcc-eeEEE
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEA-NLAFSAIEDRKVI-GKVMI  332 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~-~ea~~~~~~~~~~-gkvvi  332 (344)
                              .+.++++++++++|+++  +.++++|+++|+ ++|++.+.+++.. ||+||
T Consensus       300 --------~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         300 --------REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             --------cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence                    36789999999999996  457899999996 7899999988874 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.2e-42  Score=311.05  Aligned_cols=296  Identities=23%  Similarity=0.327  Sum_probs=245.4

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF-----   98 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~-----   98 (344)
                      +.++++|.|. |+++||+|||.++++|++|++.+.+.+.....+|.++|||++|+|+++|+++..+ +||+|+..     
T Consensus        11 ~~~~~~p~P~-~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~c   88 (349)
T TIGR03201        11 MVKTRVEIPE-LGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPC   88 (349)
T ss_pred             ceEEeccCCC-CCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCC
Confidence            4457899999 6999999999999999999998754433233568899999999999999999877 99999751     


Q ss_pred             ----------------------cCCCceeeEEeecc---cCCCC------CCCHHHHhhccchHHHHHHHHHHhcCCCCC
Q 019196           99 ----------------------AALGSFAQFIVADQ---FPVPK------GCDLLAAAALPVAFGTSHVALVHRAQLSSG  147 (344)
Q Consensus        99 ----------------------~~~g~~~~~~~~~~---~~~P~------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~  147 (344)
                                            ..+|+|+||+.++.   +++|+      ++++++++++++++.++|+++. ..+++++
T Consensus        89 g~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g  167 (349)
T TIGR03201        89 GECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKG  167 (349)
T ss_pred             CCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCC
Confidence                                  13589999999998   88998      8999999999999999999985 5789999


Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc----EEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD----VLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d----~vi  223 (344)
                      ++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++++|++.+++..+.+..+..+.+.+.+.+.++|    ++|
T Consensus       168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~  246 (349)
T TIGR03201       168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIF  246 (349)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEE
Confidence            99999999 9999999999999999999999999999999999999988876543222244555566677886    899


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                      ||+|.+ ....++++++++|+++.+|...... .++...++.++.++.+.+...         .+.++++++++++|+++
T Consensus       247 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       247 ECSGSKPGQESALSLLSHGGTLVVVGYTMAKT-EYRLSNLMAFHARALGNWGCP---------PDRYPAALDLVLDGKIQ  316 (349)
T ss_pred             ECCCChHHHHHHHHHHhcCCeEEEECcCCCCc-ccCHHHHhhcccEEEEEecCC---------HHHHHHHHHHHHcCCCC
Confidence            999974 5677899999999999999875432 244455667778888866432         35788999999999997


Q ss_pred             Ee-eeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          303 IH-ISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       303 ~~-~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +. +...|+|+++++||+.+.+++..||++++
T Consensus       317 ~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       317 LGPFVERRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             cccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence            52 33579999999999999999988999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=7.4e-42  Score=307.69  Aligned_cols=299  Identities=23%  Similarity=0.295  Sum_probs=244.7

Q ss_pred             eeecccCC----CCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcce--eEEEEEeCCCCCCCCCCCEEEE
Q 019196           24 VLSKTEPI----PQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY--SGTVDAVGPNVSNFKVGDTVCG   97 (344)
Q Consensus        24 ~~~~~~~~----p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~~g~~~~~~~~Gd~V~~   97 (344)
                      +.+.+.+.    |+ |+++||+|||.+++||+.|+....|.+......|+++|+++  .|++..+|+.++.|++||+|++
T Consensus        21 ~~~~~~~~~~~~p~-p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~   99 (338)
T cd08295          21 LELRTTKLTLKVPP-GGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG   99 (338)
T ss_pred             eEEEEecCCcCCCC-CCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe
Confidence            55566766    88 79999999999999999999988875432234578899755  4566667888889999999998


Q ss_pred             ecCCCceeeEEeecc----cCCC-CCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC
Q 019196           98 FAALGSFAQFIVADQ----FPVP-KGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG  171 (344)
Q Consensus        98 ~~~~g~~~~~~~~~~----~~~P-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g  171 (344)
                      +   |+|+||++++.    +++| ++++++ +++++++++.|||+++...++++++++|||+|++|++|++++|+|+.+|
T Consensus       100 ~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G  176 (338)
T cd08295         100 F---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKG  176 (338)
T ss_pred             c---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcC
Confidence            7   68999999986    6784 678887 7888999999999999888899999999999999999999999999999


Q ss_pred             CeEEEEecCHHHHHHHHh-cCCcEEEeCCCC-CchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEec
Q 019196          172 ATIIAVARGAEKIKFLKS-LGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       172 ~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ++|+++++++++.+.+++ +|+++++++.+. ++   .+.+.+.+ +.++|++|||+|+..+..++++++++|+++.+|.
T Consensus       177 ~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~-~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~  252 (338)
T cd08295         177 CYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDL---DAALKRYF-PNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM  252 (338)
T ss_pred             CEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccH---HHHHHHhC-CCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence            999999999999999988 999999987643 44   33344444 3689999999999888999999999999999986


Q ss_pred             cCCCCC-----CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          250 ASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       250 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                      ..+...     ..+...++.+++++.++.....    ++...+.++++++++.+|++++.+...|+++++++|++.+.++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~  328 (338)
T cd08295         253 ISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY----LHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTG  328 (338)
T ss_pred             cccCCCCCCCCccCHHHHhhccceeeEEEehhh----HHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcC
Confidence            543211     1233455677788877654332    2223467889999999999998777789999999999999999


Q ss_pred             CcceeEEEEe
Q 019196          325 KVIGKVMIAF  334 (344)
Q Consensus       325 ~~~gkvvi~~  334 (344)
                      +..||+|+++
T Consensus       329 ~~~GkvVl~~  338 (338)
T cd08295         329 SNIGKQVVKV  338 (338)
T ss_pred             CCCceEEEEC
Confidence            9999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.6e-42  Score=312.48  Aligned_cols=299  Identities=21%  Similarity=0.241  Sum_probs=235.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCC--CCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK--PPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~   78 (344)
                      |||+++...+. +          +.++++|.|+ |+++||+|||.+++||++|++.+.|.++..  ...|.++|||++|+
T Consensus         1 mka~~~~~~~~-~----------l~~~~~p~p~-~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~   68 (355)
T cd08230           1 MKAIAVKPGKP-G----------VRVVDIPEPE-PTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGV   68 (355)
T ss_pred             CceeEecCCCC-C----------CeEEeCCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceE
Confidence            89999975332 1          4557899999 699999999999999999999998875432  23578999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec------------------------------CCCceeeEEeecc---cCCCCCCCHHHHh
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAA  125 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa  125 (344)
                      |+++|++ ++|++||||+...                              .+|+|+||++++.   +++|++++  +++
T Consensus        69 V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a  145 (355)
T cd08230          69 VEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVG  145 (355)
T ss_pred             EEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cce
Confidence            9999999 9999999997531                              2488999999998   99999999  444


Q ss_pred             hccchHHHHHHHHHHh------cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec---CHHHHHHHHhcCCcEEE
Q 019196          126 ALPVAFGTSHVALVHR------AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVV  196 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~------~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~v~  196 (344)
                      ++..++++++.++...      .+.+++++|||+|+ |++|++++|+||.+|++|+++++   +++|++.++++|++. +
T Consensus       146 ~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v  223 (355)
T cd08230         146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-V  223 (355)
T ss_pred             eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-e
Confidence            4556777766655322      22568999999997 99999999999999999999987   678999999999986 4


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcc----hhhhhccceEEE
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIP----ANIALVKNWTVH  270 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~----~~~~~~~~~~~~  270 (344)
                      ++.+.+.    .+ ..  ...++|++|||+|. ..+..++++++++|+++.+|...+. ...++    ...++.+++++.
T Consensus       224 ~~~~~~~----~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~  296 (355)
T cd08230         224 NSSKTPV----AE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALV  296 (355)
T ss_pred             cCCccch----hh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEE
Confidence            5554443    11 11  13579999999997 4678899999999999999987652 22233    245677999999


Q ss_pred             EEEeccccccCchhHHHHHHHHHHHHHCCc------eeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          271 GLYWGSYKIHRPHVLEDSLRELLLWAAKGL------ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      |+...+         .+.++++++++.++.      +++.++++|+++|+++||+.+.++.  +|+|+++
T Consensus       297 g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         297 GSVNAN---------KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             EecCCc---------hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            976433         245677888887766      5567899999999999999887654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=9.5e-42  Score=307.60  Aligned_cols=321  Identities=28%  Similarity=0.358  Sum_probs=268.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCC-CeEEEEEEEeecChhhHHHHHhcCCCCCC----CCcccCcce
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-TAVRVRVKATSLNYANYLQILGKYQEKPP----LPFVPGSDY   75 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~I~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~   75 (344)
                      |||+++++.|.++        ..+.+++.|.|. |.+ +||+||+.++++|++|+..+.|..+....    .|.++|||+
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~   71 (341)
T cd08290           1 AKALVYTEHGEPK--------EVLQLESYEIPP-PGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEG   71 (341)
T ss_pred             CceEEEccCCCch--------hheEEeecCCCC-CCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcce
Confidence            9999999988652        125567889898 577 99999999999999999988876543222    677999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           76 SGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        76 ~G~V~~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                      +|+|+++|+++..+++||+|++.. ..|+|++|+.++.   +++|+++++++++++++.++|||+++.....++++++||
T Consensus        72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          72 VGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             EEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence            999999999999999999999875 3589999999998   999999999999999999999999997778899999999


Q ss_pred             EecCCChHHHHHHHHHHHcCCeEEEEecCH----HHHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhcCCCccEEEe
Q 019196          152 VLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       152 I~g~~g~~G~~~~~~~~~~g~~v~~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      |+|++|++|++++++|+..|++++++++++    ++.+.++++|++++++....   +.   ...+.....+ ++|++||
T Consensus       152 I~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~i~~~~~~-~~d~vld  227 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLA---TELLKSAPGG-RPKLALN  227 (341)
T ss_pred             EccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccH---HHHHHHHcCC-CceEEEE
Confidence            999999999999999999999999988876    66888889999999887654   44   3444455555 8999999


Q ss_pred             CCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc-cCchhHHHHHHHHHHHHHCCceeE
Q 019196          225 PVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                      |+|+..+...+++++++|+++.+|.........+....+.+++++.+........ ..|......+..+++++.++.+.+
T Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  307 (341)
T cd08290         228 CVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKA  307 (341)
T ss_pred             CcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccC
Confidence            9999888889999999999999986543322233334578899999988655443 455555678999999999999987


Q ss_pred             eeeeee---chhhHHHHHHHHHcCCcceeEEEEe
Q 019196          304 HISHTY---SPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       304 ~~~~~~---~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .....+   ++++++++++.+.+++..||+|+++
T Consensus       308 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         308 PPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             CcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            666677   9999999999999998899999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6.3e-42  Score=306.80  Aligned_cols=307  Identities=29%  Similarity=0.391  Sum_probs=247.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCc-ccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF-VPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V   79 (344)
                      ||+++++..++..           .+++.+.|. +.++||+|||.++|||+||++.+++..+.. ..|. ++|||++|+|
T Consensus         1 m~a~~~~~~~~~~-----------~~~~~~~p~-~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V   67 (350)
T COG1063           1 MKAAVVYVGGGDV-----------RLEEPPPPI-PGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEV   67 (350)
T ss_pred             CceeEEEecCCcc-----------ccccCCCCC-CCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEE
Confidence            8899998877642           146777774 699999999999999999999999875432 3344 8999999999


Q ss_pred             EEeCCCCCCCCCCCEEEE------------------e--------------cCCCceeeEEeecc----cCCCCCCCHHH
Q 019196           80 DAVGPNVSNFKVGDTVCG------------------F--------------AALGSFAQFIVADQ----FPVPKGCDLLA  123 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~------------------~--------------~~~g~~~~~~~~~~----~~~P~~~~~~~  123 (344)
                      +++| .+..+++||||..                  .              ..+|+|+||+.+|.    .++|+++ ..+
T Consensus        68 ~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~  145 (350)
T COG1063          68 VEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEE  145 (350)
T ss_pred             EEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-Chh
Confidence            9999 7788999999931                  0              02489999999996    5558888 555


Q ss_pred             HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh-cCCcEEEeCCCC
Q 019196          124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNE  201 (344)
Q Consensus       124 aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~  201 (344)
                      ++++..+++++|++........++.+|+|.|+ |++|++++++++..|+ +|++++.+++|++++++ .|++.+++....
T Consensus       146 ~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~  224 (350)
T COG1063         146 AAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED  224 (350)
T ss_pred             hhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc
Confidence            55577999999887545555566669999999 9999999999999998 78889999999999998 566666554443


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                      +.   ...+...+.+.++|++|||+|. ..+..++.+++++|+++.+|........++...++.+++++.|+.....   
T Consensus       225 ~~---~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~---  298 (350)
T COG1063         225 DA---GAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSG---  298 (350)
T ss_pred             cH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCC---
Confidence            33   5666777888899999999997 4578999999999999999998765434666788999999999843121   


Q ss_pred             CchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCc-ceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~-~gkvvi~~  334 (344)
                           ...++.+++++++|++++  .+++++++++++++++.+.+.+. ..|+++++
T Consensus       299 -----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         299 -----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             -----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence                 357899999999999996  47899999999999999987554 45888753

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.3e-41  Score=311.27  Aligned_cols=307  Identities=18%  Similarity=0.209  Sum_probs=244.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHH-HhcCCC-----CCCCCcccCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI-LGKYQE-----KPPLPFVPGSD   74 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e   74 (344)
                      |||+++.+++.            +.++++|.|+ |+++||+|||.++|+|++|++.+ .|....     ...+|+++|||
T Consensus         3 ~~a~~~~~~~~------------l~~~e~p~P~-~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE   69 (410)
T cd08238           3 TKAWRMYGKGD------------LRLEKFELPE-IADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE   69 (410)
T ss_pred             cEEEEEEcCCc------------eEEEecCCCC-CCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence            78888877665            4457899999 69999999999999999999976 343211     12468899999


Q ss_pred             eeEEEEEeCCCCC-CCCCCCEEEEec----------------CCCceeeEEeecc-------cCCCCCCCHHHHhhccch
Q 019196           75 YSGTVDAVGPNVS-NFKVGDTVCGFA----------------ALGSFAQFIVADQ-------FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        75 ~~G~V~~~g~~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~-------~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|+|+++|++++ +|++||||+...                .+|+|+||+.++.       +++|+++++++++.+ .+
T Consensus        70 ~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~-ep  148 (410)
T cd08238          70 FAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLV-EP  148 (410)
T ss_pred             cEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhc-ch
Confidence            9999999999998 699999997641                2599999999986       689999999998854 22


Q ss_pred             HH---HHHHHH--------HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCHHHHHHHHhc------
Q 019196          131 FG---TSHVAL--------VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKSL------  190 (344)
Q Consensus       131 ~~---ta~~~l--------~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~~------  190 (344)
                      ++   +++.++        ...++++++++|+|+|++|++|++++|+|+.+|+   +|++++++++|++.++++      
T Consensus       149 l~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~  228 (410)
T cd08238         149 LSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAA  228 (410)
T ss_pred             HHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhcccccc
Confidence            22   233332        2456789999999999889999999999999864   799999999999999987      


Q ss_pred             --CCc-EEEeCCC-CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC-CC-CCCcchhhhh
Q 019196          191 --GVD-HVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS-GE-IPVIPANIAL  263 (344)
Q Consensus       191 --g~~-~v~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~  263 (344)
                        |++ .++++.+ .++   .+.+.+.+.+.++|++|||+|. ..+..++++++++|+++.++... .. ...++...++
T Consensus       229 ~~Ga~~~~i~~~~~~~~---~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~  305 (410)
T cd08238         229 SRGIELLYVNPATIDDL---HATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVH  305 (410)
T ss_pred             ccCceEEEECCCccccH---HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhh
Confidence              665 4566543 344   4455566777789999999975 67888999999999888765432 21 1235555678


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .+++++.|+....         .+.++++++++++|++++  .++++|+|+++++|++.+. ++..||+|+.+
T Consensus       306 ~~~~~i~g~~~~~---------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         306 YNNTHYVGTSGGN---------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             hcCcEEEEeCCCC---------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            8999999976433         367889999999999997  6899999999999999999 67789999987

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=299.78  Aligned_cols=325  Identities=29%  Similarity=0.404  Sum_probs=271.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++....         +.+++.+.|. +.++||+|||.++++|+.|+....|.++.....|.++|+|++|+|+
T Consensus         2 m~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   71 (334)
T PTZ00354          2 MRAVTLKGFGGVDV---------LKIGESPKPA-PKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVE   71 (334)
T ss_pred             cEEEEEEecCCCcc---------eEEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence            99999998887532         4445667777 5899999999999999999998887654434557789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|++++++++||+|+++..+|+|++|+.++.   +++|+++++.+++.++.++.+||+++...++++++++|+|+|++|
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g  151 (334)
T PTZ00354         72 DVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS  151 (334)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            99999999999999999866799999999998   999999999999999999999999998778999999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      ++|++++++|+.+|++++++++++++.+.++++|++.+++....+ +   ...+.+.+.+.++|++|||++++.+..+++
T Consensus       152 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  228 (334)
T PTZ00354        152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGF---APKVKKLTGEKGVNLVLDCVGGSYLSETAE  228 (334)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHH---HHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence            999999999999999988899999999999999998888765543 4   455666666778999999999888899999


Q ss_pred             cccCCCEEEEEeccCCCCCC-cchhhhhccceEEEEEEecccc-ccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhH
Q 019196          237 LLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYK-IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA  314 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~  314 (344)
                      +++++|+++.++...+.... ++...++.++.++.++...... ...+....+.++.+++++.++.+++.+.+.|+++++
T Consensus       229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  308 (334)
T PTZ00354        229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEV  308 (334)
T ss_pred             HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence            99999999999865433211 4444456677788877654422 223444456778899999999998778899999999


Q ss_pred             HHHHHHHHcCCcceeEEEEecCCC
Q 019196          315 NLAFSAIEDRKVIGKVMIAFDDMK  338 (344)
Q Consensus       315 ~ea~~~~~~~~~~gkvvi~~~~~~  338 (344)
                      +++++.+.+++..+|+|+++.+.-
T Consensus       309 ~~~~~~~~~~~~~~kvvv~~~~~~  332 (334)
T PTZ00354        309 AEAHTFLEQNKNIGKVVLTVNEPL  332 (334)
T ss_pred             HHHHHHHHhCCCCceEEEecCCCC
Confidence            999999998888899999886654

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=4.9e-41  Score=303.40  Aligned_cols=304  Identities=22%  Similarity=0.305  Sum_probs=238.4

Q ss_pred             CceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC--CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEe
Q 019196           21 SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF   98 (344)
Q Consensus        21 ~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~   98 (344)
                      ...+.+++.+.|++++++||+|||.++|||+.|........  .....+|+++|||++|+|+++|+++++|++||+|+++
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            44577789999983249999999999999999964332111  1112467889999999999999999999999999886


Q ss_pred             cCCCceeeEEeecc---cCCCCCCCHHH----HhhccchHHHHHHHHHHhcCCCCC--CEEEEecCCChHHHHHHHHHHH
Q 019196           99 AALGSFAQFIVADQ---FPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKV  169 (344)
Q Consensus        99 ~~~g~~~~~~~~~~---~~~P~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~--~~vlI~g~~g~~G~~~~~~~~~  169 (344)
                      .  ++|++|++++.   +++|+++++.+    +++++.+++|||+++.+.++++++  ++|||+|++|++|++++|+|+.
T Consensus       100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~  177 (345)
T cd08293         100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL  177 (345)
T ss_pred             C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence            4  68999999998   99999864322    455778999999999888888877  9999999999999999999999


Q ss_pred             cCC-eEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEE
Q 019196          170 CGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       170 ~g~-~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~  247 (344)
                      +|+ +|+++++++++.+.+++ +|++.++++++.++   .+.+.+.+. +++|++|||+|+..+..++++++++|+++.+
T Consensus       178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~---~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~  253 (345)
T cd08293         178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNV---AERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIILC  253 (345)
T ss_pred             cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCH---HHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEEE
Confidence            999 89999999999998876 99999999887666   444555554 6899999999988888999999999999999


Q ss_pred             eccCCC---CC---Ccch--hh-hhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHH
Q 019196          248 GFASGE---IP---VIPA--NI-ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  318 (344)
Q Consensus       248 g~~~~~---~~---~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~  318 (344)
                      |.....   ..   ....  .. ...+++++.++....    .+....+.++++++++++|++++.....++++++++|+
T Consensus       254 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~  329 (345)
T cd08293         254 GQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAF  329 (345)
T ss_pred             eeeecccCccCccccccchhHHHhhhcceEEEEEEeec----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHH
Confidence            854321   10   0100  11 123444444332211    22334567888999999999997666667999999999


Q ss_pred             HHHHcCCcceeEEEEe
Q 019196          319 SAIEDRKVIGKVMIAF  334 (344)
Q Consensus       319 ~~~~~~~~~gkvvi~~  334 (344)
                      +.+.+++..||+|+++
T Consensus       330 ~~~~~~~~~gkvvl~~  345 (345)
T cd08293         330 QSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHhcCCCCCeEEEEC
Confidence            9999999899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=7.8e-42  Score=302.96  Aligned_cols=288  Identities=18%  Similarity=0.199  Sum_probs=230.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecC-hhhHHHHHhcCCCC--CCCCcccCcceeE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN-YANYLQILGKYQEK--PPLPFVPGSDYSG   77 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G   77 (344)
                      |||+++.+++.            +.+++.+.|+ |+++||+|||.+++|| ++|++.+.|.++..  ..+|+++|||++|
T Consensus         2 ~ka~~~~~~~~------------l~~~e~~~p~-~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G   68 (308)
T TIGR01202         2 TQAIVLSGPNQ------------IELREVTLTP-PSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVG   68 (308)
T ss_pred             ceEEEEeCCCe------------EEEEEecCCC-CCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEE
Confidence            78999976654            4457899999 6999999999999996 69999888876432  3579999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCC
Q 019196           78 TVDAVGPNVSNFKVGDTVCGFA---------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS  145 (344)
Q Consensus        78 ~V~~~g~~~~~~~~Gd~V~~~~---------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  145 (344)
                      +|+++|+++ +|++||||+...         ..|+|+||+.+++   +++|++++++. +.+ .+++|||+++.+ . ..
T Consensus        69 ~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~  143 (308)
T TIGR01202        69 RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EV  143 (308)
T ss_pred             EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-cc
Confidence            999999998 599999998532         1499999999998   99999999865 444 467899999854 3 33


Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++++++|+|+ |++|++++|+|+.+|++ |++++.+++|++.++..   .++++.+.             .+.++|++||
T Consensus       144 ~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-------------~~~g~Dvvid  206 (308)
T TIGR01202       144 KVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-------------PRRDYRAIYD  206 (308)
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-------------cCCCCCEEEE
Confidence            5788999987 99999999999999997 55666677776666543   23332210             2457999999


Q ss_pred             CCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE
Q 019196          225 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       225 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                      |+|.+ .++.++++++++|+++.+|..... ..++...++.+++++.++....         .+.++++++++++|++++
T Consensus       207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l~~~g~i~~  276 (308)
T TIGR01202       207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRIAAEWQ---------PGDLHAVRELIESGALSL  276 (308)
T ss_pred             CCCCHHHHHHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEEecccc---------hhHHHHHHHHHHcCCCCh
Confidence            99985 578999999999999999986543 2345556778888888765332         367899999999999985


Q ss_pred             --eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          304 --HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       304 --~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                        .++++|+|+|+++|++.+.++...+|++++
T Consensus       277 ~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       277 DGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             hhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence              589999999999999988877677899874

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.4e-41  Score=301.13  Aligned_cols=295  Identities=21%  Similarity=0.279  Sum_probs=240.6

Q ss_pred             ceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCC
Q 019196           22 PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL  101 (344)
Q Consensus        22 ~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~  101 (344)
                      ..+.+++.+.|+ |+++||+|||.++++|+.+.   .|.+.. ...|.++|.|++|+|+++|+   .|++||+|+++   
T Consensus        17 ~~l~~~~~~~p~-~~~~evlv~v~a~~~n~~~~---~g~~~~-~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---   85 (325)
T TIGR02825        17 SDFELKTVELPP-LNNGEVLLEALFLSVDPYMR---VAAKRL-KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---   85 (325)
T ss_pred             CceEEEeccCCC-CCCCcEEEEEEEEecCHHHh---cccCcC-CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---
Confidence            346677899999 69999999999999999654   343322 23478999999999999774   59999999986   


Q ss_pred             CceeeEEeecc---c----CCCCCCCHHHH-hhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe
Q 019196          102 GSFAQFIVADQ---F----PVPKGCDLLAA-AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT  173 (344)
Q Consensus       102 g~~~~~~~~~~---~----~~P~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~  173 (344)
                      ++|++|+.++.   +    ++|++++++++ +++++++.|||+++.+.++++++++|||+|++|++|++++|+|+..|++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~  165 (325)
T TIGR02825        86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK  165 (325)
T ss_pred             cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence            46999998886   3    44999999997 6789999999999988899999999999999999999999999999999


Q ss_pred             EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCC
Q 019196          174 IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       174 v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      |+++++++++.+.++++|++.++++++.+.   ..+..+...++++|++|||+|++.+..++++++++|+++.+|...+.
T Consensus       166 Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~  242 (325)
T TIGR02825       166 VVGAAGSDEKVAYLKKLGFDVAFNYKTVKS---LEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY  242 (325)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEecccccc---HHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhc
Confidence            999999999999999999999999876433   33333334456899999999998889999999999999999865421


Q ss_pred             -----CCC-cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcc
Q 019196          254 -----IPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI  327 (344)
Q Consensus       254 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~  327 (344)
                           ... .....++.+++++.++....+   .++...+.++++++++++|++++.+...|+++++++|++.+.+++..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~  319 (325)
T TIGR02825       243 NRTGPLPPGPPPEIVIYQELRMEGFIVNRW---QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENL  319 (325)
T ss_pred             ccCCCCCCCcchHHHhhhcceEeEEEehhh---hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCC
Confidence                 111 122345667788877654322   22233567899999999999998777889999999999999999999


Q ss_pred             eeEEEE
Q 019196          328 GKVMIA  333 (344)
Q Consensus       328 gkvvi~  333 (344)
                      ||+|++
T Consensus       320 gkvVv~  325 (325)
T TIGR02825       320 GKTIVK  325 (325)
T ss_pred             CeEEeC
Confidence            999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=4e-41  Score=305.68  Aligned_cols=308  Identities=25%  Similarity=0.346  Sum_probs=254.0

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++.++++.           +.+++++.|. |+++||+|||.++++|++|+....|.++. ..+|.++|||++|+|++
T Consensus         2 ka~~~~~~~~~-----------l~~~~~~~p~-~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~   68 (361)
T cd08231           2 RAAVLTGPGKP-----------LEIREVPLPD-LEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVA   68 (361)
T ss_pred             eEEEEcCCCCC-----------CEEEeccCCC-CCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEE
Confidence            78999988842           5567899999 59999999999999999999998887642 45788999999999999


Q ss_pred             eCCCCCC------CCCCCEEEEec----------------------------------CCCceeeEEeecc----cCCCC
Q 019196           82 VGPNVSN------FKVGDTVCGFA----------------------------------ALGSFAQFIVADQ----FPVPK  117 (344)
Q Consensus        82 ~g~~~~~------~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~----~~~P~  117 (344)
                      +|+++++      |++||+|+.+.                                  ..|+|++|+.++.    +++|+
T Consensus        69 vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~  148 (361)
T cd08231          69 LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPD  148 (361)
T ss_pred             eCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCC
Confidence            9999976      99999998761                                  2589999999986    89999


Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEE
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV  196 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~  196 (344)
                      ++++++++.++++++|||+++......+++++|||+|+ |++|++++++|+.+|+ +|+++++++++.++++++|++.++
T Consensus       149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi  227 (361)
T cd08231         149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI  227 (361)
T ss_pred             CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence            99999999998999999999977666779999999986 9999999999999999 999999999999999999999888


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEe
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYW  274 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  274 (344)
                      +++.....+....+.+.+.+.++|++|||+|+ ..+..++++++++|+++.+|..... ....+...++.+++++.++..
T Consensus       228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (361)
T cd08231         228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN  307 (361)
T ss_pred             cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence            87665442222456667777899999999986 5678899999999999999976432 122333345788899888764


Q ss_pred             ccccccCchhHHHHHHHHHHHHHCC--c--eeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          275 GSYKIHRPHVLEDSLRELLLWAAKG--L--ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~l~~g--~--i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      .+         .+.++++++++.++  .  +.+.++++|+++++++||+.+.++.. +|+||+
T Consensus       308 ~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~  360 (361)
T cd08231         308 YD---------PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVID  360 (361)
T ss_pred             CC---------chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeC
Confidence            33         24566777777776  3  34567899999999999999988774 799885

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=8.5e-42  Score=306.96  Aligned_cols=291  Identities=16%  Similarity=0.180  Sum_probs=229.7

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCC---CCCCcccCcceeEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---PPLPFVPGSDYSGT   78 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~   78 (344)
                      |+++++++++.            .+++++.| . +++||+|||.++|||++|++.+.|.+...   ..+|+++|||++|+
T Consensus         4 ~~~~~~~~~~~------------~~~~~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~   69 (341)
T cd08237           4 QVYRLVRPKFF------------EVTYEEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGV   69 (341)
T ss_pred             cceEEeccceE------------EEeecCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEE
Confidence            56777776654            44788888 3 89999999999999999999998865321   35799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccchH
Q 019196           79 VDAVGPNVSNFKVGDTVCGF------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAF  131 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~  131 (344)
                      |+++|.+  +|++||||+..                        ..+|+|+||+++++   +++|+++++++|+ +..++
T Consensus        70 V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~  146 (341)
T cd08237          70 VVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELV  146 (341)
T ss_pred             EEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchH
Confidence            9998764  69999999753                        13589999999998   9999999999887 44799


Q ss_pred             HHHHHHHHHh--cCCCCCCEEEEecCCChHHHHHHHHHHH-cC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          132 GTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKV-CG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       132 ~ta~~~l~~~--~~~~~~~~vlI~g~~g~~G~~~~~~~~~-~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      +++|+++...  +.++++++|||+|+ |++|++++|+++. .| .+|++++++++|++.+++++++..++    +.    
T Consensus       147 ~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~----  217 (341)
T cd08237         147 SVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI----  217 (341)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh----
Confidence            9999998543  35688999999997 9999999999986 55 58999999999999998766543221    11    


Q ss_pred             HHHHHHhcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCch
Q 019196          208 KEFLKARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH  283 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (344)
                            ....++|++|||+|+    ..+..++++++++|+++.+|..... ..++...++.+++++.|+....       
T Consensus       218 ------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~~-------  283 (341)
T cd08237         218 ------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP-VPINTRMVLEKGLTLVGSSRST-------  283 (341)
T ss_pred             ------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC-cccCHHHHhhCceEEEEecccC-------
Confidence                  112369999999995    3578899999999999999976443 2345556788999999976432       


Q ss_pred             hHHHHHHHHHHHHHCC-----ceeEeeeeeechh---hHHHHHHHHHcCCcceeEEEEec
Q 019196          284 VLEDSLRELLLWAAKG-----LITIHISHTYSPS---EANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       284 ~~~~~~~~~~~~l~~g-----~i~~~~~~~~~l~---~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                        .+.+++++++++++     .+++.++++|+++   ++.++++.+.++ ..||+|++++
T Consensus       284 --~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         284 --REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             --HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence              35688899999998     4666788999985   566666655544 6789999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.7e-41  Score=300.87  Aligned_cols=301  Identities=25%  Similarity=0.357  Sum_probs=255.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++..           +.++++|.|+ +.++||+|++.++++|++|+..+.|.++. ...|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~   67 (333)
T cd08296           1 YKAVQVTEPGGP-----------LELVERDVPL-PGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRID   67 (333)
T ss_pred             CeEEEEccCCCC-----------ceEEeccCCC-CCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEE
Confidence            999999987432           4457899999 59999999999999999999998886542 3458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE----------------------------ecCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++++++++||+|++                            +..+|++++|+.++.   +++|+++++++++.++.
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~  147 (333)
T cd08296          68 AVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLC  147 (333)
T ss_pred             EECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhh
Confidence            99999999999999975                            223589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      .+.+||+++. ..+++++++|||+| +|++|++++++|+.+|++|+++++++++++.++++|+++++++...++   ...
T Consensus       148 ~~~ta~~~~~-~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~  222 (333)
T cd08296         148 AGVTTFNALR-NSGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDV---AEA  222 (333)
T ss_pred             hhHHHHHHHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccH---HHH
Confidence            9999999985 45899999999999 599999999999999999999999999999999999999988776655   333


Q ss_pred             HHHHhcCCCccEEEeCCC-hhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                      +.+.   .++|+++||+| ...+..++++++++|+++.+|...... .++...++.+++++.++....         .+.
T Consensus       223 ~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~---------~~~  289 (333)
T cd08296         223 LQEL---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPV-AVSPLQLIMGRKSIHGWPSGT---------ALD  289 (333)
T ss_pred             HHhc---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCC-CcCHHHHhhcccEEEEeCcCC---------HHH
Confidence            3333   36999999986 567888999999999999999766332 344456678999999977433         356


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++.++++++++++++.+ ..|+++++.+|++.+.+++..||+|++
T Consensus       290 ~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         290 SEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            77888889999988765 589999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.5e-40  Score=296.21  Aligned_cols=317  Identities=33%  Similarity=0.468  Sum_probs=267.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (344)
                      |||+++++++.+..         +.+.+.+.|. +.++||+|++.++++|++|+....|.++.  ....|.++|||++|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~   70 (324)
T cd08244           1 MRAIRLHEFGPPEV---------LVPEDVPDPV-PGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGV   70 (324)
T ss_pred             CeEEEEcCCCCccc---------eEEeccCCCC-CCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEE
Confidence            99999988776532         3345667777 58999999999999999999988775432  234577899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecC--CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196           79 VDAVGPNVSNFKVGDTVCGFAA--LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~~--~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                      |+++|++++.+++||+|+++..  .|+|++|+.++.   +++|++++++++++++..+.||| ++...++++++++|+|+
T Consensus        71 v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~  149 (324)
T cd08244          71 VDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVT  149 (324)
T ss_pred             EEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEE
Confidence            9999999999999999999762  589999999998   99999999999999999999995 55678899999999999


Q ss_pred             cCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHH
Q 019196          154 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  233 (344)
Q Consensus       154 g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (344)
                      |++|++|++++++|+.+|++|+++++++++.+.++++|++.+++..+.++   .+.+.+.+.++++|+++||+|+.....
T Consensus       150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~  226 (324)
T cd08244         150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDW---PDQVREALGGGGVTVVLDGVGGAIGRA  226 (324)
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHcCCCCceEEEECCChHhHHH
Confidence            99999999999999999999999999999999999999988888776665   555666667778999999999988888


Q ss_pred             HHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhh
Q 019196          234 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  313 (344)
Q Consensus       234 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~  313 (344)
                      ++++++++|+++.+|.........+...++.+++++.++.....   .+....+.+.++++++.++.+++.++..|++++
T Consensus       227 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  303 (324)
T cd08244         227 ALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQA---ERGGLRALEARALAEAAAGRLVPVVGQTFPLER  303 (324)
T ss_pred             HHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccC---CHHHHHHHHHHHHHHHHCCCccCccceEEeHHH
Confidence            99999999999999976543223333455788999888775432   224446788899999999999877888999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEe
Q 019196          314 ANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       314 ~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++++.+.++...||+++.+
T Consensus       304 ~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         304 AAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999999999999753

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=8.7e-41  Score=299.90  Aligned_cols=308  Identities=22%  Similarity=0.283  Sum_probs=248.8

Q ss_pred             CceEEecc-c-CCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEE
Q 019196            1 MEALVCRK-L-GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   78 (344)
                      ||||++.+ + |++.       ...+.+++.+.|+ |+++||+|||.+++||+.|......    ....|.++|+|++|+
T Consensus         3 ~~~~~~~~~~~~~~~-------~~~l~~~~~~~p~-~~~~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G~   70 (329)
T cd08294           3 AKTWVLKKHFDGKPK-------ESDFELVEEELPP-LKDGEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAKV   70 (329)
T ss_pred             ceEEEEecCCCCCCC-------ccceEEEecCCCC-CCCCcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEEE
Confidence            89999998 3 4441       1236778899999 6999999999999999987542111    124588999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc------cCCCCCCC-----HHHHhhccchHHHHHHHHHHhcCCCCC
Q 019196           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ------FPVPKGCD-----LLAAAALPVAFGTSHVALVHRAQLSSG  147 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~------~~~P~~~~-----~~~aa~l~~~~~ta~~~l~~~~~~~~~  147 (344)
                      |++   .+++|++||+|+++   ++|++|+.++.      +++|++++     ...+++++.+++|||+++...++++++
T Consensus        71 V~~---~~~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g  144 (329)
T cd08294          71 IES---KNSKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG  144 (329)
T ss_pred             Eec---CCCCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence            985   44679999999986   47899998864      78999998     233346789999999999888999999


Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ++|||+|++|++|++++|+|+.+|++|+++++++++.+.++++|+++++++++.++   .+.+...+. .++|++|||+|
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~---~~~v~~~~~-~gvd~vld~~g  220 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSL---EEALKEAAP-DGIDCYFDNVG  220 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccH---HHHHHHHCC-CCcEEEEECCC
Confidence            99999999999999999999999999999999999999999999999999887776   444444444 68999999999


Q ss_pred             hhhHHHHHhcccCCCEEEEEeccCCC-CC-----CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCce
Q 019196          228 GKLTKESLKLLNWGAQILVIGFASGE-IP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI  301 (344)
Q Consensus       228 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i  301 (344)
                      ++.+..++++++++|+++.+|..... ..     ......++.+++++.++....+    .....+.++++++++++|++
T Consensus       221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~g~i  296 (329)
T cd08294         221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW----QDRWPEALKQLLKWIKEGKL  296 (329)
T ss_pred             HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh----HHHHHHHHHHHHHHHHCCCC
Confidence            98889999999999999999854321 11     1122345677888887654332    12335678899999999999


Q ss_pred             eEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          302 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       302 ~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++.....|+++++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            976667899999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.5e-41  Score=297.15  Aligned_cols=309  Identities=34%  Similarity=0.453  Sum_probs=249.1

Q ss_pred             ceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCC---CCCcccCcceeEE---EEEeC-CCCCCCCCCCE
Q 019196           22 PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP---PLPFVPGSDYSGT---VDAVG-PNVSNFKVGDT   94 (344)
Q Consensus        22 ~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~~g-~~~~~~~~Gd~   94 (344)
                      ...+.++.+.|. |.++|++|++.++++||.|+.+..|.+....   .+|.+++.++.|.   +...| ..+.....||+
T Consensus        18 ~~~~~~~~~iP~-~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~   96 (347)
T KOG1198|consen   18 EVLFSEEVPIPE-PEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDA   96 (347)
T ss_pred             ceEEeecccCCC-CCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeE
Confidence            348888999999 6999999999999999999999999877555   6776666655555   44445 23456888888


Q ss_pred             EEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhc------CCCCCCEEEEecCCChHHHHHHH
Q 019196           95 VCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRA------QLSSGQVLLVLGAAGGVGVAAVQ  165 (344)
Q Consensus        95 V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~~~~vlI~g~~g~~G~~~~~  165 (344)
                      ++....+|+|+||++++.   +++|+++++++||++|..+.|||.++.+..      +++++++|||+||+|++|++++|
T Consensus        97 ~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQ  176 (347)
T KOG1198|consen   97 VVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQ  176 (347)
T ss_pred             EeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHH
Confidence            888888899999999988   999999999999999999999999999999      89999999999999999999999


Q ss_pred             HHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEE
Q 019196          166 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQIL  245 (344)
Q Consensus       166 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v  245 (344)
                      +|++.++..+++++++++.++++++|+++++||+++++   .+.+.+.+ +.+||+||||+|+........++...|+..
T Consensus       177 lAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~---~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~  252 (347)
T KOG1198|consen  177 LAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENV---VELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLKGGGGA  252 (347)
T ss_pred             HHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHH---HHHHHhhc-CCCccEEEECCCCCccccchhhhccCCceE
Confidence            99999976666667789999999999999999999777   66666666 889999999999988888888888888766


Q ss_pred             EEeccCCCCCCcchh----hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHH
Q 019196          246 VIGFASGEIPVIPAN----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI  321 (344)
Q Consensus       246 ~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~  321 (344)
                      .++...+........    .+........+....++.+.......+.++.+.+++++|++++.+.+.||++++.+|++.+
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~  332 (347)
T KOG1198|consen  253 YIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKL  332 (347)
T ss_pred             EEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHH
Confidence            665544321111111    0111111111222222222222333689999999999999999999999999999999999


Q ss_pred             HcCCcceeEEEEec
Q 019196          322 EDRKVIGKVMIAFD  335 (344)
Q Consensus       322 ~~~~~~gkvvi~~~  335 (344)
                      .++...||++++++
T Consensus       333 ~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  333 EKSHATGKVVLEKD  346 (347)
T ss_pred             hhcCCcceEEEEec
Confidence            99999999999876

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.3e-40  Score=298.48  Aligned_cols=305  Identities=29%  Similarity=0.462  Sum_probs=257.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (344)
                      |||++++++|.+           +.+.+.+.|. +.++||+|++.++++|++|+....|.++.  ...+|.++|+|++|+
T Consensus         1 ~ka~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~   68 (340)
T cd05284           1 MKAARLYEYGKP-----------LRLEDVPVPE-PGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGW   68 (340)
T ss_pred             CeeeEeccCCCC-----------ceEEeCCCCC-CCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEE
Confidence            899999987643           4456788888 59999999999999999999998886642  345688999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                      |+++|+++.++++||+|+++.                           ..|+|++|+.++.   +++|++++++++++++
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~  148 (340)
T cd05284          69 VEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLA  148 (340)
T ss_pred             EEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhc
Confidence            999999999999999998763                           2589999999998   9999999999999999


Q ss_pred             chHHHHHHHHHHh-cCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          129 VAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       129 ~~~~ta~~~l~~~-~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      ..+.|||+++... ..+.++++|||+|+ |++|++++++|+.+| .+|+++++++++.+.++++|++++++++.. +   
T Consensus       149 ~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~---  223 (340)
T cd05284         149 DAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-V---  223 (340)
T ss_pred             chHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-H---
Confidence            9999999999765 46888999999996 779999999999999 799999999999999999999999887765 5   


Q ss_pred             HHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhH
Q 019196          207 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      ..++.+.+.+.++|+++||+|+ .....++++++++|+++.+|....  ...+....+.+++++.+.....         
T Consensus       224 ~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---------  292 (340)
T cd05284         224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT---------  292 (340)
T ss_pred             HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc---------
Confidence            4556666666789999999996 677889999999999999986543  1223333457888888876432         


Q ss_pred             HHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          286 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .+.++.++++++++.+++ ..+.|++++++++++.+.+++..||+|+.+
T Consensus       293 ~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         293 RAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            357888999999999886 446899999999999999999899998753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.3e-40  Score=297.87  Aligned_cols=308  Identities=30%  Similarity=0.442  Sum_probs=256.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC------------------
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ------------------   62 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~------------------   62 (344)
                      |||+++...+.+.        .+.+.++.+.|. |.+++|+|||.++++|++|++...|.++                  
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   71 (350)
T cd08274           1 MRAVLLTGHGGLD--------KLVYRDDVPVPT-PAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWW   71 (350)
T ss_pred             CeEEEEeccCCcc--------ceeecccCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccc
Confidence            8999998776542        223334567777 5899999999999999999998877543                  


Q ss_pred             -CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEec-------------------CCCceeeEEeecc---cCCCCCC
Q 019196           63 -EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-------------------ALGSFAQFIVADQ---FPVPKGC  119 (344)
Q Consensus        63 -~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~---~~~P~~~  119 (344)
                       ....+|.++|||++|+|+++|+++++|++||+|++..                   .+|++++|+.++.   +++|+++
T Consensus        72 ~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          72 GGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCC
Confidence             1245688999999999999999999999999998731                   2489999999998   9999999


Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS  199 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~  199 (344)
                      ++.+++++++++.|||+++ ...+++++++|||+|++|++|++++++|+.+|+++++++++. +++.++++|++.+.+..
T Consensus       152 ~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~  229 (350)
T cd08274         152 SDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRD  229 (350)
T ss_pred             CHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCC
Confidence            9999999999999999988 778899999999999999999999999999999999888765 78888999987665544


Q ss_pred             CCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc
Q 019196          200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  279 (344)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (344)
                      ...    ..+ .+.+.+.++|++|||++++.+..++++++++|+++.+|.........+...++.+++++.++....   
T Consensus       230 ~~~----~~~-~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  301 (350)
T cd08274         230 APL----LAD-AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT---  301 (350)
T ss_pred             Ccc----HHH-HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC---
Confidence            332    223 455667789999999999888999999999999999986543322344445578888888877532   


Q ss_pred             cCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          280 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       280 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                            .+.+.++++++.++++++.+.+.|++++++++++.+.++...+|+|+.
T Consensus       302 ------~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         302 ------REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             ------HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence                  467889999999999988788999999999999999988888999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=9.1e-40  Score=293.01  Aligned_cols=318  Identities=26%  Similarity=0.329  Sum_probs=261.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||++++.++|.++.         +.+++++.|. |+++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus         2 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   70 (327)
T PRK10754          2 AKRIEFHKHGGPEV---------LQAVEFTPAD-PAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVS   70 (327)
T ss_pred             ceEEEEeccCChhH---------eEEeeccCCC-CCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEE
Confidence            89999998887654         6677889998 59999999999999999999988776642 3467889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      .+|++++++++||+|+... ..|+|++|+.++.   +++|+++++++++.++..+.+||+++...++++++++++|+|++
T Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  150 (327)
T PRK10754         71 KVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA  150 (327)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCC
Confidence            9999999999999998653 3589999999998   89999999999999999999999998888889999999999988


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      |.+|++++++++.+|++|+++++++++++.++++|++.+++.+..+.   .+.+...+.++++|++|||+++.....+++
T Consensus       151 g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~  227 (327)
T PRK10754        151 GGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENI---VERVKEITGGKKVRVVYDSVGKDTWEASLD  227 (327)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcH---HHHHHHHcCCCCeEEEEECCcHHHHHHHHH
Confidence            99999999999999999999999999999999999988888766555   555666777789999999999888888999


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhhccceEE-EEEEeccccccCchhHHHHHHHHHHHHHCCceeEe--eeeeechhh
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTV-HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSE  313 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~  313 (344)
                      +++++|+++.+|.........+...+..++..+ .......+ ..+++...+.+..+++++.+|.+++.  ..+.|++++
T Consensus       228 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~  306 (327)
T PRK10754        228 CLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKD  306 (327)
T ss_pred             HhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHH
Confidence            999999999999765322222222222222111 11111111 22344455677889999999999854  578999999


Q ss_pred             HHHHHHHHHcCCcceeEEEE
Q 019196          314 ANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       314 ~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++++++.+.+++..+|+|+.
T Consensus       307 ~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        307 AQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHHcCCCcceEEEe
Confidence            99999999999999999985

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1e-39  Score=293.79  Aligned_cols=312  Identities=27%  Similarity=0.335  Sum_probs=252.8

Q ss_pred             ceEEeccc---CCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEE
Q 019196            2 EALVCRKL---GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         2 ~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   78 (344)
                      ||+++.++   ++++.         +...++|.|+ |+++||+|||.++++|+.|+..+.+..+. ...|.++|+|++|+
T Consensus         1 ~~~~~~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~   69 (336)
T TIGR02817         1 KAVGYKKPLPITDPDA---------LVDIDLPKPK-PGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGV   69 (336)
T ss_pred             CceeeccccCCCCccc---------ceecccCCCC-CCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEE
Confidence            68899887   55543         6677899999 59999999999999999999988775432 34678899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC-----C
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----G  147 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~  147 (344)
                      |+++|+++++|++||+|+++.   ..|+|++|+.++.   +++|+++++++++.++..+.|||+++....++++     +
T Consensus        70 V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g  149 (336)
T TIGR02817        70 VVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDK  149 (336)
T ss_pred             EEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence            999999999999999999875   3589999999998   9999999999999999999999999988888887     9


Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++++|+++++++.. ++   .+.+.. ..++++|+++||+
T Consensus       150 ~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~---~~~i~~-~~~~~vd~vl~~~  224 (336)
T TIGR02817       150 RALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PL---KAQLEK-LGLEAVSYVFSLT  224 (336)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CH---HHHHHH-hcCCCCCEEEEcC
Confidence            99999999999999999999998 999999999999999999999999988654 33   333333 4456899999998


Q ss_pred             C-hhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec-cccccCchhH--HHHHHHHHHHHHCCcee
Q 019196          227 G-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG-SYKIHRPHVL--EDSLRELLLWAAKGLIT  302 (344)
Q Consensus       227 g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~g~i~  302 (344)
                      + +.....++++++++|+++.++...    ..+...+..+++++.+.... ......+...  ...++++++++.++.++
T Consensus       225 ~~~~~~~~~~~~l~~~G~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  300 (336)
T TIGR02817       225 HTDQHFKEIVELLAPQGRFALIDDPA----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR  300 (336)
T ss_pred             CcHHHHHHHHHHhccCCEEEEEcccc----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence            5 477888999999999999875321    12222334455766664433 1112222222  26788999999999998


Q ss_pred             Eeeeeee---chhhHHHHHHHHHcCCcceeEEEE
Q 019196          303 IHISHTY---SPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       303 ~~~~~~~---~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.+.+.+   +++++++|++.+.+++..||+++.
T Consensus       301 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       301 TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            7655555   479999999999999988998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1e-39  Score=299.53  Aligned_cols=314  Identities=26%  Similarity=0.358  Sum_probs=256.9

Q ss_pred             CceEEecc--cCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC---------CCCCCc
Q 019196            1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE---------KPPLPF   69 (344)
Q Consensus         1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~---------~~~~p~   69 (344)
                      |||++++.  +|.+        .+.+.++++|.|. ++++||+|++.++++|++|++...+....         ....+.
T Consensus        13 ~~a~~~~~~~~g~~--------~~~~~~~~~~~p~-l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~   83 (393)
T cd08246          13 MYAFAIRPERYGDP--------AQAIQLEDVPVPE-LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH   83 (393)
T ss_pred             hhheeeecccCCCc--------ccceEEeecCCCC-CCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence            88988863  3433        2236677889998 59999999999999999999887664110         011235


Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCC
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKG  118 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~  118 (344)
                      ++|||++|+|+++|++++.+++||+|+++.                            ..|+|++|+.++.   +++|++
T Consensus        84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~  163 (393)
T cd08246          84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH  163 (393)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence            789999999999999999999999998764                            2489999999998   999999


Q ss_pred             CCHHHHhhccchHHHHHHHHHHh--cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEE
Q 019196          119 CDLLAAAALPVAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV  196 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~  196 (344)
                      +++++++.++++++|||+++...  ++++++++|+|+|++|++|++++++|+.+|++++++++++++++.++++|++.++
T Consensus       164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i  243 (393)
T cd08246         164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI  243 (393)
T ss_pred             CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998654  6789999999999999999999999999999999999999999999999999988


Q ss_pred             eCCCCCc-------------------hhhHHHHHHHhcCC-CccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCC
Q 019196          197 DLSNESV-------------------IPSVKEFLKARKLK-GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV  256 (344)
Q Consensus       197 ~~~~~~~-------------------~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  256 (344)
                      +.+..+.                   ....+.+.+.+.+. ++|++|||+|...+..++++++++|+++.+|........
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  323 (393)
T cd08246         244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT  323 (393)
T ss_pred             cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence            8643210                   01134556667766 899999999988888999999999999999876543223


Q ss_pred             cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC-CcceeEEE
Q 019196          257 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVMI  332 (344)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~-~~~gkvvi  332 (344)
                      .+...++.++.++.+.....         .+.+.+++++++++.+.+.++++|++++++++++.+.++ +..||+++
T Consensus       324 ~~~~~l~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         324 YDNRYLWMRQKRIQGSHFAN---------DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             CcHHHHhhheeEEEecccCc---------HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence            44455667788877765433         356788999999999998788999999999999999988 78889886

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2e-39  Score=290.48  Aligned_cols=313  Identities=25%  Similarity=0.292  Sum_probs=254.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++.+++++.         +.++++|.|. ++++||+|++.++++|++|+..+.|.++....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (325)
T cd05280           1 FKALVVEEQDGGVS---------LFLRTLPLDD-LPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVV   70 (325)
T ss_pred             CceEEEcccCCCCc---------ceEEeCCCCC-CCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEE
Confidence            99999999987533         5567899999 5999999999999999999999888765434567889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCC--C-CCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL--S-SGQ  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~~~  148 (344)
                      ++  +++.+++||+|++..      .+|+|++|+.++.   +++|+++++++++.+++.+.+||+++....+.  . .++
T Consensus        71 ~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  148 (325)
T cd05280          71 SS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDG  148 (325)
T ss_pred             Ee--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCC
Confidence            98  456799999999863      3589999999998   99999999999999999999999998654433  5 357


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|+|+|++|++|++++++|+.+|++|+++++++++++.++++|++.+++..+.     ..+..+....+++|++|||+++
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~d~vi~~~~~  223 (325)
T cd05280         149 PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL-----LDESKKPLLKARWAGAIDTVGG  223 (325)
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH-----HHHHHHHhcCCCccEEEECCch
Confidence            99999999999999999999999999999999999999999999888875432     1223344445679999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      ..+..++++++++|+++.+|.........+...++.+++++.+......   .++...+.++.+.+++..+ +.+.+...
T Consensus       224 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~  299 (325)
T cd05280         224 DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC---PMELRKQVWQKLATEWKPD-LLEIVVRE  299 (325)
T ss_pred             HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC---chhHHHHHHHHHHHHHhcC-CccceeeE
Confidence            8899999999999999999976432222333344578888888775432   1223346667777777777 44457789


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEe
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      |++++++++++.+.+++..||+|+++
T Consensus       300 ~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         300 ISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             ecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            99999999999999999999999863

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-39  Score=293.54  Aligned_cols=309  Identities=30%  Similarity=0.460  Sum_probs=261.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++ ...         +.+++++.|. |.++||+|++.++++|++|+..+.|.++.....|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~-~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~   69 (341)
T cd08297           1 MKAAVVEEFG-EKP---------YEVKDVPVPE-PGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVV   69 (341)
T ss_pred             CceEEeeccC-CCC---------ceEEEeeCCC-CCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEE
Confidence            9999998877 211         4567889898 5999999999999999999998888765444567789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++++.+++||+|+.+.                            ..|++++|+.++.   +++|++++++++++++.
T Consensus        70 ~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~  149 (341)
T cd08297          70 AVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLC  149 (341)
T ss_pred             EeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHc
Confidence            9999999999999998641                            2589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      .+.|||+++.. .++++++++||+|+++++|++++++|+.+|++|+++++++++.+.++++|++.++++.+.++   ..+
T Consensus       150 ~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~  225 (341)
T cd08297         150 AGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDD---VEA  225 (341)
T ss_pred             chHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccH---HHH
Confidence            99999999855 58999999999999888999999999999999999999999999999999999988876655   556


Q ss_pred             HHHHhcCCCccEEEeCCC-hhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                      +.+.+.++++|+++||.+ ......++++++++|+++.+|.........+...++.++.++.+.....         .+.
T Consensus       226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  296 (341)
T cd08297         226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT---------RQD  296 (341)
T ss_pred             HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC---------HHH
Confidence            666677788999999766 4677889999999999999986653322333344557888888754332         477


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++.++++++++++++.+ ..|++++++++++.+.++...||++++|
T Consensus       297 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         297 LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            88999999999998644 6799999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.2e-39  Score=291.77  Aligned_cols=306  Identities=28%  Similarity=0.427  Sum_probs=263.0

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS  103 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~  103 (344)
                      +.+++.+.|. +.+++|+|++.++++|+.|+..+.+.+......|.++|||++|+|+++|++++++++||+|+++...|+
T Consensus        14 ~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~   92 (323)
T cd05282          14 LELVSLPIPP-PGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGT   92 (323)
T ss_pred             EEeEeCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCc
Confidence            5566778888 599999999999999999999887765443456789999999999999999999999999999874599


Q ss_pred             eeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          104 FAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       104 ~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      |++|+.++.   +++|+++++.+++.++..+.+||+++....++.++++|||+|++|.+|++++++|+.+|+++++++++
T Consensus        93 ~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~  172 (323)
T cd05282          93 WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR  172 (323)
T ss_pred             ceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999998   99999999999999999999999999888888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchh
Q 019196          181 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN  260 (344)
Q Consensus       181 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~  260 (344)
                      +++.+.++++|++.++++.+.+.   ...+.+.+.+.++|+++||+|+......+++++++|+++.+|.........+..
T Consensus       173 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~  249 (323)
T cd05282         173 DEQVEELKALGADEVIDSSPEDL---AQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRS  249 (323)
T ss_pred             hHHHHHHHhcCCCEEecccchhH---HHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHH
Confidence            99999999999999988776555   556667777789999999999887888899999999999998765432223333


Q ss_pred             hhhccceEEEEEEecccccc-CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          261 IALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      .+..+++++.+.....+... .|....+.++++++++.++.+.+.+.+.|++++++++++.+.+++..+|+|++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         250 VFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            33348999999887665433 56666788999999999999987788999999999999999998888898863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.5e-39  Score=294.32  Aligned_cols=307  Identities=26%  Similarity=0.341  Sum_probs=249.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.++            +++.+.|. +.++||+|||.++++|++|++...+.+.. ...|.++|||++|+|+
T Consensus         1 mka~~~~~~~~~~------------l~~~~~p~-~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~   66 (351)
T cd08285           1 MKAFAMLGIGKVG------------WIEKPIPV-CGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVE   66 (351)
T ss_pred             CceEEEccCCccE------------EEECCCCC-CCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEE
Confidence            9999999888643            46788888 59999999999999999999988776543 3558899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------CCCceeeEEeecc-----cCCCCCCCHHHHh
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQ-----FPVPKGCDLLAAA  125 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~-----~~~P~~~~~~~aa  125 (344)
                      ++|++++++++||+|++..                              .+|+|++|+.++.     +++|+++++++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa  146 (351)
T cd08285          67 EVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAV  146 (351)
T ss_pred             EecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhh
Confidence            9999999999999998742                              2589999999873     8999999999999


Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .++.++.|||+++ ..++++++++|||+|+ |++|++++|+|+.+|+ .++++++++++.+.++++|++.++++.+.++ 
T Consensus       147 ~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-  223 (351)
T cd08285         147 MLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDV-  223 (351)
T ss_pred             hhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCH-
Confidence            9999999999996 6788999999999975 9999999999999999 5888989899999999999999998877666 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCC-Ccchhh--hhccceEEEEEEecccccc
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPANI--ALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~  280 (344)
                        ..++...+.+.++|+++||+|+ ..+..++++++++|+++.+|....... ..+...  ...+..++.+.....    
T Consensus       224 --~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----  297 (351)
T cd08285         224 --VEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG----  297 (351)
T ss_pred             --HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC----
Confidence              4556666667789999999996 577889999999999999987654211 111101  112334444332111    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeE---eeeeeechhhHHHHHHHHHcCC-cceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITI---HISHTYSPSEANLAFSAIEDRK-VIGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~---~~~~~~~l~~~~ea~~~~~~~~-~~gkvvi~~  334 (344)
                      +    .+.++++++++++|++++   .+...|+++++++|++.+.+++ ...|+++++
T Consensus       298 ~----~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         298 G----RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             c----cccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            1    256888999999999997   3456699999999999999887 467999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=6.5e-39  Score=286.43  Aligned_cols=319  Identities=33%  Similarity=0.487  Sum_probs=268.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+.+.+..         +.+.+.+.|. +.++||+||+.++++|+.|+....+.++.....|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (323)
T cd05276           1 MKAIVIKEPGGPEV---------LELGEVPKPA-PGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVV   70 (323)
T ss_pred             CeEEEEecCCCccc---------ceEEecCCCC-CCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEE
Confidence            99999998776533         3345677777 4899999999999999999998877665444568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|++++++++||+|+++..+|+|++|+.++.   +++|+++++.++++++.++.++|+++.....+.++++++|+|++|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~  150 (323)
T cd05276          71 AVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS  150 (323)
T ss_pred             eeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcC
Confidence            99999999999999999877799999999988   999999999999999999999999988888899999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      ++|++++++++..|+++++++++.++.+.++++|.+.+++....+.   ...+.+...+.++|+++||+|+......+++
T Consensus       151 ~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~  227 (323)
T cd05276         151 GVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDF---AEEVKEATGGRGVDVILDMVGGDYLARNLRA  227 (323)
T ss_pred             hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhH---HHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence            9999999999999999999999999999998899888887766554   4455555666789999999998888889999


Q ss_pred             ccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc-cccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHH
Q 019196          238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  316 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~e  316 (344)
                      ++++|+++.+|.........+...++.+++++.++..... ....+....+.+.++++++.++++++..++.|+++++++
T Consensus       228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (323)
T cd05276         228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAE  307 (323)
T ss_pred             hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHH
Confidence            9999999999876433222333444578999998876553 233455556778889999999999877888999999999


Q ss_pred             HHHHHHcCCcceeEEE
Q 019196          317 AFSAIEDRKVIGKVMI  332 (344)
Q Consensus       317 a~~~~~~~~~~gkvvi  332 (344)
                      +++.+.++...||+++
T Consensus       308 a~~~~~~~~~~~kvv~  323 (323)
T cd05276         308 AHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHhCCCcceEeC
Confidence            9999998888888763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.7e-39  Score=284.62  Aligned_cols=300  Identities=31%  Similarity=0.374  Sum_probs=251.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++ ++.         +.+++.+.|. ++++||+|++.++++|+.|++...+.     ..|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~   64 (305)
T cd08270           1 MRALVVDPDA-PLR---------LRLGEVPDPQ-PAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVE   64 (305)
T ss_pred             CeEEEEccCC-Cce---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEE
Confidence            8999998866 432         5556788898 59999999999999999999876521     235689999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|+++..|++||+|+++...|+|++|+.++.   +++|+++++++++++++.+.+||+++...... ++++++|+|++|
T Consensus        65 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~  143 (305)
T cd08270          65 RAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG  143 (305)
T ss_pred             EeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence            99999999999999999876799999999998   99999999999999999999999998666555 599999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      ++|++++++++..|++|+++++++++.+.++++|++..+.... .          .. ..++|+++||+|+.....++++
T Consensus       144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~----------~~-~~~~d~vl~~~g~~~~~~~~~~  211 (305)
T cd08270         144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-E----------LS-GAPVDLVVDSVGGPQLARALEL  211 (305)
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-c----------cc-CCCceEEEECCCcHHHHHHHHH
Confidence            9999999999999999999999999999999999876553221 1          11 2479999999999888999999


Q ss_pred             ccCCCEEEEEeccCCCCCCcchhhhhc--cceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHH
Q 019196          238 LNWGAQILVIGFASGEIPVIPANIALV--KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  315 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~  315 (344)
                      ++++|+++.+|.........+...+..  ++.++.++....     +....+.++.++++++++++++.+.+.+++++++
T Consensus       212 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  286 (305)
T cd08270         212 LAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD-----GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEID  286 (305)
T ss_pred             hcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC-----HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHH
Confidence            999999999997653322234333333  588888877553     3334578899999999999998788899999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019196          316 LAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       316 ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++.+.++...||+|+.+
T Consensus       287 ~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         287 EAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.8e-39  Score=295.50  Aligned_cols=306  Identities=26%  Similarity=0.338  Sum_probs=253.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.            +.+++++.|++++++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~------------~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~   67 (386)
T cd08283           1 MKALVWHGKGD------------VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVE   67 (386)
T ss_pred             CeeEEEecCCC------------ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEE
Confidence            99999986654            3457888888425999999999999999999999887654 3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCceeeEEeecc-
Q 019196           81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQ-  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~-  112 (344)
                      ++|++++++++||+|++..                                               ..|+|++|+.++. 
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~  147 (386)
T cd08283          68 EVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFA  147 (386)
T ss_pred             EeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccc
Confidence            9999999999999997642                                               1489999999984 


Q ss_pred             ----cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          113 ----FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       113 ----~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                          +++|++++++++++++..+++||+++ ..++++++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+
T Consensus       148 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~  225 (386)
T cd08283         148 DVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMA  225 (386)
T ss_pred             cCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence                89999999999999999999999998 7889999999999976 9999999999999998 599999999999999


Q ss_pred             HhcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEeCCChh----------------------hHHHHHhcccCCCEE
Q 019196          188 KSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGK----------------------LTKESLKLLNWGAQI  244 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~  244 (344)
                      ++++...++++...+ +   ...+...+.+.++|++|||+|++                      .+..++++++++|++
T Consensus       226 ~~~~~~~vi~~~~~~~~---~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i  302 (386)
T cd08283         226 RSHLGAETINFEEVDDV---VEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTV  302 (386)
T ss_pred             HHcCCcEEEcCCcchHH---HHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEE
Confidence            998544677666543 4   45556666677899999999742                      567889999999999


Q ss_pred             EEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHH
Q 019196          245 LVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIE  322 (344)
Q Consensus       245 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~  322 (344)
                      +.+|.........+....+.+++++.+....         ..+.+++++++++++++.+  .+.+.|+++++++|++.+.
T Consensus       303 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~  373 (386)
T cd08283         303 SIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD  373 (386)
T ss_pred             EEEcCCCCCcCccCHHHHHhCCcEEEeccCC---------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence            9999765432334444567888888886421         1467888999999999986  3678999999999999998


Q ss_pred             cCC-cceeEEEE
Q 019196          323 DRK-VIGKVMIA  333 (344)
Q Consensus       323 ~~~-~~gkvvi~  333 (344)
                      ++. ..+|+|++
T Consensus       374 ~~~~~~~k~~~~  385 (386)
T cd08283         374 KKEDGCIKVVLK  385 (386)
T ss_pred             hCCCCeEEEEec
Confidence            876 46799985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=7e-39  Score=294.16  Aligned_cols=321  Identities=27%  Similarity=0.365  Sum_probs=262.5

Q ss_pred             CceEEecc--cCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC---------CCCCC-
Q 019196            1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE---------KPPLP-   68 (344)
Q Consensus         1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~---------~~~~p-   68 (344)
                      |||+++..  ++++        ...+.+.+++.|. |+++||+|++.++++|++|++...+....         ....| 
T Consensus         8 ~~a~~~~~~~~~~~--------~~~~~~~~~~~p~-l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T TIGR01751         8 MYAFAIREERDGDP--------RQAIQLEVVPVPE-LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPF   78 (398)
T ss_pred             hhheEEecccCCCc--------ccceEEeecCCCC-CCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCc
Confidence            89999965  6754        1235667899999 59999999999999999998766543210         00123 


Q ss_pred             cccCcceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCC
Q 019196           69 FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPK  117 (344)
Q Consensus        69 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~  117 (344)
                      .++|||++|+|+++|++++++++||+|++..                            ..|+|++|+.++.   +++|+
T Consensus        79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~  158 (398)
T TIGR01751        79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPK  158 (398)
T ss_pred             eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCC
Confidence            3799999999999999999999999998754                            2489999999998   99999


Q ss_pred             CCCHHHHhhccchHHHHHHHHHH--hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE
Q 019196          118 GCDLLAAAALPVAFGTSHVALVH--RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  195 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v  195 (344)
                      ++++++++.++..+.+||+++..  ..+++++++|+|+|++|++|++++++|+.+|++++++++++++.+.++++|++.+
T Consensus       159 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~  238 (398)
T TIGR01751       159 HLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAV  238 (398)
T ss_pred             CCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEE
Confidence            99999999999999999999854  4778999999999999999999999999999999999889999999999999999


Q ss_pred             EeCCCCCc-------------------hhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCC
Q 019196          196 VDLSNESV-------------------IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV  256 (344)
Q Consensus       196 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  256 (344)
                      ++.++.+.                   ....+.+.+.+.++++|++|||+|...+..++++++++|+++.+|........
T Consensus       239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  318 (398)
T TIGR01751       239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD  318 (398)
T ss_pred             ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence            98654311                   01234456667777899999999988888899999999999999977654333


Q ss_pred             cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          257 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      .+...++.++.++.++....         .+.+++++++++++++.+.++++|++++++++++.+.+++..||+|+.+..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       319 YDNRYLWMRQKRIQGSHFAN---------LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             cCHHHHhhcccEEEccccCc---------HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence            44455566777777655433         245778999999999998888999999999999999999999999999976


Q ss_pred             CCC
Q 019196          337 MKS  339 (344)
Q Consensus       337 ~~~  339 (344)
                      ..-
T Consensus       390 ~~~  392 (398)
T TIGR01751       390 PRP  392 (398)
T ss_pred             CCC
Confidence            543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-39  Score=293.74  Aligned_cols=307  Identities=32%  Similarity=0.496  Sum_probs=258.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++..           +.+++.|.|. +.++||+|++.++++|++|+....+.++.  .+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~   66 (367)
T cd08263           1 MKAAVLKGPNPP-----------LTIEEIPVPR-PKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVV   66 (367)
T ss_pred             CeeEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEE
Confidence            999999887643           4457788888 59999999999999999999988876643  567899999999999


Q ss_pred             EeCCCCCC---CCCCCEEEEe-------------------------------------------------cCCCceeeEE
Q 019196           81 AVGPNVSN---FKVGDTVCGF-------------------------------------------------AALGSFAQFI  108 (344)
Q Consensus        81 ~~g~~~~~---~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~  108 (344)
                      .+|+++++   +++||+|++.                                                 ...|++++|+
T Consensus        67 ~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  146 (367)
T cd08263          67 EVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYA  146 (367)
T ss_pred             EeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEE
Confidence            99999988   9999999872                                                 1248999999


Q ss_pred             eecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHH
Q 019196          109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI  184 (344)
Q Consensus       109 ~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~  184 (344)
                      .++.   +++|+++++.+++.++..++|||+++.....++++++|||+| +|++|++++++|+..|++ +++++.++++.
T Consensus       147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~  225 (367)
T cd08263         147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL  225 (367)
T ss_pred             EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            9998   999999999999999999999999998888889999999996 499999999999999997 99898899999


Q ss_pred             HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCC-CCCcchhhh
Q 019196          185 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIPANIA  262 (344)
Q Consensus       185 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~  262 (344)
                      +.++++|++.+++.+..++   ..++.+.+.+.++|++|||+++. ....++++++++|+++.++..... ........+
T Consensus       226 ~~~~~~g~~~v~~~~~~~~---~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  302 (367)
T cd08263         226 AKAKELGATHTVNAAKEDA---VAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRL  302 (367)
T ss_pred             HHHHHhCCceEecCCcccH---HHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHH
Confidence            9999999999998877666   55566666677899999999986 888899999999999999865432 122333334


Q ss_pred             hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.+++++.++...     .+   .+.++.++++++++.+++  .+++.|+++++.++++.+.+++..||+|++
T Consensus       303 ~~~~~~~~~~~~~-----~~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         303 VRRGIKIIGSYGA-----RP---RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             hhCCeEEEecCCC-----Cc---HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            4688887774321     11   367888999999999986  367899999999999999999989999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=4.8e-39  Score=290.90  Aligned_cols=306  Identities=28%  Similarity=0.422  Sum_probs=256.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-----------CCCCCc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-----------KPPLPF   69 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~   69 (344)
                      |||+++..++.+           +.++++|.|+ ++++||+|++.++++|++|+..+.|.++.           ....|.
T Consensus         1 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   68 (350)
T cd08240           1 MKAAAVVEPGKP-----------LEEVEIDTPK-PPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL   68 (350)
T ss_pred             CeeEEeccCCCC-----------ceEEecCCCC-CCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCc
Confidence            899999877754           4467889999 59999999999999999999998875431           224567


Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCC
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGC  119 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~  119 (344)
                      ++|+|++|+|+++|++++++++||+|+++.                           ..|++++|+.++.   +++|+++
T Consensus        69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~  148 (350)
T cd08240          69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGL  148 (350)
T ss_pred             ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCC
Confidence            899999999999999999999999998762                           3589999999998   8999999


Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++.+++.++..+.|||+++.....++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.
T Consensus       149 s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  227 (350)
T cd08240         149 DPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG  227 (350)
T ss_pred             CHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence            999999999999999999977777778999999975 9999999999999999 78999999999999999999888887


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  277 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (344)
                      ++.++   ...+.+...+ ++|++|||+|. .....++++++++|+++.+|....... .+......++.++.+..... 
T Consensus       228 ~~~~~---~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~~-  301 (350)
T cd08240         228 SDPDA---AKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEAT-LPLPLLPLRALTIQGSYVGS-  301 (350)
T ss_pred             CCccH---HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCc-ccHHHHhhcCcEEEEcccCC-
Confidence            66555   4445555555 89999999985 678889999999999999987654322 23333445778877766443 


Q ss_pred             cccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                              .+.+..++++++++.+++.....|++++++++++.+.+++..||+++.
T Consensus       302 --------~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         302 --------LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             --------HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence                    266888999999999987777899999999999999999888999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.2e-39  Score=290.17  Aligned_cols=306  Identities=29%  Similarity=0.455  Sum_probs=258.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+           +.+++.+.|. +.++||+|++.++++|++|+....|.++. ...|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   67 (345)
T cd08260           1 MRAAVYEEFGEP-----------LEIREVPDPE-PPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVV   67 (345)
T ss_pred             CeeEEEecCCCC-----------cEEEEccCCC-CCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEE
Confidence            999999887764           4557888898 59999999999999999999988886543 3557899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------ecCCCceeeEEeec----c-cCCCCCCCHHHHhhcc
Q 019196           81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVAD----Q-FPVPKGCDLLAAAALP  128 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~----~-~~~P~~~~~~~aa~l~  128 (344)
                      .+|++++++++||+|++                           +..+|+|++|+.++    . +++|+++++++++.++
T Consensus        68 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~  147 (345)
T cd08260          68 EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLG  147 (345)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhc
Confidence            99999999999999986                           43468999999987    3 8999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~  207 (344)
                      ..+.+||+++...+++.++++|+|+| +|++|++++++|+..|++|+++++++++.+.++++|++.+++.++ .++   .
T Consensus       148 ~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---~  223 (345)
T cd08260         148 CRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDV---A  223 (345)
T ss_pred             cchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhH---H
Confidence            99999999987788899999999999 599999999999999999999999999999999999999998876 454   4


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCC--CCcchhhhhccceEEEEEEeccccccCchh
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHV  284 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (344)
                      ..+.+...+ ++|++|||+|. ..+..++++++++|+++.+|......  ...+...++.+++++.+.....        
T Consensus       224 ~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  294 (345)
T cd08260         224 AAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP--------  294 (345)
T ss_pred             HHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC--------
Confidence            455555555 89999999985 67788999999999999999765332  2234444557888888765422        


Q ss_pred             HHHHHHHHHHHHHCCceeEe--eeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          285 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       285 ~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                       .+.++.++++++++++.+.  +.+.+++++++++++.+.+++..||+|++
T Consensus       295 -~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         295 -AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             -HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence             3678889999999998853  67899999999999999999999998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4.3e-39  Score=292.35  Aligned_cols=306  Identities=28%  Similarity=0.375  Sum_probs=254.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++..           +.+++.+.|. +.++||+|||.++++|++|++...|.++  ..+|.++|||++|+|+
T Consensus         3 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~   68 (365)
T cd08278           3 TTAAVVREPGGP-----------FVLEDVELDD-PRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVE   68 (365)
T ss_pred             cEEeeeccCCCc-----------ceEEEeecCC-CCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEE
Confidence            899999886643           4467888898 5999999999999999999999888654  3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-------------------------------------------------cCCCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGF-------------------------------------------------AALGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~  111 (344)
                      ++|+++.++++||+|++.                                                 ...|+|++|+.++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~  148 (365)
T cd08278          69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH  148 (365)
T ss_pred             EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence            999999999999999841                                                 1138899999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      .   +++|+++++++++.+++.+.|||.++...+.++++++|||+|+ |++|++++++|+..|+ .++++++++++.+.+
T Consensus       149 ~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         149 ERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             chhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            8   9999999999999999999999999888889999999999976 9999999999999999 588898999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC-CCCCcchhhhhcc
Q 019196          188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVK  265 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~  265 (344)
                      +++|++.++++++.++   .+.+...+ +.++|+++||+|. ..+..++++++++|+++.+|.... .....+...++.+
T Consensus       228 ~~~g~~~~i~~~~~~~---~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  303 (365)
T cd08278         228 KELGATHVINPKEEDL---VAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVS  303 (365)
T ss_pred             HHcCCcEEecCCCcCH---HHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhc
Confidence            9999999998877665   44555556 6789999999986 677889999999999999996532 2223444445578


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE-eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI-HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~-~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++++.++.....   .+   .+.+++++++++++++++ .+...|++++++++++.+.+++.. |+|+
T Consensus       304 ~~~~~~~~~~~~---~~---~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~  364 (365)
T cd08278         304 GKTIRGVIEGDS---VP---QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVL  364 (365)
T ss_pred             CceEEEeecCCc---Ch---HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEE
Confidence            888888764321   12   367788999999999864 345689999999999999887765 7776

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-38  Score=285.41  Aligned_cols=310  Identities=33%  Similarity=0.402  Sum_probs=265.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++..+.++.         +.+++.+.|. ++++|++|++.++++|++|++...|.++.....|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (336)
T cd08276           1 MKAWRLSGGGGLDN---------LKLVEEPVPE-PGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVV   70 (336)
T ss_pred             CeEEEEeccCCCcc---------eEEEeccCCC-CCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEE
Confidence            99999997765432         4445777787 5999999999999999999999888765544578899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC---------------------CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHH
Q 019196           81 AVGPNVSNFKVGDTVCGFAA---------------------LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHV  136 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~---------------------~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~  136 (344)
                      ++|++++++++||+|++...                     +|+|++|+.++.   +++|+++++.+++.++..+.+||+
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~  150 (336)
T cd08276          71 AVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWN  150 (336)
T ss_pred             EeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHH
Confidence            99999999999999998651                     588999999988   999999999999999999999999


Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhc
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARK  215 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~  215 (344)
                      ++...++++++++++|+| +|++|++++++++..|++|+++++++++.+.++++|.+.+++... .++   ...+.+.+.
T Consensus       151 ~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~  226 (336)
T cd08276         151 ALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDW---GEEVLKLTG  226 (336)
T ss_pred             HHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCH---HHHHHHHcC
Confidence            998888999999999996 499999999999999999999999999999998899988888765 445   455666677


Q ss_pred             CCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHH
Q 019196          216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLW  295 (344)
Q Consensus       216 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (344)
                      +.++|+++||++......++++++++|+++.+|.............++.+++++.+.....         .+.+++++++
T Consensus       227 ~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l  297 (336)
T cd08276         227 GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---------RAQFEAMNRA  297 (336)
T ss_pred             CCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---------HHHHHHHHHH
Confidence            7789999999998888899999999999999997654432344456678999999887543         3678888999


Q ss_pred             HHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          296 AAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       296 l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++++.+.+..++.|++++++++++.+.+++..+|++++
T Consensus       298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            99998887777899999999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.7e-38  Score=284.96  Aligned_cols=311  Identities=31%  Similarity=0.453  Sum_probs=258.2

Q ss_pred             CceEEecccCC--CCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGD--PTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   78 (344)
                      |||+++.++++  .+.         +.+++++.|. |.++||+|+|.++++|++|+....|.++....+|.++|+|++|+
T Consensus         2 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~   71 (329)
T cd08250           2 FRKLVVHRLSPNFREA---------TSIVDVPVPL-PGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGE   71 (329)
T ss_pred             ceEEEeccCCCCcccC---------ceEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEE
Confidence            99999999887  432         5567888898 59999999999999999999988887654456788999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                      |+.+|++++++++||+|+++.. |+|++|+.++.   +++|++  +.++++++..+.+||+++....+++++++++|+|+
T Consensus        72 v~~vG~~v~~~~~Gd~V~~~~~-g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga  148 (329)
T cd08250          72 VVAVGEGVTDFKVGDAVATMSF-GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAA  148 (329)
T ss_pred             EEEECCCCCCCCCCCEEEEecC-cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeC
Confidence            9999999999999999998764 89999999998   899997  35677889999999999987888999999999999


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHH
Q 019196          156 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  235 (344)
Q Consensus       156 ~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (344)
                      +|.+|++++++++..|++|+++++++++.+.++++|++.+++..+.+.   ...+.... ++++|++|||+|+.....++
T Consensus       149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~~-~~~vd~v~~~~g~~~~~~~~  224 (329)
T cd08250         149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDL---GEVLKKEY-PKGVDVVYESVGGEMFDTCV  224 (329)
T ss_pred             ccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccH---HHHHHHhc-CCCCeEEEECCcHHHHHHHH
Confidence            999999999999999999999999999999999999988887766554   33333333 46899999999988889999


Q ss_pred             hcccCCCEEEEEeccCCCC----------CCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEe-
Q 019196          236 KLLNWGAQILVIGFASGEI----------PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-  304 (344)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~-  304 (344)
                      ++++++|+++.+|......          ...+ ...+.+++++.++....+..    ...+.+.++++++.++.+++. 
T Consensus       225 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~  299 (329)
T cd08250         225 DNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK----LIPQHLDRLLQLYQRGKLVCEV  299 (329)
T ss_pred             HHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH----HHHHHHHHHHHHHHCCCeeeeE
Confidence            9999999999998654320          1111 23467888888877543321    135678889999999999874 


Q ss_pred             -eeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          305 -ISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       305 -~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                       ....|+++++.+|++.+.+++..+|+|++
T Consensus       300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence             45669999999999999998888898863

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.3e-38  Score=285.34  Aligned_cols=314  Identities=25%  Similarity=0.295  Sum_probs=246.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|++++         +.+++.+.|. |.++||+||+.++++|++|.....+.......+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~   70 (326)
T cd08289           1 FQALVVEKDEDDVS---------VSVKNLTLDD-LPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVV   70 (326)
T ss_pred             CeeEEEeccCCcce---------eEEEEccCCC-CCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEE
Confidence            99999998887643         6677899998 5999999999999999999876543222223458899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcC---CCCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQ---LSSGQ  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~~~  148 (344)
                      +.|  ++++++||+|++..      ..|+|++|+.++.   +++|+++++++++.+++.+.|||+++....+   ...++
T Consensus        71 ~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~  148 (326)
T cd08289          71 ESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQG  148 (326)
T ss_pred             EcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCC
Confidence            854  56799999999874      3599999999998   9999999999999999999999988854332   33478


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|++|++++++|+.+|++|+++++++++++.++++|++.+++.++. .   ...+... .+.++|++|||+|+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~~~-~~~~~d~vld~~g~  223 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-Q---EESIKPL-EKQRWAGAVDPVGG  223 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-H---HHHHHhh-ccCCcCEEEECCcH
Confidence            99999999999999999999999999999999999999999999888876543 1   2233333 35679999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      ..+..++++++++|+++.+|.........+...++.+++++.+........   ....+.+..+...+..+.+...+.++
T Consensus       224 ~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (326)
T cd08289         224 KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM---ELRRRIWRRLATDLKPTQLLNEIKQE  300 (326)
T ss_pred             HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc---hHHHHHHHHHHhhcCccccccccceE
Confidence            888999999999999999997643322233445568899998875322100   11123444444444333333456899


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEe
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      |+++++.+||+.+.+++..||+|+++
T Consensus       301 ~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         301 ITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             eeHHHHHHHHHHHhcCcccceEEEeC
Confidence            99999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=4.6e-38  Score=281.25  Aligned_cols=316  Identities=33%  Similarity=0.480  Sum_probs=266.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||+++++.++.++.         +.+++++.|. +.+++|+|++.++++|++|+..+.|.+......|+++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (325)
T cd08253           1 MRAIRYHEFGAPDV---------LRLGDLPVPT-PGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVE   70 (325)
T ss_pred             CceEEEcccCCccc---------ceeeecCCCC-CCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEE
Confidence            89999998776532         5557888898 4999999999999999999998877654444578899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      .+|++++++++||+|+++.     ..|++++|+.++.   +++|+++++.+++.+++++.+||+++....++.++++++|
T Consensus        71 ~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI  150 (325)
T cd08253          71 AVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV  150 (325)
T ss_pred             eeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE
Confidence            9999999999999999875     3589999999988   9999999999999999999999999988789999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (344)
                      +|+++++|++++++++..|++|+++++++++.+.++++|++.+++....+.   ...+...+.++++|+++||++.....
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDL---ADRILAATAGQGVDVIIEVLANVNLA  227 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCH---HHHHHHHcCCCceEEEEECCchHHHH
Confidence            999999999999999999999999999999999998999988888766655   45555556667899999999988888


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechh
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  312 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~  312 (344)
                      ..+++++++|+++.++..... ...+...++.++.++.+....   ...+....+.++.+.+++.++.+++..++.|+++
T Consensus       228 ~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  303 (325)
T cd08253         228 KDLDVLAPGGRIVVYGSGGLR-GTIPINPLMAKEASIRGVLLY---TATPEERAAAAEAIAAGLADGALRPVIAREYPLE  303 (325)
T ss_pred             HHHHhhCCCCEEEEEeecCCc-CCCChhHHHhcCceEEeeehh---hcCHHHHHHHHHHHHHHHHCCCccCccccEEcHH
Confidence            889999999999999875421 223333346677777766522   2344555678888889999999987788999999


Q ss_pred             hHHHHHHHHHcCCcceeEEEE
Q 019196          313 EANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       313 ~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +++++++.+.++...||++++
T Consensus       304 ~~~~~~~~~~~~~~~~kvv~~  324 (325)
T cd08253         304 EAAAAHEAVESGGAIGKVVLD  324 (325)
T ss_pred             HHHHHHHHHHcCCCcceEEEe
Confidence            999999999998889999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.1e-38  Score=288.36  Aligned_cols=305  Identities=25%  Similarity=0.307  Sum_probs=253.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCC-CCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||+++.+++.+            .+.++|.|. | .++||+||+.++++|++|++.+.|.++. .+.|.++|+|++|+|
T Consensus         1 ~ka~~~~~~~~~------------~~~~~~~p~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V   66 (347)
T cd05278           1 MKALVYLGPGKI------------GLEEVPDPK-IQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEV   66 (347)
T ss_pred             CceEEEecCCce------------EEEEcCCCC-CCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEE
Confidence            899999886653            346788888 6 8999999999999999999998887654 456889999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe------------------------------cCCCceeeEEeecc-----cCCCCCCCHHHH
Q 019196           80 DAVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQ-----FPVPKGCDLLAA  124 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~-----~~~P~~~~~~~a  124 (344)
                      +++|++++++++||+|++.                              ..+|+|++|++++.     +++|++++++++
T Consensus        67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~a  146 (347)
T cd05278          67 VEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDA  146 (347)
T ss_pred             EEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHH
Confidence            9999999999999999862                              22589999999983     899999999999


Q ss_pred             hhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       125 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      ++++..+.|||+++ ...+++++++|||.|+ |++|++++|+|+.+|+ +++++++++++.+.++++|++.++++.+.++
T Consensus       147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  224 (347)
T cd05278         147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDI  224 (347)
T ss_pred             hhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchH
Confidence            99999999999998 6788999999999765 9999999999999997 8888888888888889999999988876655


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  282 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (344)
                         ...+...+.+.++|++|||++. ..+..++++++++|+++.+|..............+.+++++.+.....      
T Consensus       225 ---~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  295 (347)
T cd05278         225 ---VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV------  295 (347)
T ss_pred             ---HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc------
Confidence               4555556666789999999987 678889999999999999986543321112223356777777654221      


Q ss_pred             hhHHHHHHHHHHHHHCCceeEe--eeeeechhhHHHHHHHHHcCCc-ceeEEEE
Q 019196          283 HVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKV-IGKVMIA  333 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~ea~~~~~~~~~-~gkvvi~  333 (344)
                         .+.++++++++.++.+++.  +...|++++++++++.+..++. .+|+|++
T Consensus       296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             ---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence               4678899999999999863  6688999999999999988776 6788875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.1e-38  Score=285.55  Aligned_cols=302  Identities=25%  Similarity=0.360  Sum_probs=245.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.            +.+++++.|. |+++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~------------~~~~~~~~p~-~~~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~   66 (339)
T PRK10083          1 MKSIVIEKPNS------------LAIEERPIPQ-PAAGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVID   66 (339)
T ss_pred             CeEEEEecCCe------------eEEEeccCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEE
Confidence            89999987664            4457889998 69999999999999999999998886543 2468899999999999


Q ss_pred             EeCCCCCCCCCCCEEE---------------------------EecCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVC---------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~---------------------------~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      .+|++++.+++||+|+                           ++..+|+|++|+.++.   +++|+++++++++ +..+
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~  145 (339)
T PRK10083         67 AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEP  145 (339)
T ss_pred             EECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhch
Confidence            9999999999999997                           4444689999999998   9999999998876 5578


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHH-cCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV-CGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~-~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      +.++|++ ....+++++++|+|+|+ |++|++++|+|+. +|++ ++++++++++.+.++++|++.++++++.++   .+
T Consensus       146 ~~~a~~~-~~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~---~~  220 (339)
T PRK10083        146 FTIAANV-TGRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPL---GE  220 (339)
T ss_pred             HHHHHHH-HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---HH
Confidence            8888864 47788999999999995 9999999999996 5995 777888889999999999999998776554   22


Q ss_pred             HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          209 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      .+..  .+.++|++|||+|. ..+..++++++++|+++.+|....... .....+..+++++.+....          .+
T Consensus       221 ~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~  287 (339)
T PRK10083        221 ALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSE-IVQQGITGKELSIFSSRLN----------AN  287 (339)
T ss_pred             HHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCce-ecHHHHhhcceEEEEEecC----------hh
Confidence            2211  23356799999995 578889999999999999997653221 2223334577777665421          35


Q ss_pred             HHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcC-CcceeEEEEec
Q 019196          288 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAFD  335 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~-~~~gkvvi~~~  335 (344)
                      .+++++++++++++++  .+++.|+++++++|++.+.++ ...+|+|+.+.
T Consensus       288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            6888999999999987  478999999999999998865 35689998764

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=7.7e-39  Score=288.13  Aligned_cols=309  Identities=26%  Similarity=0.354  Sum_probs=251.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..+| +..         +.+++++.|+ |+++||+|++.++++|++|+....+.+  ....|.++|||++|+|+
T Consensus         1 m~a~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~   67 (339)
T cd08249           1 QKAAVLTGPG-GGL---------LVVVDVPVPK-PGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVV   67 (339)
T ss_pred             CceEEeccCC-CCc---------ccccCCCCCC-CCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEE
Confidence            9999999886 433         5568899999 599999999999999999998775543  12346789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC--------CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCC-----
Q 019196           81 AVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL-----  144 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~--------~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----  144 (344)
                      .+|++++.+++||+|+++..        +|+|++|+.++.   +++|+++++++++.++..+.+||+++....++     
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~  147 (339)
T cd08249          68 EVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPP  147 (339)
T ss_pred             EeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCC
Confidence            99999999999999999853        489999999998   99999999999999999999999998766554     


Q ss_pred             -----CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          145 -----SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       145 -----~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                           ++++++||+|++|.+|++++++|+.+|++|++++ ++++.+.++++|++.+++..+.++   .+.+...+ ++++
T Consensus       148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~---~~~l~~~~-~~~~  222 (339)
T cd08249         148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDV---VEDIRAAT-GGKL  222 (339)
T ss_pred             CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchH---HHHHHHhc-CCCe
Confidence                 7899999999999999999999999999999888 568889999999999998877665   34444444 4679


Q ss_pred             cEEEeCCCh-hhHHHHHhcccC--CCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc---cCchhHHHHHHHHH
Q 019196          220 DVLYDPVGG-KLTKESLKLLNW--GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI---HRPHVLEDSLRELL  293 (344)
Q Consensus       220 d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  293 (344)
                      |++||++|. ..+..+++++++  +|+++.+|......       .+..+.++.......+..   ..+......++.+.
T Consensus       223 d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (339)
T cd08249         223 RYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP  295 (339)
T ss_pred             eEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHH
Confidence            999999997 788899999999  99999998654322       112233333333222221   23444456788899


Q ss_pred             HHHHCCceeEeeeeeec--hhhHHHHHHHHHcCC-cceeEEEEe
Q 019196          294 LWAAKGLITIHISHTYS--PSEANLAFSAIEDRK-VIGKVMIAF  334 (344)
Q Consensus       294 ~~l~~g~i~~~~~~~~~--l~~~~ea~~~~~~~~-~~gkvvi~~  334 (344)
                      ++++++++.+.....++  ++++++|++.+.+++ ..+|+|+++
T Consensus       296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            99999999976667788  999999999999988 889999863

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-38  Score=282.78  Aligned_cols=304  Identities=28%  Similarity=0.457  Sum_probs=254.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.+++++.|+ +.++||+|+|.++++|+.|+....+.++.. ..|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~~~-~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~   66 (337)
T cd08261           1 MKALVCEKPGR------------LEVVDIPEPV-PGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVV   66 (337)
T ss_pred             CeEEEEeCCCc------------eEEEECCCCC-CCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEE
Confidence            89999987653            5567899999 599999999999999999999988766542 447789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------ecCCCceeeEEeecc--cCCCCCCCHHHHhhccchH
Q 019196           81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVADQ--FPVPKGCDLLAAAALPVAF  131 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~~--~~~P~~~~~~~aa~l~~~~  131 (344)
                      .+|++++++++||+|++                           +...|+|++|+.+++  +++|+++++++++++ ..+
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~p~~~~~~~aa~~-~~~  145 (337)
T cd08261          67 EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPADALLVPEGLSLDQAALV-EPL  145 (337)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechheEECCCCCCHHHhhhh-chH
Confidence            99999999999999987                           323589999999998  999999999999877 678


Q ss_pred             HHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHH
Q 019196          132 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       132 ~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~  211 (344)
                      +++++++ ...+++++++|||+|+ |.+|++++++|+.+|++|+++++++++.+.++++|+++++++.+.++   ...+.
T Consensus       146 ~~a~~~~-~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~---~~~l~  220 (337)
T cd08261         146 AIGAHAV-RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDV---AARLR  220 (337)
T ss_pred             HHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCH---HHHHH
Confidence            8899887 7889999999999975 99999999999999999999999999999999999999998887665   45566


Q ss_pred             HHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          212 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      +.+.+.++|+++||+++ ..+..++++++++|+++.+|...... ..+...+..+++++.+...         ...+.++
T Consensus       221 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~  290 (337)
T cd08261         221 ELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV-TFPDPEFHKKELTILGSRN---------ATREDFP  290 (337)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCC-ccCHHHHHhCCCEEEEecc---------CChhhHH
Confidence            66677789999999976 57788999999999999998665322 2233344556777766421         1146788


Q ss_pred             HHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcC-CcceeEEEEe
Q 019196          291 ELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAF  334 (344)
Q Consensus       291 ~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~-~~~gkvvi~~  334 (344)
                      .+++++++|.+++  .+...|+++++.++++.+.++ ...+|+|+++
T Consensus       291 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         291 DVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            8999999999987  678899999999999999988 4788999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=7.5e-38  Score=280.13  Aligned_cols=310  Identities=25%  Similarity=0.288  Sum_probs=251.7

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++.+.+.+++         +.++++|.|. ++++||+||+.++++|++|++.+.|.++.....|.++|||++|+|+.
T Consensus         1 ~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~   70 (323)
T TIGR02823         1 KALVVEKEDGKVS---------AQVETLDLSD-LPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS   70 (323)
T ss_pred             CeEEEccCCCCcc---------eeEeecCCCC-CCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe
Confidence            6889988887654         7788999999 59999999999999999999998887643345688899999999988


Q ss_pred             eCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHh--cCCCCCC-E
Q 019196           82 VGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHR--AQLSSGQ-V  149 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~-~  149 (344)
                        +++..|++||+|+++.      .+|++++|+.++.   +++|+++++++++.++..+.+||.++...  ..+.+++ +
T Consensus        71 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~  148 (323)
T TIGR02823        71 --SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP  148 (323)
T ss_pred             --cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCce
Confidence              5567899999999874      3589999999998   99999999999999999999999887443  3378898 9


Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (344)
                      |+|+|++|.+|++++++|+.+|+++++++.++++++.++++|++.+++..+..     ..+..... .++|+++||+|++
T Consensus       149 vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~-~~~d~vld~~g~~  222 (323)
T TIGR02823       149 VLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLS-----PPGKPLEK-ERWAGAVDTVGGH  222 (323)
T ss_pred             EEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHH-----HHHHHhcC-CCceEEEECccHH
Confidence            99999999999999999999999999998888888999999998888754322     12222333 3599999999998


Q ss_pred             hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeee
Q 019196          230 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY  309 (344)
Q Consensus       230 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~  309 (344)
                      .+..++++++++|+++.+|.........+...++.+++++.+......   ......+.++.+.+++..+.+++. ...|
T Consensus       223 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  298 (323)
T TIGR02823       223 TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYC---PMALREAAWQRLATDLKPRNLESI-TREI  298 (323)
T ss_pred             HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecccc---CchhHHHHHHHHHHHhhcCCCcCc-eeee
Confidence            888999999999999999976432222233445588899888764321   112334567777788888888754 4689


Q ss_pred             chhhHHHHHHHHHcCCcceeEEEE
Q 019196          310 SPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       310 ~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +++++++|++.+.+++..||+|+.
T Consensus       299 ~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       299 TLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             cHHHHHHHHHHHhCCCccceEEEe
Confidence            999999999999999999999976

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.8e-38  Score=286.14  Aligned_cols=307  Identities=28%  Similarity=0.433  Sum_probs=255.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+           +.+++++.|+ ++++||+|++.++++|+.|+..+.|.++  ..+|+++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~   66 (363)
T cd08279           1 MRAAVLHEVGKP-----------LEIEEVELDD-PGPGEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAGVVE   66 (363)
T ss_pred             CeEEEEecCCCC-----------ceEEEeeCCC-CCCCeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceEEEE
Confidence            999999988654           4567889999 5999999999999999999998888664  3467789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------------------cCCCceeeEEeecc-
Q 019196           81 AVGPNVSNFKVGDTVCGF-----------------------------------------------AALGSFAQFIVADQ-  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~-  112 (344)
                      .+|++++++++||+|++.                                               ...|+|++|+.++. 
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  146 (363)
T cd08279          67 EVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEA  146 (363)
T ss_pred             EeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccc
Confidence            999999999999999983                                               23489999999998 


Q ss_pred             --cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHh
Q 019196          113 --FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS  189 (344)
Q Consensus       113 --~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~  189 (344)
                        +++|+++++++++.+++.+.+||+++....+++++++|||+|+ |++|++++++|+..|++ |+++++++++.+.+++
T Consensus       147 ~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~  225 (363)
T cd08279         147 SVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARR  225 (363)
T ss_pred             cEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence              9999999999999999999999999888889999999999965 99999999999999996 9999999999999999


Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC-CCCCcchhhhhccce
Q 019196          190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNW  267 (344)
Q Consensus       190 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~  267 (344)
                      +|++++++.+..++   ..++.+.+.+.++|+++||++. ..+..++++++++|+++.+|.... ....++...+..++.
T Consensus       226 ~g~~~vv~~~~~~~---~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  302 (363)
T cd08279         226 FGATHTVNASEDDA---VEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEK  302 (363)
T ss_pred             hCCeEEeCCCCccH---HHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCc
Confidence            99988888776665   4555556666789999999994 677889999999999999986542 222234344455677


Q ss_pred             EEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEE
Q 019196          268 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVM  331 (344)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvv  331 (344)
                      .+.++.....      ...+.+++++++++++.+++  .+.++|+++++.++++.+.+++..+.++
T Consensus       303 ~~~~~~~~~~------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         303 RLQGSLYGSA------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EEEEEEecCc------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            7777654321      11467889999999999985  4778999999999999999888765544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-38  Score=284.44  Aligned_cols=302  Identities=29%  Similarity=0.426  Sum_probs=252.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.           +.+++.|.|+ +.++||+|++.++++|++|+....|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   67 (334)
T PRK13771          1 MKAVILPGFKQG-----------YRIEEVPDPK-PGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVE   67 (334)
T ss_pred             CeeEEEcCCCCC-----------cEEEeCCCCC-CCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEE
Confidence            999999988863           4457889999 59999999999999999999988776542 3457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|++++.+++||+|+++.                           .+|+|++|+.++.   +++|+++++.+++.+++.
T Consensus        68 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~  147 (334)
T PRK13771         68 EVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCV  147 (334)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccch
Confidence            9999998899999999864                           1589999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +.+||+++... +++++++++|+|++|.+|++++++++..|++++++++++++.+.++++ ++.+++..  ++   .+++
T Consensus       148 ~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~v  220 (334)
T PRK13771        148 TGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KF---SEEV  220 (334)
T ss_pred             HHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hH---HHHH
Confidence            99999998655 899999999999999999999999999999999999999999988888 66666543  23   2333


Q ss_pred             HHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCC-CcchhhhhccceEEEEEEeccccccCchhHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  289 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (344)
                      .+.   .++|+++||+|+.....++++++++|+++.+|....... .......+.+++++.+.....         .+.+
T Consensus       221 ~~~---~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  288 (334)
T PRK13771        221 KKI---GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISAT---------KRDV  288 (334)
T ss_pred             Hhc---CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCC---------HHHH
Confidence            332   269999999998888899999999999999997643221 122333467788887764211         4678


Q ss_pred             HHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          290 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       290 ~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++++++++.+++.+.+.|+++++++|++.+.++...||+++..
T Consensus       289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        289 EEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            899999999999877889999999999999999888889999864

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.6e-38  Score=286.73  Aligned_cols=309  Identities=24%  Similarity=0.346  Sum_probs=245.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||.++...+..           +.++++|.|. +.++||+|||.++++|++|++.+.|.+.  ..+|+++|||++|+|+
T Consensus         8 ~~a~~~~~~~~~-----------~~l~~~p~p~-~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~   73 (373)
T cd08299           8 CKAAVLWEPKKP-----------FSIEEIEVAP-PKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVE   73 (373)
T ss_pred             eEEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEE
Confidence            678888765543           4457899999 5999999999999999999999988753  3568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++..+++||+|+.+.                                                ..|+|++|+.++.
T Consensus        74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~  153 (373)
T cd08299          74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE  153 (373)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence            9999999999999998651                                                2488999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++++++++++.+||+++...++++++++|||+|+ |++|++++++|+.+|+ +|+++++++++++.++
T Consensus       154 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~  232 (373)
T cd08299         154 IAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK  232 (373)
T ss_pred             cceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence               9999999999999999999999999878889999999999976 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcc-cCCCEEEEEeccCCCC-CCcchhhhhcc
Q 019196          189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLL-NWGAQILVIGFASGEI-PVIPANIALVK  265 (344)
Q Consensus       189 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~-~~~~~~~~~~~  265 (344)
                      ++|++.+++..+.+. +....+.+.+. +++|+++||+|. ..+..++..+ +++|+++.+|...... ..+... .+.+
T Consensus       233 ~lGa~~~i~~~~~~~-~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~  309 (373)
T cd08299         233 ELGATECINPQDYKK-PIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLT  309 (373)
T ss_pred             HcCCceEecccccch-hHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhc
Confidence            999998888654331 01344444554 579999999996 5566656554 6799999999765321 112211 2456


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +.++.++..+.+..      .+.+.++++.+.++.++  +.+++.|+++++.+|++.+.+++. .|+++.+
T Consensus       310 ~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         310 GRTWKGAVFGGWKS------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CCeEEEEEecCCcc------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            77888877654321      24455666666666544  457899999999999999887765 4777753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-38  Score=281.97  Aligned_cols=302  Identities=31%  Similarity=0.482  Sum_probs=251.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++..           +.++++|.|. +.++||+|++.++++|++|++...|.++. ...|.++|+|++|+|+
T Consensus         1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~   67 (332)
T cd08259           1 MKAAILHKPNKP-----------LQIEEVPDPE-PGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVE   67 (332)
T ss_pred             CeEEEEecCCCc-----------eEEEEccCCC-CCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEE
Confidence            899999763322           5567899999 59999999999999999999998886543 3457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|++++.+++||+|+++.                           ..|++++|+.++.   +++|+++++++++.+++.
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~  147 (332)
T cd08259          68 EVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACV  147 (332)
T ss_pred             EECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccH
Confidence            9999999999999999875                           1489999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +.+||+++.. +++++++++||+|++|++|++++++++..|++|+++++++++.+.+++++.+.+++..+  +   .+.+
T Consensus       148 ~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  221 (332)
T cd08259         148 VGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--F---SEDV  221 (332)
T ss_pred             HHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--H---HHHH
Confidence            9999999966 88999999999999999999999999999999999999999888888888877775543  3   2333


Q ss_pred             HHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      .+.   .++|++++|+|......++++++++|+++.++................++.++.+.....         .+.++
T Consensus       222 ~~~---~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  289 (332)
T cd08259         222 KKL---GGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISAT---------KADVE  289 (332)
T ss_pred             Hhc---cCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCC---------HHHHH
Confidence            322   279999999998888889999999999999987654322223233345677766653211         46788


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +++++++++.+++.+++.|++++++++|+.+.+++..||+|++
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            8999999999988888999999999999999998888998864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=5.5e-38  Score=282.74  Aligned_cols=303  Identities=22%  Similarity=0.342  Sum_probs=248.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.++           .++++|.|. |+++||+|||.++++|++|++.+.|.++.  ..|.++|||++|+|+
T Consensus         1 mka~~~~~~~~~~-----------~~~~~~~p~-~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~   66 (338)
T PRK09422          1 MKAAVVNKDHTGD-----------VVVEKTLRP-LKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVK   66 (338)
T ss_pred             CeEEEecCCCCCc-----------eEEEecCCC-CCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEE
Confidence            9999999887653           147889998 59999999999999999999988876532  236789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-----------e-----------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCG-----------F-----------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~-----------~-----------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|+++++|++||+|++           +                 ..+|++++|+.++.   +++|+++++.++++++.
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~  146 (338)
T PRK09422         67 EVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITC  146 (338)
T ss_pred             EECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhc
Confidence            99999999999999985           1                 12589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV  207 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~  207 (344)
                      .+.|||+++ ..++++++++|||+|+ |++|++++++|+. .|++|+++++++++.+.++++|++.+++.+. .++   .
T Consensus       147 ~~~ta~~~~-~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~  221 (338)
T PRK09422        147 AGVTTYKAI-KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDV---A  221 (338)
T ss_pred             chhHHHHHH-HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccH---H
Confidence            999999998 7788999999999995 9999999999998 4999999999999999999999998888754 333   3


Q ss_pred             HHHHHHhcCCCcc-EEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          208 KEFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       208 ~~~~~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                      +.+...+.  ++| +++++.+...+..++++++++|+++.+|...... ..+...+..++.++.++....         .
T Consensus       222 ~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~  289 (338)
T PRK09422        222 KIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESM-DLSIPRLVLDGIEVVGSLVGT---------R  289 (338)
T ss_pred             HHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCc-eecHHHHhhcCcEEEEecCCC---------H
Confidence            33444443  688 4555566678899999999999999998654322 233344556777776654322         3


Q ss_pred             HHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          287 DSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       287 ~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +.++.+++++++|.+.+.+. .+++++++++++.+.++...||+++.+.
T Consensus       290 ~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        290 QDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            56888999999999876554 6899999999999999999999998653

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-38  Score=284.79  Aligned_cols=302  Identities=20%  Similarity=0.309  Sum_probs=247.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--------CCCCCcccC
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--------KPPLPFVPG   72 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G   72 (344)
                      |||++++++++            +.+++.+.|+ +.++||+||+.++++|+.|+....|....        ....|.++|
T Consensus         1 mka~~~~~~~~------------~~~~~~~~p~-~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g   67 (350)
T cd08256           1 MRAVVCHGPQD------------YRLEEVPVPR-PGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPG   67 (350)
T ss_pred             CeeEEEecCCc------------eEEEECCCCC-CCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccC
Confidence            99999987765            3457889999 59999999999999999999988775311        013577899


Q ss_pred             cceeEEEEEeCCCCC--CCCCCCEEEE---------------------------ec--CCCceeeEEeecc----cCCCC
Q 019196           73 SDYSGTVDAVGPNVS--NFKVGDTVCG---------------------------FA--ALGSFAQFIVADQ----FPVPK  117 (344)
Q Consensus        73 ~e~~G~V~~~g~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~----~~~P~  117 (344)
                      ||++|+|+++|+.++  +|++||+|++                           +.  ..|+|++|+.++.    +++|+
T Consensus        68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~  147 (350)
T cd08256          68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPD  147 (350)
T ss_pred             cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCC
Confidence            999999999999998  8999999986                           31  3589999999986    69999


Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEE
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVV  196 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~  196 (344)
                      ++++++++.+ .+++++|+++ ..++++++++|+|.| +|++|++++++|+.+|++ ++++++++++.+.++++|++.++
T Consensus       148 ~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~  224 (350)
T cd08256         148 DIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL  224 (350)
T ss_pred             CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence            9999999988 8999999998 788999999999955 499999999999999985 67788888889988999999888


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhh-hccceEEEEEEe
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-LVKNWTVHGLYW  274 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  274 (344)
                      +....++   ..++.+.+.+.++|++|||+|. ..+..++++++++|+++.+|....... .+...+ ..+++++.++..
T Consensus       225 ~~~~~~~---~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~  300 (350)
T cd08256         225 NPPEVDV---VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVT-VDWSIIGDRKELDVLGSHL  300 (350)
T ss_pred             cCCCcCH---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCc-cChhHhhcccccEEEEecc
Confidence            8776666   5556666777789999999995 567889999999999999986543221 222222 355666666553


Q ss_pred             ccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          275 GSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ..          ..++++++++++|.+++  .+.+.|+++++++|++.+.+++..+|+|+
T Consensus       301 ~~----------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         301 GP----------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             Cc----------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            22          45788999999999986  37899999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-37  Score=277.52  Aligned_cols=315  Identities=32%  Similarity=0.442  Sum_probs=264.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++.++.         +.+++.+.|. +.+++|+|++.++++|++|+..+.+.+......|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (326)
T cd08272           1 MKALVLESFGGPEV---------FELREVPRPQ-PGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVE   70 (326)
T ss_pred             CeEEEEccCCCchh---------eEEeecCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEE
Confidence            99999998887643         4556777777 5899999999999999999998877654333457889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      .+|+++.++++||+|+++.     ..|++++|+.++.   +++|+++++.+++.++..+.+||+++....+++++++++|
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli  150 (326)
T cd08272          71 AVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI  150 (326)
T ss_pred             EeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence            9999999999999999875     2589999999988   9999999999999999999999999888899999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (344)
                      +|+++.+|++++++++..|++|++++++ ++.+.++++|++.+++.... +   ...+...+.+.++|+++||+++....
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~---~~~~~~~~~~~~~d~v~~~~~~~~~~  225 (326)
T cd08272         151 HGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-V---VEYVAEHTGGRGFDVVFDTVGGETLD  225 (326)
T ss_pred             EcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-H---HHHHHHhcCCCCCcEEEECCChHHHH
Confidence            9988999999999999999999999988 88888989999888876554 4   45555666677899999999988888


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc--ccccCchhHHHHHHHHHHHHHCCceeEeee-eee
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVLEDSLRELLLWAAKGLITIHIS-HTY  309 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~-~~~  309 (344)
                      .++++++++|+++.++... .   .+......+++++.+.....  .....+....+.+..+++++.++.+++.++ +.|
T Consensus       226 ~~~~~l~~~g~~v~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~  301 (326)
T cd08272         226 ASFEAVALYGRVVSILGGA-T---HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTF  301 (326)
T ss_pred             HHHHHhccCCEEEEEecCC-c---cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccccee
Confidence            8999999999999998653 1   11122336788888776543  333455556678899999999999987655 899


Q ss_pred             chhhHHHHHHHHHcCCcceeEEEEe
Q 019196          310 SPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       310 ~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++++++++.+.++...+|+++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         302 PLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             cHHHHHHHHHHHHcCCcccEEEEEC
Confidence            9999999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.4e-37  Score=277.86  Aligned_cols=306  Identities=28%  Similarity=0.402  Sum_probs=251.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||++++...+.++.         +.+.+.+.|. +.++||+|++.++++|++|+....+.++. ...|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~   69 (320)
T cd08243           1 MKAIVIEQPGGPEV---------LKLREIPIPE-PKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVE   69 (320)
T ss_pred             CeEEEEcCCCCccc---------eEEeecCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEE
Confidence            89999987775432         3445677777 59999999999999999999988776532 3457889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                      ++|+  .++++||+|+++.      .+|+|++|+.++.   +++|+++++++++.++.++.+||+++....+++++++||
T Consensus        70 ~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  147 (320)
T cd08243          70 EAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLL  147 (320)
T ss_pred             EecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEE
Confidence            9995  5799999999875      2489999999998   999999999999999999999999998888899999999


Q ss_pred             EecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH
Q 019196          152 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  231 (344)
Q Consensus       152 I~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (344)
                      |+|++|++|++++++|+.+|++|+++++++++.+.++++|++.+++. ..++   ...+.+.  ++++|+++||+++..+
T Consensus       148 V~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~---~~~i~~~--~~~~d~vl~~~~~~~~  221 (320)
T cd08243         148 IRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAI---AEQLRAA--PGGFDKVLELVGTATL  221 (320)
T ss_pred             EEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccH---HHHHHHh--CCCceEEEECCChHHH
Confidence            99999999999999999999999999999999999999999887753 3343   3444444  5789999999999888


Q ss_pred             HHHHhcccCCCEEEEEeccCCCCCC--cchhhh--hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeee
Q 019196          232 KESLKLLNWGAQILVIGFASGEIPV--IPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH  307 (344)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~  307 (344)
                      ..++++++++|+++.+|...+....  ......  +.+++++.++.....       ..+.++.++++++++.+++.+.+
T Consensus       222 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  294 (320)
T cd08243         222 KDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-------PQTPLQELFDFVAAGHLDIPPSK  294 (320)
T ss_pred             HHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh-------hHHHHHHHHHHHHCCceeccccc
Confidence            9999999999999999975432111  111111  356777766653321       13578889999999999877788


Q ss_pred             eechhhHHHHHHHHHcCCcceeEEE
Q 019196          308 TYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       308 ~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      .|+++++++|++.+.++...+|+|+
T Consensus       295 ~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         295 VFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             EEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            9999999999999998888888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=7.7e-38  Score=282.49  Aligned_cols=303  Identities=29%  Similarity=0.390  Sum_probs=250.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++.            +.+++++.|++++++||+|++.++++|+.|+....|.++  ...|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~   66 (344)
T cd08284           1 MKAVVFKGPGD------------VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVGEVV   66 (344)
T ss_pred             CeeEEEecCCC------------ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEEEEE
Confidence            89999976543            556889999843499999999999999999998887664  2447789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------CCCceeeEEeec----c-cCCCCCCCHHHH
Q 019196           81 AVGPNVSNFKVGDTVCGFA-------------------------------ALGSFAQFIVAD----Q-FPVPKGCDLLAA  124 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-------------------------------~~g~~~~~~~~~----~-~~~P~~~~~~~a  124 (344)
                      ++|++++++++||+|+++.                               .+|+|++|+.++    . +++|++++++++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a  146 (344)
T cd08284          67 EVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA  146 (344)
T ss_pred             eeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence            9999999999999998753                               148899999987    3 999999999999


Q ss_pred             hhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       125 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      ++++..++|||+++. .+++.++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|+. .++.+..++
T Consensus       147 ~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~  223 (344)
T cd08284         147 LLLGDILPTGYFGAK-RAQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEP  223 (344)
T ss_pred             hhhcCchHHHHhhhH-hcCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCH
Confidence            999999999999985 588899999999975 9999999999999997 899998888888888999975 456655555


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  282 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (344)
                         ...+.+.+.+.++|++|||+++ ..+..++++++++|+++.+|..............+.+++++.+....       
T Consensus       224 ---~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  293 (344)
T cd08284         224 ---VERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCP-------  293 (344)
T ss_pred             ---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCC-------
Confidence               4556666677789999999986 57788999999999999999765332223334557788887754211       


Q ss_pred             hhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          283 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                        ..+.++++++++.++.+++  .+.+.|++++++++++.+.+++. +|+|+.
T Consensus       294 --~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         294 --VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             --cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence              1467889999999999985  47788999999999999988877 899874

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.4e-37  Score=274.96  Aligned_cols=316  Identities=31%  Similarity=0.433  Sum_probs=263.7

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+.....+.+..         +.+.+.+.|. +.++||+|+|.++++|+.|++...+.++.  .+|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~   68 (320)
T cd05286           1 KAVRIHKTGGPEV---------LEYEDVPVPE-PGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEA   68 (320)
T ss_pred             CeEEEecCCCccc---------eEEeecCCCC-CCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEE
Confidence            5677666555432         3344566676 58999999999999999999988776542  4577899999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh
Q 019196           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  158 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  158 (344)
                      +|++++++++||+|+++...|++++|+.++.   +++|+++++.+++.++..+.++|+++....+++++++|||+|++|+
T Consensus        69 ~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~  148 (320)
T cd05286          69 VGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG  148 (320)
T ss_pred             ECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence            9999999999999999863489999999998   9999999999999999999999999988889999999999998899


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcc
Q 019196          159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  238 (344)
Q Consensus       159 ~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (344)
                      +|++++++++.+|++|+++++++++.+.++++|++.+++..+.++   ...+...+.+.++|+++||+++.....+++++
T Consensus       149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l  225 (320)
T cd05286         149 VGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDF---VERVREITGGRGVDVVYDGVGKDTFEGSLDSL  225 (320)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhH---HHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence            999999999999999999999999999999999988887766555   45556666677899999999988888899999


Q ss_pred             cCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHH
Q 019196          239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  318 (344)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~  318 (344)
                      +++|+++.+|.........+...+..+++++.+.....+. ..+....+.++++++++.++.+++...+.|+++++++++
T Consensus       226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~  304 (320)
T cd05286         226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI-ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAH  304 (320)
T ss_pred             ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc-CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHH
Confidence            9999999998765432223333334788888876654443 455566778889999999999987777899999999999


Q ss_pred             HHHHcCCcceeEEEE
Q 019196          319 SAIEDRKVIGKVMIA  333 (344)
Q Consensus       319 ~~~~~~~~~gkvvi~  333 (344)
                      +.+.++...+|+++.
T Consensus       305 ~~~~~~~~~~~vv~~  319 (320)
T cd05286         305 RDLESRKTTGKLLLI  319 (320)
T ss_pred             HHHHcCCCCceEEEe
Confidence            999998888899875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.6e-37  Score=279.74  Aligned_cols=307  Identities=30%  Similarity=0.441  Sum_probs=259.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||++++.+++++.          +..++.+.|. +++++|+|++.++++|+.|+....|.++.....|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~   69 (338)
T cd08254           1 MKAWRFHKGSKGL----------LVLEEVPVPE-PGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVV   69 (338)
T ss_pred             CeeEEEecCCCCc----------eEEeccCCCC-CCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEE
Confidence            9999999888751          3456788888 5999999999999999999999888775445567889999999999


Q ss_pred             EeCCCCCCCCCCCEEEE------------------ec---------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCG------------------FA---------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~------------------~~---------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      .+|++++++++||+|++                  ++         .+|+|++|+.++.   +++|++++++++++++.+
T Consensus        70 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~  149 (338)
T cd08254          70 EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDA  149 (338)
T ss_pred             EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcch
Confidence            99999999999999976                  21         2589999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +++||+++....+++++++|||.|+ |++|++++++|+..|++|+++++++++.+.++++|.+.+++..+...   ...+
T Consensus       150 ~~ta~~~l~~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~---~~~~  225 (338)
T cd08254         150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSP---KDKK  225 (338)
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCH---HHHH
Confidence            9999999988888999999999865 99999999999999999999999999999999999988887665544   2233


Q ss_pred             HHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  289 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (344)
                       ..+.+.++|+++||++. ..+..++++++++|+++.+|..... ...+...++.++.++.+++...         .+.+
T Consensus       226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~  294 (338)
T cd08254         226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK-LTVDLSDLIARELRIIGSFGGT---------PEDL  294 (338)
T ss_pred             -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC-CccCHHHHhhCccEEEEeccCC---------HHHH
Confidence             55566789999999985 5778899999999999999865432 2234455677888888755332         4678


Q ss_pred             HHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          290 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       290 ~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ..++++++++.+++. .+.|+++++.++++.+.+++..||+|+++
T Consensus       295 ~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         295 PEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            889999999999876 67899999999999999999999999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=2.8e-37  Score=276.30  Aligned_cols=321  Identities=31%  Similarity=0.482  Sum_probs=268.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++...+.+..         +.+++.+.|. +.+++|+|++.++++|+.|+....+.++.+..+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (325)
T TIGR02824         1 MKAIEITEPGGPEV---------LVLVEVPLPV-PKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVV   70 (325)
T ss_pred             CceEEEccCCCccc---------ceEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEE
Confidence            89999987776543         4345566666 4899999999999999999998877654434457889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      .+|+++.++++||+|+++..+|++++|+.++.   +++|+++++.++++++.++.++|+++.....+.++++++|+|++|
T Consensus        71 ~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~  150 (325)
T TIGR02824        71 AVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGAS  150 (325)
T ss_pred             EeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcc
Confidence            99999999999999999877799999999987   999999999999999999999999988889999999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      ++|++++++++..|++|+++++++++.+.++++|.+.+++....+.   ...+.....++++|++++|++...+..++++
T Consensus       151 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  227 (325)
T TIGR02824       151 GIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDF---VEVVKAETGGKGVDVILDIVGGSYLNRNIKA  227 (325)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhH---HHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence            9999999999999999999999999888888899887777655444   4455555666789999999998888889999


Q ss_pred             ccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc-ccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHH
Q 019196          238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS-YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  316 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~e  316 (344)
                      ++++|+++.+|.........+...++.+++++.+..... .....+......+.+++++++++.+++..++.|+++++++
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  307 (325)
T TIGR02824       228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQ  307 (325)
T ss_pred             hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHH
Confidence            999999999987543222334444558999999988655 2333444556778889999999999877888999999999


Q ss_pred             HHHHHHcCCcceeEEEEe
Q 019196          317 AFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       317 a~~~~~~~~~~gkvvi~~  334 (344)
                      +++.+.++...+|+++++
T Consensus       308 ~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       308 AHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHhCCCcceEEEeC
Confidence            999999888888998753

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.4e-37  Score=280.86  Aligned_cols=306  Identities=25%  Similarity=0.337  Sum_probs=253.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+            .+++++.|+++.++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus         1 m~a~~~~~~~~~------------~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   67 (345)
T cd08286           1 MKALVYHGPGKI------------SWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHEGVGVVE   67 (345)
T ss_pred             CceEEEecCCce------------eEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC-CCCCceecccceEEEE
Confidence            999999887753            347888888337999999999999999999998887643 3457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc-----cCCCCCCCHHHHhhc
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ-----FPVPKGCDLLAAAAL  127 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~-----~~~P~~~~~~~aa~l  127 (344)
                      ++|++++++++||+|+.+.                            .+|+|++|+.++.     +++|++++..+++.+
T Consensus        68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l  147 (345)
T cd08286          68 EVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVML  147 (345)
T ss_pred             EeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhc
Confidence            9999999999999998642                            1388999999874     899999999999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +..+++||+++....++++++++||.|+ |++|++++|+|+.+| .+|+++++++++...++++|++.++++...++   
T Consensus       148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---  223 (345)
T cd08286         148 SDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDA---  223 (345)
T ss_pred             cchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccH---
Confidence            9999999998777888999999999876 999999999999999 68999888888888999999999998776655   


Q ss_pred             HHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhH
Q 019196          207 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      ..++.+.+.+.++|++|||++. ..+..+++.++++|+++.+|..... ...+...++.+++++.+....          
T Consensus       224 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------  292 (345)
T cd08286         224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGLVD----------  292 (345)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeecCc----------
Confidence            4556666777789999999985 5678888999999999999865433 223444457788888875321          


Q ss_pred             HHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCC--cceeEEEEe
Q 019196          286 EDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRK--VIGKVMIAF  334 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~--~~gkvvi~~  334 (344)
                      .+.++.+.++++++.+++  .++++|++++++++++.+....  ...|++|++
T Consensus       293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            145788889999999875  3678999999999999988764  234888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-37  Score=277.71  Aligned_cols=311  Identities=35%  Similarity=0.508  Sum_probs=260.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++...+.+..         +.+.+.+.|. +.+++|+|++.++++|++|+..+.|.++....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~   70 (342)
T cd08266           1 MKAVVIRGHGGPEV---------LEYGDLPEPE-PGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVE   70 (342)
T ss_pred             CeEEEEecCCCccc---------eeEeecCCCC-CCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEE
Confidence            89999986554422         3445667777 5899999999999999999998887654334567889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|++++++++||+|++..                           ..|++++|+.++.   +++|+++++++++.++..
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~  150 (342)
T cd08266          71 AVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLT  150 (342)
T ss_pred             EeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhH
Confidence            9999998999999998752                           2488999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +.+||+++....++.++++++|+|+++++|++++++++..|++++++++++++.+.++.++.+.+++..+.+.   ...+
T Consensus       151 ~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  227 (342)
T cd08266         151 FLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDF---VREV  227 (342)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHH---HHHH
Confidence            9999999888889999999999999889999999999999999999999999999888888877776655444   4455


Q ss_pred             HHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      ...+.+.++|++++++|...+..++++++++|+++.++..............+.+++++.+.....         ...+.
T Consensus       228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  298 (342)
T cd08266         228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---------KAELD  298 (342)
T ss_pred             HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---------HHHHH
Confidence            555666689999999999888899999999999999987654322333334577888888876543         35788


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +++++++++.+++.+++.|++++++++++.+.++...+|++++
T Consensus       299 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         299 EALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             HHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            8999999999988888999999999999999988888899875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-37  Score=279.91  Aligned_cols=306  Identities=24%  Similarity=0.330  Sum_probs=246.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC----------CCCCCCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ----------EKPPLPFV   70 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~   70 (344)
                      |||+++..+ .            +.+++++.|+ ++++||+|++.++++|+.|+....|...          ....+|.+
T Consensus         1 m~a~~~~~~-~------------~~~~~~~~p~-~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~   66 (341)
T cd08262           1 MRAAVFRDG-P------------LVVRDVPDPE-PGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIV   66 (341)
T ss_pred             CceEEEeCC-c------------eEEEecCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcc
Confidence            899999765 2            5557889999 5999999999999999999998877321          12235788


Q ss_pred             cCcceeEEEEEeCCCCCC-CCCCCEEEEec-----------------CCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           71 PGSDYSGTVDAVGPNVSN-FKVGDTVCGFA-----------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        71 ~G~e~~G~V~~~g~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      +|+|++|+|+++|+++++ +++||+|+++.                 ..|+|++|+.++.   +++|+++++++++ ++.
T Consensus        67 ~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~  145 (341)
T cd08262          67 LGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTE  145 (341)
T ss_pred             cccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhh
Confidence            999999999999999987 99999999872                 3589999999998   9999999999887 667


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      ++++||+++ ..++++++++|||+|+ |++|.+++|+|+.+|++ ++++++++++.+.++++|++.+++++..+..+...
T Consensus       146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  223 (341)
T cd08262         146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA  223 (341)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence            899999985 7889999999999976 99999999999999996 66777788889999999998888876654322222


Q ss_pred             HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          209 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      .+.+.+.+.++|+++||+|+ ..+..++++++++|+++.+|....... ......+.+++++.+.....         .+
T Consensus       224 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~  293 (341)
T cd08262         224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQFSLGYT---------PE  293 (341)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEEEeccc---------HH
Confidence            34455566789999999987 467888999999999999987643222 12122245666666543221         35


Q ss_pred             HHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          288 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      .+.++++++++|.+.+  .+.+.|++++++++++.+.+++..||+|++
T Consensus       294 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         294 EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            7788999999999985  357899999999999999999989999863

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.2e-37  Score=280.21  Aligned_cols=298  Identities=25%  Similarity=0.340  Sum_probs=251.2

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      |+++.+..+.-           +.+++++.|. |+++||+||+.++++|++|+..+.|.+. ...+|.++|||++|+|++
T Consensus         1 ~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~V~~   67 (337)
T cd05283           1 KGYAARDASGK-----------LEPFTFERRP-LGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVVA   67 (337)
T ss_pred             CceEEecCCCC-----------ceEEeccCCC-CCCCeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceeeEEEE
Confidence            57777776642           6678899999 5999999999999999999999888763 345688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEe-----------------------------------cCCCceeeEEeecc---cCCCCCCCHHH
Q 019196           82 VGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQ---FPVPKGCDLLA  123 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~  123 (344)
                      +|++++++++||+|+..                                   ...|+|++|+.++.   +++|+++++++
T Consensus        68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~  147 (337)
T cd05283          68 VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAA  147 (337)
T ss_pred             ECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHH
Confidence            99999999999999731                                   23589999999998   99999999999


Q ss_pred             HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       124 aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      ++.+++.+.+||+++.. ..++++++++|.|+ |++|++++++++.+|++++++++++++.+.++++|++.+++....+.
T Consensus       148 aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  225 (337)
T cd05283         148 AAPLLCAGITVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEA  225 (337)
T ss_pred             hhhhhhHHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhh
Confidence            99999999999999854 56899999999775 99999999999999999999999999999999999988887654332


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  282 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (344)
                         ...     .+.++|++|||++.. ....++++++++|+++.+|...... ..+...++.+++++.++....      
T Consensus       226 ---~~~-----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~------  290 (337)
T cd05283         226 ---MKK-----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGG------  290 (337)
T ss_pred             ---hhh-----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccC------
Confidence               111     246799999999986 4788999999999999999765432 344455577899999877553      


Q ss_pred             hhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          283 HVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                         .+.++.++++++++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       291 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         291 ---RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ---HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence               36788899999999998754 789999999999999999999998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=7.4e-37  Score=275.20  Aligned_cols=317  Identities=27%  Similarity=0.317  Sum_probs=258.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++++++.      ...+..++++.|+ +.++||+|++.++++|++|+..+.+.++ ....|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~   72 (336)
T cd08252           1 MKAIGFTQPLPITD------PDSLIDIELPKPV-PGGRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASGVVE   72 (336)
T ss_pred             CceEEecCCCCCCc------ccceeEccCCCCC-CCCCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEEEEE
Confidence            89999999888641      1124456788888 5899999999999999999998777654 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC-----CCE
Q 019196           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQV  149 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~  149 (344)
                      .+|+++..+++||+|++..   .+|+|++|+.++.   +++|+++++++++.++..+.+||+++...+.+++     +++
T Consensus        73 ~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~  152 (336)
T cd08252          73 AVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKT  152 (336)
T ss_pred             EcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCE
Confidence            9999999999999999864   4689999999998   9999999999999999999999999888888887     999


Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      |+|+|++|++|++++++++.+| ++|+++++++++.+.++++|++.+++... ++   ...+. ...++++|++|||++.
T Consensus       153 vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~---~~~i~-~~~~~~~d~vl~~~~~  227 (336)
T cd08252         153 LLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DL---AEQLE-ALGIEPVDYIFCLTDT  227 (336)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cH---HHHHH-hhCCCCCCEEEEccCc
Confidence            9999988999999999999999 89999999999999999999988887664 33   23333 3344689999999985


Q ss_pred             -hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc-cccC--chhHHHHHHHHHHHHHCCceeEe
Q 019196          229 -KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHR--PHVLEDSLRELLLWAAKGLITIH  304 (344)
Q Consensus       229 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l~~g~i~~~  304 (344)
                       ..+..++++++++|+++.+|....   ..+...++.++.++.+...... ....  +....+.++++++++.+|.+++.
T Consensus       228 ~~~~~~~~~~l~~~g~~v~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (336)
T cd08252         228 DQHWDAMAELIAPQGHICLIVDPQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT  304 (336)
T ss_pred             HHHHHHHHHHhcCCCEEEEecCCCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence             678889999999999999986531   2233333467888887665331 1112  22445788899999999999865


Q ss_pred             ee---eeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          305 IS---HTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       305 ~~---~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.   ..+++++++++++.+.++...+|++++
T Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         305 LTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            32   457999999999999999888998864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.7e-37  Score=277.62  Aligned_cols=306  Identities=24%  Similarity=0.407  Sum_probs=246.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC-C-CCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-Q-EKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~   78 (344)
                      ||++++.+.++.           +.+.+.|.|. |+++||+||+.++++|++|+.++.+.. . ....+|.++|||++|+
T Consensus         1 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~   68 (341)
T PRK05396          1 MKALVKLKAEPG-----------LWLTDVPVPE-PGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGE   68 (341)
T ss_pred             CceEEEecCCCc-----------eEEEECCCCC-CCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEE
Confidence            899999887742           5567889998 699999999999999999999776532 1 1234677899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                      |+++|++++++++||+|++..                           .+|+|++|+.++.   +++|+++++++++.+ 
T Consensus        69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-  147 (341)
T PRK05396         69 VVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-  147 (341)
T ss_pred             EEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-
Confidence            999999999999999998751                           3589999999998   999999999988854 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      .++.++++++..  ...++++|+|.|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.++++++.++   .
T Consensus       148 ~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~---~  221 (341)
T PRK05396        148 DPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDL---R  221 (341)
T ss_pred             hHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---H
Confidence            677777776532  3468999999875 9999999999999999 6888888888999999999999998876665   4


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                      +.+.+.+.+.++|++|||.|. ..+..++++++++|+++.+|....... .+...++.+++++.++.....        .
T Consensus       222 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~  292 (341)
T PRK05396        222 DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMA-IDWNKVIFKGLTIKGIYGREM--------F  292 (341)
T ss_pred             HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCc-ccHHHHhhcceEEEEEEccCc--------c
Confidence            555556667789999999886 567889999999999999997653322 334556778888877642211        2


Q ss_pred             HHHHHHHHHHHCC-ceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          287 DSLRELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       287 ~~~~~~~~~l~~g-~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +.+..+++++.++ ++.+.+.+.|+++++.++++.+.++. .||+|+.+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        293 ETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             chHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            3456778888888 45556778999999999999998877 799998764

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.4e-37  Score=281.91  Aligned_cols=302  Identities=24%  Similarity=0.288  Sum_probs=244.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||++++.+++.            +.++++|.|.+|+++||+|||.++++|++|++.+.|.++  ...|+++|||++|+|+
T Consensus         1 m~~~~~~~~~~------------~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G~V~   66 (375)
T cd08282           1 MKAVVYGGPGN------------VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMGEVE   66 (375)
T ss_pred             CceEEEecCCc------------eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEEEEE
Confidence            89999977664            445788999844799999999999999999999988764  3468899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-------ec------------------------------CCCceeeEEeec----c-cCCCCC
Q 019196           81 AVGPNVSNFKVGDTVCG-------FA------------------------------ALGSFAQFIVAD----Q-FPVPKG  118 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~----~-~~~P~~  118 (344)
                      ++|+++..+++||+|+.       .+                              .+|+|++|+.++    . +++|++
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          67 EVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             EeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCC
Confidence            99999999999999975       21                              138899999997    3 899999


Q ss_pred             CCHH---HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcE
Q 019196          119 CDLL---AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDH  194 (344)
Q Consensus       119 ~~~~---~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (344)
                      ++++   +++.++..+++||+++ ..++++++++|+|.|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+. 
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-  223 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-  223 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-
Confidence            9998   5677888999999998 7889999999999776 9999999999999998 799999999999999999984 


Q ss_pred             EEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhh------------HHHHHhcccCCCEEEEEeccCCCC--------
Q 019196          195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL------------TKESLKLLNWGAQILVIGFASGEI--------  254 (344)
Q Consensus       195 v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~~--------  254 (344)
                      .+++++.++   ...+...+. +++|+++||+|.+.            +..++++++++|+++.+|......        
T Consensus       224 ~v~~~~~~~---~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~  299 (375)
T cd08282         224 PIDFSDGDP---VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAA  299 (375)
T ss_pred             EeccCcccH---HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccc
Confidence            556665554   444555555 67999999998753            788999999999999888643211        


Q ss_pred             ----CCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcce
Q 019196          255 ----PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIG  328 (344)
Q Consensus       255 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~g  328 (344)
                          ..++...++.++..+.+....         ..+.+..+++++.++++++  .+++.|++++++++++.+.++. .+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~  369 (375)
T cd08282         300 KQGELSFDFGLLWAKGLSFGTGQAP---------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET  369 (375)
T ss_pred             cCccccccHHHHHhcCcEEEEecCC---------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce
Confidence                112333345555555543221         1467888999999999986  4889999999999999999888 88


Q ss_pred             eEEEE
Q 019196          329 KVMIA  333 (344)
Q Consensus       329 kvvi~  333 (344)
                      |+|++
T Consensus       370 kvvv~  374 (375)
T cd08282         370 KVVIK  374 (375)
T ss_pred             EEEeC
Confidence            99875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-36  Score=272.10  Aligned_cols=319  Identities=33%  Similarity=0.486  Sum_probs=267.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++...+.++.         +.+++.+.|. +++++|+|+|.++++|+.|+....+.+.....+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~   70 (328)
T cd08268           1 MRAVRFHQFGGPEV---------LRIEELPVPA-PGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVE   70 (328)
T ss_pred             CeEEEEeccCCcce---------eEEeecCCCC-CCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEE
Confidence            89999987665532         4445677776 5899999999999999999988777654434557789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      .+|+++.++++||+|+++.     ..|++++|+.++.   +++|+++++++++.++.++.++|+++.....+.++++++|
T Consensus        71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli  150 (328)
T cd08268          71 AVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI  150 (328)
T ss_pred             eeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence            9999999999999999874     2489999999998   9999999999999999999999999988888999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (344)
                      +|++|++|++++++++..|+++++++++.++.+.++++|.+.+++......   ...+...+.+.++|++++|+++....
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDL---VAEVLRITGGKGVDVVFDPVGGPQFA  227 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHhCCCCceEEEECCchHhHH
Confidence            999999999999999999999999999999999888899888887766555   44455556667899999999998888


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechh
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  312 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~  312 (344)
                      .++++++++|+++.+|.........+....+.+++++.+....... ..+....+.++.+.+++.++.+.+.....|+++
T Consensus       228 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (328)
T cd08268         228 KLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT-LDPEARRRAIAFILDGLASGALKPVVDRVFPFD  306 (328)
T ss_pred             HHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc-CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHH
Confidence            8999999999999998665322223333357889999888765544 455566677888888898999887778899999


Q ss_pred             hHHHHHHHHHcCCcceeEEEE
Q 019196          313 EANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       313 ~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++.++++.+.++...+|++++
T Consensus       307 ~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         307 DIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHHHHHcCCCCceEEEe
Confidence            999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=4.9e-37  Score=277.15  Aligned_cols=302  Identities=27%  Similarity=0.398  Sum_probs=249.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.+++.+.|.+ .+++|+|++.++++|+.|+..+.|.+. ....|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~------------~~~~~~~~~~l-~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~   66 (343)
T cd08235           1 MKAAVLHGPND------------VRLEEVPVPEP-GPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIV   66 (343)
T ss_pred             CeEEEEecCCc------------eEEEEccCCCC-CCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEE
Confidence            89999988774            34567888884 899999999999999999998887653 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc--------cCCCCCCCHHHHh
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ--------FPVPKGCDLLAAA  125 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~--------~~~P~~~~~~~aa  125 (344)
                      ++|++++.+++||+|+++.                           ..|+|++|+.++.        +++|+++++.+++
T Consensus        67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa  146 (343)
T cd08235          67 EVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA  146 (343)
T ss_pred             eeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH
Confidence            9999999999999999862                           3489999999875        7899999999998


Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .+ .++.+||+++. ..+++++++|||+|+ |++|++++++|+..|++ |+++++++++.+.++++|.+.++++++.++ 
T Consensus       147 ~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~-  222 (343)
T cd08235         147 LV-EPLACCINAQR-KAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDL-  222 (343)
T ss_pred             hh-hHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCH-
Confidence            76 78999999984 558999999999975 99999999999999998 999999999999888999988888877666 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCC-CCcchhhhhccceEEEEEEeccccccCc
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHGLYWGSYKIHRP  282 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (344)
                        ...+...+.+.++|+++||++. ..+..++++++++|+++.++...... ..........+++.+.+.....      
T Consensus       223 --~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------  294 (343)
T cd08235         223 --VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS------  294 (343)
T ss_pred             --HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC------
Confidence              5556666777789999999996 47788999999999999998654321 2223334456777776654322      


Q ss_pred             hhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          283 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                         .+.++.++++++++.+++  .+...|+++++.++++.+.+++ .+|+|+
T Consensus       295 ---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         295 ---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             ---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence               356788899999999873  4678899999999999999998 899986

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.4e-37  Score=279.17  Aligned_cols=304  Identities=25%  Similarity=0.416  Sum_probs=249.2

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++.+++..           +.+++++.|. ++++||+|++.++++|++|++.+.+.+.  ..+|.++|||++|+|++
T Consensus         2 ~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~~G~V~~   67 (365)
T cd05279           2 KAAVLWEKGKP-----------LSIEEIEVAP-PKAGEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEGAGIVES   67 (365)
T ss_pred             ceeEEecCCCC-----------cEEEEeecCC-CCCCeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccceeEEEEE
Confidence            67777765543           4567889999 5999999999999999999999888654  34578999999999999


Q ss_pred             eCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc-
Q 019196           82 VGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ-  112 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~-  112 (344)
                      +|++++++++||+|+++.                                                ..|+|++|+.++. 
T Consensus        68 vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  147 (365)
T cd05279          68 IGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEI  147 (365)
T ss_pred             eCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCC
Confidence            999999999999998752                                                1368999999998 


Q ss_pred             --cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHh
Q 019196          113 --FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS  189 (344)
Q Consensus       113 --~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~  189 (344)
                        +++|+++++++++.++.++.+||+++...++++++++|||+|+ |++|++++++|+.+|++ ++++++++++.+.+++
T Consensus       148 ~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~  226 (365)
T cd05279         148 SLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ  226 (365)
T ss_pred             ceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence              9999999999999999999999999888889999999999975 99999999999999995 7777888999999999


Q ss_pred             cCCcEEEeCCCC--CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhccc-CCCEEEEEeccC-CCCCCcchhhhhc
Q 019196          190 LGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN-WGAQILVIGFAS-GEIPVIPANIALV  264 (344)
Q Consensus       190 ~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~  264 (344)
                      +|++++++..+.  +.   .+.+.+.+ +.++|+++||+|. ..+..++++++ ++|+++.+|... +....++...+ .
T Consensus       227 ~g~~~~v~~~~~~~~~---~~~l~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~  301 (365)
T cd05279         227 LGATECINPRDQDKPI---VEVLTEMT-DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-L  301 (365)
T ss_pred             hCCCeecccccccchH---HHHHHHHh-CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-h
Confidence            999988887655  33   44455555 4689999999985 67788999999 999999998753 22223333344 6


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          265 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++.++.|.+...+..      .+.+..++++++++.+++  .++++|+++++++||+.+.+++.. |+++
T Consensus       302 ~~~~l~g~~~~~~~~------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         302 TGRTIKGTVFGGWKS------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             cCCeEEEEeccCCch------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            677777765543321      467888999999999885  588899999999999998877654 6554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=3.6e-37  Score=255.31  Aligned_cols=297  Identities=28%  Similarity=0.370  Sum_probs=243.1

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCC--CCCcccCcceeEEEEE--eCCCCCCCCCCCEEEEec
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP--PLPFVPGSDYSGTVDA--VGPNVSNFKVGDTVCGFA   99 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~--~g~~~~~~~~Gd~V~~~~   99 (344)
                      +.+++.++|+ |+++|||+|+.|.+++|.    .+|.....+  ..|+-+|-..+|.++.  +-|+.+.|++||.|.+..
T Consensus        27 F~lee~~vp~-p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~  101 (340)
T COG2130          27 FRLEEVDVPE-PGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS  101 (340)
T ss_pred             ceeEeccCCC-CCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc
Confidence            7778899999 799999999999999983    233333222  2377788777653333  236788999999999985


Q ss_pred             CCCceeeEEeecc---cCCCCC---CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe
Q 019196          100 ALGSFAQFIVADQ---FPVPKG---CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT  173 (344)
Q Consensus       100 ~~g~~~~~~~~~~---~~~P~~---~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~  173 (344)
                         +|++|.+++.   .|+.++   ++..- ..+..+..|||.+|.+.++.++|++|+|.+|+|++|..+.|+||..|++
T Consensus       102 ---GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r  177 (340)
T COG2130         102 ---GWQEYAISDGEGLRKLDPSPAPLSAYL-GVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR  177 (340)
T ss_pred             ---cceEEEeechhhceecCCCCCCcchHH-hhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe
Confidence               7999999988   555543   22222 3377899999999999999999999999999999999999999999999


Q ss_pred             EEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCC
Q 019196          174 IIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       174 v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      |+.++.++||.+++++ +|+|..+||+..++   .+.+.+. ..+|+|+.|||+|++.+++.+..|+.++|++.||..++
T Consensus       178 VVGiaGg~eK~~~l~~~lGfD~~idyk~~d~---~~~L~~a-~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~  253 (340)
T COG2130         178 VVGIAGGAEKCDFLTEELGFDAGIDYKAEDF---AQALKEA-CPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQ  253 (340)
T ss_pred             EEEecCCHHHHHHHHHhcCCceeeecCcccH---HHHHHHH-CCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhh
Confidence            9999999999999987 99999999999987   4444444 45899999999999999999999999999999998764


Q ss_pred             CCCC----cc--hhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCc
Q 019196          253 EIPV----IP--ANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV  326 (344)
Q Consensus       253 ~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~  326 (344)
                      ....    .+  ...++.+.+++.|+........++   ++.++++..++++|+|+...+..-.||++|+||..|.++++
T Consensus       254 YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~---~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N  330 (340)
T COG2130         254 YNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRF---PEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKN  330 (340)
T ss_pred             cCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhh---HHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCc
Confidence            3222    11  223577799999998754433333   48889999999999999887777889999999999999999


Q ss_pred             ceeEEEEecC
Q 019196          327 IGKVMIAFDD  336 (344)
Q Consensus       327 ~gkvvi~~~~  336 (344)
                      .||.|+++.+
T Consensus       331 ~GK~vvKv~~  340 (340)
T COG2130         331 FGKLVVKVAD  340 (340)
T ss_pred             cceEEEEecC
Confidence            9999999863

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.8e-36  Score=271.26  Aligned_cols=312  Identities=25%  Similarity=0.283  Sum_probs=251.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|+++.         +.++++|.|. |+++||+|++.++++|++|+....|.+.....+|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~   70 (324)
T cd08288           1 FKALVLEKDDGGTS---------AELRELDESD-LPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVV   70 (324)
T ss_pred             CeeEEEeccCCCcc---------eEEEECCCCC-CCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEE
Confidence            99999998887643         6677899999 5999999999999999999998877654333457889999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHH--HhcCCC-CCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLS-SGQ  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~-~~~  148 (344)
                      .  ++++++++||+|+++.      .+|+|++|+.++.   +++|+++++++++.++..+++++.++.  ...... +++
T Consensus        71 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~  148 (324)
T cd08288          71 E--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDG  148 (324)
T ss_pred             e--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCC
Confidence            8  6777899999999864      3589999999998   999999999999999999999987764  123445 578


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|++|++++++|+.+|++|++++.++++.+.++++|++.++++.+..     ..+...+ ..++|.++||+++
T Consensus       149 ~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~-~~~~~~~~d~~~~  222 (324)
T cd08288         149 PVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELS-----EPGRPLQ-KERWAGAVDTVGG  222 (324)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhh-----Hhhhhhc-cCcccEEEECCcH
Confidence            999999999999999999999999999999999999999999999988865422     1223333 3358999999998


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      ..+...+..++.+|+++.+|...+.....+...++.+++++.+........   ....+.+..+.+++..+.+.+ +.+.
T Consensus       223 ~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-i~~~  298 (324)
T cd08288         223 HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI---ERRRAAWARLARDLDPALLEA-LTRE  298 (324)
T ss_pred             HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc---hhhHHHHHHHHHHHhcCCccc-ccee
Confidence            777788888999999999997532111123333447889999876433221   223567778888888998875 4689


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEe
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +++++++++++.+.+++..||+++.+
T Consensus       299 ~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         299 IPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             ecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            99999999999999999999999863

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-36  Score=272.23  Aligned_cols=311  Identities=31%  Similarity=0.484  Sum_probs=252.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++...+.++.         +.+++.+.|. |.++||+|++.++++|++|+..+.|.++....+|.++|||++|+|+.
T Consensus         2 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~   71 (331)
T cd08273           2 REVVVTRRGGPEV---------LKVVEADLPE-PAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDA   71 (331)
T ss_pred             eeEEEccCCCccc---------EEEeccCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEE
Confidence            7888888777643         6667778898 59999999999999999999988776543335688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh
Q 019196           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  158 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  158 (344)
                      +|++++++++||+|+++...|+|++|+.++.   +++|+++++++++.++.++.+||+++...+++.++++++|+|++|+
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  151 (331)
T cd08273          72 LGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG  151 (331)
T ss_pred             eCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence            9999999999999999876689999999998   9999999999999999999999999987788999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcc
Q 019196          159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  238 (344)
Q Consensus       159 ~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (344)
                      +|++++++++..|++|++++. +++.+.++++|+.. ++....++   ...  .. .++++|++++|+++.....+++++
T Consensus       152 ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~---~~~--~~-~~~~~d~vl~~~~~~~~~~~~~~l  223 (331)
T cd08273         152 VGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDW---LPA--ML-TPGGVDVVFDGVGGESYEESYAAL  223 (331)
T ss_pred             HHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcch---hhh--hc-cCCCceEEEECCchHHHHHHHHHh
Confidence            999999999999999999997 88888888899654 44444443   222  22 235799999999998888899999


Q ss_pred             cCCCEEEEEeccCCCCCC-cch--------------hhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE
Q 019196          239 NWGAQILVIGFASGEIPV-IPA--------------NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                      +++|+++.+|........ ...              ...+.++.++.+...  .....|+...+.++.++++++++.+++
T Consensus       224 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~l~~  301 (331)
T cd08273         224 APGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--DRAEDPKLFRQDLTELLDLLAKGKIRP  301 (331)
T ss_pred             cCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--hcccCHHHHHHHHHHHHHHHHCCCccC
Confidence            999999999876532211 110              011223333333332  233455556688999999999999998


Q ss_pred             eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          304 HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       304 ~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      .+.+.|++++++++++.+.++...||+|+
T Consensus       302 ~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         302 KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            78889999999999999998888888875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3e-36  Score=269.34  Aligned_cols=318  Identities=48%  Similarity=0.830  Sum_probs=265.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCC-CCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||+++..++....         +.+.+.+ |. +. +++++|++.++++|++|+..+.|.+......|+++|||++|+|
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~-~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v   69 (323)
T cd08241           1 MKAVVCKELGGPED---------LVLEEVP-PE-PGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVV   69 (323)
T ss_pred             CeEEEEecCCCcce---------eEEecCC-CC-CCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEE
Confidence            89999987665432         3345566 65 35 5999999999999999999887765433445778999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      +.+|+++.++++||+|+++...|++++++.++.   +++|++++..++++++.++.+||+++.....++++++++|+|++
T Consensus        70 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  149 (323)
T cd08241          70 EAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAA  149 (323)
T ss_pred             EEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            999999999999999999874589999999988   99999999999998999999999998778889999999999999


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      |++|++++++++..|++|++++++.++.+.++++|++.+++....++   ...+...+.+.++|.++||+|......+++
T Consensus       150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~  226 (323)
T cd08241         150 GGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDL---RERVKALTGGRGVDVVYDPVGGDVFEASLR  226 (323)
T ss_pred             chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccH---HHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence            99999999999999999999999999999999999888887666555   455566666778999999999888888999


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHH
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL  316 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~e  316 (344)
                      +++++|+++.+|..............+.+++++.+.....+....+....+.++++++++.++.+.+..++.|+++++.+
T Consensus       227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (323)
T cd08241         227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAE  306 (323)
T ss_pred             hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHH
Confidence            99999999999875433222223345678889988876665555555556788999999999999877889999999999


Q ss_pred             HHHHHHcCCcceeEEE
Q 019196          317 AFSAIEDRKVIGKVMI  332 (344)
Q Consensus       317 a~~~~~~~~~~gkvvi  332 (344)
                      +++.+.++...+|+++
T Consensus       307 ~~~~~~~~~~~~~vvv  322 (323)
T cd08241         307 ALRALADRKATGKVVL  322 (323)
T ss_pred             HHHHHHhCCCCCcEEe
Confidence            9999998888888875

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.2e-36  Score=274.62  Aligned_cols=306  Identities=28%  Similarity=0.431  Sum_probs=252.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.+++.+.|+ ++++||+|++.++++|+.|+..+.+.+.  ...|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------l~~~~~~~~~-l~~~~v~v~v~~~~~n~~d~~~~~~~~~--~~~~~~~g~~~~G~V~   65 (343)
T cd08236           1 MKALVLTGPGD------------LRYEDIPKPE-PGPGEVLVKVKACGICGSDIPRYLGTGA--YHPPLVLGHEFSGTVE   65 (343)
T ss_pred             CeeEEEecCCc------------eeEEecCCCC-CCCCeEEEEEEEEEECccchHhhcCCCC--CCCCcccCcceEEEEE
Confidence            89999988754            3457888898 4999999999999999999998877652  3457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      .+|++++++++||+|+++.                           ..|+|++|+.++.   +++|+++++++++++ ..
T Consensus        66 ~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~  144 (343)
T cd08236          66 EVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EP  144 (343)
T ss_pred             EECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-ch
Confidence            9999999999999999862                           3589999999998   999999999999887 68


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      +++||+++. ..+++++++|||+|+ |.+|++++++|+.+|++ |+++++++++.+.++++|++.++++++..    ..+
T Consensus       145 ~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~~  218 (343)
T cd08236         145 AAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED----VEK  218 (343)
T ss_pred             HHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc----HHH
Confidence            899999984 788999999999975 99999999999999997 99999999989999999998888876544    234


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCC--CCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                      +.....+.++|+++||+|. ..+..++++++++|+++.+|...+..  ...+...++.++.++.++......   + ...
T Consensus       219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~  294 (343)
T cd08236         219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA---P-FPG  294 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc---c-cch
Confidence            5555666789999999976 56788999999999999999665331  222333456788888887753321   1 224


Q ss_pred             HHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHc-CCcceeEEE
Q 019196          287 DSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIED-RKVIGKVMI  332 (344)
Q Consensus       287 ~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~-~~~~gkvvi  332 (344)
                      +.++++.++++++.+.  +.+...+++++++++++.+.+ +...||+|+
T Consensus       295 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         295 DEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            6788889999999986  446788999999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=6.4e-37  Score=277.16  Aligned_cols=317  Identities=29%  Similarity=0.358  Sum_probs=244.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCC-CCeEEEEEEEeecChhhHHHHHhcCC--------------CCC
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQ--------------EKP   65 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~I~v~~~~i~~~D~~~~~g~~~--------------~~~   65 (344)
                      |||++++++|++.        ..+.+++++.|+ |. ++||+|++.++++|++|+..+.|...              ...
T Consensus         1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~   71 (350)
T cd08248           1 MKAWQIHSYGGID--------SLLLLENARIPV-IRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGI   71 (350)
T ss_pred             CceEEecccCCCc--------ceeeecccCCCC-CCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCC
Confidence            9999999888752        234567899998 64 99999999999999999998877421              023


Q ss_pred             CCCcccCcceeEEEEEeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHH
Q 019196           66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV  139 (344)
Q Consensus        66 ~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~  139 (344)
                      ..|.++|||++|+|+.+|++++++++||+|+++.   ..|+|++|+.++.   +++|+++++++++.++..+.+||+++.
T Consensus        72 ~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~  151 (350)
T cd08248          72 EFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALV  151 (350)
T ss_pred             CCCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHH
Confidence            5588999999999999999999999999999875   2599999999998   999999999999999999999999987


Q ss_pred             HhcCCCC----CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          140 HRAQLSS----GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       140 ~~~~~~~----~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ....+.+    +++|+|+|++|++|++++++++.+|++|++++++ ++.+.++++|.+.+++..+.++   ...+.   .
T Consensus       152 ~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~---~~~l~---~  224 (350)
T cd08248         152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDF---EEELT---E  224 (350)
T ss_pred             HhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhH---HHHHH---h
Confidence            7777754    9999999998999999999999999999988865 6777888999988888765444   23222   2


Q ss_pred             CCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCC-cch-hhhhccceEEEEEEecccc------ccCchhHHH
Q 019196          216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV-IPA-NIALVKNWTVHGLYWGSYK------IHRPHVLED  287 (344)
Q Consensus       216 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  287 (344)
                      ..++|++|||+|......++++++++|+++.+|........ ... ...+..++.+.........      ........+
T Consensus       225 ~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (350)
T cd08248         225 RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGS  304 (350)
T ss_pred             cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHH
Confidence            35799999999988888999999999999999854321100 000 0000001110000000000      000011246


Q ss_pred             HHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      .+.++++++.+|.+.+.+++.|++++++++++.+.+++..+|++++
T Consensus       305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         305 ALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            7899999999999988788999999999999999988878888763

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.2e-36  Score=267.01  Aligned_cols=314  Identities=31%  Similarity=0.437  Sum_probs=257.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.+.         +.+++++.|. +.+++|+|++.++++|++|+..+.+.+.. ...|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~   69 (325)
T cd08271           1 MKAWVLPKPGAALQ---------LTLEEIEIPG-PGAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPHVPGVDGAGVVV   69 (325)
T ss_pred             CeeEEEccCCCcce---------eEEeccCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCcccccceEEEEE
Confidence            99999999885222         5567889999 59999999999999999999988775432 2236789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196           81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                      .+|++++++++||+|+++.   ..|+|++|+.++.   +++|+++++.+++.+++++.+||+++...++++++++++|+|
T Consensus        70 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g  149 (325)
T cd08271          70 AVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITG  149 (325)
T ss_pred             EeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            9999999999999999875   3589999999998   999999999999999999999999998888999999999999


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHH
Q 019196          155 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  234 (344)
Q Consensus       155 ~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (344)
                      +++++|++++++++..|++|+++. ++++.+.++++|++.+++....+.   ...+.....+.++|++++|+++......
T Consensus       150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~  225 (325)
T cd08271         150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDV---CERIKEITGGRGVDAVLDTVGGETAAAL  225 (325)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccH---HHHHHHHcCCCCCcEEEECCCcHhHHHH
Confidence            989999999999999999998887 677888888899988887766555   4455556666789999999998777788


Q ss_pred             HhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc----hhHHHHHHHHHHHHHCCceeEeeeeeec
Q 019196          235 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP----HVLEDSLRELLLWAAKGLITIHISHTYS  310 (344)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~g~i~~~~~~~~~  310 (344)
                      +++++++|+++.++......    ....+.+++.+....+.......+    ....+.+.++++++.++.+++...+.|+
T Consensus       226 ~~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (325)
T cd08271         226 APTLAFNGHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLP  301 (325)
T ss_pred             HHhhccCCEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEc
Confidence            99999999999987543221    112234455555544433222222    3445778889999999999877778999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEE
Q 019196          311 PSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       311 l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++++.++++.+.++...+|++++
T Consensus       302 ~~~~~~a~~~~~~~~~~~kiv~~  324 (325)
T cd08271         302 FEQLPEALRALKDRHTRGKIVVT  324 (325)
T ss_pred             HHHHHHHHHHHHcCCccceEEEE
Confidence            99999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.9e-36  Score=271.44  Aligned_cols=303  Identities=25%  Similarity=0.344  Sum_probs=246.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.+.+.|.|.+++++||+||+.++++|++|+..+.|.++  ...|.++|||++|+|+
T Consensus         1 m~~~~~~~~~~------------~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~   66 (345)
T cd08287           1 MRATVIHGPGD------------IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP--TRAPAPIGHEFVGVVE   66 (345)
T ss_pred             CceeEEecCCc------------eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC--CCCCcccccceEEEEE
Confidence            89999987665            345778888833899999999999999999998887654  2457899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-ec--------------------------CCCceeeEEeec----c-cCCCCCCCHHHHh---
Q 019196           81 AVGPNVSNFKVGDTVCG-FA--------------------------ALGSFAQFIVAD----Q-FPVPKGCDLLAAA---  125 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~-~~--------------------------~~g~~~~~~~~~----~-~~~P~~~~~~~aa---  125 (344)
                      ++|+++.++++||+|++ +.                          .+|++++|+.++    . +++|++++++.+.   
T Consensus        67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~  146 (345)
T cd08287          67 EVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPS  146 (345)
T ss_pred             EeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhh
Confidence            99999999999999986 21                          128899999997    3 9999999982221   


Q ss_pred             --hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCC
Q 019196          126 --ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNES  202 (344)
Q Consensus       126 --~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~  202 (344)
                        .+...+++||+++ +.++++++++|+|.| +|++|++++++|+..|++ ++++++++++.+.++++|++.++++...+
T Consensus       147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~  224 (345)
T cd08287         147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE  224 (345)
T ss_pred             hHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc
Confidence              2236788999998 578899999999977 599999999999999995 78888888888888999999999887766


Q ss_pred             chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC
Q 019196          203 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  281 (344)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (344)
                      +   .+++.+.+.+.++|+++||+|+ ..+..++++++++|+++.+|..... ...+....+.+++++.+....      
T Consensus       225 ~---~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~------  294 (345)
T cd08287         225 A---VARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG-VELDVRELFFRNVGLAGGPAP------  294 (345)
T ss_pred             H---HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC-CccCHHHHHhcceEEEEecCC------
Confidence            5   5666667777789999999986 5778899999999999999866532 223333557888888774321      


Q ss_pred             chhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          282 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       282 ~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                         ..+.++++++++.++.+++  .+++.|++++++++++.+.+++.. |++|+
T Consensus       295 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         295 ---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             ---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence               2468899999999999986  467899999999999998877655 88885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=6.4e-36  Score=264.97  Aligned_cols=296  Identities=31%  Similarity=0.520  Sum_probs=248.3

Q ss_pred             CCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEec--CCCceeeEE
Q 019196           31 IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA--ALGSFAQFI  108 (344)
Q Consensus        31 ~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~--~~g~~~~~~  108 (344)
                      .|. +.+++|+|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|++++++++||+|+++.  .+|+|++|+
T Consensus         2 ~p~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~   80 (303)
T cd08251           2 VAP-PGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLV   80 (303)
T ss_pred             CCC-CCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEE
Confidence            466 48899999999999999999998876654445688999999999999999999999999999875  358999999


Q ss_pred             eecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH
Q 019196          109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK  185 (344)
Q Consensus       109 ~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~  185 (344)
                      .++.   +++|++++++++++++..+.+||+++ +..+++++++++|+++++++|++++++++.+|++|+++++++++.+
T Consensus        81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  159 (303)
T cd08251          81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE  159 (303)
T ss_pred             EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            9998   99999999999999999999999998 5788999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCC-CCcchhhhhc
Q 019196          186 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALV  264 (344)
Q Consensus       186 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~  264 (344)
                      .++++|++.+++....+.   ...+...+.+.++|+++||+++.....++++++++|+++.+|...... ...... .+.
T Consensus       160 ~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~  235 (303)
T cd08251         160 YLKQLGVPHVINYVEEDF---EEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VLS  235 (303)
T ss_pred             HHHHcCCCEEEeCCCccH---HHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-Hhh
Confidence            999999998888776655   455666677778999999999888888999999999999998654221 112211 244


Q ss_pred             cceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          265 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++..+............++...+.+.++++++++|.+++..++.|++++++++++.+.+++..||+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         236 NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            45555555543333345555567888999999999998778899999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=9.7e-36  Score=267.70  Aligned_cols=298  Identities=26%  Similarity=0.411  Sum_probs=246.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.+.+.+.|. +.++||+||+.++++|+.|+....|.++.  .+|.++|+|++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~~~-l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~   65 (334)
T cd08234           1 MKALVYEGPGE------------LEVEEVPVPE-PGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVV   65 (334)
T ss_pred             CeeEEecCCCc------------eEEEeccCCC-CCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEE
Confidence            89999988774            4457889999 49999999999999999999988887643  367899999999999


Q ss_pred             EeCCCCCCCCCCCEEEE-------------------------e--cCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCG-------------------------F--AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~-------------------------~--~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      .+|++++++++||+|++                         +  ...|++++|+.++.   +++|+++++.+++.+ ..
T Consensus        66 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~  144 (334)
T cd08234          66 AVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EP  144 (334)
T ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hH
Confidence            99999999999999986                         1  13589999999998   999999999999866 78


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      +.++++++ ..++++++++|||+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|++.+++..+.+.   ...
T Consensus       145 ~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~  219 (334)
T cd08234         145 LSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDP---EAQ  219 (334)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCH---HHH
Confidence            88999998 7889999999999976 99999999999999997 899999999999999999888887766554   222


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                        +.+.+.++|++|||++. .....++++++++|+++.+|..... ........++.+++++.+....          .+
T Consensus       220 --~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  287 (334)
T cd08234         220 --KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----------PY  287 (334)
T ss_pred             --HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----------HH
Confidence              34556789999999975 5678899999999999999865431 1122223334467777776521          35


Q ss_pred             HHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          288 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      .+++++++++++++++  .++.+|++++++++++.+.+ ...||+|+
T Consensus       288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            6888999999999874  36788999999999999998 77888886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9e-36  Score=266.89  Aligned_cols=294  Identities=31%  Similarity=0.460  Sum_probs=236.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++ .+.         +.+++.+.|+ ++++||+|++.++++|++|+....+. .. ..+|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~-~~~---------~~~~~~~~~~-~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~   67 (325)
T cd08264           1 MKALVFEKSG-IEN---------LKVEDVKDPK-PGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVE   67 (325)
T ss_pred             CeeEEeccCC-CCc---------eEEEeccCCC-CCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEE
Confidence            8999998766 322         4445677777 59999999999999999999887642 11 2357789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      .+|++++.+++||+|+++.                           ..|+|++|+.++.   +++|+++++++++.++..
T Consensus        68 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~  147 (325)
T cd08264          68 EVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVA  147 (325)
T ss_pred             EECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhh
Confidence            9999999999999998651                           3589999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +.+||+++. .++++++++++|+|++|.+|++++++|+.+|++|+++++    .+.++++|++.+++.++  .   ...+
T Consensus       148 ~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~---~~~l  217 (325)
T cd08264         148 ALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--V---EEKV  217 (325)
T ss_pred             hHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--H---HHHH
Confidence            999999985 488999999999999999999999999999999988863    36678899888886543  2   2334


Q ss_pred             HHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      .+.+  +++|+++||+|...+..++++++++|+++.+|.........+...++.++.++.+...+.         ++.++
T Consensus       218 ~~~~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  286 (325)
T cd08264         218 KEIT--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT---------RKELL  286 (325)
T ss_pred             HHHh--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC---------HHHHH
Confidence            4444  579999999998888999999999999999987532223344455566777777754332         36677


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeE
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV  330 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkv  330 (344)
                      ++++++...+  ..+.+.|+++++++|++.+.++...+|+
T Consensus       287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            8888886444  4566889999999999999988777665

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.1e-35  Score=267.95  Aligned_cols=304  Identities=26%  Similarity=0.390  Sum_probs=243.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC--CCCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~   78 (344)
                      |||++++.+|+.           +.+.+.+.|. |+++||+||+.++++|+.|+..+.+..  ......|.++|+|++|+
T Consensus         1 ~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~   68 (341)
T cd05281           1 MKAIVKTKAGPG-----------AELVEVPVPK-PGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGE   68 (341)
T ss_pred             CcceEEecCCCc-----------eEEEeCCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEE
Confidence            899999987752           5567889898 699999999999999999998765432  11223567899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                      |+.+|++++.+++||+|+++.                           ..|+|++|+.++.   +++|++++.+.+ +++
T Consensus        69 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~  147 (341)
T cd05281          69 VVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQ  147 (341)
T ss_pred             EEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhh
Confidence            999999999999999998851                           2489999999998   999999998555 567


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      .++.++++++.  ...+++++|||.|+ |++|++++++|+..|+ +|+++++++++...++++|++++++.+..++   .
T Consensus       148 ~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~  221 (341)
T cd05281         148 EPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDV---V  221 (341)
T ss_pred             hHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccH---H
Confidence            88899998874  45678999999876 9999999999999999 7999988888888889999988887766555   4


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                       .+.+.+.++++|++|||+|. .....++++++++|+++.+|.............+..+++.+.+.....        ..
T Consensus       222 -~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  292 (341)
T cd05281         222 -EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--------MF  292 (341)
T ss_pred             -HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCC--------cc
Confidence             56666777789999999976 567888999999999999986543221111123556777776654211        12


Q ss_pred             HHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          287 DSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       287 ~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.+.++++++.++.+.  +.+...+++++++++|+.+.+++ .||+|+.
T Consensus       293 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         293 ETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             hhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence            4577888999999986  34678899999999999999988 8999875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.3e-35  Score=268.77  Aligned_cols=317  Identities=25%  Similarity=0.355  Sum_probs=239.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      |++++.+.+++..         +...++|.|++|+++||+|++.++++|++|+..+.+........|.++|+|++|+|++
T Consensus         2 ~~~~~~~~~~~~~---------~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~   72 (352)
T cd08247           2 KALTFKNNTSPLT---------ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVK   72 (352)
T ss_pred             ceEEEecCCCcce---------eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEE
Confidence            7889988877632         3334555554349999999999999999999877543221112377899999999999


Q ss_pred             eCCCCC-CCCCCCEEEEec-----CCCceeeEEeecc-------cCCCCCCCHHHHhhccchHHHHHHHHHHhc-CCCCC
Q 019196           82 VGPNVS-NFKVGDTVCGFA-----ALGSFAQFIVADQ-------FPVPKGCDLLAAAALPVAFGTSHVALVHRA-QLSSG  147 (344)
Q Consensus        82 ~g~~~~-~~~~Gd~V~~~~-----~~g~~~~~~~~~~-------~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~  147 (344)
                      +|++++ +|++||+|+++.     ..|+|++|++++.       +++|+++++++++.++..+.|||+++.... +++++
T Consensus        73 vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g  152 (352)
T cd08247          73 VGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPD  152 (352)
T ss_pred             eCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCC
Confidence            999998 899999999875     2589999999874       789999999999999999999999997777 79999


Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCC---chhhHHHHHHHhc-CCCccE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC-GA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES---VIPSVKEFLKARK-LKGVDV  221 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~~~~~~-~~~~d~  221 (344)
                      ++++|+|+++++|++++++|+.+ +. .++++. ++++.+.++++|++.+++..+.+   .   ..++.+.+. ++++|+
T Consensus       153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~d~  228 (352)
T cd08247         153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKL---LKPVLENVKGQGKFDL  228 (352)
T ss_pred             CeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccch---HHHHHHhhcCCCCceE
Confidence            99999999999999999999987 44 566665 45556678899999888876654   3   445555544 678999


Q ss_pred             EEeCCCh-hhHHHHHhccc---CCCEEEEEeccCC-CCCCcc---------hhhhhccceEEEEEEeccccccCchhHHH
Q 019196          222 LYDPVGG-KLTKESLKLLN---WGAQILVIGFASG-EIPVIP---------ANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       222 vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      +|||+|+ .....++++++   ++|+++.++.... +....+         ....+.++.++....+.... ..+.  .+
T Consensus       229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~  305 (352)
T cd08247         229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-LDPN--AD  305 (352)
T ss_pred             EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-ecCC--HH
Confidence            9999998 57778899999   9999998752211 100000         00112222222222211111 1122  36


Q ss_pred             HHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++.+++++.++.+++.+.+.|++++++++++.+.+++..||+++.+
T Consensus       306 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         306 WIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            78889999999999987889999999999999999998899999853

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.5e-35  Score=266.94  Aligned_cols=294  Identities=24%  Similarity=0.361  Sum_probs=235.7

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC--CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEE----
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----   97 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~----   97 (344)
                      +.+++.|.|. |+++||+|++.++++|++|+..+.+...  ....+|.++|+|++|+|+.+|++++++++||+|++    
T Consensus        11 ~~l~~~~~p~-~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   89 (340)
T TIGR00692        11 AELTEVPVPE-PGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHI   89 (340)
T ss_pred             cEEEECCCCC-CCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcC
Confidence            5567889999 6999999999999999999988755421  12235678999999999999999999999999987    


Q ss_pred             -----------------------ecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           98 -----------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        98 -----------------------~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                                             +...|+|++|+.++.   +++|++++++++ +++.++.+|++++  ....+++++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vl  166 (340)
T TIGR00692        90 VCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVL  166 (340)
T ss_pred             CCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEE
Confidence                                   224589999999998   999999998655 4678999999886  44578899999


Q ss_pred             EecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-h
Q 019196          152 VLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-K  229 (344)
Q Consensus       152 I~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~  229 (344)
                      |.|+ |++|.+++++++.+|++ |+++.+++++.+.++++|++.++++...++   .+.+.+.+.++++|+++||++. .
T Consensus       167 I~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~l~~~~~~~~~d~vld~~g~~~  242 (340)
T TIGR00692       167 VTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDV---VKEVADLTDGEGVDVFLEMSGAPK  242 (340)
T ss_pred             EECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCH---HHHHHHhcCCCCCCEEEECCCCHH
Confidence            9775 99999999999999996 888888888888889999988888776666   4555566667789999999885 5


Q ss_pred             hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--Eeeee
Q 019196          230 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISH  307 (344)
Q Consensus       230 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~  307 (344)
                      .+...+++++++|+++.+|.............++.+++++.+....        ...+.+.++++++++++++  +.+.+
T Consensus       243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~  314 (340)
T TIGR00692       243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--------HMFETWYTVSRLIQSGKLDLDPIITH  314 (340)
T ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecC--------CchhhHHHHHHHHHcCCCChHHheee
Confidence            6788999999999999999764322211122455667777664411        1135678899999999987  45789


Q ss_pred             eechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          308 TYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       308 ~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++++++.++++.+.+++. ||+|+.+
T Consensus       315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       315 KFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            9999999999999988874 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.5e-35  Score=265.94  Aligned_cols=297  Identities=28%  Similarity=0.400  Sum_probs=241.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+.+++..      .. +.+.+.+.|. ++++||+||+.++++|++|+..+.|.++. ...|.++|||++|+|+
T Consensus         1 ~~~~~~~~~~~~~~------~~-~~~~~~~~~~-~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~   71 (329)
T cd08298           1 MKAMVLEKPGPIEE------NP-LRLTEVPVPE-PGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVE   71 (329)
T ss_pred             CeEEEEecCCCCCC------CC-ceEEeccCCC-CCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEE
Confidence            89999988885310      01 3335677777 59999999999999999999998887643 3568899999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      .+|+++.++++||+|+..                            ..+|+|++|+.++.   +++|+++++.+++.+++
T Consensus        72 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~  151 (329)
T cd08298          72 AVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC  151 (329)
T ss_pred             EECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence            999999999999999752                            12589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      ++.+||+++ ..+++++++++||+|+ |++|++++++++..|++|+++++++++++.++++|++.+++....        
T Consensus       152 ~~~ta~~~~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------  221 (329)
T cd08298         152 AGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------  221 (329)
T ss_pred             hhHHHHHHH-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------
Confidence            999999998 8899999999999975 999999999999999999999999999999999999877765432        


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                           .++++|+++++.+. ..++.++++++++|+++.+|.........+... +.++..+.+.....         .+.
T Consensus       222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~---------~~~  286 (329)
T cd08298         222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT---------RQD  286 (329)
T ss_pred             -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC---------HHH
Confidence                 23579999998654 677889999999999999885432222222222 34455555543221         467


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++.++++++++.+++. .+.|+++++++|++.+.+++..||+|+
T Consensus       287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            8889999999998874 588999999999999999998888874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.2e-35  Score=266.18  Aligned_cols=294  Identities=25%  Similarity=0.391  Sum_probs=237.0

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhc-CCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEE----
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-YQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----   97 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~----   97 (344)
                      +.+++.+.|. |.++||+|+|.++++|+.|++.+.+. ... ....|.++|+|++|+|+++|++++++++||+|++    
T Consensus        10 ~~~~~~~~~~-l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   88 (343)
T cd05285          10 LRLEERPIPE-PGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGV   88 (343)
T ss_pred             eeEEECCCCC-CCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEcccc
Confidence            4557889898 59999999999999999999876422 111 1135778999999999999999999999999986    


Q ss_pred             --------------------ec----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEE
Q 019196           98 --------------------FA----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL  150 (344)
Q Consensus        98 --------------------~~----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~v  150 (344)
                                          +.    ..|+|++|+.++.   +++|+++++++++++ .++++||+++ ..+++++++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~v  166 (343)
T cd05285          89 PCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTV  166 (343)
T ss_pred             CCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence                                21    2489999999998   999999999999877 6889999997 88999999999


Q ss_pred             EEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh
Q 019196          151 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (344)
                      ||.|+ |++|++++++|+.+|++ |+++++++++.+.++++|++.+++.++.+......++...+.+.++|++|||+|..
T Consensus       167 lI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  245 (343)
T cd05285         167 LVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAE  245 (343)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCH
Confidence            99876 99999999999999997 99999999999999999999998877654311133455566677899999999975


Q ss_pred             -hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--Eeee
Q 019196          230 -LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHIS  306 (344)
Q Consensus       230 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~  306 (344)
                       .+..++++++++|+++.+|..... ...+......+++.+.++...          .+.++.++++++++.+.  +.+.
T Consensus       246 ~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~l~~~~~~~  314 (343)
T cd05285         246 SCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRY----------ANTYPTAIELLASGKVDVKPLIT  314 (343)
T ss_pred             HHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccC----------hHHHHHHHHHHHcCCCCchHhEE
Confidence             788899999999999999865433 223333455667777665422          15678889999999875  3467


Q ss_pred             eeechhhHHHHHHHHHcCC-cceeEEE
Q 019196          307 HTYSPSEANLAFSAIEDRK-VIGKVMI  332 (344)
Q Consensus       307 ~~~~l~~~~ea~~~~~~~~-~~gkvvi  332 (344)
                      +.|+++++.++++.+.+++ ..+|+++
T Consensus       315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         315 HRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            8899999999999999875 3489988

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-35  Score=265.55  Aligned_cols=284  Identities=25%  Similarity=0.329  Sum_probs=233.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++            +.+++++.|+ ++++||+||+.++++|++|+....|.++    .|.++|||++|+|+
T Consensus         1 ~~a~~~~~~~~------------~~~~~~~~p~-~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv   63 (319)
T cd08242           1 MKALVLDGGLD------------LRVEDLPKPE-PPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVE   63 (319)
T ss_pred             CeeEEEeCCCc------------EEEEECCCCC-CCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEE
Confidence            89999987653            5567899999 5999999999999999999998887653    47789999999999


Q ss_pred             EeCCCCCCCCCCCEEEE---------------------------e-cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCG---------------------------F-AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~---------------------------~-~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++   +++||+|..                           + ..+|+|++|+.++.   +++|+++++++++.+ .
T Consensus        64 ~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~  139 (319)
T cd08242          64 EGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-E  139 (319)
T ss_pred             EeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-h
Confidence            99987   679999863                           1 13589999999999   999999999988864 4


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      +..++|.++ +..+++++++|||+|+ |++|++++|+|+.+|++|++++.++++.+.++++|++.++++...        
T Consensus       140 ~~~~~~~~~-~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------  209 (319)
T cd08242         140 PLAAALEIL-EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE--------  209 (319)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------
Confidence            556666555 7788999999999975 999999999999999999999999999999999999887765432        


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                          +.+.++|+++||+|. ..+..++++++++|+++..+..... ...+...++.++.++.+....            .
T Consensus       210 ----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~------------~  272 (319)
T cd08242         210 ----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP-ASFDLTKAVVNEITLVGSRCG------------P  272 (319)
T ss_pred             ----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-CccCHHHheecceEEEEEecc------------c
Confidence                245689999999987 5678889999999999987654432 223444566788888776432            2


Q ss_pred             HHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          289 LRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       289 ~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ++++++++++++++  +.+++.|+++++.+||+.+.++. .+|+|++
T Consensus       273 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         273 FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            67788999999994  56789999999999999998776 4799875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.3e-35  Score=268.61  Aligned_cols=293  Identities=25%  Similarity=0.361  Sum_probs=236.3

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC------CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEE
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG   97 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~   97 (344)
                      +.++++|.|+ ++++||+|++.++++|++|++.+.+..      +....+|.++|||++|+|+++|++++++++||+|++
T Consensus        39 ~~~~~~~~p~-~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          39 LRVEDVPVPN-LKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             EEEEECCCCC-CCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            5567899999 599999999999999999999876321      112346789999999999999999999999999985


Q ss_pred             ---------------------------ecCCCceeeEEeecc---cCCCCC-------CCHHHHhhccchHHHHHHHHHH
Q 019196           98 ---------------------------FAALGSFAQFIVADQ---FPVPKG-------CDLLAAAALPVAFGTSHVALVH  140 (344)
Q Consensus        98 ---------------------------~~~~g~~~~~~~~~~---~~~P~~-------~~~~~aa~l~~~~~ta~~~l~~  140 (344)
                                                 +..+|+|++|+.++.   +++|++       ++.+ +++++.++++||+++..
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~  196 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI  196 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence                                       434689999999998   899986       4455 55677899999999865


Q ss_pred             h-cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhc
Q 019196          141 R-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARK  215 (344)
Q Consensus       141 ~-~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~  215 (344)
                      . .+++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.++++.+.   ++   ...+.+.+.
T Consensus       197 ~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~~v~~~~~  272 (384)
T cd08265         197 RGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLS---GEKVMEVTK  272 (384)
T ss_pred             hcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccH---HHHHHHhcC
Confidence            5 68999999999965 9999999999999999 79999998898889999999988887643   44   556667777


Q ss_pred             CCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHH
Q 019196          216 LKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL  293 (344)
Q Consensus       216 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (344)
                      +.++|+++||+|.  ..+..++++++++|+++.+|....... .....+..+..++.+......        ...+.+++
T Consensus       273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~  343 (384)
T cd08265         273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVP-LHLEVLQVRRAQIVGAQGHSG--------HGIFPSVI  343 (384)
T ss_pred             CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCc-ccHHHHhhCceEEEEeeccCC--------cchHHHHH
Confidence            7899999999986  367889999999999999986543222 233445566667776643211        24688899


Q ss_pred             HHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          294 LWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       294 ~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ++++++.+++  .+++.|+++++.+|++.+.++ ..||+|+
T Consensus       344 ~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         344 KLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            9999999986  367889999999999986655 5778875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=3.9e-35  Score=263.35  Aligned_cols=298  Identities=29%  Similarity=0.420  Sum_probs=246.0

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++.++|..           +.+++.|.|. +.++||+|++.++++|++|+..+.+.+.. ..+|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~   67 (330)
T cd08245           1 KAAVVHAAGGP-----------LEPEEVPVPE-PGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVE   67 (330)
T ss_pred             CeEEEecCCCC-----------ceEEeccCCC-CCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEE
Confidence            68889887532           5557889998 59999999999999999999998886642 35688999999999999


Q ss_pred             eCCCCCCCCCCCEEE----------------------------EecCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           82 VGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      +|++++++++||+|+                            ++...|+|++|+.++.   +++|+++++.+++.++..
T Consensus        68 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~  147 (330)
T cd08245          68 VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCA  147 (330)
T ss_pred             ECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhh
Confidence            999999999999997                            3323589999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      +.+||+++. ..+++++++|||+|+ |++|++++++|+.+|++|+++++++++.+.++++|++.+++......   ... 
T Consensus       148 ~~ta~~~l~-~~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-  221 (330)
T cd08245         148 GITVYSALR-DAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELD---EQA-  221 (330)
T ss_pred             HHHHHHHHH-hhCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcch---HHh-
Confidence            999999985 478999999999976 88999999999999999999999999999999999888877654333   111 


Q ss_pred             HHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL  289 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (344)
                         . .+++|++++|++. .....++++++++|+++.++.............++.++.++.++..+.         ...+
T Consensus       222 ---~-~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  288 (330)
T cd08245         222 ---A-AGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---------RADL  288 (330)
T ss_pred             ---c-cCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---------HHHH
Confidence               2 2479999999775 677889999999999999986543322222334566777777776433         3678


Q ss_pred             HHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          290 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       290 ~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      +++++++.++.+++ ..+.|++++++++++.+.+++..||+|+
T Consensus       289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            88899999999886 4578999999999999999998888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=1.2e-34  Score=257.53  Aligned_cols=301  Identities=33%  Similarity=0.469  Sum_probs=250.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC--CCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (344)
                      |||+++..++....         +.+++.+.|. ++++||+|++.++++|+.|+..+.|...  .....|..+|||++|+
T Consensus         1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~   70 (309)
T cd05289           1 MKAVRIHEYGGPEV---------LELADVPTPE-PGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGV   70 (309)
T ss_pred             CceEEEcccCCccc---------eeecccCCCC-CCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEE
Confidence            89999988776532         3346677777 5999999999999999999998877542  1234578899999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      |+.+|++++++++||+|+++.   ..|+|++|+.++.   +++|+++++.+++.++..+.++|+++.....+.++++++|
T Consensus        71 v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv  150 (309)
T cd05289          71 VVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLI  150 (309)
T ss_pred             EEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEE
Confidence            999999999999999999986   2489999999988   9999999999999999999999999977777999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (344)
                      +|++|.+|++++++++..|++|++++.+. +.+.++++|.+.+++....+.   ..    .+.+.++|++++|+++....
T Consensus       151 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~---~~----~~~~~~~d~v~~~~~~~~~~  222 (309)
T cd05289         151 HGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDF---ER----AAAPGGVDAVLDTVGGETLA  222 (309)
T ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCch---hh----ccCCCCceEEEECCchHHHH
Confidence            99999999999999999999999998877 788888899888887665544   11    34556899999999998888


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechh
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS  312 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~  312 (344)
                      .++++++++|+++.+|.......     ..+.+++++......      +.  .+.+++++++++++.+.+.+++.|+++
T Consensus       223 ~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (309)
T cd05289         223 RSLALVKPGGRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE------PD--GEQLAELAELVEAGKLRPVVDRVFPLE  289 (309)
T ss_pred             HHHHHHhcCcEEEEEcCCCcchh-----hhhhccceEEEEEec------cc--HHHHHHHHHHHHCCCEEEeeccEEcHH
Confidence            99999999999999986543211     334556666655431      11  468889999999999988888999999


Q ss_pred             hHHHHHHHHHcCCcceeEEE
Q 019196          313 EANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       313 ~~~ea~~~~~~~~~~gkvvi  332 (344)
                      +++++++.+.++...+|+|+
T Consensus       290 ~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         290 DAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHHHHHHhCCCCCcEeC
Confidence            99999999998887778763

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=7.2e-35  Score=261.52  Aligned_cols=312  Identities=25%  Similarity=0.298  Sum_probs=247.4

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTV   79 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V   79 (344)
                      |||++++.++-     .+....+.+++++.|. +.++||+||+.++++|+.|.....+....  +...+.++|+|++|+|
T Consensus         3 ~~~~~~~~~~~-----~~~~~~~~~~~~~~p~-~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   76 (329)
T cd05288           3 RQVVLAKRPEG-----PPPPDDFELVEVPLPE-LKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV   76 (329)
T ss_pred             cEEEEeccCCC-----CCCccceeEEeccCCC-CCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEE
Confidence            67888764421     0123346778899999 59999999999999999887655442111  1123567899999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCceeeEEeecc----cCCCCCCC--HHHHhh-ccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ----FPVPKGCD--LLAAAA-LPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~----~~~P~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      +++|++  ++++||+|+++   ++|++|+.++.    +++|++++  +.++++ +++++.+||+++.....+.++++|||
T Consensus        77 ~~~G~~--~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI  151 (329)
T cd05288          77 VESRSP--DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV  151 (329)
T ss_pred             EecCCC--CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence            999964  79999999987   47999998863    89999995  555555 88999999999987788999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  231 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (344)
                      +|++|++|++++++++..|++|+++++++++.+.+++ +|++.++++++.++   ...+...+. +++|++|||+|+..+
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~v~~~~~-~~~d~vi~~~g~~~~  227 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDL---AEALKEAAP-DGIDVYFDNVGGEIL  227 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhH---HHHHHHhcc-CCceEEEEcchHHHH
Confidence            9988999999999999999999999999999999988 99998888876555   444555553 689999999999888


Q ss_pred             HHHHhcccCCCEEEEEeccCCCCCC-----cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeee
Q 019196          232 KESLKLLNWGAQILVIGFASGEIPV-----IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHIS  306 (344)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~  306 (344)
                      ..++++++++|+++.+|........     .+....+.+++++.+.......    ....+.+.++++++.++.+++...
T Consensus       228 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~  303 (329)
T cd05288         228 DAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA----DRFPEALAELAKWLAEGKLKYRED  303 (329)
T ss_pred             HHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH----HHHHHHHHHHHHHHHCCCcccccc
Confidence            9999999999999999866543211     2234457788888877653321    233567888999999999987666


Q ss_pred             eeechhhHHHHHHHHHcCCcceeEEE
Q 019196          307 HTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       307 ~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ..+++++++++++.+.+++..||+++
T Consensus       304 ~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         304 VVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccHHHHHHHHHHHhcCCCccceeC
Confidence            77999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.7e-35  Score=258.73  Aligned_cols=295  Identities=24%  Similarity=0.347  Sum_probs=238.9

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHH-HhcCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCC
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI-LGKYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL  101 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~-~g~~~~-~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~  101 (344)
                      +.+++++.|+ +.++||+|++.++++|++|+..+ .|.... .+..|.++|+|++|+|+.+|++++++++||+|+++.. 
T Consensus         7 ~~~~~~~~~~-l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-   84 (312)
T cd08269           7 FEVEEHPRPT-PGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSG-   84 (312)
T ss_pred             eEEEECCCCC-CCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecC-
Confidence            6667899999 59999999999999999999887 665422 1234778999999999999999999999999999864 


Q ss_pred             CceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEE
Q 019196          102 GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAV  177 (344)
Q Consensus       102 g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~  177 (344)
                      |+|++|+.++.   +++|+++  ..++....+++++++++. .++++++++++|+|+ |++|.+++++|+.+|++ |+++
T Consensus        85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~  160 (312)
T cd08269          85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI  160 (312)
T ss_pred             CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence            89999999998   9999998  233322378899999985 888999999999975 99999999999999998 9999


Q ss_pred             ecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCC
Q 019196          178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPV  256 (344)
Q Consensus       178 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~  256 (344)
                      ++++++.+.++++|++.+++.+..++   ...+.+.+.+.++|+++||+|. .....++++++++|+++.+|........
T Consensus       161 ~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~  237 (312)
T cd08269         161 DRRPARLALARELGATEVVTDDSEAI---VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRP  237 (312)
T ss_pred             CCCHHHHHHHHHhCCceEecCCCcCH---HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcc
Confidence            99998999889999988887666565   5556666777889999999976 5678899999999999999865422222


Q ss_pred             cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCc-ceeEEE
Q 019196          257 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMI  332 (344)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~-~gkvvi  332 (344)
                      .+...+..++..+.++...     .+....+.+++++++++++.+++  .+.+.|++++++++++.+.+++. .+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         238 VPFQTWNWKGIDLINAVER-----DPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             cCHHHHhhcCCEEEEeccc-----CccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            3333455677776655422     22233578999999999999986  46788999999999999998864 578776

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=9.6e-35  Score=261.77  Aligned_cols=290  Identities=27%  Similarity=0.458  Sum_probs=232.6

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHH-hcCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEe---
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF---   98 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~---   98 (344)
                      +.+++.+.|. ++++||+||+.++++|++|+..+. +.+.. ....|+++|+|++|+|+++|++++++++||+|++.   
T Consensus         9 ~~~~~~~~p~-l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~   87 (339)
T cd08232           9 LRVEERPAPE-PGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSR   87 (339)
T ss_pred             eEEEEcCCCC-CCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCC
Confidence            5567789999 599999999999999999998763 32211 12357789999999999999999999999999862   


Q ss_pred             ----------------------c-------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC
Q 019196           99 ----------------------A-------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS  146 (344)
Q Consensus        99 ----------------------~-------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  146 (344)
                                            .       .+|+|++|+.++.   +++|+++++++|+. +.+++++|+++...... +
T Consensus        88 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~  165 (339)
T cd08232          88 PCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-A  165 (339)
T ss_pred             cCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-C
Confidence                                  1       2589999999998   99999999999876 57889999998666556 8


Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++|||.|+ |++|++++++|+.+|+ +++++++++++.+.++++|++.++++++...    .+.  .....++|+++||
T Consensus       166 ~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~--~~~~~~vd~vld~  238 (339)
T cd08232         166 GKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAY--AADKGDFDVVFEA  238 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhh--hccCCCccEEEEC
Confidence            999999875 9999999999999999 8999999888888889999988887765431    111  1123469999999


Q ss_pred             CCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE-
Q 019196          226 VGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI-  303 (344)
Q Consensus       226 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~-  303 (344)
                      ++. ..+..++++++++|+++.+|...... ......++.+++++.+....          .+.+++++++++++.+++ 
T Consensus       239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~  307 (339)
T cd08232         239 SGAPAALASALRVVRPGGTVVQVGMLGGPV-PLPLNALVAKELDLRGSFRF----------DDEFAEAVRLLAAGRIDVR  307 (339)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEecCCCCc-cCcHHHHhhcceEEEEEecC----------HHHHHHHHHHHHcCCCCch
Confidence            985 67788999999999999998644221 12223345677777765421          356788999999999874 


Q ss_pred             -eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          304 -HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       304 -~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                       .+.++|++++++++++.+.++...||+|+++
T Consensus       308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence             4778999999999999999888899999863

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-34  Score=257.57  Aligned_cols=317  Identities=35%  Similarity=0.525  Sum_probs=253.5

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      ||+++...+.+..         +.+.+.+.|. |.++||+|++.++++|+.|+....|.++..+..|.++|||++|+|+.
T Consensus         1 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~   70 (337)
T cd08275           1 RAVVLTGFGGLDK---------LKVEKEALPE-PSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEA   70 (337)
T ss_pred             CeEEEcCCCCccc---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEE
Confidence            5677766555422         4445667777 58999999999999999999988776543345577899999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh
Q 019196           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  158 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  158 (344)
                      +|++++++++||+|+++...|+|++|+.++.   +++|+++++.+++.++.++.++|+++....+++++++|+|+|++|+
T Consensus        71 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~  150 (337)
T cd08275          71 VGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG  150 (337)
T ss_pred             ECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence            9999999999999999876789999999988   9999999999999999999999999988889999999999999999


Q ss_pred             HHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          159 VGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       159 ~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      +|++++++++.. +..++.. ..+++.+.++++|.+.+++....++   ...+...+ +.++|+++||+|+.....++++
T Consensus       151 ~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~  225 (337)
T cd08275         151 VGLAAGQLCKTVPNVTVVGT-ASASKHEALKENGVTHVIDYRTQDY---VEEVKKIS-PEGVDIVLDALGGEDTRKSYDL  225 (337)
T ss_pred             HHHHHHHHHHHccCcEEEEe-CCHHHHHHHHHcCCcEEeeCCCCcH---HHHHHHHh-CCCceEEEECCcHHHHHHHHHh
Confidence            999999999998 4333333 2355778888899888888776655   34444444 4689999999998888889999


Q ss_pred             ccCCCEEEEEeccCCCCC----------------CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCce
Q 019196          238 LNWGAQILVIGFASGEIP----------------VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI  301 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i  301 (344)
                      ++++|+++.+|.......                ......++.+++++.++.........+ .....+.++++++.++.+
T Consensus       226 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  304 (337)
T cd08275         226 LKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERE-LLTEVMDKLLKLYEEGKI  304 (337)
T ss_pred             hccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChH-HHHHHHHHHHHHHHCCCC
Confidence            999999999986542110                011134578888888887654333333 334568889999999999


Q ss_pred             eEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          302 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       302 ~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++..++.|++++++++++.+.++...||+++++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         305 KPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             CCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            877788999999999999999988889998763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.5e-34  Score=262.76  Aligned_cols=294  Identities=27%  Similarity=0.363  Sum_probs=231.1

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEe---
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF---   98 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~---   98 (344)
                      +.+++.+.|. |+++||+||+.++++|++|++.+.+....  ....|.++|||++|+|+++|+++++|++||+|++.   
T Consensus        29 l~~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  107 (364)
T PLN02702         29 LKIQPFKLPP-LGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGI  107 (364)
T ss_pred             eEEEeccCCC-CCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCC
Confidence            3346778887 69999999999999999999988763211  11247789999999999999999999999999862   


Q ss_pred             ----------------------c---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEE
Q 019196           99 ----------------------A---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL  150 (344)
Q Consensus        99 ----------------------~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~v  150 (344)
                                            .   ..|+|++|+.++.   +++|+++++.++++. .+++++|+++ ...++.++++|
T Consensus       108 ~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~v  185 (364)
T PLN02702        108 SCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNV  185 (364)
T ss_pred             CCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence                                  1   1489999999998   999999999998853 4566788887 77889999999


Q ss_pred             EEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          151 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ||+|+ |++|++++++++..|++ ++++++++++.+.++++|++.+++++.  .++.+.+..+.+ ..+.++|++|||+|
T Consensus       186 lI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~vid~~g  263 (364)
T PLN02702        186 LVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQK-AMGGGIDVSFDCVG  263 (364)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhh-hcCCCCCEEEECCC
Confidence            99975 99999999999999995 777888888888899999998877542  334222222222 23457999999999


Q ss_pred             -hhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--Ee
Q 019196          228 -GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IH  304 (344)
Q Consensus       228 -~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~  304 (344)
                       ...+..++++++++|+++.+|...+. ...+...+..+++++.+++..          ...++.++++++++.+.  +.
T Consensus       264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~~~l~~~~~  332 (364)
T PLN02702        264 FNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFRY----------RNTWPLCLEFLRSGKIDVKPL  332 (364)
T ss_pred             CHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEeccC----------hHHHHHHHHHHHcCCCCchHh
Confidence             46789999999999999999965433 223444567788888876532          14567889999999886  34


Q ss_pred             eeeeech--hhHHHHHHHHHcCCcceeEEEE
Q 019196          305 ISHTYSP--SEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       305 ~~~~~~l--~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.+.|++  +++++|++.+.+++..+|+|+.
T Consensus       333 ~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        333 ITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             eEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            6778555  8999999999988888899984

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.9e-34  Score=255.80  Aligned_cols=272  Identities=28%  Similarity=0.424  Sum_probs=226.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++.++ +         .+.+++++.|. +.++||+|++.++++|++|+....+.+. ....|.++|+|++|+|+
T Consensus         1 ~~~~~~~~~~~-~---------~~~~~~~~~p~-~~~~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~~G~V~   68 (306)
T cd08258           1 MKALVKTGPGP-G---------NVELREVPEPE-PGPGEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEFSGTIV   68 (306)
T ss_pred             CeeEEEecCCC-C---------ceEEeecCCCC-CCCCeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccceEEEEE
Confidence            89999877442 1         15668899999 5999999999999999999998887652 23457789999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      .+|++++.+++||+|+++.                            ..|+|++|+.++.   +++|+++++++++ ++.
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~  147 (306)
T cd08258          69 EVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTE  147 (306)
T ss_pred             EECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhc
Confidence            9999999999999998864                            1489999999998   9999999999887 778


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe--cCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      .++++|+++...++++++++|||.| +|++|.+++++|+.+|++|+++.  ++.++.+.++++|++.+ ++...++   .
T Consensus       148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~---~  222 (306)
T cd08258         148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDL---A  222 (306)
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCH---H
Confidence            8999999998888999999999976 59999999999999999987763  34557788889999877 7766666   4


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                      ..+...+.+.++|+++||+|. ..+..++++++++|+++.+|...+....++...++.+++++.|++++.         .
T Consensus       223 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~  293 (306)
T cd08258         223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---------P  293 (306)
T ss_pred             HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---------h
Confidence            555555666789999999975 677889999999999999998763333455566778999999998765         4


Q ss_pred             HHHHHHHHHHHCC
Q 019196          287 DSLRELLLWAAKG  299 (344)
Q Consensus       287 ~~~~~~~~~l~~g  299 (344)
                      ++++++++++++|
T Consensus       294 ~~~~~~~~~~~~~  306 (306)
T cd08258         294 ASWETALRLLASG  306 (306)
T ss_pred             HhHHHHHHHHhcC
Confidence            6788999988875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=4.2e-34  Score=251.56  Aligned_cols=287  Identities=33%  Similarity=0.465  Sum_probs=241.1

Q ss_pred             CeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cC
Q 019196           38 TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FP  114 (344)
Q Consensus        38 ~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~  114 (344)
                      +||+|++.++++|++|++...|.+   ..+|.++|||++|+|+++|++++++++||+|+++.. |+|++|+.++.   ++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~   76 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP-GAFATHVRVDARLVVK   76 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEec-CcccceEEechhheEe
Confidence            589999999999999999887764   245778999999999999999999999999999864 89999999988   99


Q ss_pred             CCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC--C
Q 019196          115 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG--V  192 (344)
Q Consensus       115 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g--~  192 (344)
                      +|+++++.+++.+++++.++|+++.+..+++++++++|+|++|++|++++++++.+|++++++++++++.+.+++++  +
T Consensus        77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~  156 (293)
T cd05195          77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV  156 (293)
T ss_pred             CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence            99999999999999999999999988889999999999998899999999999999999999999999999998887  6


Q ss_pred             cEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCC-CCcchhhhhccceEEEE
Q 019196          193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHG  271 (344)
Q Consensus       193 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~  271 (344)
                      +.+++....++   .+.+.+.+.+.++|+++||+++..+..++++++++|+++.+|...... .... ...+.+++++..
T Consensus       157 ~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~  232 (293)
T cd05195         157 DHIFSSRDLSF---ADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLG-MRPFLRNVSFSS  232 (293)
T ss_pred             ceEeecCchhH---HHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccc-hhhhccCCeEEE
Confidence            77777655444   455666666778999999999988899999999999999998654321 1111 122455677777


Q ss_pred             EEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          272 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ..........+....+.+..++++++++.+++.....+++++++++++.+.++...+|+|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         233 VDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             EeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            6655443344445567888999999999998878888999999999999998888888763

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-33  Score=250.41  Aligned_cols=290  Identities=31%  Similarity=0.446  Sum_probs=231.6

Q ss_pred             eecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecC--
Q 019196           25 LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA--  100 (344)
Q Consensus        25 ~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~--  100 (344)
                      .+++.+.|. |+++||+|++.++++|++|+....|.++.  ....|..+|||++|+|+++|+++.++++||+|+++..  
T Consensus        15 ~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~   93 (319)
T cd08267          15 LEVEVPIPT-PKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK   93 (319)
T ss_pred             ccccCCCCC-CCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC
Confidence            667889898 69999999999999999999988775521  1234668999999999999999999999999998863  


Q ss_pred             -CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEE
Q 019196          101 -LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA  176 (344)
Q Consensus       101 -~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~  176 (344)
                       .|+|++|+.++.   +++|+++++++++.++.++.+||+++....+++++++|+|+|++|++|++++++++.+|++|++
T Consensus        94 ~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~  173 (319)
T cd08267          94 GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTG  173 (319)
T ss_pred             CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEE
Confidence             589999999988   9999999999999999999999999987778999999999999999999999999999999999


Q ss_pred             EecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh--hHHHHHhcccCCCEEEEEeccCCCC
Q 019196          177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEI  254 (344)
Q Consensus       177 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~  254 (344)
                      ++++ ++.+.++++|.+.+++....++   .   ...+.++++|++++|+++.  ........++++|+++.+|......
T Consensus       174 ~~~~-~~~~~~~~~g~~~~~~~~~~~~---~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~  246 (319)
T cd08267         174 VCST-RNAELVRSLGADEVIDYTTEDF---V---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL  246 (319)
T ss_pred             EeCH-HHHHHHHHcCCCEeecCCCCCc---c---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc
Confidence            8865 7888889999888887665444   1   3345567899999999853  3333444599999999998654321


Q ss_pred             CCcc----hh-hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCccee
Q 019196          255 PVIP----AN-IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK  329 (344)
Q Consensus       255 ~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gk  329 (344)
                      ....    .. ....+.+.  ....      .+.  .+.++++++++.++++++.+++.|++++++++++.+.++...+|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~--~~~~------~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~  316 (319)
T cd08267         247 LLVLLLLPLTLGGGGRRLK--FFLA------KPN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGK  316 (319)
T ss_pred             cccccccchhhccccceEE--EEEe------cCC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCc
Confidence            1111    01 11112222  1111      111  57889999999999999888899999999999999998887778


Q ss_pred             EEE
Q 019196          330 VMI  332 (344)
Q Consensus       330 vvi  332 (344)
                      +++
T Consensus       317 vvv  319 (319)
T cd08267         317 VVI  319 (319)
T ss_pred             EeC
Confidence            763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=2.7e-33  Score=231.42  Aligned_cols=297  Identities=22%  Similarity=0.255  Sum_probs=241.1

Q ss_pred             ccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccC----cceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019196           28 TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG----SDYSGTVDAVGPNVSNFKVGDTVCGFAALGS  103 (344)
Q Consensus        28 ~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~  103 (344)
                      +.+.+..+++++|+||..|.+..|.-........+..--.|+.+|    ..++|+|++  |+.+++++||.|+++.   +
T Consensus        28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~---g  102 (343)
T KOG1196|consen   28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV---G  102 (343)
T ss_pred             eecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---c
Confidence            344334358999999999999988743322211111111244444    367888888  6778999999999997   7


Q ss_pred             eeeEEeecc-----cCC--CCCCCHHHHhh-ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEE
Q 019196          104 FAQFIVADQ-----FPV--PKGCDLLAAAA-LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII  175 (344)
Q Consensus       104 ~~~~~~~~~-----~~~--P~~~~~~~aa~-l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~  175 (344)
                      |.||.++++     +++  |.+.++.-... +..+.+|||-++++....+.+++|+|.||+|++|+++.|+|+.+||+|+
T Consensus       103 Weeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VV  182 (343)
T KOG1196|consen  103 WEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVV  182 (343)
T ss_pred             ceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEE
Confidence            999999877     444  45565544433 6789999999999999999999999999999999999999999999999


Q ss_pred             EEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCC
Q 019196          176 AVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI  254 (344)
Q Consensus       176 ~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  254 (344)
                      .++.++||...++ ++|.+..+||.++..   ..+.++.....|+|+.||++|+...++.+..|+..|+++.+|+.+...
T Consensus       183 GsaGS~EKv~ll~~~~G~d~afNYK~e~~---~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  183 GSAGSKEKVDLLKTKFGFDDAFNYKEESD---LSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYN  259 (343)
T ss_pred             EecCChhhhhhhHhccCCccceeccCccC---HHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhcc
Confidence            9999999999996 579999999999865   566777788889999999999999999999999999999999877432


Q ss_pred             CC-----cchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCccee
Q 019196          255 PV-----IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK  329 (344)
Q Consensus       255 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gk  329 (344)
                      ..     .....++.|++.+.|+....+.+..    .+.++.+..++++|+|+...+-.-.|++.++||.-|.++++.||
T Consensus       260 ~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~----~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGK  335 (343)
T KOG1196|consen  260 LENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY----PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGK  335 (343)
T ss_pred             ccCCccccchhhheeeeEEeeeEEeechhhhh----HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccc
Confidence            22     2224578999999997766654433    57889999999999999887777789999999999999999999


Q ss_pred             EEEEecC
Q 019196          330 VMIAFDD  336 (344)
Q Consensus       330 vvi~~~~  336 (344)
                      .++++..
T Consensus       336 qiv~va~  342 (343)
T KOG1196|consen  336 QLVKVAR  342 (343)
T ss_pred             eEEEeec
Confidence            9999875

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=4.8e-33  Score=244.47  Aligned_cols=281  Identities=34%  Similarity=0.527  Sum_probs=234.2

Q ss_pred             EEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCC
Q 019196           42 VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKG  118 (344)
Q Consensus        42 I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~  118 (344)
                      ||+.++++|++|++...|.++    .|.++|||++|+|+++|++++++++||+|+++.. |+|++|+.++.   +++|++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~~p~~   76 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLVVPIPDG   76 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHeEECCCC
Confidence            899999999999998877653    3578999999999999999999999999999864 89999999988   999999


Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC--cEEE
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVV  196 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~v~  196 (344)
                      +++.+++.+++.+.++|+++.....+.++++|+|+|++|.+|++++++++..|++|+++++++++.+.++++|+  +.++
T Consensus        77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~  156 (288)
T smart00829       77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF  156 (288)
T ss_pred             CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence            99999999999999999998788899999999999988999999999999999999999999999999999998  6777


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEec
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      +..+.+.   .+.+...+.++++|+++|++++..+..++++++++|+++.+|..... ....+.. .+.+++++.+..+.
T Consensus       157 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (288)
T smart00829      157 SSRDLSF---ADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMA-PFRRNVSYHAVDLD  232 (288)
T ss_pred             eCCCccH---HHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchh-hhcCCceEEEEEHH
Confidence            7766555   44555566667899999999988888899999999999999865421 1112222 25667777776654


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ... ..+....+.+..++++++++++++...+.|+++++.++++.+..+...+|+++
T Consensus       233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      233 ALE-EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             Hhh-cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            332 23333456778889999999988766788999999999999998877778763

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=5.3e-33  Score=262.33  Aligned_cols=293  Identities=23%  Similarity=0.315  Sum_probs=253.8

Q ss_pred             CCCeEEEEEEEeecChhhHHHHHhcCCCCC------CCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEe
Q 019196           36 SSTAVRVRVKATSLNYANYLQILGKYQEKP------PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIV  109 (344)
Q Consensus        36 ~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~  109 (344)
                      .++.=+--|.|+.+|..|+....|+.+...      ....++|-||+|+          .+-|.||+++.+--++++.+.
T Consensus      1443 ~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvpAksLATt~l 1512 (2376)
T KOG1202|consen 1443 CPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVPAKSLATTVL 1512 (2376)
T ss_pred             CCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeeehhhhhhhhh
Confidence            566677889999999999999999876321      2345788899887          466999999998788998888


Q ss_pred             ecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHH
Q 019196          110 ADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  186 (344)
Q Consensus       110 ~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~  186 (344)
                      +..   |.+|++..+++|++.|+-|+|+|++|..+...++|+++||++++|++|++++.+|-++|++||.++.+.||+++
T Consensus      1513 ~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRef 1592 (2376)
T KOG1202|consen 1513 ASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREF 1592 (2376)
T ss_pred             cchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHH
Confidence            777   99999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhh
Q 019196          187 LKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA  262 (344)
Q Consensus       187 ~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  262 (344)
                      +++    +....+.|.++.++   -..+++.|.|+|+|+|+|....+.++.+++||+.+|+|..+|...-.....-....
T Consensus      1593 L~~rFPqLqe~~~~NSRdtsF---Eq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMav 1669 (2376)
T KOG1202|consen 1593 LLKRFPQLQETNFANSRDTSF---EQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAV 1669 (2376)
T ss_pred             HHHhchhhhhhcccccccccH---HHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhh
Confidence            853    34667778888888   55677889999999999999999999999999999999999966533333333456


Q ss_pred             hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCCCCcC
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSIR  341 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~~~~~  341 (344)
                      |.+|.+++|..+.++.....+.+.+...-+.+-+++|.++|+.+.+|+-.++++||+.|.+++++||+|+++..++-.+
T Consensus      1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE~~k 1748 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEEPAK 1748 (2376)
T ss_pred             hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccccccc
Confidence            8999999999998888777666677777777778889999999999999999999999999999999999997665543

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.4e-32  Score=239.20  Aligned_cols=229  Identities=20%  Similarity=0.250  Sum_probs=188.5

Q ss_pred             ccCcceeEEEEEeCCCCC------CCCCCCEEEEe----------------------------------cCCCceeeEEe
Q 019196           70 VPGSDYSGTVDAVGPNVS------NFKVGDTVCGF----------------------------------AALGSFAQFIV  109 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~------~~~~Gd~V~~~----------------------------------~~~g~~~~~~~  109 (344)
                      ++|||++|+|+++|++++      ++++||||...                                  ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999998      89999999531                                  02489999999


Q ss_pred             ecc----cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHH
Q 019196          110 ADQ----FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI  184 (344)
Q Consensus       110 ~~~----~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~  184 (344)
                      +++    +++|+++++++++.+++.+.|+|+++. .....++++|||+|+ |++|++++|+|+.+|++ |++++++++|+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            976    889999999999999999999999984 455669999999988 99999999999999996 88898899999


Q ss_pred             HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC-CCCCcchhhh
Q 019196          185 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIA  262 (344)
Q Consensus       185 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~  262 (344)
                      +.++++|++.+++..+  .   .+.+.+.+.+.++|++|||+|. ..++.++++++++|+++.+|...+ ....++...+
T Consensus       159 ~~a~~~Ga~~~i~~~~--~---~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~  233 (280)
T TIGR03366       159 ELALSFGATALAEPEV--L---AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV  233 (280)
T ss_pred             HHHHHcCCcEecCchh--h---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence            9999999998887543  2   2344555666789999999986 567889999999999999997542 2234556678


Q ss_pred             hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCC--cee--EeeeeeechhhH
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG--LIT--IHISHTYSPSEA  314 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~i~--~~~~~~~~l~~~  314 (344)
                      +.+++++.|+....         .+.++++++++.++  +++  ..++++|+++|+
T Consensus       234 ~~~~~~i~g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       234 VRRWLTIRGVHNYE---------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HhCCcEEEecCCCC---------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            88999999876433         35788999999874  444  468899999873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.9e-31  Score=230.51  Aligned_cols=233  Identities=38%  Similarity=0.567  Sum_probs=199.7

Q ss_pred             eEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEec-------------------
Q 019196           39 AVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-------------------   99 (344)
Q Consensus        39 eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~-------------------   99 (344)
                      ||+|+|.++++|+.|+..+.|.++.....|.++|+|++|+|+++|++++.+++||+|+++.                   
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            6899999999999999998887642335578899999999999999999999999999875                   


Q ss_pred             ----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC
Q 019196          100 ----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA  172 (344)
Q Consensus       100 ----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~  172 (344)
                          ..|+|++|+.++.   +++|+++++++++.++.++.+||+++.....++++++|||+|+++ +|++++++++..|.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence                2589999999998   999999999999999999999999997777779999999999955 99999999999999


Q ss_pred             eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       173 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|+++++++++.+.++++|++.+++..+.+.   ...+. ...+.++|+++||++. .....++++++++|+++.++...
T Consensus       160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         160 RVIVTDRSDEKLELAKELGADHVIDYKEEDL---EEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             eEEEEcCCHHHHHHHHHhCCceeccCCcCCH---HHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence            9999999999999999999888887766655   33333 4556789999999998 77888999999999999999776


Q ss_pred             CCCCCcchhhhhccceEEEEEEecc
Q 019196          252 GEIPVIPANIALVKNWTVHGLYWGS  276 (344)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~  276 (344)
                      ...........+.+++++.++..+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~  260 (271)
T cd05188         236 GGPPLDDLRRLLFKELTIIGSTGGT  260 (271)
T ss_pred             CCCCcccHHHHHhcceEEEEeecCC
Confidence            5433333445688999999887654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=9.4e-29  Score=216.47  Aligned_cols=248  Identities=25%  Similarity=0.340  Sum_probs=198.9

Q ss_pred             CCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhc
Q 019196           66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRA  142 (344)
Q Consensus        66 ~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  142 (344)
                      ++|.++|||++|+|+++|++++++++||+|+++.   +|++|+.++.   +++|+++++.+++.+ .++++||+++ ..+
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~   93 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDA   93 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC---CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-Hhc
Confidence            5789999999999999999999999999999974   6999999998   999999999999988 8899999998 578


Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ++++++++||+|+ |.+|++++++|+.+|++ |+++++++++.+.++++| ++.+++...           ..+.+.++|
T Consensus        94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d  161 (277)
T cd08255          94 EPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGAD  161 (277)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCC
Confidence            8999999999976 99999999999999998 999999999999889998 454443221           112456899


Q ss_pred             EEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc---hhHHHHHHHHHHHH
Q 019196          221 VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP---HVLEDSLRELLLWA  296 (344)
Q Consensus       221 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l  296 (344)
                      ++|||++. .....++++++++|+++.+|..... .......+..+.+++.+..........+   ....+.++++++++
T Consensus       162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (277)
T cd08255         162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL  240 (277)
T ss_pred             EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence            99999875 6778899999999999999976544 2222222344566777766543322221   12236788999999


Q ss_pred             HCCceeEeeeeeechhhHHHHHHHHHcC-CcceeEE
Q 019196          297 AKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVM  331 (344)
Q Consensus       297 ~~g~i~~~~~~~~~l~~~~ea~~~~~~~-~~~gkvv  331 (344)
                      +++.+++.+.+.|+++++.++++.+.++ ....|++
T Consensus       241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             HcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence            9999988788999999999999999877 3344655

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.78  E-value=6e-18  Score=130.65  Aligned_cols=128  Identities=37%  Similarity=0.576  Sum_probs=113.8

Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC-hhhHHHHHh
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLK  236 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-~~~~~~~~~  236 (344)
                      ++|++++|+|+..|++|++++++++|++.++++|++.++++++.++   .+++.+.+++.++|++|||+| .+.++.++.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~---~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDF---VEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSH---HHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhccccccccccccc---ccccccccccccceEEEEecCcHHHHHHHHH
Confidence            6899999999999999999999999999999999999999999887   777777888789999999999 688899999


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHH
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA  297 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  297 (344)
                      +++++|+++.+|.........+...++.+++++.|+..++         .+.++++++++.
T Consensus        78 ~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~la  129 (130)
T PF00107_consen   78 LLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---------PEDFQEALQLLA  129 (130)
T ss_dssp             HEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---------HHHHHHHHHHHH
T ss_pred             HhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---------HHHHHHHHHHhc
Confidence            9999999999999885555577788899999999998766         466777777765

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.69  E-value=5.4e-17  Score=120.99  Aligned_cols=61  Identities=34%  Similarity=0.500  Sum_probs=53.0

Q ss_pred             CCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEE
Q 019196           37 STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG   97 (344)
Q Consensus        37 ~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~   97 (344)
                      |+||+|||.+++||++|++.+.|........|+++|||++|+|+++|+++++|++||+|+.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~   61 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVV   61 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEE
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeee
Confidence            6899999999999999999999854455688999999999999999999999999999964

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.54  E-value=9.8e-15  Score=112.12  Aligned_cols=124  Identities=29%  Similarity=0.405  Sum_probs=80.3

Q ss_pred             cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC--hhhH-HHHHhcccCCCEEEEEeccCCCCCCcchhhhhccc
Q 019196          190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--GKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKN  266 (344)
Q Consensus       190 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  266 (344)
                      ||+++++|++..++          +...+||+||||+|  .+.+ ..+.+++ ++|+++.++.   .   ........+.
T Consensus         1 LGAd~vidy~~~~~----------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~---~---~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRDTDF----------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG---D---LPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTCSHH----------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S---H---HHHHHHHHHC
T ss_pred             CCcCEEecCCCccc----------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC---c---ccchhhhhcc
Confidence            68999999985443          34678999999999  6544 6777888 9999999873   0   0000111122


Q ss_pred             eEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEE
Q 019196          267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI  332 (344)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi  332 (344)
                      ..+....+......  ....+.++++.+++++|++++.+.++||++++++|++.+++++..||+|+
T Consensus        64 ~~~~~~~~~~~~~~--~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPN--AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--H--HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCC--chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222222211000  22356799999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.41  E-value=6.4e-12  Score=113.53  Aligned_cols=175  Identities=17%  Similarity=0.131  Sum_probs=131.8

Q ss_pred             HHHHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          135 HVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       135 ~~~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      |.++.+..++ -+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.|...++.+|++.+ +         .++..  
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~---------~~e~v--  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T---------MEEAV--  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c---------HHHHH--
Confidence            4455444443 58999999999 999999999999999999999999999999999998433 1         11111  


Q ss_pred             hcCCCccEEEeCCChh-hHHH-HHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH-
Q 019196          214 RKLKGVDVLYDPVGGK-LTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR-  290 (344)
Q Consensus       214 ~~~~~~d~vid~~g~~-~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  290 (344)
                         .++|+||+|+|.. .+.. .+..++++|+++.+|...   ..++...+..+++++.++......        ..++ 
T Consensus       256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~--------~~~~~  321 (413)
T cd00401         256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDR--------YELPD  321 (413)
T ss_pred             ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcce--------EEcCC
Confidence               3689999999974 4555 489999999999999542   236666777888888887653211        1233 


Q ss_pred             -HHHHHHHCCce-e--Eeeeee-----echh-hHHHHHHHHHcCCc-ceeEEEEecC
Q 019196          291 -ELLLWAAKGLI-T--IHISHT-----YSPS-EANLAFSAIEDRKV-IGKVMIAFDD  336 (344)
Q Consensus       291 -~~~~~l~~g~i-~--~~~~~~-----~~l~-~~~ea~~~~~~~~~-~gkvvi~~~~  336 (344)
                       ..+.++.+|++ +  +.+++.     |+|+ ++.+++..+.++.. ..|+++.+++
T Consensus       322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~  378 (413)
T cd00401         322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK  378 (413)
T ss_pred             cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence             68899999998 4  457788     8999 99999998887654 2477666543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.41  E-value=1.1e-11  Score=114.80  Aligned_cols=150  Identities=21%  Similarity=0.250  Sum_probs=107.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCCCCc----------hhhHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV----------IPSVKEFLK  212 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~----------~~~~~~~~~  212 (344)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++++|++.+ ++..+.+.          .+..+...+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            357899999999 999999999999999999999999999999999999854 55432210          010111222


Q ss_pred             H-hc-CCCccEEEeCCChh------h-HHHHHhcccCCCEEEEEeccCCCC--CCcchhhhhc-cceEEEEEEecccccc
Q 019196          213 A-RK-LKGVDVLYDPVGGK------L-TKESLKLLNWGAQILVIGFASGEI--PVIPANIALV-KNWTVHGLYWGSYKIH  280 (344)
Q Consensus       213 ~-~~-~~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~  280 (344)
                      . .. .+++|++|+|++.+      . .++.++.++++|++++++...+..  ...+...++. +++++.|....     
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~-----  315 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL-----  315 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC-----
Confidence            2 11 24799999999853      3 488999999999999999864331  2233445555 89999987621     


Q ss_pred             CchhHHHHHHHHHHHHHCCceeE
Q 019196          281 RPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                       |   .+.-....+++.++.++.
T Consensus       316 -P---~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        316 -P---SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -c---hhHHHHHHHHHHhCCccH
Confidence             1   133345788888888764

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.70  E-value=4.3e-07  Score=84.37  Aligned_cols=107  Identities=23%  Similarity=0.350  Sum_probs=79.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCCC-----Cc-----hhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNE-----SV-----IPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~-----~~-----~~~~~~~~~~~  214 (344)
                      ++.+|+|+|+ |.+|+++++.++.+|++|++++.+.++++.++++|++.+ ++..+.     .+     .+..+...+..
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~  241 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF  241 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence            5689999999 999999999999999999999999999999999998652 221110     00     11122222222


Q ss_pred             c--CCCccEEEeCC---Ch--h--hHHHHHhcccCCCEEEEEeccCCC
Q 019196          215 K--LKGVDVLYDPV---GG--K--LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       215 ~--~~~~d~vid~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      .  ..++|++|+|+   |.  +  ..++.++.|++++.+++++...+.
T Consensus       242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GG  289 (511)
T TIGR00561       242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGG  289 (511)
T ss_pred             HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence            2  35799999999   53  3  347789999999999999876543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.48  E-value=9.4e-06  Score=71.30  Aligned_cols=95  Identities=23%  Similarity=0.371  Sum_probs=75.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|+|+|. |.+|+.+++.++.+|++|++.+++.++.+.++++|+..+ .+         .++.+..  .++|+||+|
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~---------~~l~~~l--~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL---------SELAEEV--GKIDIIFNT  217 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH---------HHHHHHh--CCCCEEEEC
Confidence            5789999999 999999999999999999999999988888888886532 11         1122222  369999999


Q ss_pred             CChhhH-HHHHhcccCCCEEEEEeccCCC
Q 019196          226 VGGKLT-KESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       226 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      ++...+ ...+..+++++.+++++...+.
T Consensus       218 ~p~~~i~~~~l~~~~~g~vIIDla~~pgg  246 (296)
T PRK08306        218 IPALVLTKEVLSKMPPEALIIDLASKPGG  246 (296)
T ss_pred             CChhhhhHHHHHcCCCCcEEEEEccCCCC
Confidence            986544 5677899999999999876655

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.46  E-value=7.4e-06  Score=71.42  Aligned_cols=169  Identities=19%  Similarity=0.259  Sum_probs=98.8

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .+.++++++||.+|+ |. |..+.++++..|.  +|++++.+++..+.+++.    +.+.+ .....+    ..++.  .
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d----~~~l~--~  142 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGE----IEALP--V  142 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcc----hhhCC--C
Confidence            456889999999998 55 8888888887765  699999999988888653    33221 111111    11110  1


Q ss_pred             cCCCccEEEeCCC-------hhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          215 KLKGVDVLYDPVG-------GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       215 ~~~~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      ....||+|+.+..       ...+..+.+.|+|+|+++..+......  .+  ..+.+...+.+......         .
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~---------~  209 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA---------L  209 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC---------C
Confidence            2347999985431       146788999999999999977654321  11  11112221111111110         1


Q ss_pred             HHHHHHHHHHC-Cc--eeEeeeeeechhhHHHHHHHH--HcCCcceeEE
Q 019196          288 SLRELLLWAAK-GL--ITIHISHTYSPSEANLAFSAI--EDRKVIGKVM  331 (344)
Q Consensus       288 ~~~~~~~~l~~-g~--i~~~~~~~~~l~~~~ea~~~~--~~~~~~gkvv  331 (344)
                      ...++.+++++ |-  +.......+++++..++++.+  ..+...++.+
T Consensus       210 ~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        210 QEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             CHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence            12334455554 32  223455678899999999888  5544444444

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.40  E-value=5.2e-06  Score=75.74  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=78.8

Q ss_pred             HHHHHHHhcCCC-CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019196          134 SHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       134 a~~~l~~~~~~~-~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .|+++.+..++. .+++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+         ..+.. 
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~---------l~eal-  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT---------MEEAA-  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC---------HHHHH-
Confidence            455654443544 8999999999 9999999999999999999999988877666666754 221         12221 


Q ss_pred             HhcCCCccEEEeCCChh-hHH-HHHhcccCCCEEEEEeccCC
Q 019196          213 ARKLKGVDVLYDPVGGK-LTK-ESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~~  252 (344)
                          .++|++|+|+|.. .+. ..+..+++++.++.+|....
T Consensus       266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence                3689999999874 454 68899999999999986654

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.23  E-value=2.1e-05  Score=71.42  Aligned_cols=102  Identities=21%  Similarity=0.240  Sum_probs=76.8

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019196          134 SHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       134 a~~~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      ++.++.+..+ ...+++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+         .++.. 
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~---------leeal-  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT---------MEEAA-  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC---------HHHHH-
Confidence            3444444433 367999999999 9999999999999999999999888877777777763 221         11211 


Q ss_pred             HhcCCCccEEEeCCChhh-HH-HHHhcccCCCEEEEEeccC
Q 019196          213 ARKLKGVDVLYDPVGGKL-TK-ESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  251 (344)
                          .+.|++|+++|... +. ..+..+++++.++.+|...
T Consensus       249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence                35799999998754 44 4889999999999988654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.20  E-value=2.4e-05  Score=71.71  Aligned_cols=101  Identities=18%  Similarity=0.253  Sum_probs=78.3

Q ss_pred             HHHHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          135 HVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       135 ~~~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++..++.+...+...|+..+      +    ..+..  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~----leEal--  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------T----LEDVV--  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------c----HHHHH--
Confidence            4455454443 56899999999 999999999999999999999998877667777776522      1    22222  


Q ss_pred             hcCCCccEEEeCCChhh--HHHHHhcccCCCEEEEEeccC
Q 019196          214 RKLKGVDVLYDPVGGKL--TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       214 ~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~  251 (344)
                         ...|++++|+|...  ....+..|++++.++.+|...
T Consensus       308 ---~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        308 ---SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ---hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence               25799999999753  377999999999999999743

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.19  E-value=6.2e-05  Score=68.29  Aligned_cols=98  Identities=22%  Similarity=0.304  Sum_probs=70.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +.+|+|+|+ |.+|+.+++.++.+|++|++++++.++.+.+. .++........+      .+.+.+..  ..+|++|+|
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l--~~aDvVI~a  237 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAV--KRADLLIGA  237 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHH--ccCCEEEEc
Confidence            456999999 99999999999999999999999988877765 455432222221      12222222  368999999


Q ss_pred             CC---h--h--hHHHHHhcccCCCEEEEEeccCCC
Q 019196          226 VG---G--K--LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       226 ~g---~--~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      ++   .  +  .....+..+++++.++.++...+.
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence            83   2  2  236788889999999999976543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.12  E-value=8.2e-05  Score=65.00  Aligned_cols=95  Identities=18%  Similarity=0.295  Sum_probs=71.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++++|+|. |.+|..++..++.+|++|++..++.++.+.+.+.|...+ .         ..++.+..  ..+|+||+|
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~---------~~~l~~~l--~~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P---------LNKLEEKV--AEIDIVINT  216 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c---------HHHHHHHh--ccCCEEEEC
Confidence            4789999999 999999999999999999999999887777776664322 1         11111222  368999999


Q ss_pred             CChhhH-HHHHhcccCCCEEEEEeccCCC
Q 019196          226 VGGKLT-KESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       226 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      ++...+ ...+..++++..++.++...+.
T Consensus       217 ~P~~ii~~~~l~~~k~~aliIDlas~Pg~  245 (287)
T TIGR02853       217 IPALVLTADVLSKLPKHAVIIDLASKPGG  245 (287)
T ss_pred             CChHHhCHHHHhcCCCCeEEEEeCcCCCC
Confidence            986544 4577889998888888765544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.06  E-value=5e-05  Score=64.69  Aligned_cols=81  Identities=30%  Similarity=0.422  Sum_probs=58.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC----Cc-EEE--eCCCCCchhhHHHHHHHhc-
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG----VD-HVV--DLSNESVIPSVKEFLKARK-  215 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~v~--~~~~~~~~~~~~~~~~~~~-  215 (344)
                      ..++++||+|||+|+|...+..+...|++++.+.|+.+|+..+. ++.    .. .++  |..+.+.   +..+..... 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~---~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEA---LERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhH---HHHHHHHHHh
Confidence            45679999999999999999999999999999999999987663 332    11 233  3333333   444443322 


Q ss_pred             -CCCccEEEeCCCh
Q 019196          216 -LKGVDVLYDPVGG  228 (344)
Q Consensus       216 -~~~~d~vid~~g~  228 (344)
                       +..+|+.+||+|-
T Consensus        81 ~~~~IdvLVNNAG~   94 (265)
T COG0300          81 RGGPIDVLVNNAGF   94 (265)
T ss_pred             cCCcccEEEECCCc
Confidence             3479999999984

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.05  E-value=0.0015  Score=56.99  Aligned_cols=232  Identities=13%  Similarity=0.083  Sum_probs=126.4

Q ss_pred             EEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc-------------------------cCCCCCC----CHHHHhhc
Q 019196           77 GTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-------------------------FPVPKGC----DLLAAAAL  127 (344)
Q Consensus        77 G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~-------------------------~~~P~~~----~~~~aa~l  127 (344)
                      ++|++  |.++.+.+|+||+|+.+-+   +++++.+                         .+++.+-    +.++.-++
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~a---shl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~~L  113 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMA---SHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQML  113 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeecccc---ceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHHHH
Confidence            66666  8999999999999986532   2222222                         1121111    22333333


Q ss_pred             cc-hHHHHHHHHHHhcC---CCCCCEEEEecCCChHHHHHHHHHH-Hc-CCeEEEEecCHHHHHHHHhcC-CcEEEeCCC
Q 019196          128 PV-AFGTSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGK-VC-GATIIAVARGAEKIKFLKSLG-VDHVVDLSN  200 (344)
Q Consensus       128 ~~-~~~ta~~~l~~~~~---~~~~~~vlI~g~~g~~G~~~~~~~~-~~-g~~v~~~~~~~~~~~~~~~~g-~~~v~~~~~  200 (344)
                      .- .+.|.| .|.+...   .-..+.|+|.+||+-+++.++..++ .. +.+++.+++... ..+.+.+| .+.++.|++
T Consensus       114 lrPLf~Tsf-ll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve~lg~Yd~V~~Yd~  191 (314)
T PF11017_consen  114 LRPLFITSF-LLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVESLGCYDEVLTYDD  191 (314)
T ss_pred             HHHHHHHHH-HHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhhccCCceEEeehhh
Confidence            23 344555 3433332   2234689999999999999999998 33 458888886544 56888888 678888765


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCC-EEEEEeccCCCCCCcchhhhh-ccceEEEEEEec--
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGA-QILVIGFASGEIPVIPANIAL-VKNWTVHGLYWG--  275 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~--  275 (344)
                      .+.      +    ....--+++|+.|...+ ..+...++..= ..+.+|....+.. .....+. .+-..+.....-  
T Consensus       192 i~~------l----~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~-~~~~~l~g~~~~~FFAp~~~~k  260 (314)
T PF11017_consen  192 IDS------L----DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKV-EAPADLPGPRPEFFFAPDQIDK  260 (314)
T ss_pred             hhh------c----cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCcccc-CccccCCCCCcEEEeChHHHHH
Confidence            432      1    12345788999997543 34444444432 4566665432211 1000100 111111111100  


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCcee-EeeeeeechhhHHHHHHHHHcCCc
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLIT-IHISHTYSPSEANLAFSAIEDRKV  326 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~-~~~~~~~~l~~~~ea~~~~~~~~~  326 (344)
                      ....-.++...+.+.+.+......... ..+...-..+.+.++++.+.+++.
T Consensus       261 r~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  261 RIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence            000011222334444444333333333 346677899999999999988764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.05  E-value=9.9e-05  Score=67.95  Aligned_cols=100  Identities=18%  Similarity=0.268  Sum_probs=74.3

Q ss_pred             HHHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          136 VALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       136 ~~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+..+      +    ..++.   
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~----leell---  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------T----LEDVV---  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------c----HHHHH---
Confidence            44434333 347899999999 999999999999999999999888776555555565321      1    22222   


Q ss_pred             cCCCccEEEeCCChh-hH-HHHHhcccCCCEEEEEeccC
Q 019196          215 KLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       215 ~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~  251 (344)
                        ...|+|+.|+|.. .+ ...+..|++++.++.+|...
T Consensus       308 --~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        308 --ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             --hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence              3689999999874 44 47999999999999998653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.04  E-value=3.3e-05  Score=64.14  Aligned_cols=80  Identities=26%  Similarity=0.493  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCC----cEEEeCCCCCchhhHHHHHHH-h-cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV----DHVVDLSNESVIPSVKEFLKA-R-KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~----~~v~~~~~~~~~~~~~~~~~~-~-~~~~  218 (344)
                      .++.++|+|+++|+|.+.++.+...|++|+.+.|+.++++.+. +++.    ...+|..+...   .+..... . ....
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~---~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAA---VEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHH---HHHHHHHHHHhhCc
Confidence            3578999999999999999999999999999999999998774 6772    22334444322   2333322 1 2346


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++|++|.
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999999984

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.01  E-value=1.9e-05  Score=76.06  Aligned_cols=119  Identities=17%  Similarity=0.220  Sum_probs=76.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC---------------------HHHHHHHHhcCCcEEEeCCC-
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---------------------AEKIKFLKSLGVDHVVDLSN-  200 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~---------------------~~~~~~~~~~g~~~v~~~~~-  200 (344)
                      ...++++|+|+|+ |+.|+++++.++..|++|++++..                     ..+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3567899999999 999999999999999999998842                     34567788899877666433 


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEE
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG  271 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (344)
                      .+..  ....     ..++|++|+++|.. .....+......|.+..++...... ... .....+++.+.|
T Consensus       212 ~~~~--~~~~-----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~-~~~-~~~~gk~v~ViG  274 (564)
T PRK12771        212 EDIT--LEQL-----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVG-EGE-PPFLGKRVVVIG  274 (564)
T ss_pred             CcCC--HHHH-----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhh-ccC-CcCCCCCEEEEC
Confidence            2210  1111     13699999999974 3333444555666665554322110 011 223456666666

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.01  E-value=7.1e-05  Score=61.00  Aligned_cols=116  Identities=16%  Similarity=0.247  Sum_probs=82.4

Q ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHH----HHhcCCcEEE
Q 019196          121 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF----LKSLGVDHVV  196 (344)
Q Consensus       121 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~g~~~v~  196 (344)
                      .....++..+...|.  +.+...++++++||-+|.  |.|+.++-+++..+ +|+.+.+.++=.+.    ++.+|...+.
T Consensus        49 i~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~  123 (209)
T COG2518          49 IGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVT  123 (209)
T ss_pred             CCCCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceE
Confidence            334455555666665  247889999999999995  77999999999877 99999998773333    4567874333


Q ss_pred             -eCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEEec
Q 019196          197 -DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       197 -~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  249 (344)
                       ...+...        .+.....||.|+-+.+.+.. ...++.|+++|+++..-.
T Consensus       124 v~~gDG~~--------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         124 VRHGDGSK--------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             EEECCccc--------CCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence             2222211        11123579999988887766 667899999999988644

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.00  E-value=5.3e-05  Score=60.90  Aligned_cols=79  Identities=24%  Similarity=0.381  Sum_probs=59.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC---CcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      |.+|||.||++|+|+..++-...+|-+|+++.++.++++.++...   ...+.|..+.+-   .+++..+.  .....++
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~---~~~lvewLkk~~P~lNv   81 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDS---RRELVEWLKKEYPNLNV   81 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhh---HHHHHHHHHhhCCchhe
Confidence            678999999999999999999999999999999999999997643   234555555443   33333322  1235899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      ++||+|-
T Consensus        82 liNNAGI   88 (245)
T COG3967          82 LINNAGI   88 (245)
T ss_pred             eeecccc
Confidence            9999984

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.93  E-value=7e-05  Score=60.50  Aligned_cols=107  Identities=23%  Similarity=0.311  Sum_probs=73.4

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc-EEEeCCCCCc-hhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAA-GGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESV-IPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~-~~~~~~~~~~~~~~~~d~  221 (344)
                      ..+.|||+|++ |++|.+++.-....|+.|+++.++-++...+. ++|.. .-+|..+++- .....+++.. ..++.|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence            35679999885 99999999888899999999999999887775 67732 2234333332 2223333333 4567999


Q ss_pred             EEeCCChhh--------------------------HHH-HHhcccCCCEEEEEeccCCC
Q 019196          222 LYDPVGGKL--------------------------TKE-SLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       222 vid~~g~~~--------------------------~~~-~~~~l~~~G~~v~~g~~~~~  253 (344)
                      .+|++|.+.                          +++ ..-..+..|++|.+|...+.
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~  143 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV  143 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence            999888521                          111 22466788999999876544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.93  E-value=0.00027  Score=60.14  Aligned_cols=105  Identities=28%  Similarity=0.396  Sum_probs=69.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc---CCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL---GVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+ +++   +....+..+-.+. +..+++.+..  ...++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST-ESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            367999999999999999999999999999999998877655 222   2222332222221 2233333222  12468


Q ss_pred             cEEEeCCChh------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          220 DVLYDPVGGK------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      |.++.+.+..                        .++..+.+++++|+++.++...
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            9999988731                        1344556677789999988654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.89  E-value=0.00012  Score=65.06  Aligned_cols=105  Identities=25%  Similarity=0.285  Sum_probs=75.7

Q ss_pred             cCCCCCCCHHHHhhccchHHHHHHHHHHhcCC---CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHH-HHH
Q 019196          113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL---SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI-KFL  187 (344)
Q Consensus       113 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~-~~~  187 (344)
                      ++.|+.+..+.++.. .+.+.++.++......   -++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++. +++
T Consensus       142 ~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la  219 (311)
T cd05213         142 IKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELA  219 (311)
T ss_pred             HHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            888999988888765 4777787776433222   36889999999 9999999999998776 788999988865 566


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH
Q 019196          188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  231 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (344)
                      +++|.. +.+.+  +    ..+.   .  ..+|+||.|++.+..
T Consensus       220 ~~~g~~-~~~~~--~----~~~~---l--~~aDvVi~at~~~~~  251 (311)
T cd05213         220 KELGGN-AVPLD--E----LLEL---L--NEADVVISATGAPHY  251 (311)
T ss_pred             HHcCCe-EEeHH--H----HHHH---H--hcCCEEEECCCCCch
Confidence            778863 33221  1    1121   1  358999999997544

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08324 short chain dehydrogenase; Validated

Probab=97.86  E-value=0.00018  Score=71.01  Aligned_cols=103  Identities=26%  Similarity=0.424  Sum_probs=68.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCC--c-EE--EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV--D-HV--VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~v--~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++.  . ..  .|..+.+.   +.+.....  ..+
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~---v~~~~~~~~~~~g  497 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAA---VQAAFEEAALAFG  497 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHH---HHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999988765543 3432  1 12  23333221   33322221  124


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccC---CCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNW---GAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~---~G~~v~~g~~~  251 (344)
                      ++|++|+|+|..                          .++.++..+++   +|+++.++...
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence            799999999821                          12334555555   68999988654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.84  E-value=0.00036  Score=60.06  Aligned_cols=109  Identities=34%  Similarity=0.495  Sum_probs=72.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHH--hcC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKA--RKL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~--~~~  216 (344)
                      .++.|+|+|||+|+|..++.-+-..|++++.+.+..++++..    ++.+... ++  ..+-.+. ++.+.....  ...
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~-~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDE-ESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCH-HHHHHHHHHHHHhc
Confidence            478899999999999999988888999988888887776655    3444332 22  1221111 222322221  134


Q ss_pred             CCccEEEeCCChh--------------------------hHHHHHhcccCC--CEEEEEeccCCCCC
Q 019196          217 KGVDVLYDPVGGK--------------------------LTKESLKLLNWG--AQILVIGFASGEIP  255 (344)
Q Consensus       217 ~~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~  255 (344)
                      +++|+.+|++|-.                          ....++..|++.  |+++.++...+...
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~  156 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP  156 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC
Confidence            6899999998841                          124566666665  99999998776543

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00017  Score=63.04  Aligned_cols=79  Identities=16%  Similarity=0.315  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh---cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR---KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~---~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+...+...+ .|..+.+.   +++..+..   .+..+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPES---IAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHH---HHHHHHHHHHHcCCCccE
Confidence            35789999999999999999998899999999999888777766554322 23333222   22322221   2346999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        80 li~~Ag   85 (277)
T PRK05993         80 LFNNGA   85 (277)
T ss_pred             EEECCC
Confidence            999986

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.0016  Score=56.17  Aligned_cols=80  Identities=33%  Similarity=0.460  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHH----HHhcCCcEE-E--eCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKF----LKSLGVDHV-V--DLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~----~~~~g~~~v-~--~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .+++++|.|++|++|..+++.+...|++ |++++++.++...    ++..+.... +  |..+.   +.+.+..+..  .
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~   81 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV---EDCRRVVAAADEA   81 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH---HHHHHHHHHHHHH
Confidence            4678999999999999999999999998 9999988665442    233343321 2  33222   2233333221  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|.+|+|.+.
T Consensus        82 ~g~id~li~~ag~   94 (260)
T PRK06198         82 FGRLDALVNAAGL   94 (260)
T ss_pred             hCCCCEEEECCCc
Confidence            1369999999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.78  E-value=7.6e-05  Score=57.55  Aligned_cols=92  Identities=25%  Similarity=0.348  Sum_probs=60.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHH-HhcCCc--EEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFL-KSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+++++|+|+ |++|.+++..+...|++ |+++.|+.+|.+.+ +.++..  ....+++.      .+..     ..+|+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~------~~~~-----~~~Di   78 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL------EEAL-----QEADI   78 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH------CHHH-----HTESE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH------HHHH-----hhCCe
Confidence            5789999999 99999999999999995 99999999887765 455322  23333321      1111     36999


Q ss_pred             EEeCCChhhH---HHHHhcccC-CCEEEEEec
Q 019196          222 LYDPVGGKLT---KESLKLLNW-GAQILVIGF  249 (344)
Q Consensus       222 vid~~g~~~~---~~~~~~l~~-~G~~v~~g~  249 (344)
                      ||+|++....   ...+....+ -+.+++++.
T Consensus        79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   79 VINATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             EEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            9999987532   333333322 256777654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.70  E-value=0.00058  Score=59.45  Aligned_cols=80  Identities=31%  Similarity=0.430  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+...+... ..|..+.+.   +.+..+..  ...++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEAS---IKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEE
Confidence            3578999999999999999999889999999999988776655444332 223333222   22222211  23479999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999873

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00029  Score=61.42  Aligned_cols=77  Identities=29%  Similarity=0.470  Sum_probs=55.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~vid  224 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+...+...+ .|..+.+.   +.+..+..  ...++|++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAA---LARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEEEE
Confidence            479999999999999999998899999999998887776665554322 34433222   33333222  2346999999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        79 ~ag   81 (274)
T PRK05693         79 NAG   81 (274)
T ss_pred             CCC
Confidence            998

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.66  E-value=0.00085  Score=54.56  Aligned_cols=93  Identities=24%  Similarity=0.269  Sum_probs=65.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-  228 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-  228 (344)
                      |+|+||+|.+|..+++.+...|.+|+++++++++.+.  ..+. +++..+-.+.    ..+.+..  .++|.||.+.|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d~----~~~~~al--~~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGV-EIIQGDLFDP----DSVKAAL--KGADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTE-EEEESCTTCH----HHHHHHH--TTSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--cccc-ccceeeehhh----hhhhhhh--hhcchhhhhhhhh
Confidence            7999999999999999999999999999999987776  3333 3444443332    3344433  379999999983 


Q ss_pred             ----hhHHHHHhcccCCC--EEEEEeccC
Q 019196          229 ----KLTKESLKLLNWGA--QILVIGFAS  251 (344)
Q Consensus       229 ----~~~~~~~~~l~~~G--~~v~~g~~~  251 (344)
                          +.....++.++..|  +++.++...
T Consensus        72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccccccccceeeeccc
Confidence                33455555555544  777777554

...

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.00077  Score=58.30  Aligned_cols=105  Identities=21%  Similarity=0.231  Sum_probs=66.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..++..+...|++|++++++.++.+.+ ++++... .+..+-.+ .+.+.++....  ....+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            467999999999999999999988999999999988765544 4444321 22222211 12233332221  1246899


Q ss_pred             EEeCCChh-------------------------hHHHHHhcc-cCCCEEEEEeccC
Q 019196          222 LYDPVGGK-------------------------LTKESLKLL-NWGAQILVIGFAS  251 (344)
Q Consensus       222 vid~~g~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~  251 (344)
                      ++++.|..                         ..+.++..+ +++|+++.++...
T Consensus        84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~  139 (261)
T PRK08265         84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS  139 (261)
T ss_pred             EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            99998731                         112233344 6678999887654

>PRK12742 oxidoreductase; Provisional

Probab=97.66  E-value=0.0011  Score=56.40  Aligned_cols=103  Identities=23%  Similarity=0.350  Sum_probs=65.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|+++.+ +.++.+.+ ++++... +..+-.+. +.+.+....  ..++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~~~-~~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA-VQTDSADR-DAVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeE-EecCCCCH-HHHHHHHHH--hCCCcEEE
Confidence            3679999999999999999999999999887765 44444433 4455432 22222221 123333332  24699999


Q ss_pred             eCCChh----h----------------------HHHHHhcccCCCEEEEEeccCC
Q 019196          224 DPVGGK----L----------------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       224 d~~g~~----~----------------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++|..    .                      ...++..++..|+++.++....
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            998741    0                      0233345667899999876543

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.65  E-value=0.00081  Score=60.47  Aligned_cols=80  Identities=25%  Similarity=0.387  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+    ++.|....   .|..+.+   .+++..+..  ..
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~---~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE---AVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH---HHHHHHHHHHHHC
Confidence            467899999999999999999988999999999988765543    23454322   2333322   233332221  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|+++|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.63  E-value=0.00042  Score=62.15  Aligned_cols=80  Identities=26%  Similarity=0.429  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+    ++.|.+..   .|..+.+.   ++++....  ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQ---VKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHH---HHHHHHHHHHhc
Confidence            467999999999999999999999999999999998876544    33454432   23333222   33332221  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|+|+|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            469999999983

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.62  E-value=0.0014  Score=56.29  Aligned_cols=136  Identities=21%  Similarity=0.320  Sum_probs=84.0

Q ss_pred             CCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHH
Q 019196           89 FKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQ  165 (344)
Q Consensus        89 ~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~  165 (344)
                      +++||+++...   +|.++.. +.   +.+++++++..+. -+.. ......+.  ....++.+||-+|+ |. |.+++.
T Consensus        67 ~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt-~~~l~~l~--~~~~~~~~VLDiGc-Gs-G~l~i~  136 (250)
T PRK00517         67 IRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTT-RLCLEALE--KLVLPGKTVLDVGC-GS-GILAIA  136 (250)
T ss_pred             EEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHH-HHHHHHHH--hhcCCCCEEEEeCC-cH-HHHHHH
Confidence            67788776543   4555533 33   7778888777654 1111 11122221  12567889999998 54 887776


Q ss_pred             HHHHcCC-eEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh----hHHHHHh
Q 019196          166 IGKVCGA-TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK----LTKESLK  236 (344)
Q Consensus       166 ~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~  236 (344)
                      +++ .|+ +|++++.++...+.+++.    +....+....              ....||+|+.+...+    .+..+.+
T Consensus       137 ~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~--------------~~~~fD~Vvani~~~~~~~l~~~~~~  201 (250)
T PRK00517        137 AAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ--------------GDLKADVIVANILANPLLELAPDLAR  201 (250)
T ss_pred             HHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc--------------CCCCcCEEEEcCcHHHHHHHHHHHHH
Confidence            555 566 599999999887777542    2211111100              011599999776543    4467889


Q ss_pred             cccCCCEEEEEec
Q 019196          237 LLNWGAQILVIGF  249 (344)
Q Consensus       237 ~l~~~G~~v~~g~  249 (344)
                      .|+++|.++..|.
T Consensus       202 ~LkpgG~lilsgi  214 (250)
T PRK00517        202 LLKPGGRLILSGI  214 (250)
T ss_pred             hcCCCcEEEEEEC
Confidence            9999999998764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.60  E-value=0.0066  Score=52.31  Aligned_cols=208  Identities=17%  Similarity=0.171  Sum_probs=121.9

Q ss_pred             CCCeEEEEEEEeecC-hhhHHHHHhcCCCCCCCCcccC-cceeEEEEEe-CCCCCCCCCCCEEEEecCCC---ceeeEEe
Q 019196           36 SSTAVRVRVKATSLN-YANYLQILGKYQEKPPLPFVPG-SDYSGTVDAV-GPNVSNFKVGDTVCGFAALG---SFAQFIV  109 (344)
Q Consensus        36 ~~~eV~I~v~~~~i~-~~D~~~~~g~~~~~~~~p~~~G-~e~~G~V~~~-g~~~~~~~~Gd~V~~~~~~g---~~~~~~~  109 (344)
                      ..+||+|+-.+..-. .+|.......-..-.+---+.+ .|.+=.|.+- .++.+-|+.|+..+++.+-.   ..++.+.
T Consensus        29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l~  108 (371)
T COG0686          29 HGHEVLVETGAGAGSGFDDDDYEAAGAKIVATAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEALL  108 (371)
T ss_pred             CCcEEEEecCCcCCCCCChHHHHHcCCEEecCHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHHH
Confidence            346899988765443 3444433222111001111233 5666666663 33456699999999875421   0001000


Q ss_pred             -------ecc-cCCCC-----CCCHHHHhhccchHHHHHHHHHHhcC----------CCCCCEEEEecCCChHHHHHHHH
Q 019196          110 -------ADQ-FPVPK-----GCDLLAAAALPVAFGTSHVALVHRAQ----------LSSGQVLLVLGAAGGVGVAAVQI  166 (344)
Q Consensus       110 -------~~~-~~~P~-----~~~~~~aa~l~~~~~ta~~~l~~~~~----------~~~~~~vlI~g~~g~~G~~~~~~  166 (344)
                             .-+ +..|+     --++.+.|.-...-..|++.......          +. ..+|.|+|+ |-+|.-++.+
T Consensus       109 ~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~-~~kv~iiGG-GvvgtnaAki  186 (371)
T COG0686         109 KSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVL-PAKVVVLGG-GVVGTNAAKI  186 (371)
T ss_pred             HcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCC-CccEEEECC-ccccchHHHH
Confidence                   001 33344     33455555543444555553222111          22 346888899 9999999999


Q ss_pred             HHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC--h---h--hHHHHHhcc
Q 019196          167 GKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--G---K--LTKESLKLL  238 (344)
Q Consensus       167 ~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~---~--~~~~~~~~l  238 (344)
                      |-.+|++|+..+.+.+|++.+.. ++.....-+++.      ..+.+..  .+.|++|.++=  +   +  ..++.++.|
T Consensus       187 A~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~------~~iee~v--~~aDlvIgaVLIpgakaPkLvt~e~vk~M  258 (371)
T COG0686         187 AIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP------SNIEEAV--KKADLVIGAVLIPGAKAPKLVTREMVKQM  258 (371)
T ss_pred             HhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH------HHHHHHh--hhccEEEEEEEecCCCCceehhHHHHHhc
Confidence            99999999999999999998875 444322223332      2222222  46899998752  2   2  347789999


Q ss_pred             cCCCEEEEEeccCCC
Q 019196          239 NWGAQILVIGFASGE  253 (344)
Q Consensus       239 ~~~G~~v~~g~~~~~  253 (344)
                      +|++.++++....+.
T Consensus       259 kpGsVivDVAiDqGG  273 (371)
T COG0686         259 KPGSVIVDVAIDQGG  273 (371)
T ss_pred             CCCcEEEEEEEcCCC
Confidence            999999999876543

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0022  Score=54.86  Aligned_cols=103  Identities=21%  Similarity=0.358  Sum_probs=62.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|+++.++.+ +.+.+    +..+.. ..+..+-.+. +.+..+.+..  ...
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   83 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE-ESVAALMDTAREEFG   83 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhCC
Confidence            3578999999999999999998889999998887643 22222    222322 1222222211 1122222211  124


Q ss_pred             CccEEEeCCChh--------------------hHHHHHhcccCCCEEEEEec
Q 019196          218 GVDVLYDPVGGK--------------------LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ++|+++.+.+..                    .++.+...+...|+++.++.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            689999887631                    22445556666788888865

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00066  Score=59.92  Aligned_cols=80  Identities=24%  Similarity=0.385  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC--cEE---EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHV---VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.  ...   .|..+.+   .+.+..+..  ...
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~---~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA---AMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH---HHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999988876654 44542  111   2333322   122322211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0017  Score=55.50  Aligned_cols=82  Identities=29%  Similarity=0.320  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|+|++|++|..++..+...|++|+++++++++.+...    ..+... ++..+-.+ .+.+.++....  ...+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999889999999998877655432    223222 22222221 12233333221  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|+|+|.
T Consensus        85 id~vi~~ag~   94 (250)
T PRK12939         85 LDGLVNNAGI   94 (250)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.00086  Score=56.57  Aligned_cols=80  Identities=24%  Similarity=0.312  Sum_probs=55.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ++++|+|++|++|...+..+...|++|+++++++++.+.+++++....+..+-. ..+.++++.+.....++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMN-DPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCC-CHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            479999999999999999888899999999998876666655542223222211 1222445555444457999999876


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.52  E-value=0.0026  Score=49.88  Aligned_cols=93  Identities=19%  Similarity=0.250  Sum_probs=63.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .-.+++++|.|- |.+|.-.++.++.+|++|++++.++-+.-.+..-|+... .         .++.   .  ...|+++
T Consensus        20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~---------~~~a---~--~~adi~v   83 (162)
T PF00670_consen   20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-T---------LEEA---L--RDADIFV   83 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-----------HHHH---T--TT-SEEE
T ss_pred             eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-C---------HHHH---H--hhCCEEE
Confidence            347899999999 999999999999999999999999987777766776432 1         2222   1  3589999


Q ss_pred             eCCChhh--HHHHHhcccCCCEEEEEeccCC
Q 019196          224 DPVGGKL--TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       224 d~~g~~~--~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      .++|...  -.+-+..|+++..+..+|....
T Consensus        84 taTG~~~vi~~e~~~~mkdgail~n~Gh~d~  114 (162)
T PF00670_consen   84 TATGNKDVITGEHFRQMKDGAILANAGHFDV  114 (162)
T ss_dssp             E-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred             ECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence            9999754  3567888998877777765443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06128 oxidoreductase; Provisional

Probab=97.47  E-value=0.0025  Score=56.33  Aligned_cols=105  Identities=24%  Similarity=0.310  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--H----HHHHhcCCcEE-EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--I----KFLKSLGVDHV-VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~----~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..++..+...|++|+++.++.+.  .    +.++..+.... +..+-.+. +.++++....  ..
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHHh
Confidence            46789999999999999999998899999887654321  1    22233443322 22222111 1223322211  12


Q ss_pred             CCccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          217 KGVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       217 ~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .++|++|+++|..                           ..+.++..++++|+++.++...
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~  194 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ  194 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence            4699999998731                           1133455667788999887554

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.46  E-value=0.0017  Score=52.62  Aligned_cols=120  Identities=21%  Similarity=0.234  Sum_probs=81.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++.+|++|++.+++..........+..    +.  +    ++++..     ..|+|+.+
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~----l~ell~-----~aDiv~~~   98 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--S----LDELLA-----QADIVSLH   98 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--S----HHHHHH-----H-SEEEE-
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--e----hhhhcc-----hhhhhhhh
Confidence            5889999999 9999999999999999999999988755545555531    11  1    344432     47999998


Q ss_pred             CCh-----hhH-HHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCC
Q 019196          226 VGG-----KLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG  299 (344)
Q Consensus       226 ~g~-----~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  299 (344)
                      ++.     ..+ ...+..|+++..+|.++...                         .         -+.+.+.+.+++|
T Consensus        99 ~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~-------------------------~---------vde~aL~~aL~~g  144 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPGAVLVNVARGE-------------------------L---------VDEDALLDALESG  144 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGG-------------------------G---------B-HHHHHHHHHTT
T ss_pred             hccccccceeeeeeeeeccccceEEEeccchh-------------------------h---------hhhhHHHHHHhhc
Confidence            874     122 67889999999888764211                         0         1245778888999


Q ss_pred             ceeEeeeeeechhhHH
Q 019196          300 LITIHISHTYSPSEAN  315 (344)
Q Consensus       300 ~i~~~~~~~~~l~~~~  315 (344)
                      ++.-...++|.-|-.+
T Consensus       145 ~i~ga~lDV~~~EP~~  160 (178)
T PF02826_consen  145 KIAGAALDVFEPEPLP  160 (178)
T ss_dssp             SEEEEEESS-SSSSSS
T ss_pred             cCceEEEECCCCCCCC
Confidence            9986555566554433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08017 oxidoreductase; Provisional

Probab=97.44  E-value=0.0012  Score=56.71  Aligned_cols=80  Identities=21%  Similarity=0.351  Sum_probs=55.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCCCCc-hhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV-IPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+++.+...+ .|..+.+. .+..+.+.+. .+..+|.++++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIAL-TDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHh-cCCCCeEEEEC
Confidence            579999999999999999999899999999999888877777765432 23332211 1112222221 23468999988


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            763

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.43  E-value=0.0012  Score=61.20  Aligned_cols=141  Identities=21%  Similarity=0.266  Sum_probs=92.4

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCE-EEEecC----------------CCceeeEEeecccCCCCCCCHHHHhhccchHH
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDT-VCGFAA----------------LGSFAQFIVADQFPVPKGCDLLAAAALPVAFG  132 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~-V~~~~~----------------~g~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  132 (344)
                      .-|+|+++-+.+|+++....-.|+. ++|...                ++.|++.     ++.|..+..+.+. ...+.+
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a-----~~~~k~v~~~t~i-~~~~~S  164 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA-----FSVAKRVRTETGI-GAGAVS  164 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH-----HHHHhhHhhhcCC-CCCCcC
Confidence            4699999999999999876666664 332211                1222222     4455555443332 334667


Q ss_pred             HHHHHHHHhcC---CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHH-HHHhcCCcEEEeCCCCCchhhH
Q 019196          133 TSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       133 ta~~~l~~~~~---~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      +++.++.....   -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+ +++++|.+ +.+.         
T Consensus       165 v~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---------  233 (423)
T PRK00045        165 VASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---------  233 (423)
T ss_pred             HHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---------
Confidence            77777643322   146789999999 9999999999999998 8999999988755 66777753 3322         


Q ss_pred             HHHHHHhcCCCccEEEeCCChh
Q 019196          208 KEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~  229 (344)
                      .+.....  .++|+||+|++.+
T Consensus       234 ~~~~~~l--~~aDvVI~aT~s~  253 (423)
T PRK00045        234 DELPEAL--AEADIVISSTGAP  253 (423)
T ss_pred             HHHHHHh--ccCCEEEECCCCC
Confidence            1111111  3689999999863

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0018  Score=56.14  Aligned_cols=80  Identities=23%  Similarity=0.459  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCc-EEE--eCCCCCchhhHHHHHHHh-cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVV--DLSNESVIPSVKEFLKAR-KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~v~--~~~~~~~~~~~~~~~~~~-~~  216 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. ++    +.+ ..+  |..+.+.   ++.+.+.. ..
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~---i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRED---LERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHH---HHHHHHHHHhh
Confidence            4678999999999999999999999999999999877655442 22    322 222  3333222   23332221 23


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++++++|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            469999999874

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0014  Score=57.68  Aligned_cols=81  Identities=30%  Similarity=0.455  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++++|+|++|++|..+++.+...|++|++++++.++.+.+.    +.+.. ..+..+-.+. +.+.++.+..  ...++
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL-DAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCC
Confidence            578999999999999999999888999999999987665442    22322 1222221111 1233333321  12479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++|+|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.41  E-value=0.0017  Score=55.59  Aligned_cols=81  Identities=19%  Similarity=0.243  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..+... .+..+-.+ .+.+++..+..  ...+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            467899999999999999999998999999999987765443    2234332 22222111 12233333322  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|.+|+++|
T Consensus        83 id~vi~~ag   91 (253)
T PRK08217         83 LNGLINNAG   91 (253)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.39  E-value=0.0044  Score=53.51  Aligned_cols=105  Identities=14%  Similarity=0.179  Sum_probs=65.3

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHHHH---HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  +++|.++++.+...|++|+++.++.+..   +.+ ++++....+..+-.+. +.++++.+..  ..+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHcC
Confidence            46899999997  4999999999988999999988875432   222 3344323333322222 2233333222  124


Q ss_pred             CccEEEeCCChh---------------h---------------HHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK---------------L---------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .+|++++|+|..               .               .+.++..++.+|+++.++...
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~  151 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG  151 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            699999998631               0               134556677788988877544

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0018  Score=55.29  Aligned_cols=79  Identities=29%  Similarity=0.367  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. ..+.. .+..+-.+. ..+.+....  ..++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~-~~v~~~~~~--~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE-PLRLDVGDD-AAIRAALAA--AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCe-EEEecCCCH-HHHHHHHHH--hCCCCEEEE
Confidence            4678999999999999999999999999999999887665553 34433 222222221 123333332  246899999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            9873

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=97.39  E-value=0.0059  Score=52.40  Aligned_cols=153  Identities=23%  Similarity=0.268  Sum_probs=100.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-----------CCchhhHHHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-----------ESVIPSVKEFLKA  213 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-----------~~~~~~~~~~~~~  213 (344)
                      -++..+++.|. |..|+.++..++..|+-|+..+..+.+.+..+++|+......+.           +++.....++...
T Consensus       162 v~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            45668899999 99999999999999999999999999888888888654321111           1111111122111


Q ss_pred             hcCCCccEEEeCCC--h---h--hHHHHHhcccCCCEEEEEeccCCCCC--CcchhhhhccceEEEEEEe--ccccccCc
Q 019196          214 RKLKGVDVLYDPVG--G---K--LTKESLKLLNWGAQILVIGFASGEIP--VIPANIALVKNWTVHGLYW--GSYKIHRP  282 (344)
Q Consensus       214 ~~~~~~d~vid~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~  282 (344)
                       .-.++|+||.+.-  +   +  .......+|+||..++++....+..-  ..+......++.++.|..-  ++...+.+
T Consensus       241 -~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~aS  319 (356)
T COG3288         241 -QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQAS  319 (356)
T ss_pred             -HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhHH
Confidence             2357999998863  2   2  23678899999999999876544311  1333344677888887552  22333344


Q ss_pred             hhHHHHHHHHHHHHHCC
Q 019196          283 HVLEDSLRELLLWAAKG  299 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g  299 (344)
                      +.+...+-.+++++-+.
T Consensus       320 ~LYa~Nl~~~l~ll~~~  336 (356)
T COG3288         320 QLYATNLVNLLKLLCKK  336 (356)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            56667777777766543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.38  E-value=0.0016  Score=56.29  Aligned_cols=80  Identities=28%  Similarity=0.348  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CCc-EEE--eCCCCCc-hhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HVV--DLSNESV-IPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~~d  220 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+++. +.. ..+  |..+.+. .+..+++.+.  ...+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA--FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH--hCCCC
Confidence            468999999999999999999988999999999988776665442 321 122  2222211 1112222222  24689


Q ss_pred             EEEeCCC
Q 019196          221 VLYDPVG  227 (344)
Q Consensus       221 ~vid~~g  227 (344)
                      +++++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.38  E-value=0.0016  Score=59.49  Aligned_cols=112  Identities=19%  Similarity=0.200  Sum_probs=76.5

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +.......+..+.+...++++++||-+|+  |.|..+..+++..|++|++++.+++..+.+++......++....++   
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~---  222 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---  222 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch---
Confidence            33344455555667788899999999996  6788888899888999999999999888887643211122111122   


Q ss_pred             HHHHHHHhcCCCccEEEeC-----CCh----hhHHHHHhcccCCCEEEEEec
Q 019196          207 VKEFLKARKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                       ..+     ...||.|+..     ++.    ..++.+.+.|+|+|.++....
T Consensus       223 -~~l-----~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i  268 (383)
T PRK11705        223 -RDL-----NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI  268 (383)
T ss_pred             -hhc-----CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence             111     2469998643     332    345778899999999987543

>PRK06484 short chain dehydrogenase; Validated

Probab=97.38  E-value=0.003  Score=60.48  Aligned_cols=104  Identities=27%  Similarity=0.416  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcE-EE--eCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VV--DLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|+++++|...++.+...|++|++++++.++.+.+. +++... .+  |..+.+-   +.++.+..  ..+.+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAA---VESAFAQIQARWGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHH---HHHHHHHHHHHcCCC
Confidence            4679999999999999999999999999999999887776654 344322 12  3333222   33333221  12469


Q ss_pred             cEEEeCCChh------------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          220 DVLYDPVGGK------------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       220 d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      |++|+|+|..            .               .+.++..++.+|+++.++...+
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9999988731            0               2334456677899999886543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.37  E-value=0.0027  Score=60.19  Aligned_cols=48  Identities=25%  Similarity=0.273  Sum_probs=40.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      ...+.+.++++||+||+|++|..+++.+...|++|++++++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            344566889999999999999999999988999999999998876543

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.37  E-value=0.0042  Score=53.44  Aligned_cols=119  Identities=21%  Similarity=0.361  Sum_probs=81.0

Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD  193 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~  193 (344)
                      ++++++|.      ..++..+....+++||+++|=+|+  |.|.+++.+|+..|++|++++.|+++.+.+++    .|..
T Consensus        50 ~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~  121 (283)
T COG2230          50 DMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE  121 (283)
T ss_pred             CCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence            34555554      345556668899999999999996  78999999999999999999999998777743    4533


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCCccEEE-----eCCCh----hhHHHHHhcccCCCEEEEEeccCCC
Q 019196          194 HVVDLSNESVIPSVKEFLKARKLKGVDVLY-----DPVGG----KLTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       194 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      .-+...-.++    .++     ...||-|+     +-+|.    ..+..+.++|+++|+++........
T Consensus       122 ~~v~v~l~d~----rd~-----~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~  181 (283)
T COG2230         122 DNVEVRLQDY----RDF-----EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD  181 (283)
T ss_pred             cccEEEeccc----ccc-----ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence            1111111111    000     12377774     34443    2457788999999999987766544

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0019  Score=55.54  Aligned_cols=82  Identities=22%  Similarity=0.381  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..++..+...|++|+++++++++.+.+.    +.+.+. .+..+-.+. +..+++.+..  ...+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE-AYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHhcCC
Confidence            3578999999999999999999889999999999887665442    233222 222222221 1223222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.35  E-value=0.0017  Score=56.16  Aligned_cols=81  Identities=27%  Similarity=0.363  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+. +.+++..+..  ....+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSY-ADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999999999999999999887766554 33321 2222222221 1122222211  1246999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        84 li~~ag   89 (263)
T PRK06200         84 FVGNAG   89 (263)
T ss_pred             EEECCC
Confidence            999987

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0022  Score=55.23  Aligned_cols=84  Identities=20%  Similarity=0.215  Sum_probs=51.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHH-HHH----HHhcCC-c-EEEeCCCCCchhhHHHHH-HHh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEK-IKF----LKSLGV-D-HVVDLSNESVIPSVKEFL-KAR  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~-~~~----~~~~g~-~-~v~~~~~~~~~~~~~~~~-~~~  214 (344)
                      +..+++|||+|++|++|...++.+... |++|++++++.++ .+.    ++..+. + +.+..+-.+..+ ..+.. +..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS-HPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH-HHHHHHHHH
Confidence            456778999999999999999877666 4899999988764 332    233332 1 233332222211 12211 111


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                      ...++|+++++.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            22479999988764

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0019  Score=55.25  Aligned_cols=82  Identities=20%  Similarity=0.325  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      ++++++|+|++|++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+. +....+.+..  ...++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDV-AAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999999999999999999987665544 3455432 222222221 1122222211  1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|+++|.
T Consensus        84 vi~~ag~   90 (249)
T PRK06500         84 VFINAGV   90 (249)
T ss_pred             EEECCCC
Confidence            9999873

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0018  Score=54.46  Aligned_cols=78  Identities=26%  Similarity=0.360  Sum_probs=55.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ++++|+|++|++|..+++.+...|++|++++++.++.+.++..+.. ...|..+.+   .++.+.....+.++|+++.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPA---SVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHH---HHHHHHHHhcCCCCCEEEECC
Confidence            4699999999999999988878899999999988777666655533 222333332   244443333445799999987


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            64

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0025  Score=55.48  Aligned_cols=81  Identities=27%  Similarity=0.304  Sum_probs=53.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      ++++||+|++|++|..+++.+...|++|+++++++++.+.+ +.++....+..+-.+. +.+.+.....  ...++|+++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDP-ASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            56899999999999999998888899999999988876554 3444222222222221 1122222221  124699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      ++.|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            99873

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.31  E-value=0.0019  Score=57.68  Aligned_cols=81  Identities=30%  Similarity=0.357  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----C-Cc---EEEeCCCCCchhhHHHHHHHhcC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----G-VD---HVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g-~~---~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      .+++++|+||++++|...+..+...|++|+++++++++.+.+. ++    + ..   ...|..+ +..+..+++.+...+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhcC
Confidence            4789999999999999999888888999999999988766542 21    1 11   1234432 222334445544444


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      ..+|++++++|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence            45779999886

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.31  E-value=0.0051  Score=53.08  Aligned_cols=106  Identities=16%  Similarity=0.269  Sum_probs=64.0

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCH---HHHHHH-Hhc-CCc-EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFL-KSL-GVD-HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~-~~~-g~~-~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .+++++|+|++  +++|.++++.+...|++|+++.++.   ++.+.+ +++ +.. ..+..+-.+ .+.++++.+..  .
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHHh
Confidence            46889999996  7999999999888999999886542   333333 333 221 122222111 12233333322  1


Q ss_pred             CCCccEEEeCCChh---------------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          216 LKGVDVLYDPVGGK---------------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       216 ~~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      .+++|++++|+|..               .               .+..+..++++|+++.++...+
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  151 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG  151 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence            24699999987620               0               1234556677899998886544

>PRK06196 oxidoreductase; Provisional

Probab=97.30  E-value=0.0018  Score=57.67  Aligned_cols=81  Identities=25%  Similarity=0.352  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+ .++..-..+..+-.+. +.++++....  ...++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~-~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL-ESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH-HHHHHHHHHHHhcCCCCCEE
Confidence            467999999999999999998888999999999988766544 2332112222222222 2233333221  23479999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++++|
T Consensus       104 i~nAg  108 (315)
T PRK06196        104 INNAG  108 (315)
T ss_pred             EECCC
Confidence            99987

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0023  Score=54.09  Aligned_cols=81  Identities=20%  Similarity=0.179  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh---cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR---KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~---~~~  217 (344)
                      .+++++|.|+++++|...+..+...|++|+++.++.++.+.+    ++.+... .+..+..+. +.++++.+..   .+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQ-ESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            467899999999999999999988999999999988776544    2334322 222222222 2233333221   122


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|+++++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6999999986

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0022  Score=55.45  Aligned_cols=79  Identities=27%  Similarity=0.397  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVD-HVV--DLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. .   .+.. ..+  |..+.+.   +.+.....  ..
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEA---TAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH---HHHHHHHHHHHc
Confidence            4689999999999999999999889999999999887655442 2   2322 122  3333222   22222211  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++|+++|
T Consensus        86 ~~id~vi~~Ag   96 (263)
T PRK07814         86 GRLDIVVNNVG   96 (263)
T ss_pred             CCCCEEEECCC
Confidence            46999999987

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.29  E-value=0.0024  Score=55.28  Aligned_cols=80  Identities=29%  Similarity=0.486  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCcE--EE--eCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVDH--VV--DLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~~--v~--~~~~~~~~~~~~~~~~~~--  214 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. ++    +...  .+  |..+.   +.+.++.+..  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE---ADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCH---HHHHHHHHHHHH
Confidence            4678999999999999999999999999999999887655442 11    1111  12  33332   2233333221  


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                      ...++|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence            12469999999973

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0027  Score=54.67  Aligned_cols=80  Identities=23%  Similarity=0.357  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .+++|||+|++|++|..+++.+...|++|++++++..+.+.. ++++.. ...|..+.+.   +.++....  ...++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDA---VNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHH---HHHHHHHHHHHcCCCCE
Confidence            468999999999999999999988999999999987765544 344432 1223333222   33333221  1246899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998863

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0024  Score=54.88  Aligned_cols=82  Identities=23%  Similarity=0.263  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +   .+... .+..+-.+. +.+.++....  ...+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH-QQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999877655442 2   23221 222221111 1123322211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.|.
T Consensus        87 id~lv~~ag~   96 (253)
T PRK05867         87 IDIAVCNAGI   96 (253)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.002  Score=55.67  Aligned_cols=83  Identities=20%  Similarity=0.252  Sum_probs=53.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCc--EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD--HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~--~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      -+++++||+|++|++|..++..+...|++|+++.++.++.+.+.+ ....  ..+..+-.+. +.+.+.....  ...++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADP-AQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCH-HHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999899999999998776655433 2211  2222222211 1122222211  11469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+||.+.|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0057  Score=53.20  Aligned_cols=77  Identities=26%  Similarity=0.321  Sum_probs=50.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE----EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH----VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++|+|++|++|..+++.+...|++|+++.++.++.+.+    +..+...    ..|..+.+.   +.+.....  ...+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA---VAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH---HHHHHHHHHHhcCC
Confidence            689999999999999999988999999999887654433    2233321    233333222   22222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++++.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.26  E-value=0.0017  Score=56.22  Aligned_cols=80  Identities=28%  Similarity=0.458  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc----E--EEeCCCCCchhhHHHHHHHh-
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD----H--VVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~--v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      .++.+||+|++.++|.+.+..+...|++|+++.++.++.+..+    ..+..    .  +.|..+.+.   .+++...+ 
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~---~~~l~~~~~   83 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVD---VEKLVEFAV   83 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHH---HHHHHHHHH
Confidence            5788999999999999999999999999999999988765543    22221    1  222222222   23333222 


Q ss_pred             --cCCCccEEEeCCCh
Q 019196          215 --KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 --~~~~~d~vid~~g~  228 (344)
                        ..+++|+++|+.|.
T Consensus        84 ~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHhCCCCCEEEEcCCc
Confidence              23579999999884

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0029  Score=54.72  Aligned_cols=84  Identities=30%  Similarity=0.397  Sum_probs=54.2

Q ss_pred             CCCCCEEEEecCCC-hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-----cCCcEE--EeCCCCCchhhHHHHHHHh-
Q 019196          144 LSSGQVLLVLGAAG-GVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDHV--VDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g-~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~~~v--~~~~~~~~~~~~~~~~~~~-  214 (344)
                      +..++++||+|++| ++|.++++.+...|++|++++++.++.+...+     ++...+  +..+-.+ .+...++.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHHH
Confidence            34578999999986 89999999999999999999988776554421     343222  2222111 12233333221 


Q ss_pred             -cCCCccEEEeCCCh
Q 019196          215 -KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 -~~~~~d~vid~~g~  228 (344)
                       ..+++|++|+|.|.
T Consensus        93 ~~~g~id~li~~ag~  107 (262)
T PRK07831         93 ERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHcCCCCEEEECCCC
Confidence             12468999999983

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.24  E-value=0.0052  Score=57.74  Aligned_cols=79  Identities=24%  Similarity=0.394  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH--HHHHH-HHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKF-LKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~-~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.  ++.+. .++++... ..|..+.+.   .+.+....  ...++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDA---PARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999988743  33332 23455432 234433322   33333322  12369


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|+++|
T Consensus       286 d~vi~~AG  293 (450)
T PRK08261        286 DIVVHNAG  293 (450)
T ss_pred             CEEEECCC
Confidence            99999988

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.004  Score=53.83  Aligned_cols=82  Identities=28%  Similarity=0.388  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc--CC-cEEEeCCCCCchhhHHHHHHHh-cCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GV-DHVVDLSNESVIPSVKEFLKAR-KLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~-~~v~~~~~~~~~~~~~~~~~~~-~~~~~d  220 (344)
                      +++++||+|++|++|..++..+...|++|++++++.++.+.+. ++  +. ...+..+-.+. +....+.+.. ..+++|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSE-AGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHhcCCCC
Confidence            4678999999999999999998889999999999887665553 22  21 12222222221 1122222211 135789


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      .+++++|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0038  Score=53.70  Aligned_cols=82  Identities=30%  Similarity=0.454  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHH--hcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKA--RKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~--~~~~~  218 (344)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+..    .+. ..++..+-.+. +.+.+..+.  ....+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Confidence            46899999999999999999999899999999999887654432    121 12232222211 112222221  12246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.23  E-value=0.0088  Score=47.28  Aligned_cols=86  Identities=17%  Similarity=0.208  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|+|.|| |.+|..-++.+...|++|++++  ++..+.+++++.-..   ....+.        ...-.++|+|+-+
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~~---~~~~~~--------~~dl~~a~lViaa   77 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYITW---KQKTFS--------NDDIKDAHLIYAA   77 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcEE---EecccC--------hhcCCCceEEEEC
Confidence            4688999999 9999988888888899999885  333344444542111   111121        0122578999999


Q ss_pred             CChhhHHHHHhcccCCCEEE
Q 019196          226 VGGKLTKESLKLLNWGAQIL  245 (344)
Q Consensus       226 ~g~~~~~~~~~~l~~~G~~v  245 (344)
                      ++.+..+..+...++.+.++
T Consensus        78 T~d~e~N~~i~~~a~~~~~v   97 (157)
T PRK06719         78 TNQHAVNMMVKQAAHDFQWV   97 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCcE
Confidence            99876665554443333333

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.23  E-value=0.004  Score=54.18  Aligned_cols=91  Identities=20%  Similarity=0.270  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC---CcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG---VDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ...+++++|+|+ |++|.+++..+...|++|+++.++.++.+.+ ++++   ........         +.    ....+
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---------~~----~~~~~  179 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---------EL----PLHRV  179 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---------hh----cccCc
Confidence            345788999999 9999999988888899999999988776544 3332   11111111         10    11358


Q ss_pred             cEEEeCCChhhH---H---HHHhcccCCCEEEEEe
Q 019196          220 DVLYDPVGGKLT---K---ESLKLLNWGAQILVIG  248 (344)
Q Consensus       220 d~vid~~g~~~~---~---~~~~~l~~~G~~v~~g  248 (344)
                      |+|++|++..+.   .   .....++++..++++.
T Consensus       180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            999999986321   1   1234566776666664

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.23  E-value=0.0036  Score=53.57  Aligned_cols=82  Identities=23%  Similarity=0.352  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      .++++||+|++|++|..++..+...|++|++++++...  .+.+++.+.. ..+..+-.+ .+.+..+.+..  ...++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999998899999999886521  2233444432 222222221 12233332221  124699


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +++++.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99999873

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06720 hypothetical protein; Provisional

Probab=97.21  E-value=0.0064  Score=48.76  Aligned_cols=81  Identities=21%  Similarity=0.328  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hcCCcE-EEeCCCCCchhhHHHHHHH--hcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SLGVDH-VVDLSNESVIPSVKEFLKA--RKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~~~  218 (344)
                      .++.++|.|+++++|...+..+...|++|++++++.++.+.. +   +.+... .+..+-.+. +...++...  ...++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQ-GDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            467899999999999999998888899999999887654332 2   234332 233332222 112222211  12346


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        94 iDilVnnAG  102 (169)
T PRK06720         94 IDMLFQNAG  102 (169)
T ss_pred             CCEEEECCC
Confidence            899999988

>PLN02476 O-methyltransferase

Probab=97.21  E-value=0.0055  Score=52.95  Aligned_cols=105  Identities=17%  Similarity=0.268  Sum_probs=70.6

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...+..+.++||-+|.  ++|..++.+++.+  +.+|+.++.+++..+.++    +.|...-+.....+..+.+.++...
T Consensus       112 ~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~  189 (278)
T PLN02476        112 MLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQN  189 (278)
T ss_pred             HHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence            4555667889999994  7788888888876  457999999998777774    4565433333333443323332211


Q ss_pred             hcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEE
Q 019196          214 RKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       214 ~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (344)
                      .....||+||--...    ..++.+++.++++|.++.
T Consensus       190 ~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        190 GEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             ccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            123579999866554    356888999999999876

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.21  E-value=0.00096  Score=57.82  Aligned_cols=101  Identities=18%  Similarity=0.325  Sum_probs=62.4

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .+.+.+++++|++||-+|+  |.|-.+..+++..|++|++++.|+++.+.++    +.|....+.....++.+    +  
T Consensus        53 ~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~----~--  124 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD----L--  124 (273)
T ss_dssp             HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG-------
T ss_pred             HHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc----c--
Confidence            4458889999999999996  5899999999999999999999999888774    34532111111122211    1  


Q ss_pred             HhcCCCccEEEe-----CCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYD-----PVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                         ...||.|+.     .+|.    ..++.+.++|+|+|+++.-.
T Consensus       125 ---~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  125 ---PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             -----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             ---CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence               127998854     3443    23577889999999987543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0095  Score=51.10  Aligned_cols=107  Identities=23%  Similarity=0.232  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH----HhcCCcE-EE--eCCCCC-chhhHHHHHHH---
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVDH-VV--DLSNES-VIPSVKEFLKA---  213 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-v~--~~~~~~-~~~~~~~~~~~---  213 (344)
                      .++++||+|+++++|..+++.+...|++|++.. ++.++.+..    +..+... .+  |..+.+ ......++.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            367899999999999999999999999998864 444443322    2223221 12  222211 11112222211   


Q ss_pred             h-cCCCccEEEeCCChh-----------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          214 R-KLKGVDVLYDPVGGK-----------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       214 ~-~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      . ...++|++++++|..           .               .+.++..+++.|+++.++....
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            1 123799999998731           0               1235556677899999886654

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.20  E-value=0.013  Score=48.35  Aligned_cols=99  Identities=20%  Similarity=0.429  Sum_probs=67.1

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHH----hcC-CcEEEeCCCCCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLG-VDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      ....+.++++||-+|+ |. |.+++++++..+  .+|++++.+++..+.++    .+| .+.+.... .+.    .+...
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~----~~~l~  106 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEA----PEILF  106 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ech----hhhHh
Confidence            4567889999999998 55 999999988764  58999999988777664    355 22222111 111    11111


Q ss_pred             HhcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEE
Q 019196          213 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (344)
                      .. ...||.||...+.    ..+..+.+.|+++|+++.
T Consensus       107 ~~-~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        107 TI-NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             hc-CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            11 2479999986553    356778889999999985

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=97.20  E-value=0.0028  Score=50.55  Aligned_cols=81  Identities=23%  Similarity=0.327  Sum_probs=50.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC--HHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG--AEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~--~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++||+|+++++|...++.+-..|+ +|+++.++  .++.+.+    ++.+....+-.-+....+.++++.+..  ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999999988887877 77788877  3443333    334532222112222222334443332  2357


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|+|.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999884

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0042  Score=55.29  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .+++++|+|+++++|..++..+...|++|++++++.++.+.+. ++     +.. ..+..+-.+. +.++++.+..  ..
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~-~sv~~~~~~~~~~~   91 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL-ASVAALGEQLRAEG   91 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCH-HHHHHHHHHHHHhC
Confidence            3679999999999999999998889999999999887655432 22     111 1222222222 2233332221  23


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|+++|.
T Consensus        92 ~~iD~li~nAG~  103 (313)
T PRK05854         92 RPIHLLINNAGV  103 (313)
T ss_pred             CCccEEEECCcc
Confidence            469999999873

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0052  Score=53.22  Aligned_cols=81  Identities=20%  Similarity=0.313  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.++.+..    .+.+.. ..+..+-.+. +.+.+..+..  ...+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY-AAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            578999999999999999999988999999999987765433    222322 2222222221 2233322221  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|++.+
T Consensus        87 iD~vi~~ag   95 (264)
T PRK07576         87 IDVLVSGAA   95 (264)
T ss_pred             CCEEEECCC
Confidence            899999876

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0042  Score=53.61  Aligned_cols=78  Identities=22%  Similarity=0.256  Sum_probs=52.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cC-C-cEEE--eCCCCCchhhHHHHHHHh---cCCCc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG-V-DHVV--DLSNESVIPSVKEFLKAR---KLKGV  219 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g-~-~~v~--~~~~~~~~~~~~~~~~~~---~~~~~  219 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+.. .+ . ...+  |..+.+.   +.+..+..   ...++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAA---WDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHH---HHHHHHHHHHHcCCCC
Confidence            479999999999999999888899999999998887665533 32 1 1222  3333221   23322211   13579


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++|+|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999999874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=97.18  E-value=0.0069  Score=50.26  Aligned_cols=103  Identities=18%  Similarity=0.266  Sum_probs=73.0

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHH----hcCCcEEEeCCC-CCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSN-ESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~-~~~~~~~~~~~~  212 (344)
                      ..++.+..++||=+|  +.+|+.++.+|..+.  .+++.++.++++.+.++    +.|.+..+..-. .+.   ++.+.+
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gda---l~~l~~  127 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDA---LDVLSR  127 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcH---HHHHHh
Confidence            455667888999999  588999999998875  48999999999888775    456554332222 344   333333


Q ss_pred             HhcCCCccEEEe-CCCh---hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYD-PVGG---KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||+||- +.-.   +.++.+++.+++||.++.=.
T Consensus       128 -~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         128 -LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             -ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence             33467999984 4433   46788999999999998743

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.18  E-value=0.0045  Score=53.15  Aligned_cols=80  Identities=20%  Similarity=0.353  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HHHHHhcCCcE-EE--eCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDH-VV--DLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|.++++.+...|++|+++.++..+  .+..++.+.+. .+  |..+.+   .++++.+..  ...+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK---DIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH---HHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999988775432  22334445332 22  332222   233333221  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999999873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.17  E-value=0.014  Score=48.06  Aligned_cols=78  Identities=28%  Similarity=0.358  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+.+++|+|++|++|..++..+...|++|+++.++.++.+.+. ++    +.. +...+..+    ..++....  .++|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~--~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSD----DAARAAAI--KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCC----HHHHHHHH--hcCC
Confidence            5679999999999999999888888999999999887765543 23    222 11111111    12222222  3689


Q ss_pred             EEEeCCChhh
Q 019196          221 VLYDPVGGKL  230 (344)
Q Consensus       221 ~vid~~g~~~  230 (344)
                      +||.+++...
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999988654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06194 hypothetical protein; Provisional

Probab=97.17  E-value=0.0049  Score=54.04  Aligned_cols=81  Identities=23%  Similarity=0.414  Sum_probs=52.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc---CCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL---GVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      ++++||+||+|++|..++..+...|++|++++++.++.+.. +++   +... .+..+-.+. +.+.++....  ...++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFGAV   84 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            57899999999999999998888999999999887654433 222   3322 232222221 1233332211  12468


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|+++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0039  Score=54.36  Aligned_cols=82  Identities=21%  Similarity=0.220  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hh---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KS---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+ ++   .+... .+..+-.+ .+.+.++....  ....
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999887665433 22   34322 22222111 12233322211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|++.|.
T Consensus        84 id~li~nAg~   93 (275)
T PRK05876         84 VDVVFSNAGI   93 (275)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0033  Score=54.90  Aligned_cols=79  Identities=18%  Similarity=0.267  Sum_probs=53.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CCc-EEE--eCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HVV--DLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.+. +.. ..+  |..+.+.   +.+..+..  ...++|
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~---~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDA---IDAVVADAEATFGPID   80 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHH---HHHHHHHHHHHhCCCC
Confidence            56899999999999999999988999999999998876655443 221 122  2222221   22222211  123689


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++|+|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.16  E-value=0.0038  Score=55.83  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC---Cc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG---VD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+ +++.   .. ..+..+-.+ .+.+.+.....  ...+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCCC
Confidence            467899999999999999998888899999999988766544 3332   11 122222111 12233332221  2346


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        84 iD~li~nAg   92 (322)
T PRK07453         84 LDALVCNAA   92 (322)
T ss_pred             ccEEEECCc
Confidence            999999987

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0034  Score=53.94  Aligned_cols=82  Identities=23%  Similarity=0.287  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.+..+...++....  .+..+-.+. +.+.......  ...++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999999999889999999999876544444432111  222222222 1122222211  1246899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++|+|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999874

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.14  E-value=0.002  Score=58.05  Aligned_cols=94  Identities=21%  Similarity=0.283  Sum_probs=63.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcC---C-cEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG---V-DHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+|||+|+ |++|..+++.+...+ .+|++.+++.++.+.+....   . ...+|..+.+.   +.+++     .++|+|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~a---l~~li-----~~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDA---LVALI-----KDFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHH---HHHHH-----hcCCEE
Confidence            46999999 999999999988887 69999999999888886553   1 12333333322   33333     245999


Q ss_pred             EeCCChhhHHHHH-hcccCCCEEEEEecc
Q 019196          223 YDPVGGKLTKESL-KLLNWGAQILVIGFA  250 (344)
Q Consensus       223 id~~g~~~~~~~~-~~l~~~G~~v~~g~~  250 (344)
                      |+|.+...-..++ .+++.+=.+++....
T Consensus        73 In~~p~~~~~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          73 INAAPPFVDLTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             EEeCCchhhHHHHHHHHHhCCCEEEcccC
Confidence            9999975544555 444444466665543

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0042  Score=53.39  Aligned_cols=82  Identities=17%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HH-H---HHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK-F---LKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~-~---~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++ .+ .   ++..+... .+..+-.+. +.+.+.....  ...
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK-ADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999876432 22 2   22334222 222222111 1233332221  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      .+|++++|.|.
T Consensus        86 ~id~li~~ag~   96 (254)
T PRK06114         86 ALTLAVNAAGI   96 (254)
T ss_pred             CCCEEEECCCC
Confidence            68999999984

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.14  E-value=0.0057  Score=52.58  Aligned_cols=80  Identities=25%  Similarity=0.412  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..|... .+  |..+..   .+.++....  ..
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD---AVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH---HHHHHHHHHHHhc
Confidence            468999999999999999999888899999999987755433    2223222 22  222222   233332221  23


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|++.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            468999999874

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0059  Score=52.51  Aligned_cols=82  Identities=22%  Similarity=0.298  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. +   .+.. ..+..+-.+ .+.++...+..  ....
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFGR   82 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999899999999999877654442 2   2322 122222111 11232222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999998863

>PRK08303 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0047  Score=54.79  Aligned_cols=35  Identities=34%  Similarity=0.444  Sum_probs=32.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .++++||+|+++++|.++++.+...|++|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            46899999999999999999999899999999886

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0043  Score=53.59  Aligned_cols=80  Identities=24%  Similarity=0.411  Sum_probs=51.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      .++||+|++|++|..+++.+...|++|++++++.++.+.+    +..+... ++..+-.+. +.........  ...++|
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGGID   80 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999988999999999987654433    2233322 222221111 1222222221  123689


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++|++.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=97.13  E-value=0.0014  Score=54.11  Aligned_cols=105  Identities=16%  Similarity=0.272  Sum_probs=69.2

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..+....++||-+|  +.+|+.++.+|+.+  +.+|+.++.+++..+.++    +.|...-+.....+..+.+.++....
T Consensus        40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~  117 (205)
T PF01596_consen   40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDG  117 (205)
T ss_dssp             HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTT
T ss_pred             HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhcc
Confidence            34445667899999  57899999999876  579999999999887774    34543323333334422233333222


Q ss_pred             cCCCccEEE-eCCCh---hhHHHHHhcccCCCEEEEE
Q 019196          215 KLKGVDVLY-DPVGG---KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 ~~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~  247 (344)
                      ....||+|| |+.-.   ..++.++++++++|.++.=
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            234799997 44433   3567788999999998873

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0049  Score=52.90  Aligned_cols=80  Identities=20%  Similarity=0.304  Sum_probs=52.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      ++++||+|+++++|...++.+...|++|++++++.++.+.+.+    .+.. ..+..+-.+ .+.+.++....  ...++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCCc
Confidence            4689999999999999999999999999999998776554422    2222 223222211 11233322221  12468


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |+++++.|
T Consensus        80 d~lI~~ag   87 (252)
T PRK07677         80 DALINNAA   87 (252)
T ss_pred             cEEEECCC
Confidence            99999987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.11  E-value=0.0052  Score=53.51  Aligned_cols=81  Identities=26%  Similarity=0.332  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHH---HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++  ++|.++++.+...|++|+++.++.+..   +.+ +++|....+..+-.+. +.++++.+..  ..+
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~-~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDI-ASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCH-HHHHHHHHHHHHHhC
Confidence            468899999975  999999999999999999988764322   222 3345333332222221 2233333322  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|++++|+|
T Consensus        85 ~iD~lVnnAG   94 (271)
T PRK06505         85 KLDFVVHAIG   94 (271)
T ss_pred             CCCEEEECCc
Confidence            7999999987

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.10  E-value=0.005  Score=52.64  Aligned_cols=82  Identities=22%  Similarity=0.313  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC--Cc-EEEeCCCCCchhhHHHHHHH--hcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VD-HVVDLSNESVIPSVKEFLKA--RKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~  219 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. .+.  .. ..+..+-.+. +.+......  ....++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE-ADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            3568999999999999999998888999999999987665542 222  11 1222222211 112222221  122469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|.+.|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0051  Score=52.87  Aligned_cols=74  Identities=27%  Similarity=0.343  Sum_probs=50.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHhcCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+.. .++  |..+.      ..+.... ..++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~-~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA------IDRAQAA-EWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH------HHHHHHh-cCCC
Confidence            357999999999999999999999999999999876554443    22322 122  32222      2222222 2379


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|+|+|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.012  Score=50.04  Aligned_cols=105  Identities=21%  Similarity=0.281  Sum_probs=62.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HH----HHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK----FLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +++++||+|++|++|..++..+...|++++++.++.+. .+    .++..+.. ..+..+-.+. +.+.+..+..  ...
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA-AAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999999999999999999999998877765332 22    22233322 2222222221 1122222211  124


Q ss_pred             CccEEEeCCChh-----------h---------------HHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK-----------L---------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++|.++|..           .               ...++..++..|+++.++...
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  142 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV  142 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence            689999998731           0               123444556778999987543

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0049  Score=52.90  Aligned_cols=82  Identities=24%  Similarity=0.288  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. ..+.++.+..  ...+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRD-AEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHhCC
Confidence            467999999999999999998888899999999987765433    233322 2222222111 1222222211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++++.|.
T Consensus        85 id~li~~ag~   94 (253)
T PRK06172         85 LDYAFNNAGI   94 (253)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0039  Score=53.39  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=48.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++++|+|++|++|..+++.+...|++|++++++.. +..... .+....+..+-.+.    ..+....  .++|++++|
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~--~~iDilVnn   86 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKE----ESLDKQL--ASLDVLILN   86 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCH----HHHHHhc--CCCCEEEEC
Confidence            578999999999999999999889999999988762 222111 11112222222221    2222222  369999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      +|.
T Consensus        87 AG~   89 (245)
T PRK12367         87 HGI   89 (245)
T ss_pred             Ccc
Confidence            874

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.005  Score=53.11  Aligned_cols=82  Identities=27%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. ++     +.. ..+..+-.+. +.+.+.....  ..
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   84 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEAF   84 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHHh
Confidence            3678999999999999999999899999999999877655442 22     221 1222221111 1122222211  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++++++|.
T Consensus        85 g~id~li~~ag~   96 (260)
T PRK07063         85 GPLDVLVNNAGI   96 (260)
T ss_pred             CCCcEEEECCCc
Confidence            469999999873

>PRK06101 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0055  Score=52.21  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=50.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC-cEE--EeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHV--VDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|+|++|++|...+..+...|++|+++++++++.+.+.+.+. ...  .|..+.   +.+++..+.... ..|.++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~-~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH---PGTKAALSQLPF-IPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH---HHHHHHHHhccc-CCCEEEE
Confidence            579999999999999998888889999999999887766644331 122  233322   224444443322 4577776


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        78 ~ag   80 (240)
T PRK06101         78 NAG   80 (240)
T ss_pred             cCc
Confidence            665

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.007  Score=52.17  Aligned_cols=80  Identities=30%  Similarity=0.450  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .+++++|.|+++++|..+++.+...|++|++++++.++.+.+. ++    +.. ..+..+-.+ .+.+.++.+..  ..+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CCC
Confidence            3689999999999999999999889999999999887665432 12    222 222222222 12233443332  469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++|.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0055  Score=54.35  Aligned_cols=81  Identities=28%  Similarity=0.394  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++     +.. ..+..+-.+. +.++++....  ..
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL-ASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHhhC
Confidence            467999999999999999998888899999999987765433 111     111 1222222222 1233332221  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++|+++|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            46999999987

>PRK05717 oxidoreductase; Validated

Probab=97.07  E-value=0.0059  Score=52.49  Aligned_cols=82  Identities=21%  Similarity=0.235  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.. +.++... .+..+-.+. +.+.+..+..  ...++|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE-AQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999999988899999998876654443 3444221 222222221 1122222211  1236899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|++.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9998873

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.06  E-value=0.0069  Score=52.03  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hh---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KS---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ .+   .+... .+..+-.+. +.+.+.....  ...+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK-QEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH-HHHHHHHHHHHHhcCC
Confidence            467899999999999999999988999999999987765443 22   23221 222222221 1233322211  2246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++++.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            9999999873

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.012  Score=51.71  Aligned_cols=105  Identities=23%  Similarity=0.296  Sum_probs=62.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HH----HHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK----FLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|+++.++.++ .+    .++..+... .+..+-.+ .+.+.+..+..  ...
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            46789999999999999999888889999988876432 21    122233322 22222221 11222222211  124


Q ss_pred             CccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++|+++|..                           ..+.++..+++.|+++.++...
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~  184 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT  184 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            689999988731                           0123344556778999888644

>PRK09186 flagellin modification protein A; Provisional

Probab=97.06  E-value=0.0049  Score=52.93  Aligned_cols=79  Identities=27%  Similarity=0.364  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc----CCc-E---EEeCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL----GVD-H---VVDLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~-~---v~~~~~~~~~~~~~~~~~~~--  214 (344)
                      .++++||+|++|++|..++..+...|++|+++++++++.+.+ +++    +.. .   ..|..+.+.   +.++....  
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQES---LEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHH---HHHHHHHHHH
Confidence            468899999999999999999999999999999887765544 222    221 1   223333222   22222211  


Q ss_pred             cCCCccEEEeCCC
Q 019196          215 KLKGVDVLYDPVG  227 (344)
Q Consensus       215 ~~~~~d~vid~~g  227 (344)
                      ...++|++++|.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence            1246899999985

>PRK08589 short chain dehydrogenase; Validated

Probab=97.06  E-value=0.0063  Score=52.94  Aligned_cols=79  Identities=30%  Similarity=0.437  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHH-HHh---cCCc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKS---LGVD-HV--VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~---~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|..+++.+...|++|++++++ ++.+. +++   .+.. ..  .|..+.+.   +..+....  ..
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~   80 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQ---VKDFASEIKEQF   80 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHHHc
Confidence            46789999999999999999888899999999988 44332 222   2322 12  23333222   22222221  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++++++|.
T Consensus        81 g~id~li~~Ag~   92 (272)
T PRK08589         81 GRVDVLFNNAGV   92 (272)
T ss_pred             CCcCEEEECCCC
Confidence            468999999873

>PRK08643 acetoin reductase; Validated

Probab=97.05  E-value=0.006  Score=52.46  Aligned_cols=81  Identities=20%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+... .+..+-.+. +.+.+.....  ...++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDR-DQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            468999999999999999999889999999999877654442    223221 222221111 1122322221  12469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|+|+|.
T Consensus        81 d~vi~~ag~   89 (256)
T PRK08643         81 NVVVNNAGV   89 (256)
T ss_pred             CEEEECCCC
Confidence            999999864

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0054  Score=52.79  Aligned_cols=81  Identities=22%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+..++   .+.. ..+..+-.+. +.+.......  ...++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD-AQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCCC
Confidence            36789999999999999999888899999999988776543333   3322 2222222211 2222222211  12478


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|+|+|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999998

>PRK09242 tropinone reductase; Provisional

Probab=97.05  E-value=0.0076  Score=51.85  Aligned_cols=82  Identities=24%  Similarity=0.348  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----CCcE-EEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVDH-VVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~-v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. ++     +... .+..+-.+ .+.+++.....  ..
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   86 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDHW   86 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999887655442 21     2221 12122111 11222222211  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|+++++.|.
T Consensus        87 g~id~li~~ag~   98 (257)
T PRK09242         87 DGLHILVNNAGG   98 (257)
T ss_pred             CCCCEEEECCCC
Confidence            469999999974

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.05  E-value=0.0056  Score=52.45  Aligned_cols=79  Identities=28%  Similarity=0.433  Sum_probs=52.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccEEEe
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDVLYD  224 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~vid  224 (344)
                      +++|+|++|++|..++..+...|++|+++++++++.+.+.. ++... .+..+-.+. +.+.+.....  ...++|.++.
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEEE
Confidence            68999999999999999998899999999999887665533 44322 222222111 2233332221  1246999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      ++|.
T Consensus        81 ~ag~   84 (248)
T PRK10538         81 NAGL   84 (248)
T ss_pred             CCCc
Confidence            8863

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.05  E-value=0.0062  Score=52.51  Aligned_cols=82  Identities=24%  Similarity=0.422  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    ..+... .+..+-.+. +.+.+.....  ...+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~-~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE-ADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            4688999999999999999999889999999999887655443    223221 222222111 1132222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|.++.++|.
T Consensus        90 id~vi~~ag~   99 (259)
T PRK08213         90 VDILVNNAGA   99 (259)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK07985 oxidoreductase; Provisional

Probab=97.05  E-value=0.011  Score=52.23  Aligned_cols=105  Identities=22%  Similarity=0.249  Sum_probs=63.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH--HHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|..+++.+...|++|+++.++.  ++.+.+    ++.+... .+..+-.+ .+.+.++.+..  ..
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~  126 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKAL  126 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            457899999999999999999998999998876542  222222    2233222 22222111 12233332221  23


Q ss_pred             CCccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          217 KGVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       217 ~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++|+++++.|..                           .++.++..++.+|+++.++...
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~  188 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ  188 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence            4689999987631                           1134445566789999887554

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.04  E-value=0.005  Score=53.06  Aligned_cols=80  Identities=26%  Similarity=0.377  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh---cCCcE---EEeCCCCCc-hhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH---VVDLSNESV-IPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~-~~~~~~~~~~~~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|+++++++...+..++   .+.+.   ..|..+.+. ....+++.+.  ..+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA--FGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH--cCC
Confidence            36789999999999999999998899999999987543333332   33322   223333211 1112222222  246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999986

>PRK06484 short chain dehydrogenase; Validated

Probab=97.04  E-value=0.0046  Score=59.22  Aligned_cols=80  Identities=35%  Similarity=0.534  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE---EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++...   ..|..+.+   ..+++....  ...++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEA---QIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH---HHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999999999988876554 4555332   22333222   233333221  12469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+++++.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999999863

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.02  E-value=0.018  Score=47.74  Aligned_cols=91  Identities=16%  Similarity=0.220  Sum_probs=59.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|||+|+ |.+|..-++.+...|++|++++.... ....+.+.|--..+   ..++.  ...      -.++|+||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~---~~~~~--~~d------l~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL---ARCFD--ADI------LEGAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE---eCCCC--HHH------hCCcEEEEE
Confidence            3679999999 99999999999899999999887543 33333333321111   11221  111      147999999


Q ss_pred             CCChh-hHHHHHhcccCCCEEEEEe
Q 019196          225 PVGGK-LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~-~~~~~~~~l~~~G~~v~~g  248 (344)
                      +++.+ .........+..|..+.+.
T Consensus        76 at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        76 ATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            99986 4445666666777777544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.02  E-value=0.0062  Score=51.80  Aligned_cols=80  Identities=28%  Similarity=0.425  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEE---eCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVV---DLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      +++++||+|++|++|..++..+...|++|+++.+++++.+..    ++.+....+   |..+..   .+.+.....  ..
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA---AVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH---HHHHHHHHHHHHh
Confidence            356899999999999999999888899999999987764433    333433222   222221   122222211  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      ..+|.++.+++.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            468999999864

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.02  E-value=0.0066  Score=52.20  Aligned_cols=106  Identities=24%  Similarity=0.276  Sum_probs=65.4

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .+++++|+|++  +++|.++++.+...|++|+++.++.+..+.++++...  ..+..+-.+. +.++++.+..  ....+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCCC
Confidence            46899999998  6999999999988999999998874333334443211  1222222211 2233332221  12469


Q ss_pred             cEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          220 DVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       220 d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      |++++++|..                              .....+..++.+|+++.++...+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~  147 (252)
T PRK06079         85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS  147 (252)
T ss_pred             CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence            9999988731                              01334456777899988876543

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.007  Score=51.88  Aligned_cols=81  Identities=19%  Similarity=0.318  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +   .+.. ..+..+-.+. ..++++.+..  ....
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHGR   85 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999999999876654432 2   2322 2222222222 1122222211  1235


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|+++++.+
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899999887

>PRK04148 hypothetical protein; Provisional

Probab=97.02  E-value=0.011  Score=45.04  Aligned_cols=86  Identities=21%  Similarity=0.246  Sum_probs=57.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEe-CCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD-LSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      ..+.+++++|. | .|..++..+...|.+|++++.+++..+.+++.+.+.+.+ .-+.+.     ++     -.++|+|+
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-----~~-----y~~a~liy   82 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-----EI-----YKNAKLIY   82 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----HH-----HhcCCEEE
Confidence            34578999998 6 888677777788999999999999999898887654432 222221     11     14688998


Q ss_pred             eCCChhhH-HHHHhcccCCC
Q 019196          224 DPVGGKLT-KESLKLLNWGA  242 (344)
Q Consensus       224 d~~g~~~~-~~~~~~l~~~G  242 (344)
                      .+-..+.+ ...++.-++-|
T Consensus        83 sirpp~el~~~~~~la~~~~  102 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKIN  102 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcC
Confidence            88776433 33444433333

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.02  E-value=0.017  Score=46.37  Aligned_cols=100  Identities=21%  Similarity=0.396  Sum_probs=68.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ...++++++.++=+|+  +.|..++++++.. ..+|+++++++++.+..    ++||.+.+.......     .+.+.  
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A-----p~~L~--   98 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA-----PEALP--   98 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc-----hHhhc--
Confidence            4567889998887887  5577788888543 45999999999877766    457866433222221     11111  


Q ss_pred             cCCCccEEEeCCCh---hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  248 (344)
                      +-..+|.+|---|.   ..++.++..|+++|++|.-.
T Consensus        99 ~~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242          99 DLPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            12269999976664   46788999999999998743

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.01  E-value=0.0092  Score=55.28  Aligned_cols=138  Identities=19%  Similarity=0.268  Sum_probs=88.7

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCE-EE----------------EecCCCceeeEEeecc-cC----C-CCCCCHHHHhh
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDT-VC----------------GFAALGSFAQFIVADQ-FP----V-PKGCDLLAAAA  126 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~-V~----------------~~~~~g~~~~~~~~~~-~~----~-P~~~~~~~aa~  126 (344)
                      .-|.|+++.+.+|+++....-.|+. ++                |...++.|++++.++. ++    + +..+|...+|.
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k~vr~~t~i~~~~vSv~~~Av  168 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGKRVRTETDISAGAVSISSAAV  168 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhcCCCCCCcCHHHHHH
Confidence            4688999999999998876666664 22                2222357777776665 32    2 33333333321


Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHH-HHHhcCCcEEEeCCCCCch
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIK-FLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~  204 (344)
                              -.+. +....-++++|+|+|+ |.+|..+++.++..| .+|+++.++.++.. .++++|.. .+..      
T Consensus       169 --------~la~-~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~------  231 (417)
T TIGR01035       169 --------ELAE-RIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF------  231 (417)
T ss_pred             --------HHHH-HHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH------
Confidence                    0111 2223356789999999 999999999999999 58999999988754 55677753 2221      


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCChh
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~  229 (344)
                         .+.....  .++|+||+|++.+
T Consensus       232 ---~~l~~~l--~~aDvVi~aT~s~  251 (417)
T TIGR01035       232 ---EDLEEYL--AEADIVISSTGAP  251 (417)
T ss_pred             ---HHHHHHH--hhCCEEEECCCCC
Confidence               1111111  3699999999863

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0087  Score=51.18  Aligned_cols=81  Identities=26%  Similarity=0.325  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. +   .+.. ..+..+-.+. +.+.+.....  ...+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP-DSAKAMADATVSAFGG   83 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHhCC
Confidence            4578999999999999999988888999999999876543332 2   2222 1222222221 1122222211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+|+|
T Consensus        84 id~vi~~ag   92 (250)
T PRK07774         84 IDYLVNNAA   92 (250)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.01  E-value=0.0079  Score=51.69  Aligned_cols=82  Identities=23%  Similarity=0.342  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|.|+++++|..++..+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.+....+..  ...+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCC
Confidence            478999999999999999998888899999999987655433    233322 1222221111 1122222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|.++.+.|.
T Consensus        89 id~vi~~ag~   98 (256)
T PRK06124         89 LDILVNNVGA   98 (256)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.00  E-value=0.002  Score=60.50  Aligned_cols=95  Identities=18%  Similarity=0.153  Sum_probs=64.4

Q ss_pred             HhcCCCCCCEEE----EecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLL----VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vl----I~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ...++++++++|    |+|++|++|.+++|+++..|++|+++.....+....+..+.+ .+++.+....   ..++....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITD---PADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCC---HHHHHHHH
Confidence            456678888888    888889999999999999999999988766544333333443 3555554444   22221111


Q ss_pred             cCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          215 KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       215 ~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                                    ..+...++.+.++|+++.++...
T Consensus       104 --------------~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        104 --------------EFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHhccCCCEEEEEcccc
Confidence                          34456677888888888887554

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.007  Score=51.92  Aligned_cols=78  Identities=26%  Similarity=0.382  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++    +..+.. ..+..+-.+. +.+++.....  ....+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999998899999999988764    112211 1222221111 1233332211  12468999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |+|.|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            999873

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.00  E-value=0.0064  Score=53.03  Aligned_cols=81  Identities=21%  Similarity=0.280  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+++++|+|++|++|..++..+...|++|++++++.++.+.+ +   +.+.. ..+..+-.+. +.+..+....  ...+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            467899999999999999999988999999999987655433 2   22322 1222222211 1123222211  1247


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+|+|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.007  Score=51.74  Aligned_cols=80  Identities=25%  Similarity=0.355  Sum_probs=51.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----c--CCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~--g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      ++++||+|++|++|..+++.+...|++|+++++++++.+.+..    .  +.. .++..+-.+. +.+.+..+..  ...
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4689999999999999998888889999999998876654421    1  211 2222222221 1222222211  234


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        81 ~id~vi~~ag   90 (248)
T PRK08251         81 GLDRVIVNAG   90 (248)
T ss_pred             CCCEEEECCC
Confidence            6999999987

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0088  Score=51.51  Aligned_cols=81  Identities=20%  Similarity=0.154  Sum_probs=52.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCC--c-EEEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV--D-HVVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      ..++||+|++|++|..++..+...|++|++++++.++.+.+. ++..  + ..+..+-.+. +.+.+..+..  ....+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCCC
Confidence            368999999999999999999888999999999887765443 2221  1 1222222211 2233332221  123589


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus        81 ~lv~~ag~   88 (257)
T PRK07024         81 VVIANAGI   88 (257)
T ss_pred             EEEECCCc
Confidence            99999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0082  Score=50.89  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC---CcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .+.+++|+|++|++|..+++.+...|++|+++++++++.+.+ +++.   ....+..+-.+. ..+.+..+..  ...++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCCC
Confidence            367899999999999999998888899999999988765544 3332   112222222211 1122222211  12379


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|++.+.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0064  Score=52.04  Aligned_cols=82  Identities=24%  Similarity=0.339  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc--CCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .+++++|+|++|++|..+++.+...|++|+++.++.++.+... .+  +.. ..+..+-.+. +.+.+.....  ...++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCC
Confidence            3578999999999999999988888999999999877554432 22  321 2222222221 1133222211  12479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+++.|.+.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0023  Score=55.61  Aligned_cols=77  Identities=23%  Similarity=0.390  Sum_probs=50.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      +++++|+|++|++|..+++.+...|++|++++++.++.+..  .+.. ...|..+.+.   +++..+..  ....+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~---~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDAS---VQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHH---HHHHHHHHHHhCCCCCEEE
Confidence            46899999999999999999888899999999986654322  1221 1223333222   22222211  124689999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +|.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99984

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.97  E-value=0.005  Score=49.37  Aligned_cols=103  Identities=25%  Similarity=0.304  Sum_probs=68.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC-CCCC-------------chhhHHHHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL-SNES-------------VIPSVKEFLK  212 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~-~~~~-------------~~~~~~~~~~  212 (344)
                      ..+|+|+|+ |.+|+.++.+++.+|+++++.+...++.+..+..++..+... ....             .......+.+
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            368999999 999999999999999999999999998888888776544331 1100             0111222222


Q ss_pred             HhcCCCccEEEeCCC--h---h--hHHHHHhcccCCCEEEEEeccCC
Q 019196          213 ARKLKGVDVLYDPVG--G---K--LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       213 ~~~~~~~d~vid~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ..  ..+|+++.+.-  +   +  ..++.++.|+++..++++....+
T Consensus        99 ~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g  143 (168)
T PF01262_consen   99 FI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG  143 (168)
T ss_dssp             HH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred             HH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence            22  35799985432  1   2  23778899999999999876554

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0097  Score=51.84  Aligned_cols=80  Identities=21%  Similarity=0.318  Sum_probs=52.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCc-EEEeCCCCCchhhHHHHHHH--hcCCCccEEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVVDLSNESVIPSVKEFLKA--RKLKGVDVLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~d~vi  223 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+++ .+.. ..+..+-.+. +.+.+....  ....++|++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDS-AAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            579999999999999999888889999999999887766543 2322 1222222211 112222221  1224689999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +|+|.
T Consensus        82 ~~ag~   86 (276)
T PRK06482         82 SNAGY   86 (276)
T ss_pred             ECCCC
Confidence            99873

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.96  E-value=0.0084  Score=50.94  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=52.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +.+++|.|++|++|..++..+...|++|+++++++++.+..    +..+... .+..+-.+. ..+.+..+..  ...++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY-EEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH-HHHHHHHHHHHHHcCCc
Confidence            57899999999999999998888999999999987755433    2223222 222222222 2233333221  12478


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999874

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.011  Score=50.37  Aligned_cols=82  Identities=23%  Similarity=0.263  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ..+++||+|++|++|..++..+...|++|++++++.++.+.+.    +.+... .+..+-.+. +.+....+..  ...+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            4578999999999999999999889999999999877654442    223221 222222222 1122222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      .|++++++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.96  E-value=0.023  Score=48.54  Aligned_cols=104  Identities=24%  Similarity=0.290  Sum_probs=62.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHH----HHHhcCCcE-EE--eCCCCCc-hhhHHHHHHHhcCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIK----FLKSLGVDH-VV--DLSNESV-IPSVKEFLKARKLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~----~~~~~g~~~-v~--~~~~~~~-~~~~~~~~~~~~~~  217 (344)
                      ++++||+|++|++|..++..+...|++++++.++ .++..    .+++.+... .+  |..+.+. ....+++.+.  ..
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR--YG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH--cC
Confidence            5789999999999999999888899998776643 22222    223333321 22  2222221 1111222222  24


Q ss_pred             CccEEEeCCCh----h----------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGG----K----------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~----~----------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|.+|.++|.    +                      ..+.+...++..|+++.++...+
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            68999999973    0                      01334556677899999886554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.96  E-value=0.0091  Score=51.49  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=51.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      ++||+|+++++|..+++.+...|++|+++++++++.+.+. +   .+....+..+-.+. +.++++.+..  ...++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999889999999999877654442 2   23222333322221 1233333221  12469999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      +++.|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            999873

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.95  E-value=0.032  Score=46.14  Aligned_cols=91  Identities=13%  Similarity=0.095  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|||.|+ |.+|...+..+...|++|+++.+... +...+...+. ....  ...+.+  .      .-.++|+||-
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~--~~~~~~--~------~l~~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWK--QKEFEP--S------DIVDAFLVIA   76 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEE--ecCCCh--h------hcCCceEEEE
Confidence            4678999999 99999999888888999998876532 2222222221 1111  111100  0      1247899999


Q ss_pred             CCChhhHHHHHhcccCCCEEEEEe
Q 019196          225 PVGGKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      |++.+..+..+...+..+.++.+.
T Consensus        77 aT~d~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         77 ATNDPRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             cCCCHHHHHHHHHHHHhCCcEEEC
Confidence            999876665444333445555443

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.95  E-value=0.0097  Score=43.91  Aligned_cols=92  Identities=17%  Similarity=0.269  Sum_probs=62.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCHHHHHHHHh-c---C--CcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKS-L---G--VDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~-~---g--~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      |+.+||-+|+  +.|..+..+++ ..+++|++++.+++-.+.+++ .   +  ....+...+...        ......+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--------~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEF--------DPDFLEP   70 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHG--------GTTTSSC
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcccc--------CcccCCC
Confidence            5788999996  66888888888 578899999999987777753 2   2  121111111100        0112357


Q ss_pred             ccEEEeCC-Ch----h------hHHHHHhcccCCCEEEEE
Q 019196          219 VDVLYDPV-GG----K------LTKESLKLLNWGAQILVI  247 (344)
Q Consensus       219 ~d~vid~~-g~----~------~~~~~~~~l~~~G~~v~~  247 (344)
                      ||+|+... ..    +      .++.+.+.|+|+|+++.-
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            99999877 22    2      267788999999999863

...

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0086  Score=52.55  Aligned_cols=36  Identities=33%  Similarity=0.527  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~   40 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV   40 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence            578999999999999999998888999999887654

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.95  E-value=0.0072  Score=53.92  Aligned_cols=95  Identities=21%  Similarity=0.256  Sum_probs=61.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+||+|-+|..++..+...|.+|.+++++.++...+...+... +..+-.+.    ..+....  .++|+||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~-v~~Dl~d~----~~l~~al--~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAEL-VYGDLSLP----ETLPPSF--KGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEE-EECCCCCH----HHHHHHH--CCCCEEEECCCC
Confidence            6999999999999999988888999999999876655555555433 22221111    2222222  368999998763


Q ss_pred             h-----h--------HHHHHhcccCCC--EEEEEecc
Q 019196          229 K-----L--------TKESLKLLNWGA--QILVIGFA  250 (344)
Q Consensus       229 ~-----~--------~~~~~~~l~~~G--~~v~~g~~  250 (344)
                      .     .        ....++.++..|  +++.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            1     0        123444454444  78887753

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.95  E-value=0.011  Score=50.85  Aligned_cols=82  Identities=20%  Similarity=0.266  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|+++++++++.+.+    ++.+.... +..+-.+ .+.+.+.....  ...+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999988655433    23343322 2222111 11122222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++.|+|.
T Consensus        85 ~d~vi~~ag~   94 (262)
T PRK13394         85 VDILVSNAGI   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=96.94  E-value=0.0079  Score=51.07  Aligned_cols=77  Identities=32%  Similarity=0.372  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+++++|+|++|++|..+++.+...|+ +|++++++.++.+.   .+.. ..+..+-.+ .+.+.+.....  ..+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence            457899999999999999999999999 99999988765443   3222 222222211 12234443332  3589999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.94  E-value=0.011  Score=50.81  Aligned_cols=80  Identities=24%  Similarity=0.423  Sum_probs=52.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+. +..++.....  ....+|++
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQ-DSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999989999999999887665543 33322 1222221111 1122222211  12468999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++|.+
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99886

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.94  E-value=0.0096  Score=50.50  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=51.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      ++++||+|+++++|..+++.+...|++|++++++.++. +.++..+.. .+..+-.+. +.+++.....  ...++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~-~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTN-AGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCH-HHHHHHHHHHHhhCCCccEEE
Confidence            46899999999999999999988999999999876532 333445532 232222111 1123332221  123699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      ++.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            99873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.93  E-value=0.009  Score=51.32  Aligned_cols=81  Identities=23%  Similarity=0.310  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|+++++++++.+.+.    ..+... .+..+-.+. +.+.+.....  ...+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            3578999999999999999988888999999999887654432    223222 222222211 1122222211  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|.+++
T Consensus        82 ~d~vi~~a~   90 (258)
T PRK12429         82 VDILVNNAG   90 (258)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0081  Score=51.86  Aligned_cols=82  Identities=24%  Similarity=0.290  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.+..+.+++   .+... .+..+-.+ .+.+.++....  ....+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999998899999999988653333332   23221 22222111 11122222211  12468


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0089  Score=51.89  Aligned_cols=79  Identities=20%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      ++||+|++|++|..++..+...|++|++++++.++.+.+    +..+.+. .+..+-.+. +...+.....  ...++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            689999999999999998888999999999988765543    2233222 222222221 2233333221  1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|+++|.
T Consensus        81 lI~~ag~   87 (270)
T PRK05650         81 IVNNAGV   87 (270)
T ss_pred             EEECCCC
Confidence            9999884

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.92  E-value=0.012  Score=50.06  Aligned_cols=82  Identities=29%  Similarity=0.390  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      +++++||+|++|++|..++..+...|+.|+...++.++.+.+ ..++... .+..+-.+ .+.+++.....  ...++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999888899998888887766554 3344222 22222211 12233322211  1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|+|.|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9999873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.92  E-value=0.0087  Score=51.41  Aligned_cols=82  Identities=20%  Similarity=0.304  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHHHhcCCcE-EEeCCCCCchhhHHHHHHH--hcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDH-VVDLSNESVIPSVKEFLKA--RKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~~~~d  220 (344)
                      .++++||+|++|++|..+++.+...|++|+.++++..  ..+.+++.+... .+..+-.+ .+.++++.+.  ....++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCCC
Confidence            3679999999999999999999989999988765432  223333444221 22222221 1223333222  1124699


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++|+|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.91  E-value=0.012  Score=51.41  Aligned_cols=106  Identities=24%  Similarity=0.332  Sum_probs=66.8

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHH---HHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  +++|.++++.+...|++|+++.++.+   +.+.+ ++++....+..+-.+. +.++++.+..  ...
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKP-EHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            46899999996  79999999999889999999888742   23322 3445333332222221 2233333222  124


Q ss_pred             CccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                              ..+..+..++++|+++.++...+
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~  147 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG  147 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence            699999998730                              02445567777899998876543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.01  Score=51.22  Aligned_cols=79  Identities=24%  Similarity=0.368  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHH---HHHHH-HhcCCcEEE--eCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHVV--DLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~-~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++.++|+|+++  ++|.++++.+...|++|++..++.+   ..+.+ ++.|....+  |..+.+   .++++.+..  .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~---~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK---SISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH---HHHHHHHHHHHH
Confidence            467899999986  8999999888888999998887632   12222 233433322  333322   233333322  1


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      .+.+|+++++.|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence            246999999876

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.89  E-value=0.005  Score=51.10  Aligned_cols=110  Identities=19%  Similarity=0.263  Sum_probs=69.8

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHH----HhcCCcEE-EeCC
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFL----KSLGVDHV-VDLS  199 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~----~~~g~~~v-~~~~  199 (344)
                      +..+...|.  +.+...++++++||-+|+  |.|+.++-+++..|.  +|+.++..++-.+.+    +.++...+ +...
T Consensus        55 is~P~~~a~--~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g  130 (209)
T PF01135_consen   55 ISAPSMVAR--MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG  130 (209)
T ss_dssp             E--HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES
T ss_pred             chHHHHHHH--HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc
Confidence            444444444  347788999999999995  678889988888775  689999887755444    34555422 2222


Q ss_pred             CCCchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEEe
Q 019196          200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      +...        .......||.|+-+.+.+.. ...++.|+++|+++..-
T Consensus       131 dg~~--------g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi  172 (209)
T PF01135_consen  131 DGSE--------GWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPI  172 (209)
T ss_dssp             -GGG--------TTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEE
T ss_pred             chhh--------ccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEE
Confidence            2110        01123579999988887655 56789999999999854

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.89  E-value=0.01  Score=51.26  Aligned_cols=82  Identities=15%  Similarity=0.188  Sum_probs=49.9

Q ss_pred             CCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~--~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+  ++++|.+.++.+...|++|+++.+++...+.++    +.+....+..+-.+. +.++++....  ...
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASD-DEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCH-HHHHHHHHHHHHHhC
Confidence            4678999996  579999999999889999998766532222222    234323333322222 2233333221  224


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++|+|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            69999999863

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.89  E-value=0.014  Score=50.30  Aligned_cols=81  Identities=22%  Similarity=0.323  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|...++.+...|++|+++.++ ++.+.+    .+.+.. ..+..+-.+ .+.+..+.+..  ...+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            46899999999999999999998899999999887 333222    233422 222222222 12233332221  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++++.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0072  Score=52.64  Aligned_cols=37  Identities=38%  Similarity=0.575  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .++++||+|++|++|..++..+...|++|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence            4578999999999999999998889999999998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.88  E-value=0.0097  Score=50.83  Aligned_cols=82  Identities=24%  Similarity=0.276  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|.+|..++..+...|++|++++++.++...+    ++.+... .+..+-.+ .+.+.+.....  ....
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            457899999999999999998888899999999986654332    2233221 22222211 12233322211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|.++.+.+.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999999864

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.87  E-value=0.025  Score=48.43  Aligned_cols=77  Identities=25%  Similarity=0.277  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..++..+...|++|++++++.     ....+.. ..+..+-.+ .+.+.+..+..  ....+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999999888999999999875     2222211 122222111 12233332221  12468999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |+|.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.87  E-value=0.011  Score=51.10  Aligned_cols=85  Identities=24%  Similarity=0.255  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcE-E--EeC---CCCCchhhHHHHHHHhc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-V--VDL---SNESVIPSVKEFLKARK  215 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-v--~~~---~~~~~~~~~~~~~~~~~  215 (344)
                      +.++..+++|.|++.++|++.+.-++..|+.|+++.++.+++..++ +++... +  +.+   +-.++. +.....+...
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~-~v~~~~~~l~  107 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYD-SVSKVIEELR  107 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHH-HHHHHHhhhh
Confidence            3455679999999999999999999999999999999999888775 343111 1  111   222332 2333333321


Q ss_pred             --CCCccEEEeCCCh
Q 019196          216 --LKGVDVLYDPVGG  228 (344)
Q Consensus       216 --~~~~d~vid~~g~  228 (344)
                        ...+|.+|+|+|.
T Consensus       108 ~~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGV  122 (331)
T ss_pred             hccCCcceEEEecCc
Confidence              2468999999995

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.011  Score=50.32  Aligned_cols=82  Identities=26%  Similarity=0.297  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCC-c---EEEeCCCC---CchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGV-D---HVVDLSNE---SVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~-~---~v~~~~~~---~~~~~~~~~~~~~  214 (344)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+. +   .+. .   ...|..+.   +.......+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            3578999999999999999999889999999999987655442 2   221 1   11233221   1211122222222


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                       ...+|.+|+|+|.
T Consensus        85 -~~~id~vi~~ag~   97 (239)
T PRK08703         85 -QGKLDGIVHCAGY   97 (239)
T ss_pred             -CCCCCEEEEeccc
Confidence             1368999999883

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0088  Score=50.65  Aligned_cols=81  Identities=19%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.++....    +..+.. .+..+-.+. +.++...+..  ...++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~-~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDP-QAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence            367999999999999999999888899999999977653322    222322 222221111 1122222211  12379


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+++++.+.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998873

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.013  Score=50.98  Aligned_cols=82  Identities=28%  Similarity=0.330  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +.++++|+|++|++|..+++.+...|++|++++++.++.+.+    +..+... .+..+-.+ .+.+.++.+..  ...+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            346899999999999999999888999999999887655433    2234332 22222222 12233333321  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|.++|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.84  E-value=0.013  Score=50.44  Aligned_cols=82  Identities=22%  Similarity=0.357  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..++..+...|+++++++++.++.+.+    +..+.+. .+..+-.+. +.+.+.....  ...+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~~   88 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE-QELSALADFALSKLGK   88 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            368999999999999999999988999999999887765443    2233221 222222111 1122222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.+.
T Consensus        89 ~d~li~~ag~   98 (255)
T PRK06113         89 VDILVNNAGG   98 (255)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.01  Score=51.61  Aligned_cols=41  Identities=24%  Similarity=0.413  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF  186 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~  186 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~   46 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA   46 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            36799999999999999999998899999999988765443

>PRK12743 oxidoreductase; Provisional

Probab=96.84  E-value=0.011  Score=50.79  Aligned_cols=81  Identities=26%  Similarity=0.300  Sum_probs=49.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|+++++|..+++.+...|++|+++.+ +.++.+.+    +..+... .+..+-.+. +.++......  ...+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDL-PEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999988754 33333222    3344332 222222221 1122222211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|.+.|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.013  Score=49.32  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=51.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEE-EeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++|+|++|++|..+++.+...|++|+++.++.++.+.+ ++++...+ .|..+.   +.++++.+... ..+|+++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~-~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP---ASLEEARGLFP-HHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH---HHHHHHHHHHh-hcCcEEEECC
Confidence            589999999999999999988899999999988776654 34443321 222222   22444443332 2589999986


Q ss_pred             C
Q 019196          227 G  227 (344)
Q Consensus       227 g  227 (344)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            5

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.83  E-value=0.0094  Score=51.45  Aligned_cols=106  Identities=18%  Similarity=0.194  Sum_probs=62.8

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCH------HHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA------EKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~------~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--  214 (344)
                      .+++++|+|++  +++|.+++..+...|++|+++.++.      +..+.+++.+.. ..+..+-.+ .+.+.++.+..  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHHH
Confidence            46789999985  7999999999988999998875432      222223222211 222222211 12233333221  


Q ss_pred             cCCCccEEEeCCChh--------h----------------------HHHHHhcccCCCEEEEEeccCC
Q 019196          215 KLKGVDVLYDPVGGK--------L----------------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       215 ~~~~~d~vid~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ..+++|++++|+|..        .                      .+.++..++++|+++.++...+
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            124699999998731        0                      1345556777899998876543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.017  Score=46.20  Aligned_cols=97  Identities=19%  Similarity=0.195  Sum_probs=61.8

Q ss_pred             hhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       125 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~-~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      ...|+....+...+.+...--.+++|||+|+ |. +|..++..++..|++|+++.++.++                    
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~--------------------   80 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKN--------------------   80 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchh--------------------
Confidence            3345544444444433322246889999999 76 5999999999999998888876321                    


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                         ..+.+     ..+|+||.|++.+.+ --...++++-.+++++.+.
T Consensus        81 ---l~~~l-----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          81 ---LKEHT-----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             ---HHHHH-----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence               11111     358999999987543 2223466666677776543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.83  E-value=0.014  Score=50.51  Aligned_cols=82  Identities=22%  Similarity=0.295  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..++..+...|++|+++.++.++.+.+    +..+... .+..+-.+. +.+++.....  ...+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDE-DGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhCCC
Confidence            467899999999999999988888999999999887765443    2334322 222222222 1122222221  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.013  Score=51.12  Aligned_cols=81  Identities=20%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.+ ++.. ..+..+-.+. +.+.+.....  ...++|.+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDR-AAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999888889999999998877665543 3321 2222222111 1122222211  12468999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++|+|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999874

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.82  E-value=0.025  Score=46.20  Aligned_cols=99  Identities=21%  Similarity=0.190  Sum_probs=59.8

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHhcCC
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ...++++++||.+|+ |. |..+..+++..  ..+|++++.++++    +..+...+ .+..+...   ...+.......
T Consensus        27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~---~~~l~~~~~~~   97 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEV---LNKIRERVGDD   97 (188)
T ss_pred             hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhH---HHHHHHHhCCC
Confidence            445689999999998 44 33444445443  3489999998754    11233211 12222222   33344445566


Q ss_pred             CccEEEe-CC----C-------------hhhHHHHHhcccCCCEEEEEe
Q 019196          218 GVDVLYD-PV----G-------------GKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid-~~----g-------------~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ++|+|+. ..    |             ...+..+.+.|+++|+++...
T Consensus        98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            8999995 22    2             124566789999999998754

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.82  E-value=0.022  Score=50.57  Aligned_cols=108  Identities=19%  Similarity=0.300  Sum_probs=71.4

Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHH----hcCCcEEEeCCCCC
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNES  202 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~  202 (344)
                      .+...++  +.+...++++++||.+|+ | .|..++.+++..+.  +|++++.+++..+.++    +.|.+.+.... .+
T Consensus        65 ~p~l~a~--ll~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD  139 (322)
T PRK13943         65 QPSLMAL--FMEWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GD  139 (322)
T ss_pred             cHHHHHH--HHHhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CC
Confidence            3444444  235667889999999997 4 69999999988763  6999999988665554    35654332221 11


Q ss_pred             chhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEE
Q 019196          203 VIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVI  247 (344)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  247 (344)
                      .    .+..  .....||+|+.+.+.. .....++.++++|+++..
T Consensus       140 ~----~~~~--~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        140 G----YYGV--PEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             h----hhcc--cccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            1    1110  1124699999988754 335678999999998764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.79  E-value=0.012  Score=50.55  Aligned_cols=81  Identities=22%  Similarity=0.330  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH----HHHHHHhcCCcE--EEeCCCCCc-hhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLKSLGVDH--VVDLSNESV-IPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~g~~~--v~~~~~~~~-~~~~~~~~~~~~~~~  218 (344)
                      .|+.|||+|+++|+|.+.++=...+|+++++.+.+.+    ..+..++.|..+  +.|.++.+- .+..+++.+..  +.
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~--G~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV--GD  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc--CC
Confidence            5889999999999998888777778999888887754    333444445222  233333222 22222333322  37


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++|++|-
T Consensus       115 V~ILVNNAGI  124 (300)
T KOG1201|consen  115 VDILVNNAGI  124 (300)
T ss_pred             ceEEEecccc
Confidence            9999999984

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.79  E-value=0.017  Score=49.35  Aligned_cols=81  Identities=23%  Similarity=0.265  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++++||+|++|++|..++..+...|++|++++++.++.+.+.    ..+.. ..+..+-.+ .+.+++..+..  ...+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999889999999998877655442    22322 222222222 12233332221  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|.+.+
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02253 xanthoxin dehydrogenase

Probab=96.76  E-value=0.011  Score=51.55  Aligned_cols=80  Identities=26%  Similarity=0.339  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC--c-EE--EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--D-HV--VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~-~v--~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.  . ..  .|..+.+.   +++.....  ...
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDD---VSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHH---HHHHHHHHHHHhC
Confidence            367899999999999999998888899999999876654433 33321  1 12  23333222   22222211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            69999999863

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.76  E-value=0.027  Score=47.04  Aligned_cols=106  Identities=20%  Similarity=0.291  Sum_probs=69.8

Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCCcE--EEeCCC
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDH--VVDLSN  200 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--v~~~~~  200 (344)
                      .+...++  +.+...++++++||-+|+  |.|..+..+++..+  .+|++++.+++-.+.+++    .|...  +...+.
T Consensus        61 ~p~~~~~--~~~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~  136 (212)
T PRK13942         61 AIHMVAI--MCELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG  136 (212)
T ss_pred             cHHHHHH--HHHHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc
Confidence            3444444  336677899999999996  67888888888765  589999999886666643    44322  222221


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEE
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  247 (344)
                      ...         ......||.|+-+... .......+.|+++|+++..
T Consensus       137 ~~~---------~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        137 TLG---------YEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             ccC---------CCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            111         0123579999765443 4446778999999998875

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.75  E-value=0.015  Score=50.71  Aligned_cols=92  Identities=26%  Similarity=0.353  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+++++|+|+ |++|.+++..+...| .+|+++.++.++.+.+. +++....+.. ..+.    .+     .-..+|+|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~~-----~~~~~DivI  190 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----QE-----ELADFDLII  190 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----hh-----ccccCCEEE
Confidence            4678999999 999999999999999 58999999988776553 3432110111 0010    00     114689999


Q ss_pred             eCCChhhH------HHHHhcccCCCEEEEEe
Q 019196          224 DPVGGKLT------KESLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~~~------~~~~~~l~~~G~~v~~g  248 (344)
                      +|++....      ......+++...++++-
T Consensus       191 naTp~g~~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        191 NATSAGMSGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             ECCcCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            99985432      11235566666666653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.75  E-value=0.012  Score=50.74  Aligned_cols=82  Identities=17%  Similarity=0.297  Sum_probs=50.9

Q ss_pred             CCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCH--HHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~--~g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .+++++|+|+  ++++|.++++.+...|++|++++++.  +..+.+ ++++.. ..+..+-.+. +.++++.+..  ...
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~g   84 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNE-EHLASLADRVREHVD   84 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999998  79999999998888999999988653  333333 334321 1222222221 2233333321  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        85 ~iD~li~nAG~   95 (256)
T PRK07889         85 GLDGVVHSIGF   95 (256)
T ss_pred             CCcEEEEcccc
Confidence            69999998863

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.74  E-value=0.015  Score=49.99  Aligned_cols=80  Identities=20%  Similarity=0.155  Sum_probs=51.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h----cCC--cEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGV--DHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~--~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      ++++||+|++|++|..++..+...|++|++++++.++.+... +    .+.  ...+..+-.+. +.+.......  ...
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE-QSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            468999999999999999999888999999998876554332 1    221  12222222221 1222222221  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|+++++.|
T Consensus        81 ~id~vv~~ag   90 (259)
T PRK12384         81 RVDLLVYNAG   90 (259)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.72  E-value=0.0056  Score=58.01  Aligned_cols=72  Identities=24%  Similarity=0.271  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +.++++|+|+|. |..|++++++++..|++|++++.++++.+.+++.|+..+ ....  .   ...+      ..+|+|+
T Consensus         9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~--~---~~~l------~~~D~VV   75 (488)
T PRK03369          9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD--A---VQQI------ADYALVV   75 (488)
T ss_pred             ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc--h---HhHh------hcCCEEE
Confidence            557889999999 999999999999999999999987776666777776432 2111  1   1111      3579999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      .+.|.
T Consensus        76 ~SpGi   80 (488)
T PRK03369         76 TSPGF   80 (488)
T ss_pred             ECCCC
Confidence            98885

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.72  E-value=0.018  Score=50.20  Aligned_cols=106  Identities=19%  Similarity=0.273  Sum_probs=65.7

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCH---HHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019196          145 SSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       145 ~~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      -.++++||+|++  +++|.++++.+...|++|+++.+++   ++.+.+ ++++....+..+-.+ .+.++++.+..  ..
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHhc
Confidence            356899999996  7999999999988999998887653   233333 344532223222222 22233333322  12


Q ss_pred             CCccEEEeCCChh---------------h---------------HHHHHhcccCCCEEEEEeccC
Q 019196          217 KGVDVLYDPVGGK---------------L---------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       217 ~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .++|++++++|..               .               .+.++..++.+|+++.++...
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~  151 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG  151 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence            4699999998621               0               133445677789998887654

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.022  Score=49.73  Aligned_cols=81  Identities=25%  Similarity=0.349  Sum_probs=51.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCC--c-EEEeCCCCCchhhHHHHHHH-hcCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D-HVVDLSNESVIPSVKEFLKA-RKLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~v~~~~~~~~~~~~~~~~~~-~~~~~  218 (344)
                      ++++||+|++|++|..++..+...|++|++++++.++.+...    ..+.  . ..+..+-.+. +.++.+... ....+
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHHHHHHHHhcCC
Confidence            567999999999999999998888999999998877654442    2221  1 2222222221 112221111 12246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++.|+|.
T Consensus        82 id~vv~~ag~   91 (280)
T PRK06914         82 IDLLVNNAGY   91 (280)
T ss_pred             eeEEEECCcc
Confidence            8999999874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.69  E-value=0.019  Score=49.68  Aligned_cols=81  Identities=20%  Similarity=0.220  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++  ++|.++++.+...|++|++..+++...+.+++    .+....+..+-.+ .+.++++....  ...
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhcC
Confidence            467899999975  89999999888899999988776321122222    2322223222222 22233333322  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|++++++|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6999999997

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.69  E-value=0.014  Score=51.90  Aligned_cols=89  Identities=25%  Similarity=0.274  Sum_probs=63.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+|.|+|. |.+|...+..++..|.  +|++.++++++.+.+++.|......   .+    ..+..     ...|+||.|
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~----~~~~~-----~~aDvViia   73 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS----AAEAV-----KGADLVILC   73 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC----HHHHh-----cCCCEEEEC
Confidence            57999998 9999999998888874  8999999998888888877532111   11    11111     368999999


Q ss_pred             CChhh----HHHHHhcccCCCEEEEEec
Q 019196          226 VGGKL----TKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~~----~~~~~~~l~~~G~~v~~g~  249 (344)
                      ++...    +......++++..++.++.
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            98643    3344456777777777664

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.69  E-value=0.025  Score=48.02  Aligned_cols=106  Identities=16%  Similarity=0.224  Sum_probs=67.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...+..+.++||-+|.  +.|..++.+++.+  +.+|+.++.+++..+.+++    .|...-+.....+..+.+..+...
T Consensus        62 ~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~  139 (234)
T PLN02781         62 MLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNN  139 (234)
T ss_pred             HHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhC
Confidence            4556667889999985  6677777777765  3599999999987776643    454322232223332212222111


Q ss_pred             hcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEE
Q 019196          214 RKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       214 ~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (344)
                      .....||+||.-...    ..++.+++.++++|.++.-
T Consensus       140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            113579999865542    4567888999999988763

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.039  Score=48.06  Aligned_cols=100  Identities=27%  Similarity=0.334  Sum_probs=61.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hcCCc-EEE--eCCCCCchhhHHHHHHHh-cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SLGVD-HVV--DLSNESVIPSVKEFLKAR-KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~-~v~--~~~~~~~~~~~~~~~~~~-~~~~  218 (344)
                      ++.++|.|+ |++|..++..+. .|++|++++++.++.+.+ +   ..+.. ..+  |..+.+.   +..+.+.. ...+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~---i~~~~~~~~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES---VKALAATAQTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHhcCC
Confidence            357899998 899999998885 799999999987665433 2   22322 122  3333222   23332221 1246


Q ss_pred             ccEEEeCCChh----h---------------HHHHHhcccCCCEEEEEeccC
Q 019196          219 VDVLYDPVGGK----L---------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       219 ~d~vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|++++++|..    .               ++.+...++++|+++.++...
T Consensus        77 id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         77 VTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             CCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            99999999841    1               233445566677777766443

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.02  Score=48.83  Aligned_cols=79  Identities=24%  Similarity=0.328  Sum_probs=50.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc----CCc-EEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL----GVD-HVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ++++|+|++|++|...++.+...|++|+++++++++.+.. +.+    +.. ..+..+-.+. +..++...... ..+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCCE
Confidence            4799999999999999999888899999999988765433 221    111 1222222221 22333333322 24799


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      ++.++|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9988763

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.012  Score=50.80  Aligned_cols=37  Identities=32%  Similarity=0.478  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~   44 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP   44 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence            4689999999999999999999889999999998754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.68  E-value=0.017  Score=49.44  Aligned_cols=82  Identities=26%  Similarity=0.319  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEE-EecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIA-VARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~-~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +++++||+|++|++|..++..+...|++|++ ..++.++.+.+    ++.+... .+..+-.+. +.+....+..  ...
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV-EKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4578999999999999999999989999876 45665544332    3334322 222222221 2233322211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.67  E-value=0.022  Score=50.70  Aligned_cols=79  Identities=25%  Similarity=0.356  Sum_probs=52.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHH-HhcCC---c-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFL-KSLGV---D-HVV--DLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~-~~~g~---~-~v~--~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      +++++|+|+++++|..++..+...| ++|++++++.++.+.+ ++++.   . ..+  |..+.+   .+++.....  ..
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~---~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLD---SVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHH---HHHHHHHHHHHhC
Confidence            5689999999999999998888889 8999999988766544 33321   1 122  222222   233332221  13


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|+++|.
T Consensus        80 ~~iD~lI~nAG~   91 (314)
T TIGR01289        80 RPLDALVCNAAV   91 (314)
T ss_pred             CCCCEEEECCCc
Confidence            469999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.67  E-value=0.02  Score=50.72  Aligned_cols=83  Identities=25%  Similarity=0.314  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~  219 (344)
                      .++++||+|+++++|...++.+...|++|++.+++. ++.+.    ++..|........+..-.+.+.++.+.. ...++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999888999999887643 22222    2233433222222222222233333221 13479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|+++|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999874

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.66  E-value=0.022  Score=45.74  Aligned_cols=80  Identities=24%  Similarity=0.277  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCC--cE-EEe--CCCCCchhh-HHHHHHHhcCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGV--DH-VVD--LSNESVIPS-VKEFLKARKLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~--~~-v~~--~~~~~~~~~-~~~~~~~~~~~~~  219 (344)
                      .+.++|.|+++++|.+.++.+...|++|.+.+.+.+.. +.++.++.  ++ .|.  .++....+. .++..+..  +..
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~--g~p   91 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL--GTP   91 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc--CCC
Confidence            34579999999999999999999999999998876643 34466764  22 232  222222111 22332222  378


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      ++++||.|-
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999994

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.65  E-value=0.058  Score=45.01  Aligned_cols=104  Identities=22%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH-------------------HHHHHHH----hcCCcEEEeCCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA-------------------EKIKFLK----SLGVDHVVDLSNE  201 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~-------------------~~~~~~~----~~g~~~v~~~~~~  201 (344)
                      ..++|+|.|. |++|.+++..+.+.|. +++.++.++                   .|.+.++    ......-+...+.
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            3568999999 9999999999999998 777665431                   1111111    1121111111111


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChhhHH-HHH-hcccCCCEEEEEeccCCC
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTK-ESL-KLLNWGAQILVIGFASGE  253 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~-~~~-~~l~~~G~~v~~g~~~~~  253 (344)
                      -+   -++-.......+||+|+||...-... .++ .+.+..=.+++.+..+++
T Consensus       108 f~---t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~k  158 (263)
T COG1179         108 FI---TEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGGK  158 (263)
T ss_pred             hh---CHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccCC
Confidence            11   11122222345899999999873332 233 344444466666655554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.65  E-value=0.019  Score=49.60  Aligned_cols=81  Identities=21%  Similarity=0.278  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH-Hh----cCCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KS----LGVD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|..++..+...|++|+++.+ +.++.+.. ++    .+.. ..+..+-.+. +.++++....  ..
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP-ETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhc
Confidence            4689999999999999999999889999988764 34433322 22    2322 2222222221 2233333221  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      ..+|++++++|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            46899999885

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=96.64  E-value=0.034  Score=47.35  Aligned_cols=104  Identities=15%  Similarity=0.231  Sum_probs=68.8

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..+....++||-+|  +.+|+.++.+++.+  +.+++.++.+++..+.++    +.|...-+.....+..+.+.++....
T Consensus        74 l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~  151 (247)
T PLN02589         74 LLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDG  151 (247)
T ss_pred             HHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhcc
Confidence            44455667899999  57899999898876  569999999988777664    45643333433344422233322111


Q ss_pred             -cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEE
Q 019196          215 -KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       215 -~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (344)
                       ....||+||-=...    ..++.+++++++||.++.
T Consensus       152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence             12479999855543    356788899999999876

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.64  E-value=0.026  Score=49.97  Aligned_cols=107  Identities=28%  Similarity=0.361  Sum_probs=69.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC----CcEEE-eCCCCCchhhHHHHHHH--hcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG----VDHVV-DLSNESVIPSVKEFLKA--RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g----~~~v~-~~~~~~~~~~~~~~~~~--~~~~  217 (344)
                      .+.+++|+|+++|+|..++..+...|++|+.++++.++.+.++ ++.    ...+. -.-+.+..+++..+...  ....
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            4579999999999999999999999999999999987666553 222    12211 11122222223333222  2345


Q ss_pred             CccEEEeCCChh------------------------hHHHHHhcccCC--CEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK------------------------LTKESLKLLNWG--AQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~~  252 (344)
                      +.|+.++++|--                        ....++..|+..  +|+|.++...+
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            799999988841                        124455555554  79999887554

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.014  Score=49.37  Aligned_cols=74  Identities=26%  Similarity=0.347  Sum_probs=48.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHH-HhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLK-ARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~-~~~~~~~d~vid  224 (344)
                      ++++||+|++|++|..+++.+...|++|+++.++.++     ..... ...|..+...   .++... .....++|++|.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQ---TAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHH---HHHHHHHHHHhCCCcEEEE
Confidence            5789999999999999999998899999999987654     11111 1223333221   222222 222236899999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      |.+.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            9874

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.024  Score=48.75  Aligned_cols=80  Identities=25%  Similarity=0.271  Sum_probs=51.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC--cEEEeCCCCCch---hhHHHHHHHhcCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHVVDLSNESVI---PSVKEFLKARKLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~---~~~~~~~~~~~~~~~d  220 (344)
                      ++++||+|++|++|..++..+...|++|++++++.++.+.+ +++..  -..+..+-.+..   ....++...  ..++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE--RGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH--cCCCC
Confidence            46899999999999999998888899999999988766544 33321  122222222221   112222221  23689


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.60  E-value=0.024  Score=49.25  Aligned_cols=71  Identities=28%  Similarity=0.341  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH-hcCCc----EEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVD----HVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~----~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      .++++++|+|+ ||.+.+++..+...|+ +++++.|+.+|.+.+. .++..    ......+...            ...
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~------------~~~  190 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG------------LEE  190 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc------------ccc
Confidence            35789999999 9999999999999996 8999999999877664 34311    1111111111            015


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|+++||++.
T Consensus       191 ~dliINaTp~  200 (283)
T COG0169         191 ADLLINATPV  200 (283)
T ss_pred             cCEEEECCCC
Confidence            8999999974

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.60  E-value=0.021  Score=52.52  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC-cEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+++++|+||+|++|.+.+..+...|++|+++++++++.+.. ...+. ...+..+-.+    .+++.+..  .++|+++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd----~~~v~~~l--~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ----EAALAELL--EKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC----HHHHHHHh--CCCCEEE
Confidence            367999999999999999998888999999999887655332 11111 1122222212    12222222  3699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus       251 nnAGi  255 (406)
T PRK07424        251 INHGI  255 (406)
T ss_pred             ECCCc
Confidence            98763

>PRK06398 aldose dehydrogenase; Validated

Probab=96.59  E-value=0.009  Score=51.52  Aligned_cols=74  Identities=24%  Similarity=0.288  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..++..+...|++|++++++.++..     . ...+  |..+..-   +.+..+..  ....+|+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~-~~~~~~D~~~~~~---i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----D-VDYFKVDVSNKEQ---VIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----c-eEEEEccCCCHHH---HHHHHHHHHHHcCCCCE
Confidence            3678999999999999999999999999999988754321     1 1122  3333221   23322221  1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      ++++.|.
T Consensus        76 li~~Ag~   82 (258)
T PRK06398         76 LVNNAGI   82 (258)
T ss_pred             EEECCCC
Confidence            9998873

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.59  E-value=0.02  Score=48.76  Aligned_cols=81  Identities=27%  Similarity=0.378  Sum_probs=50.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|++|++|..++..+...|++|+++ .++.++.+.+.    ..+... ++..+-.+. +.+.+.....  ...+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE-EDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            4689999999999999998888889999988 88766554332    222222 222222221 2233322211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (247)
T PRK05565         84 IDILVNNAGI   93 (247)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.58  E-value=0.023  Score=48.33  Aligned_cols=37  Identities=32%  Similarity=0.442  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .++++||+|++|++|..++..+...|++|+++.++.+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~   40 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE   40 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence            3568999999999999999999888999977776654

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.02  Score=48.03  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=50.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++||+|++|.+|..++..+... ++|++++++.++.+.+.+ ......+..+-.+. +.+.+.....  .+.|.+|.++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~vi~~a   79 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP-EAIAAAVEQL--GRLDVLVHNA   79 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH-HHHHHHHHhc--CCCCEEEECC
Confidence            57999999999999999877766 899999998876655542 22222332222222 2233333222  2699999998


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      |.
T Consensus        80 g~   81 (227)
T PRK08219         80 GV   81 (227)
T ss_pred             Cc
Confidence            74

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.57  E-value=0.051  Score=47.18  Aligned_cols=111  Identities=21%  Similarity=0.195  Sum_probs=72.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-c--C--CcEEEeCCC-CCchhhHHHHHHHhcCCC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L--G--VDHVVDLSN-ESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~--g--~~~v~~~~~-~~~~~~~~~~~~~~~~~~  218 (344)
                      -+++-|+|+|+.+++|..++.-+...|.+|++.+..++..+.++. .  +  -...+|..+ ++..+..+-+.+..+..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            356789999999999999999999999999999977665554432 1  1  112334333 333333333344456667


Q ss_pred             ccEEEeCCChh---------------------------hHHHHHhcccC-CCEEEEEeccCCCCC
Q 019196          219 VDVLYDPVGGK---------------------------LTKESLKLLNW-GAQILVIGFASGEIP  255 (344)
Q Consensus       219 ~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~~~  255 (344)
                      .--++|++|..                           .....+..+++ .||+|.++...+..+
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~  171 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA  171 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence            88899999821                           11333445554 699999998776543

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.55  E-value=0.033  Score=46.28  Aligned_cols=98  Identities=15%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHH----hcCCc---EEEeCCCCCchhhHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVD---HVVDLSNESVIPSVKE  209 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~  209 (344)
                      .+...++++++||-+|+  |.|..++.+++..+  .+|++++.+++-.+.++    ..+..   .+...+....   .  
T Consensus        65 ~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~--  137 (205)
T PRK13944         65 CELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L--  137 (205)
T ss_pred             HHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C--
Confidence            36667889999999986  66888888888764  58999999988665554    34432   2222222111   0  


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEE
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  247 (344)
                          .....||.|+-+... ...+.+.+.|+++|+++..
T Consensus       138 ----~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        138 ----EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ----ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                112479999877654 3346678999999999764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.54  E-value=0.015  Score=49.53  Aligned_cols=81  Identities=25%  Similarity=0.352  Sum_probs=48.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHH-HHH---HhcCCcEEE-eCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKI-KFL---KSLGVDHVV-DLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~-~~~---~~~g~~~v~-~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++.+||+|++|++|..+++.+...|++|++... +..+. +.+   +..+..... ..+-.+. +.+.+..+..  ...+
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW-DSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999887543 22222 222   233443322 2222221 1122222211  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.02  Score=49.43  Aligned_cols=106  Identities=20%  Similarity=0.303  Sum_probs=63.3

Q ss_pred             CCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEecC---HHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARG---AEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~--~g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+  ++++|.++++.+...|++|+++.+.   .++.+.+ ++++....+..+-.+. +.++++.+..  ..+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASD-EQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCH-HHHHHHHHHHHHHhC
Confidence            4678999996  5799999999988899999887543   3333333 3344322222222111 1233333222  124


Q ss_pred             CccEEEeCCChh----------------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK----------------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~----------------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                .               .+.++..++..|+++.++...+
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~  149 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  149 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc
Confidence            799999988630                0               1234456677799988876543

>TIGR02415 23BDH acetoin reductases

Probab=96.54  E-value=0.034  Score=47.65  Aligned_cols=80  Identities=23%  Similarity=0.239  Sum_probs=50.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      ++++|+|++|++|..+++.+...|++|+++.++.++.+.+    +..+... .+..+-.+ .+.+.+.....  ....+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            3699999999999999999988999999999887654433    2233221 22222111 11222322211  123689


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +++++.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.52  E-value=0.031  Score=47.87  Aligned_cols=80  Identities=21%  Similarity=0.305  Sum_probs=50.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcE-EEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      +++||+|++|++|..++..+...|++|++++++.++.+.+..    .+... .+..+-.+ .+.+..+.+..  ...+.|
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999988889999999998776654432    23221 12222111 11222222211  124689


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++|.+.+.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99988763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.52  E-value=0.038  Score=50.93  Aligned_cols=73  Identities=21%  Similarity=0.225  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+.+|||+|+ |++|.+++..+...|+ +++++.++.++.+.+ .+++...+..+         .+.....  ..+|+||
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---------~~l~~~l--~~aDiVI  247 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---------SELPQLI--KKADIII  247 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---------HHHHHHh--ccCCEEE
Confidence            5678999999 9999999999999997 799999998876555 45552222221         2222211  3589999


Q ss_pred             eCCChhh
Q 019196          224 DPVGGKL  230 (344)
Q Consensus       224 d~~g~~~  230 (344)
                      +|++.+.
T Consensus       248 ~aT~a~~  254 (414)
T PRK13940        248 AAVNVLE  254 (414)
T ss_pred             ECcCCCC
Confidence            9999753

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.51  E-value=0.029  Score=48.65  Aligned_cols=69  Identities=22%  Similarity=0.209  Sum_probs=49.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ....+++++|+|+ ||.+.+++..+...|+ +|+++.++.++.+.+. .++..    +.        ...    ....+|
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~--------~~~----~~~~~d  180 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WR--------PDL----GGIEAD  180 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----ch--------hhc----ccccCC
Confidence            3445678999999 9999999999999998 6999999988776553 44311    10        000    123589


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +|+||++.
T Consensus       181 lvINaTp~  188 (272)
T PRK12550        181 ILVNVTPI  188 (272)
T ss_pred             EEEECCcc
Confidence            99999874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.49  E-value=0.034  Score=50.18  Aligned_cols=83  Identities=22%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCeEEEEecCH--HH--------------HHHHHhcCCc-EEEeCCCCCchh
Q 019196          145 SSGQVLLVLGAAGGVGVA--AVQIGKVCGATIIAVARGA--EK--------------IKFLKSLGVD-HVVDLSNESVIP  205 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~--~~~~~~~~g~~v~~~~~~~--~~--------------~~~~~~~g~~-~v~~~~~~~~~~  205 (344)
                      ..++++||+|+++++|++  .++.+ ..|++++++....  .+              .+.+++.|.. ..+..+-.+. +
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~-E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD-E  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH-H
Confidence            456899999999999999  56677 7899988877322  11              2234555643 2333333222 1


Q ss_pred             hHHHHHHHh--cCCCccEEEeCCChh
Q 019196          206 SVKEFLKAR--KLKGVDVLYDPVGGK  229 (344)
Q Consensus       206 ~~~~~~~~~--~~~~~d~vid~~g~~  229 (344)
                      ...++....  ..+++|+++++++.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            223332221  124699999999864

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.038  Score=47.97  Aligned_cols=96  Identities=20%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             hccchHHHHHHHHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          126 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .+||........+ +..++ -.|++|+|+|.+.-+|.-++.++...|++|++..+....                     
T Consensus       137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~---------------------  194 (286)
T PRK14175        137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD---------------------  194 (286)
T ss_pred             CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh---------------------
Confidence            3566555555444 33333 368899999996669999999999999999988764211                     


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        +.+..     +.+|+||.++|.+.+-.. ++++++..++++|...
T Consensus       195 --l~~~~-----~~ADIVIsAvg~p~~i~~-~~vk~gavVIDvGi~~  233 (286)
T PRK14175        195 --MASYL-----KDADVIVSAVGKPGLVTK-DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             --HHHHH-----hhCCEEEECCCCCcccCH-HHcCCCcEEEEcCCCc
Confidence              11111     468999999998644222 5689998999988643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.49  E-value=0.031  Score=48.01  Aligned_cols=80  Identities=30%  Similarity=0.354  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .+++++|+|++|++|..+++.+...|++|+++.++.+ ..+.++..+... ..|..+...   +.+.....  ...++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQ---VKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHH---HHHHHHHHHHHcCCCCE
Confidence            3678999999999999999999889999988765433 333444333221 123333221   33332221  1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|+|+|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.48  E-value=0.036  Score=48.26  Aligned_cols=78  Identities=19%  Similarity=0.262  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      -.|++|+|+|.++-+|..++.++...|++|++..+..+.                       +.+.   +  ..+|++++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~-----------------------L~~~---~--~~aDIvI~  208 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN-----------------------LPEL---V--KQADIIVG  208 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh-----------------------HHHH---h--ccCCEEEE
Confidence            468899999994449999999999999987777652111                       1111   1  46899999


Q ss_pred             CCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          225 PVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|.+.+ --.++++++..++++|...
T Consensus       209 AtG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        209 AVGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             ccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            9986543 2236689999999988553

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.47  E-value=0.02  Score=44.87  Aligned_cols=83  Identities=27%  Similarity=0.287  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      ++-.-||.|+.+++|.+++..+...|+.+...+...++ .+.++++|-..++...+..-++.+.......  ..+..|+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            34456999999999999999999999999998876654 4567899988888765544434344443332  23468999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      +||.|.
T Consensus        88 vncagi   93 (260)
T KOG1199|consen   88 VNCAGI   93 (260)
T ss_pred             eeccce
Confidence            999995

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.47  E-value=0.025  Score=45.01  Aligned_cols=94  Identities=19%  Similarity=0.318  Sum_probs=61.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|++|.+|....+=|...|-+|++++++++|....+..   .+..-+-.+.    ..+..  .-.|+|+||++.+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd~----~~~a~--~l~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFDL----TSLAS--DLAGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccCh----hhhHh--hhcCCceEEEeccC
Confidence            578999999999999999999999999999999877543221   1111111111    11111  12589999999875


Q ss_pred             h----------hHHHHHhcccCCC--EEEEEeccC
Q 019196          229 K----------LTKESLKLLNWGA--QILVIGFAS  251 (344)
Q Consensus       229 ~----------~~~~~~~~l~~~G--~~v~~g~~~  251 (344)
                      .          ..+..+..++.-|  |+..+|..+
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            2          1234556666644  777777544

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.47  E-value=0.13  Score=38.48  Aligned_cols=99  Identities=20%  Similarity=0.407  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHH----hcCCc--EEEeCCCCCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~  212 (344)
                      ....+.++++|+-+|+  |.|..+..+++.. +.++++++.++...+.++    .++..  .++..+....   ..    
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~----   83 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LE----   83 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Ch----
Confidence            4556677889999997  4499999999876 469999999988776664    33332  1221111111   00    


Q ss_pred             HhcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      . ....||+|+...+.    +.++.+.+.|+++|.++...
T Consensus        84 ~-~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        84 D-SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             h-hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            0 12479999976543    35678889999999998753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.46  E-value=0.027  Score=48.73  Aligned_cols=81  Identities=22%  Similarity=0.284  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h----cCC---cEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGV---DHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~---~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      -+++..|+|++.++|.+-+.=+...|.+|+.+.|+.+|++..+ +    .+.   ..++|+.+.+.  .-+.+.+...+-
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~--~ye~i~~~l~~~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE--VYEKLLEKLAGL  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch--hHHHHHHHhcCC
Confidence            4689999999999998777555558999999999999987663 2    231   23556655542  235566666667


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      .+-+.+||+|-
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            78889999984

>PRK05855 short chain dehydrogenase; Validated

Probab=96.46  E-value=0.029  Score=54.38  Aligned_cols=82  Identities=18%  Similarity=0.249  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+    +..|.. ..+..+-.+. +.+.++....  ..++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDA-DAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHhcCC
Confidence            357899999999999999999988999999999987765543    223432 2222222221 1233333221  2246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|+|.
T Consensus       393 id~lv~~Ag~  402 (582)
T PRK05855        393 PDIVVNNAGI  402 (582)
T ss_pred             CcEEEECCcc
Confidence            9999999874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.45  E-value=0.042  Score=47.01  Aligned_cols=80  Identities=18%  Similarity=0.201  Sum_probs=48.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHH---hcCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKA---RKLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~---~~~~~~d  220 (344)
                      ++++||+|++|++|..++..+...|++|+++.+ +.++.+.+ .+++.. ..+..+-.+. +.+.++.+.   ..+.++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDR-EQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHhCCCCe
Confidence            568999999999999999998888999987654 34443333 334322 1222221111 112222221   1233499


Q ss_pred             EEEeCCC
Q 019196          221 VLYDPVG  227 (344)
Q Consensus       221 ~vid~~g  227 (344)
                      ++|++.+
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.44  E-value=0.096  Score=43.26  Aligned_cols=79  Identities=23%  Similarity=0.276  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|.|. |.+|..+++.+...|++|++++++.++.+.+++ +++. .++.  .+.           ....+|+++.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~--~~l-----------~~~~~Dv~vp   91 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAP--EEI-----------YSVDADVFAP   91 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcc--hhh-----------ccccCCEEEe
Confidence            4679999999 999999999999999999999998887776644 4643 2222  111           1125888887


Q ss_pred             CCChh-hHHHHHhccc
Q 019196          225 PVGGK-LTKESLKLLN  239 (344)
Q Consensus       225 ~~g~~-~~~~~~~~l~  239 (344)
                      |+... .....+..++
T Consensus        92 ~A~~~~I~~~~~~~l~  107 (200)
T cd01075          92 CALGGVINDDTIPQLK  107 (200)
T ss_pred             cccccccCHHHHHHcC
Confidence            76543 3344445554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.43  E-value=0.1  Score=43.61  Aligned_cols=102  Identities=22%  Similarity=0.304  Sum_probs=62.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEE---------eCCCCCchhhHHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVV---------DLSNESVIPSVKEFLKA  213 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~---------~~~~~~~~~~~~~~~~~  213 (344)
                      +.++.+||+.|+  |.|.-+..+|+ .|.+|++++.++.-.+.+ ++.+.....         ......+  ...++...
T Consensus        32 ~~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~D~~~~  106 (213)
T TIGR03840        32 LPAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEI--FCGDFFAL  106 (213)
T ss_pred             CCCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEE--EEccCCCC
Confidence            356779999997  66887777775 699999999999877764 333321000         0000000  00001100


Q ss_pred             h--cCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEecc
Q 019196          214 R--KLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       214 ~--~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .  ....||.|+|+..-         ..+..+.++|+|+|+++..+..
T Consensus       107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence            1  12369999997541         2457788999999987777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK05599 hypothetical protein; Provisional

Probab=96.43  E-value=0.03  Score=47.88  Aligned_cols=78  Identities=18%  Similarity=0.302  Sum_probs=49.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc--EEEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD--HVVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~--~v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      +++|+|+++++|...+..+. .|++|+++.++.++.+.+    ++.|.+  ..+..+-.+. +.++++....  ..+++|
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDL-DTHRELVKQTQELAGEIS   79 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCH-HHHHHHHHHHHHhcCCCC
Confidence            68999999999999998776 599999999988776544    233422  2232222221 1123222221  124699


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +++++.|.
T Consensus        80 ~lv~nag~   87 (246)
T PRK05599         80 LAVVAFGI   87 (246)
T ss_pred             EEEEecCc
Confidence            99998874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=96.42  E-value=0.12  Score=43.27  Aligned_cols=91  Identities=10%  Similarity=0.062  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+.+|||+|| |.++.-=+..+...|++|++++..-. +...+.+.|.-...   ...+.  ...+      .++++||-
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~---~r~~~--~~dl------~g~~LVia   91 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLI---KGNYD--KEFI------KDKHLIVI   91 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEE---eCCCC--hHHh------CCCcEEEE
Confidence            4679999999 99998877777778999999876532 23323233322222   22221  1111      47999999


Q ss_pred             CCChhhHHHHH-hcccCCCEEEEEe
Q 019196          225 PVGGKLTKESL-KLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~~~~~~~-~~l~~~G~~v~~g  248 (344)
                      |++.+.++..+ ...+..+.++...
T Consensus        92 ATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         92 ATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             CCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            99987665544 4444556666654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.42  E-value=0.092  Score=38.98  Aligned_cols=91  Identities=19%  Similarity=0.267  Sum_probs=63.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (344)
                      |+|.|. |.+|..+++.++..+.+|++++.++++.+.+++.|.. ++..+..+     .+.++..+-..++.++-+++.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~-----~~~l~~a~i~~a~~vv~~~~~d   73 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATD-----PEVLERAGIEKADAVVILTDDD   73 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTS-----HHHHHHTTGGCESEEEEESSSH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchh-----hhHHhhcCccccCEEEEccCCH
Confidence            678899 9999999999999666999999999999999888854 44444333     2334444456789999888764


Q ss_pred             hH----HHHHhcccCCCEEEEE
Q 019196          230 LT----KESLKLLNWGAQILVI  247 (344)
Q Consensus       230 ~~----~~~~~~l~~~G~~v~~  247 (344)
                      ..    ...++.+.+..+++..
T Consensus        74 ~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   74 EENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCeEEEE
Confidence            32    2334555566666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.42  E-value=0.025  Score=49.43  Aligned_cols=86  Identities=17%  Similarity=0.157  Sum_probs=59.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|. |.+|...+..++..|.+|++.++++++.+.+++.|.....   ..+    .+ .     -...|+||.|+..
T Consensus         2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~----~~-~-----~~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STD----LS-L-----LKDCDLVILALPI   67 (279)
T ss_pred             eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCC----Hh-H-----hcCCCEEEEcCCH
Confidence            5889998 9999999988888899999999999888888877642111   111    11 1     1468999999986


Q ss_pred             hhH----HHHHhcccCCCEEEEEe
Q 019196          229 KLT----KESLKLLNWGAQILVIG  248 (344)
Q Consensus       229 ~~~----~~~~~~l~~~G~~v~~g  248 (344)
                      ...    ......++++-.+..++
T Consensus        68 ~~~~~~~~~l~~~l~~~~ii~d~~   91 (279)
T PRK07417         68 GLLLPPSEQLIPALPPEAIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHHhCCCCcEEEeCc
Confidence            433    44445556665565555

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.41  E-value=0.027  Score=48.30  Aligned_cols=34  Identities=24%  Similarity=0.333  Sum_probs=30.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +++||+|++|++|..++..+...|++|++++++.
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence            5799999999999999999988999999988754

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.41  E-value=0.045  Score=47.90  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=36.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      .+++|+|+|+ |+.|.+++..+...|+ +|+++.++.+|.+.+
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4578999999 9999999999999998 799999998876655

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.052  Score=46.52  Aligned_cols=38  Identities=32%  Similarity=0.359  Sum_probs=31.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKI  184 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~  184 (344)
                      +.+++|+|++|++|..+++.+...|++|++. .++.++.
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~   44 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA   44 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            5789999999999999999888889998775 5665544

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.03  Score=47.70  Aligned_cols=35  Identities=26%  Similarity=0.340  Sum_probs=31.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      ++||+|++|++|..+++.+...|++|++++++.++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            69999999999999999988889999999887653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.36  E-value=0.025  Score=48.58  Aligned_cols=77  Identities=21%  Similarity=0.187  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC-cEEE--eCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVV--DLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~--~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+.+|||+|++|.+|..++..+...|++|+++.++.++.......+. -.++  |..+  .   ...+.+.. +.++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~---~~~l~~~~-~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G---SDKLVEAI-GDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCC--C---HHHHHHHh-hcCCCEE
Confidence            35689999999999999998888889999999988776443321111 1222  3322  1   12222222 1369999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |.+.|.
T Consensus        90 i~~~g~   95 (251)
T PLN00141         90 ICATGF   95 (251)
T ss_pred             EECCCC
Confidence            998764

>PRK07574 formate dehydrogenase; Provisional

Probab=96.35  E-value=0.065  Score=48.84  Aligned_cols=88  Identities=18%  Similarity=0.198  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++....+..+.+|...   +.  +    .+++.     ...|+|+.+
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~---~~--~----l~ell-----~~aDvV~l~  255 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY---HV--S----FDSLV-----SVCDVVTIH  255 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee---cC--C----HHHHh-----hcCCEEEEc
Confidence            4679999999 99999999999999999999998753333344455321   11  1    33332     357999999


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++. +    .+ ...+..|+++..+|.++
T Consensus       256 lPlt~~T~~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        256 CPLHPETEHLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             CCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence            874 1    23 56789999998888776

>PLN03139 formate dehydrogenase; Provisional

Probab=96.35  E-value=0.052  Score=49.45  Aligned_cols=88  Identities=20%  Similarity=0.203  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++.+|++|++.+++....+..++.|+..+     .+    ++++.     ...|+|+.+
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell-----~~sDvV~l~  262 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----ED----LDAML-----PKCDVVVIN  262 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CC----HHHHH-----hhCCEEEEe
Confidence            4779999999 999999999999999999998876543344445553211     11    33333     247999998


Q ss_pred             CCh-----hhH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-----KLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-----~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++.     ..+ ...+..|+++..+|.++
T Consensus       263 lPlt~~T~~li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        263 TPLTEKTRGMFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             CCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence            874     123 45889999998888776

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.35  E-value=0.051  Score=46.83  Aligned_cols=82  Identities=20%  Similarity=0.257  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHH----HHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKF----LKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~----~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++.++.+ ....    ++..+... .+..+-.+. +.+.++....  ...
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g   84 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVE-SDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999888777432 2222    22233221 222222221 1233322211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        85 ~id~lv~~ag~   95 (261)
T PRK08936         85 TLDVMINNAGI   95 (261)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.34  E-value=0.035  Score=47.16  Aligned_cols=81  Identities=27%  Similarity=0.381  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +.+++||+|++|.+|..++..+...|++|+++.++.++ .+..    +..+.. ..+..+-.+ .+.+.+.....  ...
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHcC
Confidence            34689999999999999999998899998776665442 2222    222322 122222111 12233322211  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|.+|+++|
T Consensus        84 ~id~vi~~ag   93 (249)
T PRK12825         84 RIDILVNNAG   93 (249)
T ss_pred             CCCEEEECCc
Confidence            7999999987

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.042  Score=47.25  Aligned_cols=82  Identities=17%  Similarity=0.170  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH-H---hcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL-K---SLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~-~---~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++.+. .++.+.+ +   ..+... .+..+-.+. +.+.+.....  ...
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~~~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADE-AEVRALVARASAALG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999999999999999888899998877654 3333322 2   223321 222222221 1233332221  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|.|.|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            69999999873

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.33  E-value=0.041  Score=46.92  Aligned_cols=82  Identities=24%  Similarity=0.312  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|+++.+ ++++.+..    +..+... .+..+-.+. +.+.+..+..  ...
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   83 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV-EDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            3679999999999999999988888999887654 33433222    2233222 222222221 2223222221  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      .+|++|.|+|.
T Consensus        84 ~id~vi~~ag~   94 (247)
T PRK12935         84 KVDILVNNAGI   94 (247)
T ss_pred             CCCEEEECCCC
Confidence            58999999874

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=96.31  E-value=0.22  Score=41.27  Aligned_cols=104  Identities=22%  Similarity=0.301  Sum_probs=66.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC----cEE-E-eCCC---CCchhhHHHHHHHhcCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV----DHV-V-DLSN---ESVIPSVKEFLKARKLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~----~~v-~-~~~~---~~~~~~~~~~~~~~~~~  217 (344)
                      |++++++|+.|++|+.....+-..|+++.++..+.|..+...+|.+    ..+ + .++-   .+..+..+++...  -+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~--fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT--FG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH--hC
Confidence            7899999999999999998888889999999988887665555431    111 1 1221   2222223333332  24


Q ss_pred             CccEEEeCCCh---hh---------------HHHHHhc-----ccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGG---KL---------------TKESLKL-----LNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~---~~---------------~~~~~~~-----l~~~G~~v~~g~~~~  252 (344)
                      -.|+.+|..|-   ..               ...++..     -.++|.+|-++...+
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            58999998884   11               1223333     336899999886654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.31  E-value=0.096  Score=44.55  Aligned_cols=172  Identities=23%  Similarity=0.269  Sum_probs=99.0

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHH----HHH-HhcCCcEEEeCCCCCchhhHHHHHHH---hcCCCccEEEeCCCh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKI----KFL-KSLGVDHVVDLSNESVIPSVKEFLKA---RKLKGVDVLYDPVGG  228 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~----~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~---~~~~~~d~vid~~g~  228 (344)
                      +++|.++++.+...|++|+++.++.++.    +.+ ++.+.. ++..+-.+. +.++++...   ..++++|+++++.+.
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~-~~v~~~~~~~~~~~~g~iD~lV~~a~~   83 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDE-ESVEALFDEAVERFGGRIDILVNNAGI   83 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSH-HHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcch-HHHHHHHHHHHhhcCCCeEEEEecccc
Confidence            8999999999999999999999999873    222 345643 555444332 223333222   222679999987642


Q ss_pred             --h----------------------------hHHHHHhcccCCCEEEEEeccCCCCCCcch-h-----------------
Q 019196          229 --K----------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPA-N-----------------  260 (344)
Q Consensus       229 --~----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~-----------------  260 (344)
                        .                            ..+.+...++++|.++.++........... .                 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~  163 (241)
T PF13561_consen   84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAK  163 (241)
T ss_dssp             CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHH
Confidence              1                            124455688889999998866432221111 1                 


Q ss_pred             hhhc-cceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCC---cceeEEEEec
Q 019196          261 IALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIGKVMIAFD  335 (344)
Q Consensus       261 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~---~~gkvvi~~~  335 (344)
                      ++-. +++++.....+.......... ...++..+.+.+   ..+.......+|+.++...|.+..   ..| .+|.+|
T Consensus       164 el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~a~~itG-~~i~vD  237 (241)
T PF13561_consen  164 ELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDAASYITG-QVIPVD  237 (241)
T ss_dssp             HHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGGGTTGTS-EEEEES
T ss_pred             HhccccCeeeeeecccceeccchhcc-ccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCccccCccC-CeEEEC
Confidence            1245 689998888766542211111 011222222221   122333357889999998888644   344 444444

...

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.26  E-value=0.056  Score=45.85  Aligned_cols=80  Identities=30%  Similarity=0.362  Sum_probs=47.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH-Hh---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KS---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++||+|++|++|..++..+...|++++++.+ +.++.+.. .+   .+.. ..+..+-.+. +.+.+..+..  ....+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF-ESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHcCCC
Confidence            46899999999999999999889999998887 44433322 22   2221 1222222221 1122222211  12468


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |.+|++.|.
T Consensus        80 d~vi~~ag~   88 (242)
T TIGR01829        80 DVLVNNAGI   88 (242)
T ss_pred             cEEEECCCC
Confidence            999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.26  E-value=0.072  Score=44.11  Aligned_cols=107  Identities=22%  Similarity=0.285  Sum_probs=77.2

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      .++...++++-+|.-.|.++++..++-..+.+|+.++.+.+-.+..    +..|.++-++.-.....+.+.++.......
T Consensus        69 i~~~~ak~~lelGvfTGySaL~~Alalp~dGrv~a~eid~~~~~~~~~~~k~agv~~KI~~i~g~a~esLd~l~~~~~~~  148 (237)
T KOG1663|consen   69 IRLLNAKRTLELGVFTGYSALAVALALPEDGRVVAIEIDADAYEIGLELVKLAGVDHKITFIEGPALESLDELLADGESG  148 (237)
T ss_pred             HHHhCCceEEEEecccCHHHHHHHHhcCCCceEEEEecChHHHHHhHHHHHhccccceeeeeecchhhhHHHHHhcCCCC
Confidence            3445668899999877666666666655688999999988754444    456777777776666666677777766667


Q ss_pred             CccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          218 GVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .||.+|-=.--    ..++.+++++++||.++.=.
T Consensus       149 tfDfaFvDadK~nY~~y~e~~l~Llr~GGvi~~DN  183 (237)
T KOG1663|consen  149 TFDFAFVDADKDNYSNYYERLLRLLRVGGVIVVDN  183 (237)
T ss_pred             ceeEEEEccchHHHHHHHHHHHhhcccccEEEEec
Confidence            89999854432    35688999999999887643

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.25  E-value=0.014  Score=45.86  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=59.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC-----CCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL-----SNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~-----~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      |+|+|+ |++|...+..++..|.+|..+.+++ +.+..++.|.......     .........     ......+|++|-
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            689999 9999999999988999999999987 7777776653211111     000000001     012357999999


Q ss_pred             CCChhh----HHHHHhcccCCCEEEEEec
Q 019196          225 PVGGKL----TKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~~----~~~~~~~l~~~G~~v~~g~  249 (344)
                      |+-...    ++.+...+.++..++.+..
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence            997633    3445566677777777654

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.25  E-value=0.045  Score=43.06  Aligned_cols=93  Identities=26%  Similarity=0.338  Sum_probs=60.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ..+.+++|.|+ |.+|...++.+...| .+|++.+++.++.+.+ ++++... .....  +.    .+.     -.++|+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~~----~~~-----~~~~Dv   84 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--DL----EEL-----LAEADL   84 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--ch----hhc-----cccCCE
Confidence            34678999999 999999999988886 6899999988776554 4555321 01111  11    111     257999


Q ss_pred             EEeCCChhhH-----HHHHhcccCCCEEEEEec
Q 019196          222 LYDPVGGKLT-----KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       222 vid~~g~~~~-----~~~~~~l~~~G~~v~~g~  249 (344)
                      |++|++....     ......++++..++.++.
T Consensus        85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9999986442     111234566666766643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02366 spermidine synthase

Probab=96.24  E-value=0.054  Score=47.83  Aligned_cols=97  Identities=20%  Similarity=0.169  Sum_probs=60.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc-CC------cEEEeCCCCCchhhHHHHHHHhcC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-GV------DHVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~-g~------~~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      ...++||++|+ |. |.++..++++.+. +|++++.+++-.+.+++. ..      +.-+.....+    ..+..+....
T Consensus        90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~D----a~~~l~~~~~  163 (308)
T PLN02366         90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGD----GVEFLKNAPE  163 (308)
T ss_pred             CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEECh----HHHHHhhccC
Confidence            45678999997 33 6677788887664 799999888767777653 21      1001111111    2223333334


Q ss_pred             CCccEEEeCCCh-----------hhHHHHHhcccCCCEEEEE
Q 019196          217 KGVDVLYDPVGG-----------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       217 ~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  247 (344)
                      +.||+||.-...           +.++.+.+.|+++|.++.-
T Consensus       164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            579999853322           2457788999999999753

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.23  E-value=0.055  Score=46.17  Aligned_cols=44  Identities=34%  Similarity=0.499  Sum_probs=37.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      ..+++++||.|++|++|...++.+...|++|++++++.++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~   52 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAV   52 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence            44688999999999999999988888899999999987765433

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.23  E-value=0.031  Score=51.41  Aligned_cols=104  Identities=25%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH-------HHHhcCCcEEE--eCCCCCchhhHHHHHHHh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-------FLKSLGVDHVV--DLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-------~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~  214 (344)
                      -..+.+|||+|++|.+|..++..+...|++|++++++.++..       .........++  |..+.+.   +.+..+..
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~---l~~~~~~~  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADS---LRKVLFSE  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHH---HHHHHHHh
Confidence            345679999999999999999998888999999998865321       11112212222  3333221   33333221


Q ss_pred             cCCCccEEEeCCChh------h-------HHHHHhcccCC--CEEEEEeccC
Q 019196          215 KLKGVDVLYDPVGGK------L-------TKESLKLLNWG--AQILVIGFAS  251 (344)
Q Consensus       215 ~~~~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~  251 (344)
                       +.++|+||+|++..      .       ...+++.++..  ++++.++...
T Consensus       134 -~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~  184 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC  184 (390)
T ss_pred             -CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence             12699999998631      1       12334444333  4788877543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.22  E-value=0.03  Score=50.63  Aligned_cols=78  Identities=15%  Similarity=0.028  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC--CcE-EEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG--VDH-VVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g--~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+++|||+|++|.+|..+++.+...|.+|++++++....... +.++  ... .+..+-.+    .+.+.......++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD----AAKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC----HHHHHHHHhhcCCCE
Confidence            357899999999999999999988999999998776533222 2222  111 12222111    222333333336899


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      ||++++
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.044  Score=54.13  Aligned_cols=81  Identities=28%  Similarity=0.347  Sum_probs=52.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++++|+|++|++|..++..+...|++|+++++++++.+.+.    ..+... ++..+-.+. +.+++..+..  ...++
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDS-AAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcCCC
Confidence            578999999999999999988888999999999887655442    223222 222221111 1223322211  12369


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus       450 d~li~~Ag~  458 (657)
T PRK07201        450 DYLVNNAGR  458 (657)
T ss_pred             CEEEECCCC
Confidence            999999873

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.20  E-value=0.025  Score=49.66  Aligned_cols=94  Identities=14%  Similarity=0.169  Sum_probs=61.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc----CCcE-EEeCCCCCchhhHHHHHHHhcCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL----GVDH-VVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ..++++||-+|+ |. |.++..+++ .|+ +|++++.++...+.+++.    +... +..... +.       .. ....
T Consensus       157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~-------~~-~~~~  224 (288)
T TIGR00406       157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YL-------EQ-PIEG  224 (288)
T ss_pred             cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-cc-------cc-ccCC
Confidence            457889999997 44 887777666 465 899999998877766542    2211 111110 00       00 1234


Q ss_pred             CccEEEeCCChh----hHHHHHhcccCCCEEEEEec
Q 019196          218 GVDVLYDPVGGK----LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       218 ~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  249 (344)
                      +||+|+.+....    .+..+.+.|+|+|.++..|.
T Consensus       225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            799999765442    45667899999999988663

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.18  E-value=0.12  Score=43.59  Aligned_cols=104  Identities=19%  Similarity=0.305  Sum_probs=69.8

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ......+|.+||=+|  +|+|-.+..+++..| ++|++++.+++-++.+++    .|... +.+-..+    .+++-  -
T Consensus        45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d----Ae~LP--f  115 (238)
T COG2226          45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD----AENLP--F  115 (238)
T ss_pred             HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec----hhhCC--C
Confidence            344556889988777  578999999999886 489999999987776653    22221 1110101    11110  1


Q ss_pred             cCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEeccCC
Q 019196          215 KLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       215 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ....||++..+.|-       ..+.++.+.|+|+|+++.+.....
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p  160 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP  160 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence            34568999877663       356888899999999999876654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.17  E-value=0.054  Score=46.23  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=47.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      +++||+|++|++|..+++.+...|++|+++. ++.++.+..    +..+... .+..+-.+. ..+.+..+..  ...++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE-ADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH-HHHHHHHHHHHHhcCCC
Confidence            5799999999999999999988899987765 444433322    2233222 222222222 1122222211  12468


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|.|+|
T Consensus        82 d~li~~ag   89 (248)
T PRK06947         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCc
Confidence            99999987

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.043  Score=47.18  Aligned_cols=82  Identities=18%  Similarity=0.285  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH----HHHHH----HHhcCCcE-EEeCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKF----LKSLGVDH-VVDLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~----~~~~~----~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--  214 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.    ++.+.    ++..+... .+..+-.+ .+.+.+.....  
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDAKA   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHHHH
Confidence            357899999999999999999988899977665432    22221    12234322 22222221 12233333221  


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                      ...++|++|+++|.
T Consensus        86 ~~~~id~li~~ag~   99 (257)
T PRK12744         86 AFGRPDIAINTVGK   99 (257)
T ss_pred             hhCCCCEEEECCcc
Confidence            12468999999884

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.17  E-value=0.056  Score=45.96  Aligned_cols=78  Identities=22%  Similarity=0.278  Sum_probs=48.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +++||+|++|++|...+..+...|++|+++ .++.++.+..    +..+.. ..+  |..+.+   .+++..+..  ...
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDEN---QVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHH---HHHHHHHHHHHhCC
Confidence            479999999999999999888889998764 4555543322    223322 222  232222   233333322  245


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+++.++|.
T Consensus        79 ~id~vi~~ag~   89 (247)
T PRK09730         79 PLAALVNNAGI   89 (247)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.16  E-value=0.07  Score=43.51  Aligned_cols=95  Identities=25%  Similarity=0.415  Sum_probs=61.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      +.++.+||-+|+  |.|..+..+++. .+++|++++.+++..+.++    +.+.+. +.....+.    .+.   .....
T Consensus        43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~----~~~---~~~~~  112 (187)
T PRK00107         43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRA----EEF---GQEEK  112 (187)
T ss_pred             cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccH----hhC---CCCCC
Confidence            456889999986  456666666654 4679999999988666664    344432 22211111    111   12347


Q ss_pred             ccEEEeCCCh---hhHHHHHhcccCCCEEEEEe
Q 019196          219 VDVLYDPVGG---KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       219 ~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ||+|+-....   ..+..+.++++++|+++.+-
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            9999964322   45577889999999999873

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.16  E-value=0.034  Score=51.86  Aligned_cols=87  Identities=22%  Similarity=0.274  Sum_probs=59.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|.|+||.|.+|.+.+..++..|.+|+++++++++. +.++++|... .  .  +.    .+.     -..+|+||-|++
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~--~--~~----~e~-----~~~aDvVIlavp   67 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-A--N--DN----IDA-----AKDADIVIISVP   67 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-c--c--CH----HHH-----hccCCEEEEecC
Confidence            589999779999999999999999999999987764 4556676521 1  1  11    111     135788888887


Q ss_pred             hhh----HHHHHhcccCCCEEEEEec
Q 019196          228 GKL----TKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       228 ~~~----~~~~~~~l~~~G~~v~~g~  249 (344)
                      ...    +......++++..++.++.
T Consensus        68 ~~~~~~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         68 INVTEDVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEEccc
Confidence            643    3344455666777777764

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.16  E-value=0.09  Score=43.98  Aligned_cols=98  Identities=21%  Similarity=0.348  Sum_probs=65.0

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHH----hcCCcE--EEeCCCCCchhhHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDH--VVDLSNESVIPSVKEF  210 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~  210 (344)
                      .+...++++++||-+|+  |.|..++.+++..+.  +|++++.+++-.+.++    ++|.+.  ++..+....   .   
T Consensus        70 ~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~---~---  141 (215)
T TIGR00080        70 TELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG---W---  141 (215)
T ss_pred             HHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC---C---
Confidence            35667889999999985  668888888887653  6999999988766664    344332  121111111   0   


Q ss_pred             HHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEE
Q 019196          211 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  247 (344)
                         .....||+|+-+... .......+.|+++|+++..
T Consensus       142 ---~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 ---EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ---cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence               112479998855443 3446678999999998874

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK07578 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.057  Score=44.40  Aligned_cols=87  Identities=22%  Similarity=0.275  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      ++||.|+++++|..++..+... ++|++++++.+          ....|..+.+.   .++..+..  .++|+++++.|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~---~~~~~~~~--~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPAS---IRALFEKV--GKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHH---HHHHHHhc--CCCCEEEECCCC
Confidence            6899999999999988877766 89999887643          12234444332   33443332  368999998873


Q ss_pred             h-----------h---------------HHHHHhcccCCCEEEEEeccC
Q 019196          229 K-----------L---------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       229 ~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .           .               .+.+...+++.|+++.++...
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~  114 (199)
T PRK07578         66 VHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL  114 (199)
T ss_pred             CCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence            1           0               123334566778888877544

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.058  Score=46.01  Aligned_cols=81  Identities=20%  Similarity=0.304  Sum_probs=48.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|++|++|..+++.+...|++|+... +++++.+..    +..+... .+..+-.+ .+.+.++....  ....
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhCC
Confidence            46799999999999999988888899887765 344433322    3334322 22222111 12233332221  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++|.|.
T Consensus        81 id~li~~ag~   90 (248)
T PRK06123         81 LDALVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.13  E-value=0.078  Score=47.58  Aligned_cols=86  Identities=26%  Similarity=0.331  Sum_probs=62.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++.+.. .....+..    ..  +    ..++.     ...|+|+.+
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~----~~--~----l~ell-----~~aDiV~l~  211 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAE----YR--P----LEELL-----RESDFVSLH  211 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCE----ec--C----HHHHH-----hhCCEEEEe
Confidence            4789999999 9999999999999999999998875432 23344431    11  1    23332     247999999


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++. +    .+ ...+..|+++..++.++
T Consensus       212 lP~t~~T~~~i~~~~~~~mk~ga~lIN~a  240 (333)
T PRK13243        212 VPLTKETYHMINEERLKLMKPTAILVNTA  240 (333)
T ss_pred             CCCChHHhhccCHHHHhcCCCCeEEEECc
Confidence            874 1    22 56789999999888876

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.11  E-value=0.026  Score=48.78  Aligned_cols=77  Identities=21%  Similarity=0.302  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.   ... ..+..+-.+. +.++++....  ....+|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENY-QFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---Cce-EEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999999899999999887654321   111 1222222111 1233332221  124689999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +|+|
T Consensus        83 ~~Ag   86 (266)
T PRK06171         83 NNAG   86 (266)
T ss_pred             ECCc
Confidence            9987

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.11  E-value=0.28  Score=39.74  Aligned_cols=38  Identities=21%  Similarity=0.295  Sum_probs=32.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      +|.|+|+ |.+|...++++...|++|.+.+.+++..+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            5889999 9999999999998999999999999876555

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.11  E-value=0.063  Score=49.33  Aligned_cols=91  Identities=24%  Similarity=0.326  Sum_probs=56.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-C-eEEEEecCHHHHHHHHh--cCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCG-A-TIIAVARGAEKIKFLKS--LGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g-~-~v~~~~~~~~~~~~~~~--~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      |+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+.. .....+-.+    .+++.+..  .+.|+|+|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~--~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PESLAELL--RGCDVVIN   73 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HHHHHHHH--TTSSEEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HHHHHHHH--hcCCEEEE
Confidence            789999 999999999988775 4 89999999998776643  2222 122222222    22233333  35699999


Q ss_pred             CCChhhHH-HHHhcccCCCEEEEE
Q 019196          225 PVGGKLTK-ESLKLLNWGAQILVI  247 (344)
Q Consensus       225 ~~g~~~~~-~~~~~l~~~G~~v~~  247 (344)
                      |+|..... .+..+++.+-.+++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CCccchhHHHHHHHHHhCCCeecc
Confidence            99975333 344666777788873

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=96.09  E-value=0.15  Score=42.74  Aligned_cols=101  Identities=18%  Similarity=0.288  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEE---------EeCCCCCchhhHHHHHH
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV---------VDLSNESVIPSVKEFLK  212 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v---------~~~~~~~~~~~~~~~~~  212 (344)
                      .+.++.+||+.|+  |.|.-+..+|. .|++|++++.++.-.+.+ ++.+....         .......+.  ..++..
T Consensus        34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~--~~D~~~  108 (218)
T PRK13255         34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIY--CGDFFA  108 (218)
T ss_pred             CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEE--ECcccC
Confidence            4456789999996  67887777775 699999999999877765 33332110         000000000  000111


Q ss_pred             Hh--cCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEe
Q 019196          213 AR--KLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~--~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ..  ....||.|+|++--         ..+..+.++|+|+|++..+.
T Consensus       109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            00  12368999986631         23577889999999765544

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.09  E-value=0.21  Score=41.01  Aligned_cols=102  Identities=23%  Similarity=0.423  Sum_probs=60.9

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      .....++++++||=.|+  |.|..+..+++.. +.+|++++.+++..+.+++    ++...+ ..-..+.    .+....
T Consensus        33 ~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~d~----~~~~~~  105 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEGSA----PECLAQ  105 (196)
T ss_pred             HHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEECch----HHHHhh
Confidence            35567778888887775  5566677777654 5799999999887776643    454321 1111111    111111


Q ss_pred             hcCCCccEE-EeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKLKGVDVL-YDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~~~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .. ..+|.+ ++....  ..++.+.+.|+++|+++...
T Consensus       106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             CC-CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            11 123444 443221  45678889999999998864

>PRK09135 pteridine reductase; Provisional

Probab=96.09  E-value=0.08  Score=45.06  Aligned_cols=36  Identities=22%  Similarity=0.290  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++||+|++|++|..++..+...|++|++++++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            457899999999999999998888899999998763

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.07  E-value=0.099  Score=44.06  Aligned_cols=100  Identities=18%  Similarity=0.264  Sum_probs=71.7

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...++.|+++|+=.|  .|.|.+++.+|+..|.  +|+......+..+.|+    ++|....+.....+.       ...
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv-------~~~  158 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDV-------REG  158 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccc-------ccc
Confidence            578899999988877  4679999999988765  8999999988777774    345433222222222       222


Q ss_pred             hcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ..+..||.+|-=.+.  ..++.+.+.|+++|.++.+.
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence            233479998765554  57889999999999999874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.07  E-value=0.043  Score=43.72  Aligned_cols=87  Identities=23%  Similarity=0.208  Sum_probs=58.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|-++|. |.+|...+.-+...|++|++.++++++.+.+.+.|+... +    +    ..+..+     ..|+||-|+.
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s----~~e~~~-----~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-D----S----PAEAAE-----QADVVILCVP   66 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-S----S----HHHHHH-----HBSEEEE-SS
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-h----h----hhhHhh-----cccceEeecc
Confidence            36889999 999999999988899999999999999988887774322 1    1    233322     3589998887


Q ss_pred             h-hhHHH------HHhcccCCCEEEEEec
Q 019196          228 G-KLTKE------SLKLLNWGAQILVIGF  249 (344)
Q Consensus       228 ~-~~~~~------~~~~l~~~G~~v~~g~  249 (344)
                      . +....      .+..++++..++.++-
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             cchhhhhhhhhhHHhhccccceEEEecCC
Confidence            6 33322      4556667777777653

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.07  E-value=0.056  Score=38.64  Aligned_cols=85  Identities=28%  Similarity=0.297  Sum_probs=56.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC---CeEEEE-ecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCG---ATIIAV-ARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g---~~v~~~-~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|.|+ |.+|.+.+.-+...|   .+|+.. .+++++.+.+ ++++..... .   +    ..++.     ...|+||
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~---~----~~~~~-----~~advvi   66 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D---D----NEEAA-----QEADVVI   66 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E---E----HHHHH-----HHTSEEE
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-C---C----hHHhh-----ccCCEEE
Confidence            4678888 999999999999888   788844 9999988776 456643221 0   1    12222     2479999


Q ss_pred             eCCChhhHHHHHh---cccCCCEEEEE
Q 019196          224 DPVGGKLTKESLK---LLNWGAQILVI  247 (344)
Q Consensus       224 d~~g~~~~~~~~~---~l~~~G~~v~~  247 (344)
                      -|+....+...++   ...++..++++
T Consensus        67 lav~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   67 LAVKPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             E-S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEECHHHHHHHHHHHhhccCCCEEEEe
Confidence            9999876655443   44566666664

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.074  Score=45.27  Aligned_cols=33  Identities=27%  Similarity=0.410  Sum_probs=29.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      +.++||+|++|++|...+..+...|++|+++.+
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            568999999999999999988889999988654

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.04  E-value=0.027  Score=46.40  Aligned_cols=98  Identities=15%  Similarity=0.141  Sum_probs=60.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      +..+..++.+||-.|+  |.|..+..+++. |.+|++++.+++-.+.+++    .+...+ .....+.    .   ....
T Consensus        24 ~~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~----~---~~~~   92 (197)
T PRK11207         24 EAVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDL----N---NLTF   92 (197)
T ss_pred             HhcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecCh----h---hCCc
Confidence            3444556788999996  557788888875 8899999999886665543    222211 1111111    1   1111


Q ss_pred             CCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEe
Q 019196          216 LKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 ~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...||+|+.+..-         ..+..+.++|+|+|.++.+.
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            3469999875431         24567788999999966544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.02  E-value=0.032  Score=48.78  Aligned_cols=74  Identities=28%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+++++|+|+ |+.+.+++..+..+|+ +|+++.|+.+|.+.+ ++++... +....   .   ..+....  -..+|+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~---~~~~~~~--~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---G---DSGGLAI--EKAAEVL  194 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---c---hhhhhhc--ccCCCEE
Confidence            4678999999 9999999999999998 799999998877655 3443211 11111   1   0111111  1468999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |+|++.
T Consensus       195 InaTp~  200 (282)
T TIGR01809       195 VSTVPA  200 (282)
T ss_pred             EECCCC
Confidence            999985

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.02  E-value=0.16  Score=42.15  Aligned_cols=94  Identities=15%  Similarity=0.168  Sum_probs=61.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|||.|+ |.+|.-=+.++-..|++|+++.... ++...+.+.+-   +......+.  ...      -.++++||-
T Consensus        11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~---i~~~~~~~~--~~~------~~~~~lvia   78 (210)
T COG1648          11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGK---IKWIEREFD--AED------LDDAFLVIA   78 (210)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcC---cchhhcccC--hhh------hcCceEEEE
Confidence            4678999999 9999998888888999999988775 34443333222   111112220  011      124899999


Q ss_pred             CCChhhH-HHHHhcccCCCEEEEEeccC
Q 019196          225 PVGGKLT-KESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       225 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++.+.+ +......++.+.++.+....
T Consensus        79 At~d~~ln~~i~~~a~~~~i~vNv~D~p  106 (210)
T COG1648          79 ATDDEELNERIAKAARERRILVNVVDDP  106 (210)
T ss_pred             eCCCHHHHHHHHHHHHHhCCceeccCCc
Confidence            9998655 45667777778877765443

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.00  E-value=0.097  Score=46.46  Aligned_cols=87  Identities=23%  Similarity=0.298  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++.++..     +.....  ...+    +.++.     ...|+|+.+
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~~~~----l~e~l-----~~aDvvv~~  197 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--GREE----LSAFL-----SQTRVLINL  197 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--cccc----HHHHH-----hcCCEEEEC
Confidence            5789999999 99999999999999999999987654221     222111  1111    23332     357999999


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEec
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++. +    .+ ...+..|+++..++.++.
T Consensus       198 lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        198 LPNTPETVGIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             CCCCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence            874 2    22 457899999998888763

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.99  E-value=0.086  Score=45.31  Aligned_cols=33  Identities=27%  Similarity=0.366  Sum_probs=28.9

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEe
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVA  178 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~  178 (344)
                      .++++||+|++  +++|..++..+...|++|++++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            46899999997  4899999999989999998874

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.063  Score=45.21  Aligned_cols=75  Identities=20%  Similarity=0.323  Sum_probs=49.3

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc--CCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ||+|++|++|..+++.+...|++|++++++.++.+... ++  +.. +.+..+-.+. +.+.+..+..  .++|++|+++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~--~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDE-AAVDAFFAEA--GPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHhc--CCCCEEEECC
Confidence            58999999999999998889999999999877655432 22  221 2222222222 2244444332  4689999998


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      |.
T Consensus        78 g~   79 (230)
T PRK07041         78 AD   79 (230)
T ss_pred             CC
Confidence            73

>PRK14967 putative methyltransferase; Provisional

Probab=95.98  E-value=0.17  Score=42.65  Aligned_cols=95  Identities=25%  Similarity=0.327  Sum_probs=61.4

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ...++++++||-.|+ |. |..+..+++. ++ ++++++.+++..+.+++    .+....+.  ..++   . +   ...
T Consensus        31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~--~~d~---~-~---~~~   98 (223)
T PRK14967         31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR--RGDW---A-R---AVE   98 (223)
T ss_pred             hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE--ECch---h-h---hcc
Confidence            445778899999997 44 8888888875 55 99999999887765543    34322111  1122   1 1   112


Q ss_pred             CCCccEEEeCCCh----------------------------hhHHHHHhcccCCCEEEEE
Q 019196          216 LKGVDVLYDPVGG----------------------------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       216 ~~~~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~  247 (344)
                      ...||+|+.+.+-                            ..+..+.++|+++|+++.+
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            3579999865220                            1235677899999999865

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.96  E-value=0.054  Score=48.32  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK  185 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~  185 (344)
                      .+++|||+|++|.+|..++..+...|++|+++.++.++.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4679999999999999999988888999998888765433

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.96  E-value=0.029  Score=42.49  Aligned_cols=79  Identities=22%  Similarity=0.346  Sum_probs=48.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .-+|-|+|+ |.+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+  .            -..+|++|-
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~--~------------~~~aDlv~i   74 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE--I------------LRDADLVFI   74 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG--G------------GCC-SEEEE
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc--c------------cccCCEEEE
Confidence            347999999 9999999999999999988775 44445555543 44433332211  1            146899999


Q ss_pred             CCChhhHHHHHhcccC
Q 019196          225 PVGGKLTKESLKLLNW  240 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~  240 (344)
                      |++++.+......|..
T Consensus        75 avpDdaI~~va~~La~   90 (127)
T PF10727_consen   75 AVPDDAIAEVAEQLAQ   90 (127)
T ss_dssp             -S-CCHHHHHHHHHHC
T ss_pred             EechHHHHHHHHHHHH
Confidence            9998777665554443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.93  E-value=0.14  Score=44.32  Aligned_cols=104  Identities=18%  Similarity=0.328  Sum_probs=67.0

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC-cEEEeCCCCCchhhHHHHHHH-hc
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKA-RK  215 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~-~~  215 (344)
                      +....+++++.+||=+|+  +.|..+..+++..+++|++++.+++-.+.+++... ...+.....+.       ... ..
T Consensus        44 ~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~-------~~~~~~  114 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDI-------LKKDFP  114 (263)
T ss_pred             HHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCc-------ccCCCC
Confidence            335677889999999987  45666777777778899999999887777765321 11111111111       000 12


Q ss_pred             CCCccEEEeC--C---C--h--hhHHHHHhcccCCCEEEEEecc
Q 019196          216 LKGVDVLYDP--V---G--G--KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       216 ~~~~d~vid~--~---g--~--~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ...||+|+..  .   +  .  ..+..+.++|+|+|+++.....
T Consensus       115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~  158 (263)
T PTZ00098        115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC  158 (263)
T ss_pred             CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            3469999852  1   2  1  3457788999999999987643

>PLN00015 protochlorophyllide reductase

Probab=95.92  E-value=0.052  Score=48.19  Aligned_cols=75  Identities=25%  Similarity=0.337  Sum_probs=48.6

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHH-HhcCC---c-E--EEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          151 LVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFL-KSLGV---D-H--VVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~-~~~g~---~-~--v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      ||+|+++++|..+++.+...| ++|++++++.++.+.+ ++++.   . .  ..|..+.+   .++++....  ...++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD---SVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHH---HHHHHHHHHHhcCCCCC
Confidence            589999999999998888889 8999999987765544 33321   1 1  12333322   233333222  234699


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus        78 ~lInnAG~   85 (308)
T PLN00015         78 VLVCNAAV   85 (308)
T ss_pred             EEEECCCc
Confidence            99998873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.92  E-value=0.077  Score=52.48  Aligned_cols=82  Identities=21%  Similarity=0.317  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h----cCCc--EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVD--HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~~--~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +    .+..  ..+..+-.+. +.+.+.....  ..
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~~  491 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALAY  491 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHhc
Confidence            3679999999999999999999889999999999877654432 2    2321  1222222221 2233332221  23


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      +++|++++++|.
T Consensus       492 g~iDilV~nAG~  503 (676)
T TIGR02632       492 GGVDIVVNNAGI  503 (676)
T ss_pred             CCCcEEEECCCC
Confidence            479999999884

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.92  E-value=0.4  Score=42.65  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=34.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      -++|.|+|+ |.+|...++.+...|.+|++.+.+++..+.+
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~   46 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAAL   46 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            368999999 9999999999888999999999998765443

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.92  E-value=0.023  Score=48.33  Aligned_cols=107  Identities=14%  Similarity=0.230  Sum_probs=66.9

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      ....+++||++|+=.|  .|.|.++..+++..|  .+|+..+.++++.+.|+    .+|....+.....+..+..   ..
T Consensus        33 ~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g---~~  107 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEG---FD  107 (247)
T ss_dssp             HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG-----S
T ss_pred             HHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccc---cc
Confidence            4678899999998877  467888889998876  49999999999887774    3554321111111221000   00


Q ss_pred             HhcCCCccEEEeCCCh--hhHHHHHhcc-cCCCEEEEEecc
Q 019196          213 ARKLKGVDVLYDPVGG--KLTKESLKLL-NWGAQILVIGFA  250 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g~~  250 (344)
                      .-....+|.||-=.+.  ..+..+.+.| +++|+++.+...
T Consensus       108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~  148 (247)
T PF08704_consen  108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC  148 (247)
T ss_dssp             TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred             ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            0012468988755544  5788999999 899999998643

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.91  E-value=0.09  Score=46.17  Aligned_cols=35  Identities=31%  Similarity=0.371  Sum_probs=30.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~  181 (344)
                      .+++++|+|+ |++|.+++..+...|++ |+++.++.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            4678999999 99999999988889995 99999885

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.90  E-value=0.53  Score=40.32  Aligned_cols=99  Identities=13%  Similarity=0.121  Sum_probs=63.2

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .....+..+||-.|+ | .|..+..+++ .|.++++++.+++..+.+++... ...+..+-...         ......|
T Consensus        37 ~l~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~---------~~~~~~f  104 (251)
T PRK10258         37 MLPQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESL---------PLATATF  104 (251)
T ss_pred             hcCccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccC---------cCCCCcE
Confidence            333445678999997 3 3666555554 58899999999988888876432 12222111111         0123469


Q ss_pred             cEEEeCCCh-------hhHHHHHhcccCCCEEEEEeccC
Q 019196          220 DVLYDPVGG-------KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      |+|+....-       ..+..+.+.++|+|.++......
T Consensus       105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~~  143 (251)
T PRK10258        105 DLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQ  143 (251)
T ss_pred             EEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            999865432       34677889999999999865443

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.89  E-value=0.021  Score=41.66  Aligned_cols=87  Identities=15%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|||.|+ |.+|..-++.+...|++|++++...   ...+  +.-..   ....+.         ..-.++|+||.+
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~--~~i~~---~~~~~~---------~~l~~~~lV~~a   67 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE--GLIQL---IRREFE---------EDLDGADLVFAA   67 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH--TSCEE---EESS-G---------GGCTTESEEEE-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh--hHHHH---HhhhHH---------HHHhhheEEEec
Confidence            4678999999 9999999999988999999999875   1122  11111   111221         112579999999


Q ss_pred             CChhhHH-HHHhcccCCCEEEEEecc
Q 019196          226 VGGKLTK-ESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       226 ~g~~~~~-~~~~~l~~~G~~v~~g~~  250 (344)
                      ++.+..+ ......+..|.++.+...
T Consensus        68 t~d~~~n~~i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   68 TDDPELNEAIYADARARGILVNVVDD   93 (103)
T ss_dssp             SS-HHHHHHHHHHHHHTTSEEEETT-
T ss_pred             CCCHHHHHHHHHHHhhCCEEEEECCC
Confidence            9886554 455666668888876543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.88  E-value=0.079  Score=44.64  Aligned_cols=80  Identities=20%  Similarity=0.353  Sum_probs=58.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh--cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++|.|+ |.+|..+++.+...|..|++++.++++.....+  +.. +++..+..+     .+.++..+-..+|+++-++
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~-----~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD-----EDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC-----HHHHHhcCCCcCCEEEEee
Confidence            5889999 999999999999999999999999998776433  443 344333332     2445555667899999999


Q ss_pred             ChhhHHHHH
Q 019196          227 GGKLTKESL  235 (344)
Q Consensus       227 g~~~~~~~~  235 (344)
                      +.+..+..+
T Consensus        75 ~~d~~N~i~   83 (225)
T COG0569          75 GNDEVNSVL   83 (225)
T ss_pred             CCCHHHHHH
Confidence            985544433

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.87  E-value=0.036  Score=49.92  Aligned_cols=37  Identities=19%  Similarity=0.232  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++++|||+|++|.+|..+++.+...|++|++++++.+
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~   41 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS   41 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence            3578999999999999999999999999999887643

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.86  E-value=0.18  Score=42.54  Aligned_cols=89  Identities=22%  Similarity=0.339  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe---EEEEecC----HHH--------HHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT---IIAVARG----AEK--------IKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~---v~~~~~~----~~~--------~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      .+++++|+|+ |+.|..++..+...|++   +++++++    .++        ..+++.++... .+   .+    +.+.
T Consensus        24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~----l~~~   94 (226)
T cd05311          24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT----LKEA   94 (226)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC----HHHH
Confidence            5679999999 99999999999888984   8888887    333        22334443211 10   11    2222


Q ss_pred             HHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEEe
Q 019196          211 LKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      .     .++|++|++++...+ ...++.|.++..+..+.
T Consensus        95 l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          95 L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            2     248999999975444 45667777776665544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.82  E-value=0.11  Score=45.42  Aligned_cols=41  Identities=22%  Similarity=0.275  Sum_probs=35.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      .+++++|+|+ ||.+.+++..+...|+ ++++..++.+|.+.+
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            4678999999 9999999998888998 789999998876655

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.81  E-value=0.19  Score=45.89  Aligned_cols=71  Identities=27%  Similarity=0.392  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++++||+|+ |-+|.+++..+...|. +|++..++.+|.. +++++|+.. ..         ..++....  ..+|+||
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~---------l~el~~~l--~~~DvVi  243 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VA---------LEELLEAL--AEADVVI  243 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ec---------HHHHHHhh--hhCCEEE
Confidence            5788999999 9999999999999996 7888888888765 457888432 22         22222222  3589999


Q ss_pred             eCCChh
Q 019196          224 DPVGGK  229 (344)
Q Consensus       224 d~~g~~  229 (344)
                      -+++.+
T Consensus       244 ssTsa~  249 (414)
T COG0373         244 SSTSAP  249 (414)
T ss_pred             EecCCC
Confidence            999874

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.80  E-value=0.062  Score=45.91  Aligned_cols=37  Identities=41%  Similarity=0.559  Sum_probs=32.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .++++||+|+++++|.+++..+...|++++++.++.+
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~   40 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE   40 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence            4678999999999999999988889999888877754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.80  E-value=0.099  Score=44.88  Aligned_cols=34  Identities=26%  Similarity=0.340  Sum_probs=29.6

Q ss_pred             CCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecC
Q 019196          147 GQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       147 ~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      ++++||+|++  |++|...+..+...|++|++++++
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            5789999997  489999998888889999999876

>PRK08317 hypothetical protein; Provisional

Probab=95.80  E-value=0.13  Score=43.45  Aligned_cols=100  Identities=15%  Similarity=0.234  Sum_probs=67.0

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhc----CCcE-EEeCCCCCchhhHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL----GVDH-VVDLSNESVIPSVKEFL  211 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~~  211 (344)
                      .+...+.++++||-.|+ | .|..+..+++..  +.++++++.+++..+.+++.    +... ....+....        
T Consensus        12 ~~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--------   81 (241)
T PRK08317         12 FELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGL--------   81 (241)
T ss_pred             HHHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccC--------
Confidence            35677889999999998 4 488888888876  36899999998887777654    1111 111111111        


Q ss_pred             HHhcCCCccEEEeCCC-----h--hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      . .....||+|+-+..     .  ..+..+.++|+++|.++....
T Consensus        82 ~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         82 P-FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             C-CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            0 12346899875422     1  356788899999999987653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.80  E-value=0.12  Score=46.04  Aligned_cols=86  Identities=26%  Similarity=0.311  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|+++.|+|- |.+|.++++.++..|++|...++++. .+..+..++..+ +         ..++.     ...|++.-.
T Consensus       145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~-~---------l~ell-----~~sDii~l~  207 (324)
T COG1052         145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV-D---------LDELL-----AESDIISLH  207 (324)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec-c---------HHHHH-----HhCCEEEEe
Confidence            3789999999 99999999999999999999998865 333334443322 1         23333     247888877


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++. +    .+ ...+..|++++.+|-++
T Consensus       208 ~Plt~~T~hLin~~~l~~mk~ga~lVNta  236 (324)
T COG1052         208 CPLTPETRHLINAEELAKMKPGAILVNTA  236 (324)
T ss_pred             CCCChHHhhhcCHHHHHhCCCCeEEEECC
Confidence            664 2    22 66889999999998876

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.79  E-value=0.064  Score=47.91  Aligned_cols=39  Identities=31%  Similarity=0.337  Sum_probs=33.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI  184 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~  184 (344)
                      .++++||+|++|.+|..++..+...|++|++++++.++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            467999999999999999999988999998888776543

>PRK07069 short chain dehydrogenase; Validated

Probab=95.79  E-value=0.049  Score=46.52  Aligned_cols=76  Identities=25%  Similarity=0.378  Sum_probs=48.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHHH-hc----CCcE----EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFLK-SL----GVDH----VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~~-~~----g~~~----v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      ++|+|++|++|..+++.+...|++|++++++ .++.+.+. ++    +...    ..|..+.+-   +.+.....  ...
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~   78 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQ---WQALLAQAADAMG   78 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHH---HHHHHHHHHHHcC
Confidence            7999999999999999998889999999987 44443332 22    2111    123333222   33332221  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+++.+.|.
T Consensus        79 ~id~vi~~ag~   89 (251)
T PRK07069         79 GLSVLVNNAGV   89 (251)
T ss_pred             CccEEEECCCc
Confidence            68999999873

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.78  E-value=0.14  Score=45.85  Aligned_cols=99  Identities=17%  Similarity=0.250  Sum_probs=65.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHH-HHcCC-eEEEEecCHHHHHHH-Hh----cCCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIG-KVCGA-TIIAVARGAEKIKFL-KS----LGVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~-~~~g~-~v~~~~~~~~~~~~~-~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      ..++++|+|+ |..|...+..+ ...++ +|.+..+++++.+.+ ++    ++.... .+.+      .++..     ..
T Consensus       126 ~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~------~~~~~-----~~  192 (325)
T PRK08618        126 DAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS------ADEAI-----EE  192 (325)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC------HHHHH-----hc
Confidence            4578999999 99998777554 45576 788899988876544 32    233211 1221      22222     36


Q ss_pred             ccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcc
Q 019196          219 VDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP  258 (344)
Q Consensus       219 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  258 (344)
                      .|+|+.|++...-.-. .+++++-.+..+|.........+
T Consensus       193 aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~  231 (325)
T PRK08618        193 ADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELP  231 (325)
T ss_pred             CCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCC
Confidence            8999999987433223 88999999999997765433344

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.76  E-value=0.098  Score=43.74  Aligned_cols=93  Identities=18%  Similarity=0.319  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE--EeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV--VDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      ++.+||=.|+.|  |+++.-+|+ +|++|++++-+++-.+.++......-  ++|....    ++++..  .++.||+|+
T Consensus        59 ~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~----~edl~~--~~~~FDvV~  129 (243)
T COG2227          59 PGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT----VEDLAS--AGGQFDVVT  129 (243)
T ss_pred             CCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhccccccchhhh----HHHHHh--cCCCccEEE
Confidence            678899888844  566655555 68999999999888877764321111  3343322    233322  236899998


Q ss_pred             eC-----CCh--hhHHHHHhcccCCCEEEEE
Q 019196          224 DP-----VGG--KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       224 d~-----~g~--~~~~~~~~~l~~~G~~v~~  247 (344)
                      ..     +..  ..+..+.++++|+|.+..-
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            63     222  3457788999999988764

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.76  E-value=0.14  Score=44.15  Aligned_cols=95  Identities=22%  Similarity=0.243  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      ......++++||=+|+  |.|..+..+++.. +++|++++.+++-.+.+++.+.+.+ ..+       ..++   .....
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d-------~~~~---~~~~~   89 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGD-------VRDW---KPKPD   89 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcC-------hhhC---CCCCC
Confidence            4555678889999886  4577777887765 6799999999988887877654322 211       1111   12347


Q ss_pred             ccEEEeCCCh-------hhHHHHHhcccCCCEEEEE
Q 019196          219 VDVLYDPVGG-------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       219 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~  247 (344)
                      ||+|+-...-       ..+..+.+.|+|+|.++..
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9999875431       3457788999999999875

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.76  E-value=0.087  Score=44.57  Aligned_cols=71  Identities=27%  Similarity=0.443  Sum_probs=52.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      |+|+|++|.+|..+++.+...+.+|.+.+|+..  ..+.++..|+.. +..+-.+    .+.+.+..  .|+|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~v-v~~d~~~----~~~l~~al--~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEV-VEADYDD----PESLVAAL--KGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEE-EES-TT-----HHHHHHHH--TTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceE-eecccCC----HHHHHHHH--cCCceEEeecC
Confidence            799999999999999999888889999999864  345567788753 3433222    33444433  48999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.74  E-value=0.1  Score=44.89  Aligned_cols=39  Identities=33%  Similarity=0.406  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEEecCHHHHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKV----CGATIIAVARGAEKIKFL  187 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~----~g~~v~~~~~~~~~~~~~  187 (344)
                      .+||+|+++++|..++..+..    .|++|+++.++.++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~   44 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL   44 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence            589999999999988875543    699999999988766544

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.74  E-value=0.11  Score=39.24  Aligned_cols=97  Identities=19%  Similarity=0.296  Sum_probs=58.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CeEEEEecCH--HHH-HHHHhcCCcEEEeCCCCCchhh----------------HH
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGA--EKI-KFLKSLGVDHVVDLSNESVIPS----------------VK  208 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~--~~~-~~~~~~g~~~v~~~~~~~~~~~----------------~~  208 (344)
                      |.|+|++|++|..+..+.+...  .+|++.+...  +++ +.++++....+.-.++..+..-                .+
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            5799999999999999999986  5777655432  222 3446777777665544322110                11


Q ss_pred             HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEE
Q 019196          209 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  246 (344)
                      .+.+......+|+++++..+ ..+.-.+..++.+-++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence            12233333568999988644 667777777777666554

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.70  E-value=0.098  Score=45.26  Aligned_cols=81  Identities=21%  Similarity=0.222  Sum_probs=48.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH-Hhc----CCcE-E--EeCCCCCc-hhhHHHHHHHh--c
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL-KSL----GVDH-V--VDLSNESV-IPSVKEFLKAR--K  215 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~-~~~----g~~~-v--~~~~~~~~-~~~~~~~~~~~--~  215 (344)
                      .+++|+|+++++|..+++.+...|++|+++.++ .++.+.+ +++    +... .  .|..+.+. .+..+++.+..  .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            468999999999999999998899999987654 3333322 222    2111 1  23333221 11223333221  2


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            2469999999873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.66  E-value=0.039  Score=47.34  Aligned_cols=74  Identities=16%  Similarity=0.091  Sum_probs=52.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+||+| -|..++..+...|.+|+++..++...+.+...|...+.... .+    ...+.......++|+|+|++..
T Consensus         2 ~ILvlGGT~-egr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~-l~----~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTV-DSRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGA-LD----PQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECC-CC----HHHHHHHHHhcCCCEEEEcCCH
Confidence            699999955 49999988887899999999988777777766655554322 22    1223344455689999999874

This enzyme was found to be a monomer by gel filtration.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.65  E-value=0.11  Score=46.41  Aligned_cols=77  Identities=17%  Similarity=0.135  Sum_probs=47.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHH-HhcCC-c-EEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFL-KSLGV-D-HVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~-~~~g~-~-~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+++|||+|++|.+|..++..+...|  .+|++.+++..+...+ +.+.. . ..+..+-.+    ...+.+..  .++|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d----~~~l~~~~--~~iD   76 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD----KERLTRAL--RGVD   76 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC----HHHHHHHH--hcCC
Confidence            36789999999999999998877665  6898888776544333 22321 1 122222122    12222222  2589


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +||++++.
T Consensus        77 ~Vih~Ag~   84 (324)
T TIGR03589        77 YVVHAAAL   84 (324)
T ss_pred             EEEECccc
Confidence            99998873

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.65  E-value=0.084  Score=44.61  Aligned_cols=78  Identities=29%  Similarity=0.313  Sum_probs=47.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHH----HHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIK----FLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~----~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      +||+|++|++|..++..+...|++|++++++. ++.+    .++..+... .+..+-.+. ..+++.....  ...++|.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR-EDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999988899999998764 2222    223334322 222221111 1122222211  1246899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      ++.+.|.
T Consensus        80 vi~~ag~   86 (239)
T TIGR01830        80 LVNNAGI   86 (239)
T ss_pred             EEECCCC
Confidence            9998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02214 cinnamoyl-CoA reductase

Probab=95.65  E-value=0.1  Score=47.10  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=33.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      .+++|||+|++|.+|..++..+...|++|++++++.++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            46789999999999999999988889999999987653

>PRK01581 speE spermidine synthase; Validated

Probab=95.65  E-value=0.13  Score=46.26  Aligned_cols=96  Identities=20%  Similarity=0.214  Sum_probs=61.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcC-C---------cEEEeCCCCCchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG-V---------DHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g-~---------~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..++|||+|+  |.|.++..+++..+ .+|++++.+++-.+.++++. .         +.-+.....+    ..+.....
T Consensus       150 ~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~D----a~~fL~~~  223 (374)
T PRK01581        150 DPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCD----AKEFLSSP  223 (374)
T ss_pred             CCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECc----HHHHHHhc
Confidence            4468999996  56777788888654 48999999998888887521 0         0011111111    22333333


Q ss_pred             cCCCccEEEeCCCh------------hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG------------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ...||+||--...            +.+..+.+.|+|+|.++.-.
T Consensus       224 -~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        224 -SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             -CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence             3579999754322            14567889999999987753

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.64  E-value=0.095  Score=46.34  Aligned_cols=93  Identities=20%  Similarity=0.208  Sum_probs=59.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE---EEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH---VVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +|.|+|+ |.+|...+..+...|.+|++++++.++.+.+++.|...   ...... .......+      ...+|++|-|
T Consensus         2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~------~~~~d~vila   73 (304)
T PRK06522          2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPV-LAADDPAE------LGPQDLVILA   73 (304)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecc-cCCCChhH------cCCCCEEEEe
Confidence            5899999 99999999888888999999999877777776655421   000000 00000111      1579999999


Q ss_pred             CChhhHHHHH----hcccCCCEEEEEec
Q 019196          226 VGGKLTKESL----KLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~~~~~~~----~~l~~~G~~v~~g~  249 (344)
                      +.......++    ..+.++..++.+..
T Consensus        74 ~k~~~~~~~~~~l~~~l~~~~~iv~~~n  101 (304)
T PRK06522         74 VKAYQLPAALPSLAPLLGPDTPVLFLQN  101 (304)
T ss_pred             cccccHHHHHHHHhhhcCCCCEEEEecC
Confidence            9875444444    34444556666543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=95.63  E-value=0.054  Score=44.71  Aligned_cols=81  Identities=30%  Similarity=0.375  Sum_probs=55.0

Q ss_pred             CEEEEecCCChHHHHHHH-HHHHcCCe-EEEEecCHHH-HHHHHhcC----CcEEEe---CCCCCchhhHHHHHHHhcCC
Q 019196          148 QVLLVLGAAGGVGVAAVQ-IGKVCGAT-IIAVARGAEK-IKFLKSLG----VDHVVD---LSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~-~~~~~g~~-v~~~~~~~~~-~~~~~~~g----~~~v~~---~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ++++|.|+..|+|+-.++ +++..|.+ ++.+++++|+ .++++...    --+++.   ..+++......++.+..+..
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            459999999999998885 45666775 5567777776 33332221    112332   34455566677777888888


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      |.|+.++++|-
T Consensus        84 GlnlLinNaGi   94 (249)
T KOG1611|consen   84 GLNLLINNAGI   94 (249)
T ss_pred             CceEEEeccce
Confidence            99999999884

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.62  E-value=0.045  Score=45.06  Aligned_cols=98  Identities=13%  Similarity=0.126  Sum_probs=59.6

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .......++.+||-.|+  |.|..+..+++ .|++|++++.+++-.+.+++    .+...  .....+.    ..   ..
T Consensus        23 ~~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d~----~~---~~   90 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPL--RTDAYDI----NA---AA   90 (195)
T ss_pred             HHHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCc--eeEeccc----hh---cc
Confidence            34444555678999886  66887777776 48899999999876665533    23221  1111111    00   00


Q ss_pred             cCCCccEEEeCCC-----h----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+|+.+..     .    ..+..+.++|+|+|.++.+.
T Consensus        91 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        91 LNEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             ccCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            1246999976422     1    34567788999999965543

Part of a tellurite-reducing operon tehA and tehB

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.61  E-value=0.069  Score=48.16  Aligned_cols=35  Identities=17%  Similarity=0.229  Sum_probs=31.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            47999999999999999999989999999987653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.60  E-value=0.13  Score=46.65  Aligned_cols=78  Identities=24%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc--CCc-EEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GVD-HVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ..+.+|||+|++|.+|..+++.+...|++|++++++.++.+.+. .+  +.. ..+..+-.+.    ..+.+..  .++|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~--~~~d   81 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE----GSFDEAV--KGCD   81 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH----HHHHHHH--cCCC
Confidence            35678999999999999999999888999999888766544332 22  111 1222221211    2222222  2589


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      .||.+++.
T Consensus        82 ~Vih~A~~   89 (353)
T PLN02896         82 GVFHVAAS   89 (353)
T ss_pred             EEEECCcc
Confidence            99998863

>PLN03075 nicotianamine synthase; Provisional

Probab=95.60  E-value=0.13  Score=44.99  Aligned_cols=96  Identities=14%  Similarity=0.173  Sum_probs=64.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcC-----CcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLG-----VDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      +.++|+-+|. |+.|+.++-+++.+  +.+++.++.+++..+.+++.-     ...-+.....+.    .+.  .....+
T Consensus       123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da----~~~--~~~l~~  195 (296)
T PLN03075        123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADV----MDV--TESLKE  195 (296)
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECch----hhc--ccccCC
Confidence            7789999998 88999888887654  558999999999888776532     111112211111    111  011257


Q ss_pred             ccEEEeCC------Ch--hhHHHHHhcccCCCEEEEEe
Q 019196          219 VDVLYDPV------GG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       219 ~d~vid~~------g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ||+||-.+      ..  ..++...+.|+|||.++.-.
T Consensus       196 FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        196 YDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             cCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            99998765      11  35688889999999998754

>PLN00016 RNA-binding protein; Provisional

Probab=95.60  E-value=0.11  Score=47.53  Aligned_cols=95  Identities=20%  Similarity=0.198  Sum_probs=60.0

Q ss_pred             CCEEEEe----cCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-----------HhcCCcEEEeCCCCCchhhHHHHH
Q 019196          147 GQVLLVL----GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----------KSLGVDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       147 ~~~vlI~----g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~v~~~~~~~~~~~~~~~~  211 (344)
                      ..+|||+    |++|-+|..++..+...|.+|++++++.+....+           ...+...+. .   +.    .++.
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~---D~----~d~~  123 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G---DP----ADVK  123 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e---cH----HHHH
Confidence            4689999    9999999999998888899999999886542211           122332221 1   11    1122


Q ss_pred             HHhcCCCccEEEeCCChh--hHHHHHhcccCCC--EEEEEec
Q 019196          212 KARKLKGVDVLYDPVGGK--LTKESLKLLNWGA--QILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~g~  249 (344)
                      ......++|+|+++.+..  .....++.++..|  +++.++.
T Consensus       124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            222345799999998753  2344555555443  7887664

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.59  E-value=0.064  Score=50.60  Aligned_cols=76  Identities=21%  Similarity=0.426  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH---------------------HHHHHHHhcCCcEEEeCCCCCch
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------------------EKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .+++|+|+|+ |..|+.++..++..|.+|++++..+                     ...+.++++|.+..++.......
T Consensus       140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            5689999999 9999999999999999999887653                     23566778887655543221100


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                       ..+..   .  .++|.||.++|.
T Consensus       219 -~~~~~---~--~~~D~vilAtGa  236 (467)
T TIGR01318       219 -SLDDL---L--EDYDAVFLGVGT  236 (467)
T ss_pred             -CHHHH---H--hcCCEEEEEeCC
Confidence             01221   1  369999999996

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.59  E-value=0.17  Score=39.69  Aligned_cols=85  Identities=25%  Similarity=0.273  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|.|+|- |+-|.+.++-+|-.|.+|++..+..+ ..+.+++-|+...      +    ..+..     ...|+|+.
T Consensus         3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~------~----~~eAv-----~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM------S----VAEAV-----KKADVVML   66 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC------E----HHHHH-----HC-SEEEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec------c----HHHHH-----hhCCEEEE
Confidence            4689999999 99999999999999999998888776 6788888887421      1    22222     35899999


Q ss_pred             CCChh----hH-HHHHhcccCCCEEEE
Q 019196          225 PVGGK----LT-KESLKLLNWGAQILV  246 (344)
Q Consensus       225 ~~g~~----~~-~~~~~~l~~~G~~v~  246 (344)
                      .++++    .+ +.....|+++-.+++
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G~~L~f   93 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPGATLVF   93 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT-EEEE
T ss_pred             eCChHHHHHHHHHHHHhhCCCCCEEEe
Confidence            99874    33 455678888877766

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.14  Score=44.35  Aligned_cols=94  Identities=20%  Similarity=0.216  Sum_probs=67.9

Q ss_pred             ccchHHHHHHHHHHhcCCC-CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          127 LPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~-~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      .||.....+..+ +..++. .|++|+|+|.+.-+|.-++.++...|+.|++..+...                   +   
T Consensus       139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------~---  195 (285)
T PRK10792        139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------N---  195 (285)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------C---
Confidence            466555555555 444443 5899999999888999999999999999888765321                   1   


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                       +++..     +.+|+++.++|.+.+-. -++++++..++.+|..
T Consensus       196 -l~~~~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        196 -LRHHV-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             -HHHHH-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence             12111     46899999999865522 2889999999999854

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.57  E-value=0.12  Score=43.84  Aligned_cols=34  Identities=29%  Similarity=0.298  Sum_probs=30.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +++||+|++|++|..+++.+...|++|++++++.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~   36 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG   36 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence            4799999999999999998888899999998874

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.49  E-value=0.15  Score=40.27  Aligned_cols=95  Identities=18%  Similarity=0.220  Sum_probs=57.4

Q ss_pred             ccchHHHHHHHHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          127 LPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      +|+.....+..| +..++ -.|++|+|.|.+.-+|.-++.++...|+.|+......+..                     
T Consensus        16 ~PcTp~aii~lL-~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l---------------------   73 (160)
T PF02882_consen   16 VPCTPLAIIELL-EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL---------------------   73 (160)
T ss_dssp             --HHHHHHHHHH-HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH---------------------
T ss_pred             cCCCHHHHHHHH-HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc---------------------
Confidence            444444444444 33333 4688999999989999999999999999998876543211                     


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        ++..     +..|+|+-++|.+.+- -.++++++..++++|...
T Consensus        74 --~~~~-----~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   74 --QEIT-----RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             --HHHH-----TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred             --ccee-----eeccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence              1111     3589999999976542 236889999999988654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN02244 tocopherol O-methyltransferase

Probab=95.48  E-value=0.12  Score=46.52  Aligned_cols=94  Identities=13%  Similarity=0.244  Sum_probs=63.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      +++++||=+|+  |.|..+..+++..|++|++++.+++..+.+++    .+..   .....+..+.         -....
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~---------~~~~~  185 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ---------PFEDG  185 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC---------CCCCC
Confidence            67889988886  66778888888889999999999887666643    2321   1111111111         01234


Q ss_pred             CccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          218 GVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       218 ~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .||+|+-....       ..+.++.+.|+|+|+++....
T Consensus       186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        186 QFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            69999864332       245778899999999998754

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.46  E-value=0.12  Score=48.88  Aligned_cols=70  Identities=19%  Similarity=0.269  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|+|+ |++|.+++..+...|+++++..++.++.+.+. .++.. .+...         ...   .-..+|+|++
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---------~~~---~l~~~DiVIn  396 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---------SLP---ELHRIDIIIN  396 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---------Hhc---ccCCCCEEEE
Confidence            4678999998 99999999999999999999988877766543 33321 11111         110   1146899999


Q ss_pred             CCChh
Q 019196          225 PVGGK  229 (344)
Q Consensus       225 ~~g~~  229 (344)
                      |++..
T Consensus       397 atP~g  401 (477)
T PRK09310        397 CLPPS  401 (477)
T ss_pred             cCCCC
Confidence            99753

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.45  E-value=0.16  Score=45.49  Aligned_cols=96  Identities=22%  Similarity=0.135  Sum_probs=65.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEE--e--CCC-CCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--D--LSN-ESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~--~--~~~-~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      -+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+.+.+.+...  .  ... ........+.   .  ...|+|
T Consensus         5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~---~--~~aD~V   78 (328)
T PRK14618          5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEA---L--AGADFA   78 (328)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHH---H--cCCCEE
Confidence            36999999 9999999999888899999999988877766654211100  0  000 0000012221   1  358999


Q ss_pred             EeCCChhhHHHHHhcccCCCEEEEEec
Q 019196          223 YDPVGGKLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       223 id~~g~~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      +-|+........+..++++-.++.+..
T Consensus        79 i~~v~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         79 VVAVPSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             EEECchHHHHHHHHhcCcCCEEEEEee
Confidence            999998878888888888777776654

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.42  E-value=0.21  Score=43.45  Aligned_cols=100  Identities=18%  Similarity=0.184  Sum_probs=64.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc-CCcE-EE-eCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-GVDH-VV-DLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~-g~~~-v~-~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      -++ ++|||.|+  |-|-.+-.++|+... ++++++-+++=.++++++ +... .. +.+-+-..+...+..+.+.. +|
T Consensus        75 ~~p-k~VLiiGg--GdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~f  150 (282)
T COG0421          75 PNP-KRVLIIGG--GDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KF  150 (282)
T ss_pred             CCC-CeEEEECC--CccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cC
Confidence            344 59999995  667778888888765 899999998878888753 2111 00 11111111223444554443 89


Q ss_pred             cEEE-eCCCh----------hhHHHHHhcccCCCEEEEE
Q 019196          220 DVLY-DPVGG----------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       220 d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~  247 (344)
                      |+|| |++..          +.++.+.++|+++|.++.-
T Consensus       151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            9997 55433          2457888999999999875

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.40  E-value=0.82  Score=38.62  Aligned_cols=33  Identities=24%  Similarity=0.327  Sum_probs=28.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG  180 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~  180 (344)
                      +.+|+|.|. |++|..++..+.+.|. ++++++.+
T Consensus        11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            457999999 9999999999998998 77776654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.38  E-value=0.43  Score=39.76  Aligned_cols=108  Identities=16%  Similarity=0.190  Sum_probs=65.6

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE--EEeCCC
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH--VVDLSN  200 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~--v~~~~~  200 (344)
                      +..+...++.  ....+++++.+||-+|+  |.|..+..+++.. .+|++++.+++..+.++    +.+...  +...+.
T Consensus        61 ~~~p~~~~~l--~~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~  135 (212)
T PRK00312         61 ISQPYMVARM--TELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG  135 (212)
T ss_pred             eCcHHHHHHH--HHhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc
Confidence            3344444442  35677889999999986  4566666666653 58999999887665554    334332  111111


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEe
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...   .      .....||+|+-.... .......+.|+++|+++..-
T Consensus       136 ~~~---~------~~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        136 WKG---W------PAYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             ccC---C------CcCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence            110   0      112469999865543 33456779999999987654

>PRK10637 cysG siroheme synthase; Provisional

Probab=95.36  E-value=0.29  Score=46.07  Aligned_cols=93  Identities=11%  Similarity=0.027  Sum_probs=58.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|||.|| |.++.-=++.+...|++|+++...- ++...+.+.|-   +.+....+.  ...+      .++++||-
T Consensus        11 ~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~---i~~~~~~~~--~~dl------~~~~lv~~   78 (457)
T PRK10637         11 RDRDCLLVGG-GDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGM---LTLVEGPFD--ESLL------DTCWLAIA   78 (457)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCC---EEEEeCCCC--hHHh------CCCEEEEE
Confidence            4688999999 8888877777777899999887542 23333333332   122222231  1111      47899999


Q ss_pred             CCChhhHH-HHHhcccCCCEEEEEecc
Q 019196          225 PVGGKLTK-ESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       225 ~~g~~~~~-~~~~~l~~~G~~v~~g~~  250 (344)
                      |++.+.++ ......+..|.++.+...
T Consensus        79 at~d~~~n~~i~~~a~~~~~lvN~~d~  105 (457)
T PRK10637         79 ATDDDAVNQRVSEAAEARRIFCNVVDA  105 (457)
T ss_pred             CCCCHHHhHHHHHHHHHcCcEEEECCC
Confidence            99986554 455666677887776543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.35  E-value=0.095  Score=49.69  Aligned_cols=69  Identities=23%  Similarity=0.276  Sum_probs=48.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-----HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-----KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+++|+|+|+ |.+|+.++..++..|++|++++.++.     ..+.+++.|.....+....             ....+|
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~~D   80 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPEDTD   80 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCCCC
Confidence            4678999999 99999999999999999999986542     1234566676543322111             013588


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +|+-+.|.
T Consensus        81 ~Vv~s~Gi   88 (480)
T PRK01438         81 LVVTSPGW   88 (480)
T ss_pred             EEEECCCc
Confidence            99888875

>PRK00536 speE spermidine synthase; Provisional

Probab=95.33  E-value=0.061  Score=46.16  Aligned_cols=95  Identities=14%  Similarity=0.055  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCC-cEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      ..++|||.||  |=|.++-.++|+.. +|+.++-+++=.+.+++ +.. ...+  +++...- ..... ....+.||+||
T Consensus        72 ~pk~VLIiGG--GDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~--~DpRv~l-~~~~~-~~~~~~fDVII  144 (262)
T PRK00536         72 ELKEVLIVDG--FDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVK--NNKNFTH-AKQLL-DLDIKKYDLII  144 (262)
T ss_pred             CCCeEEEEcC--CchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhh--cCCCEEE-eehhh-hccCCcCCEEE
Confidence            3478999996  55777889999865 99999999887787776 321 1111  2211100 11111 22235799987


Q ss_pred             -eCCCh-hhHHHHHhcccCCCEEEEE
Q 019196          224 -DPVGG-KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       224 -d~~g~-~~~~~~~~~l~~~G~~v~~  247 (344)
                       |+.-. +.++.+.++|+++|.++.=
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v~Q  170 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFISV  170 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEEEC
Confidence             54444 4567888999999999873

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.33  E-value=0.21  Score=48.73  Aligned_cols=94  Identities=13%  Similarity=0.116  Sum_probs=69.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|+|.|. |.+|+.+++.++..|.++++++.++++.+.+++.|... +..+..+     .+.++..+-..+|.++-+++
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v-~~GDat~-----~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKV-YYGDATQ-----LELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeE-EEeeCCC-----HHHHHhcCCccCCEEEEEeC
Confidence            57899998 99999999999999999999999999999999888643 3333222     34555556668999999998


Q ss_pred             hhhHH----HHHhcccCCCEEEEEe
Q 019196          228 GKLTK----ESLKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~~~~~----~~~~~l~~~G~~v~~g  248 (344)
                      ++..+    ...+...|.-+++.-.
T Consensus       474 d~~~n~~i~~~~r~~~p~~~IiaRa  498 (601)
T PRK03659        474 EPEDTMKIVELCQQHFPHLHILARA  498 (601)
T ss_pred             CHHHHHHHHHHHHHHCCCCeEEEEe
Confidence            74332    2345556676776543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.31  E-value=0.063  Score=45.28  Aligned_cols=73  Identities=25%  Similarity=0.405  Sum_probs=48.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcE-EEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      |||+||+|-+|..++..+...|..|+.+.++..+...... ..... ..|..+.+   .+.++.+.   ..+|.||.+++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~---~~~~~~~~---~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKE---QLEKLLEK---ANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHH---HHHHHHHH---HTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccc---cccccccc---cCceEEEEeec
Confidence            7999999999999999999999998888887765544432 22211 12333222   23333332   37899999887


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      .
T Consensus        75 ~   75 (236)
T PF01370_consen   75 F   75 (236)
T ss_dssp             S
T ss_pred             c
Confidence            4

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.31  E-value=0.081  Score=52.05  Aligned_cols=76  Identities=18%  Similarity=0.335  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH---------------------HHHHHHhcCCcEEEeCCCCCch
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---------------------KIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .+++|+|+|+ |..|+.++..++..|++|+++++.+.                     +.++++++|.+..++...... 
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-  386 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD-  386 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc-
Confidence            3789999999 99999999999999999999886652                     456667888776655432111 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      -...+.   .  .+||.||.++|.
T Consensus       387 ~~~~~l---~--~~~DaV~latGa  405 (639)
T PRK12809        387 ITFSDL---T--SEYDAVFIGVGT  405 (639)
T ss_pred             CCHHHH---H--hcCCEEEEeCCC
Confidence            012221   1  369999999986

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.16  Score=43.37  Aligned_cols=34  Identities=21%  Similarity=0.388  Sum_probs=31.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +++||+|++|++|...++.+...|++|+++++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            4799999999999999999888899999999876

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.28  E-value=0.28  Score=42.61  Aligned_cols=95  Identities=17%  Similarity=0.233  Sum_probs=66.5

Q ss_pred             ccchHHHHHHHHHHhcCCC-CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          127 LPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~-~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      +|+........| +..++. .|++|+|+|.+.-+|.-++.++...|+.|++.......                      
T Consensus       137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~----------------------  193 (285)
T PRK14191        137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD----------------------  193 (285)
T ss_pred             CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH----------------------
Confidence            455555555444 444443 68999999997799999999999999998876432211                      


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                       +.+.   +  +.+|+++-++|.+.+-. -++++++..++.+|...
T Consensus       194 -l~~~---~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        194 -LSFY---T--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             -HHHH---H--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence             1111   1  35899999999866532 35779999999999643

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=95.27  E-value=0.1  Score=46.18  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=60.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|+|+|+ |++|...+..+...|.+|+.+.++.++.+..++- |. .+.+........ ...... .....+|++|-|+=
T Consensus         4 ~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~-~~~~~~-~~~~~~D~viv~vK   79 (305)
T PRK05708          4 TWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYA-IPAETA-DAAEPIHRLLLACK   79 (305)
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceeec-cCCCCc-ccccccCEEEEECC
Confidence            6999999 9999988888887899999999987777766543 43 121111100000 000000 01236899999986


Q ss_pred             hh----hHHHHHhcccCCCEEEEEec
Q 019196          228 GK----LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       228 ~~----~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ..    .+......+.++..++.+..
T Consensus        80 ~~~~~~al~~l~~~l~~~t~vv~lQN  105 (305)
T PRK05708         80 AYDAEPAVASLAHRLAPGAELLLLQN  105 (305)
T ss_pred             HHhHHHHHHHHHhhCCCCCEEEEEeC
Confidence            53    33445566777887777653

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.18  Score=43.81  Aligned_cols=95  Identities=17%  Similarity=0.242  Sum_probs=66.2

Q ss_pred             ccchHHHHHHHHHHhcCCC-CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          127 LPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~-~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      +||........| +..++. .|++|+|.|.+.-+|.-++.++...|+.|++..+..                   .+   
T Consensus       138 ~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t-------------------~~---  194 (285)
T PRK14189        138 RPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT-------------------RD---  194 (285)
T ss_pred             cCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC-------------------CC---
Confidence            455544444444 344433 689999999988889999999999999998754321                   11   


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                       +.+..     +..|+++-++|.+.+-.. ++++++..++.+|...
T Consensus       195 -l~~~~-----~~ADIVV~avG~~~~i~~-~~ik~gavVIDVGin~  233 (285)
T PRK14189        195 -LAAHT-----RQADIVVAAVGKRNVLTA-DMVKPGATVIDVGMNR  233 (285)
T ss_pred             -HHHHh-----hhCCEEEEcCCCcCccCH-HHcCCCCEEEEccccc
Confidence             12111     358999999998654332 8899999999998543

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.26  E-value=0.22  Score=45.01  Aligned_cols=98  Identities=17%  Similarity=0.288  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEe--cCHHHH-HHHHhcCCcEEEeCCCCCchhhHH--------------
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVA--RGAEKI-KFLKSLGVDHVVDLSNESVIPSVK--------------  208 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~--------------  208 (344)
                      ++|.|+|++|++|..++.+++..  .++|++.+  ++.+++ +.+++++...+.-.++... ..++              
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~-~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAA-KELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHH-HHHHHhhccCCceEEECh
Confidence            57999999999999999998765  56887775  334443 3446788776654443211 1111              


Q ss_pred             -HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEE
Q 019196          209 -EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  246 (344)
                       .+........+|+|++++++ ..+...+.+++.|-++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence             11122223458999999876 466667777777766655

>PLN02928 oxidoreductase family protein

Probab=95.26  E-value=0.14  Score=46.23  Aligned_cols=94  Identities=21%  Similarity=0.273  Sum_probs=60.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC----C-cEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG----V-DHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .++++.|+|. |.+|..+++.++.+|++|++.+++..+.. ...++    . ....+... .+ ..+.++.     ...|
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~L~ell-----~~aD  228 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKG-GH-EDIYEFA-----GEAD  228 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhh-hhhhccccccccccccccC-cc-cCHHHHH-----hhCC
Confidence            4789999999 99999999999999999999987632211 11111    0 00000000 11 1133333     3479


Q ss_pred             EEEeCCCh-----hhH-HHHHhcccCCCEEEEEe
Q 019196          221 VLYDPVGG-----KLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       221 ~vid~~g~-----~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      +|+.+++.     ..+ ...+..|+++..+|.++
T Consensus       229 iVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        229 IVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIA  262 (347)
T ss_pred             EEEECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence            99998873     122 56889999998888876

>PLN00203 glutamyl-tRNA reductase

Probab=95.26  E-value=0.21  Score=47.47  Aligned_cols=72  Identities=22%  Similarity=0.353  Sum_probs=50.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+. +++...+ ....      ..+.....  ..+|+||.
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~------~~dl~~al--~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKP------LDEMLACA--AEADVVFT  335 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eeec------HhhHHHHH--hcCCEEEE
Confidence            678999999 9999999999998997 7999999988876654 4532111 1100      11111111  36899999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      |++.
T Consensus       336 AT~s  339 (519)
T PLN00203        336 STSS  339 (519)
T ss_pred             ccCC
Confidence            9876

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.25  E-value=0.25  Score=43.65  Aligned_cols=88  Identities=18%  Similarity=0.212  Sum_probs=56.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|....   .  +    ..+.....  ...|+|+-|+..
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~---~--s----~~~~~~~~--~~~dvIi~~vp~   69 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV---A--N----LRELSQRL--SAPRVVWVMVPH   69 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc---C--C----HHHHHhhc--CCCCEEEEEcCc
Confidence            5889998 999998888888889999999999998888877664321   1  1    11211111  235777777665


Q ss_pred             hhH----HHHHhcccCCCEEEEEe
Q 019196          229 KLT----KESLKLLNWGAQILVIG  248 (344)
Q Consensus       229 ~~~----~~~~~~l~~~G~~v~~g  248 (344)
                      ...    +.....++++-.++.++
T Consensus        70 ~~~~~v~~~l~~~l~~g~ivid~s   93 (298)
T TIGR00872        70 GIVDAVLEELAPTLEKGDIVIDGG   93 (298)
T ss_pred             hHHHHHHHHHHhhCCCCCEEEECC
Confidence            322    33344455555555543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK00811 spermidine synthase; Provisional

Probab=95.25  E-value=0.16  Score=44.51  Aligned_cols=95  Identities=15%  Similarity=0.161  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc-C-----C--cEEEeCCCCCchhhHHHHHHHhcC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-G-----V--DHVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~-g-----~--~~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      ..++||++|+  |.|..+..+++..+. +|++++.+++-.+.+++. .     .  +.-+.....+    ..+.... ..
T Consensus        76 ~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D----a~~~l~~-~~  148 (283)
T PRK00811         76 NPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD----GIKFVAE-TE  148 (283)
T ss_pred             CCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc----hHHHHhh-CC
Confidence            4578999996  457778888887555 899999999877777652 1     1  1111111112    2223322 34


Q ss_pred             CCccEEEeCCCh-----------hhHHHHHhcccCCCEEEEE
Q 019196          217 KGVDVLYDPVGG-----------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       217 ~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  247 (344)
                      ..||+|+--...           +.+..+.+.|+++|.++.-
T Consensus       149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        149 NSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             CcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            579999854321           2346778999999998864

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.23  E-value=0.16  Score=40.33  Aligned_cols=78  Identities=22%  Similarity=0.326  Sum_probs=45.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHH-------HHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI-------KFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~-------~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      +++|.|++|++|..++..+...|+ .|+.+.++.++.       ..+++.+... .+..+-.+. ....+.....  ...
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   80 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADR-AALAAALAAIPARLG   80 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            689999999999999998888887 577777664321       2223334332 222222211 1223322221  134


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|.++++.+
T Consensus        81 ~id~li~~ag   90 (180)
T smart00822       81 PLRGVIHAAG   90 (180)
T ss_pred             CeeEEEEccc
Confidence            6899999887

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.21  E-value=0.19  Score=42.57  Aligned_cols=31  Identities=29%  Similarity=0.296  Sum_probs=28.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      +||+|++|++|..+++.+...|++|++++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~   31 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHS   31 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5899999999999999999899999888765

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.18  E-value=0.098  Score=46.57  Aligned_cols=38  Identities=29%  Similarity=0.344  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      .+++|||+|++|.+|..++..+...|.+|++++++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            35789999999999999999998899999998877553

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.13  E-value=0.23  Score=42.72  Aligned_cols=97  Identities=19%  Similarity=0.199  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ....+.++++||=+|+  |.|..+..+++.. +.+|++++.+++-.+.+++.... .+...+-..+          ....
T Consensus        25 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~----------~~~~   92 (258)
T PRK01683         25 ARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASW----------QPPQ   92 (258)
T ss_pred             hhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhcc----------CCCC
Confidence            4455678889999986  5677788888776 57999999999877777654221 2222211111          1234


Q ss_pred             CccEEEeCCCh-------hhHHHHHhcccCCCEEEEEe
Q 019196          218 GVDVLYDPVGG-------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .||+|+-...-       ..+..+.+.|+++|.++...
T Consensus        93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~  130 (258)
T PRK01683         93 ALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM  130 (258)
T ss_pred             CccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence            79999865442       34677889999999988753

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.13  E-value=0.1  Score=44.09  Aligned_cols=72  Identities=24%  Similarity=0.392  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|+|++|++|..++..+...|++|++++++....     .... ..+..+   ..+...++.+..  .++|++++
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D---~~~~~~~~~~~~--~~id~lv~   73 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----LSGNFHFLQLD---LSDDLEPLFDWV--PSVDILCN   73 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----cCCcEEEEECC---hHHHHHHHHHhh--CCCCEEEE
Confidence            357899999999999999998888899999988765321     1111 122221   111123333322  46899999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      +.|
T Consensus        74 ~ag   76 (235)
T PRK06550         74 TAG   76 (235)
T ss_pred             CCC
Confidence            887

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.12  E-value=0.15  Score=40.37  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=53.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc------EEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD------HVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~------~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      +|.|+|+ |.+|.+++..+...|.+|+...++++..+.+++-+..      ..+.. ........++..     .+.|++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~-----~~ad~I   73 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEAL-----EDADII   73 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHH-----TT-SEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHh-----CcccEE
Confidence            5889999 9999999999999999999999998877777543311      11110 000111122222     468999


Q ss_pred             EeCCChhhHHHHHhcccC
Q 019196          223 YDPVGGKLTKESLKLLNW  240 (344)
Q Consensus       223 id~~g~~~~~~~~~~l~~  240 (344)
                      +-+++....+..++.+++
T Consensus        74 iiavPs~~~~~~~~~l~~   91 (157)
T PF01210_consen   74 IIAVPSQAHREVLEQLAP   91 (157)
T ss_dssp             EE-S-GGGHHHHHHHHTT
T ss_pred             EecccHHHHHHHHHHHhh
Confidence            999998666555554444

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.12  E-value=0.93  Score=36.88  Aligned_cols=97  Identities=18%  Similarity=0.339  Sum_probs=62.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ....+.++.+||=+|+  |.|..+..+++.. +.+|++++.+++..+.+++    ++...+ .....+.   ..     .
T Consensus        25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i-~~~~~d~---~~-----~   93 (187)
T PRK08287         25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNI-DIIPGEA---PI-----E   93 (187)
T ss_pred             HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCe-EEEecCc---hh-----h
Confidence            4556778889988886  4577777777765 4699999999887766643    332211 1111111   00     0


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEE
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (344)
                      ....||+|+.....    ..+..+.+.|+++|+++..
T Consensus        94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            12469999865432    3557788999999998764

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.11  E-value=0.08  Score=46.33  Aligned_cols=95  Identities=8%  Similarity=0.157  Sum_probs=58.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh-cCCC-ccEEEeC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR-KLKG-VDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~-~d~vid~  225 (344)
                      +|||+|++|.+|..+++.+...|.+|.++++++++..   ..+... ..|+.+.+.   +....+.. .-.+ +|.+|-+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~---l~~a~~~~~~~~g~~d~v~~~   74 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDT---WDNPFSSDDGMEPEISAVYLV   74 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHH---HHHHHhcccCcCCceeEEEEe
Confidence            4899999999999999998888999999999876432   123221 224433322   22222111 1145 8999877


Q ss_pred             CCh-----hhHHHHHhcccCCC--EEEEEec
Q 019196          226 VGG-----KLTKESLKLLNWGA--QILVIGF  249 (344)
Q Consensus       226 ~g~-----~~~~~~~~~l~~~G--~~v~~g~  249 (344)
                      .+.     ......++.++..|  ++|.++.
T Consensus        75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            763     12233445554444  6777764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.09  E-value=0.28  Score=47.48  Aligned_cols=92  Identities=15%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ++++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|...+. .+..+     ++.++..+-+.+|.++-+++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~-----~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAAN-----EEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCC-----HHHHHhcCccccCEEEEEcC
Confidence            57899999 9999999999999999999999999999999988765443 33222     23444445567898887776


Q ss_pred             hhhH----HHHHhcccCCCEEEE
Q 019196          228 GKLT----KESLKLLNWGAQILV  246 (344)
Q Consensus       228 ~~~~----~~~~~~l~~~G~~v~  246 (344)
                      ++.-    -...+...+.-+++.
T Consensus       491 ~~~~~~~iv~~~~~~~~~~~iia  513 (558)
T PRK10669        491 NGYEAGEIVASAREKRPDIEIIA  513 (558)
T ss_pred             ChHHHHHHHHHHHHHCCCCeEEE
Confidence            5321    123344445555554

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.06  E-value=0.26  Score=39.92  Aligned_cols=79  Identities=23%  Similarity=0.288  Sum_probs=42.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH----H---HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc--CCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA----E---KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK--LKG  218 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~----~---~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~--~~~  218 (344)
                      ++||+|+.|++|+..++.+...+. +++++.++.    +   ..+.+++.|....+-.-+....+.+.++.....  ...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999998888776 888888882    1   223334555432221112222222333333221  235


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|-||.+.+
T Consensus        82 i~gVih~ag   90 (181)
T PF08659_consen   82 IDGVIHAAG   90 (181)
T ss_dssp             EEEEEE---
T ss_pred             cceeeeeee
Confidence            677777766

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.06  E-value=0.53  Score=40.68  Aligned_cols=101  Identities=16%  Similarity=0.197  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHhc-C------Cc--EEEeCCCCCchhhHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKSL-G------VD--HVVDLSNESVIPSVK  208 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~-g------~~--~v~~~~~~~~~~~~~  208 (344)
                      +...++++++||-+|+  |.|..+..+++..+  .+|++++.+++-.+.+++. .      ..  .....+..+.     
T Consensus        67 ~~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~l-----  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDL-----  139 (261)
T ss_pred             HHhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccC-----
Confidence            3456788899999987  45667777777654  5899999999877776532 1      11  1111111111     


Q ss_pred             HHHHHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEeccC
Q 019196          209 EFLKARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                          -.....||.|+-+.+-       ..+.++.+.|+|+|+++.+....
T Consensus       140 ----p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        140 ----PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             ----CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence                0123469999764331       35688999999999998876543

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.05  E-value=0.28  Score=43.33  Aligned_cols=85  Identities=24%  Similarity=0.310  Sum_probs=61.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|- |.+|...++.++..|.+|++..+.....+.++..|+. +.     +    +.++.     ...|+|+.+
T Consensus        15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----s----l~Eaa-----k~ADVV~ll   78 (335)
T PRK13403         15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----S----VSEAV-----RTAQVVQML   78 (335)
T ss_pred             CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----C----HHHHH-----hcCCEEEEe
Confidence            5789999999 9999999999999999998887665455566666763 21     1    22322     357999998


Q ss_pred             CChh----hH-HHHHhcccCCCEEEE
Q 019196          226 VGGK----LT-KESLKLLNWGAQILV  246 (344)
Q Consensus       226 ~g~~----~~-~~~~~~l~~~G~~v~  246 (344)
                      ++.+    .+ ...+..|+++..+++
T Consensus        79 LPd~~t~~V~~~eil~~MK~GaiL~f  104 (335)
T PRK13403         79 LPDEQQAHVYKAEVEENLREGQMLLF  104 (335)
T ss_pred             CCChHHHHHHHHHHHhcCCCCCEEEE
Confidence            8752    33 357788888876655

>PLN02686 cinnamoyl-CoA reductase

Probab=95.05  E-value=0.2  Score=45.72  Aligned_cols=45  Identities=18%  Similarity=0.187  Sum_probs=36.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  189 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  189 (344)
                      ..+++|||+|++|.+|..++..+...|++|+++.++.++.+.+++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~   95 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE   95 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            346799999999999999999998899999988877665544433

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.05  E-value=0.26  Score=43.73  Aligned_cols=83  Identities=25%  Similarity=0.370  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|+++.|+|- |.+|..++++++..|++|++.++.....    ..+..    +  .+    ++++.     ...|+|..+
T Consensus       144 ~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~~~~~----~--~~----l~ell-----~~sDvv~lh  203 (311)
T PRK08410        144 KGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK----NEEYE----R--VS----LEELL-----KTSDIISIH  203 (311)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc----ccCce----e--ec----HHHHh-----hcCCEEEEe
Confidence            5789999999 9999999999999999999998753210    11111    1  11    34443     246999988


Q ss_pred             CCh--h---hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG--K---LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~--~---~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++.  +   .+ ...+..|+++..+|.++
T Consensus       204 ~Plt~~T~~li~~~~~~~Mk~~a~lIN~a  232 (311)
T PRK08410        204 APLNEKTKNLIAYKELKLLKDGAILINVG  232 (311)
T ss_pred             CCCCchhhcccCHHHHHhCCCCeEEEECC
Confidence            874  1   23 67889999999998876

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.02  E-value=0.22  Score=48.80  Aligned_cols=93  Identities=17%  Similarity=0.232  Sum_probs=67.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ..+|+|.|. |.+|+.+++.++..|.++++++.++++.+.+++.|.. ++..+..+     .+.++..+-..+|.++-|+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~-----~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMK-VFYGDATR-----MDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCe-EEEEeCCC-----HHHHHhcCCCcCCEEEEEe
Confidence            358999999 9999999999999999999999999999999988864 33333322     2445555556799999999


Q ss_pred             ChhhHH----HHHhcccCCCEEEE
Q 019196          227 GGKLTK----ESLKLLNWGAQILV  246 (344)
Q Consensus       227 g~~~~~----~~~~~l~~~G~~v~  246 (344)
                      +++..+    ...+.+.|+-+++.
T Consensus       473 ~d~~~n~~i~~~ar~~~p~~~iia  496 (621)
T PRK03562        473 DDPQTSLQLVELVKEHFPHLQIIA  496 (621)
T ss_pred             CCHHHHHHHHHHHHHhCCCCeEEE
Confidence            874322    23344455555544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	344
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		5e-29
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		1e-20
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		9e-19
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-18
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		3e-18
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		4e-18
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-16
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		6e-15
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		8e-15
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-14
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		4e-14
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		5e-14
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		7e-14
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-13
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-13
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-13
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		4e-13
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		6e-13
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		1e-12
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-12
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-12
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		5e-12
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		4e-11
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		4e-11
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		9e-11
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		1e-09
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-09
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		2e-08
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		5e-08
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		5e-08
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		7e-08
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		7e-08
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		7e-08
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		9e-08
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		4e-07
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		5e-07
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		1e-06
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-06
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		2e-06
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		5e-06
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		8e-06
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		1e-05
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-05
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		3e-05
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		3e-05
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		6e-05
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		1e-04
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-04
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		4e-04
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		4e-04
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		8e-04
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-04
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		9e-04

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score =  125 bits (313), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 9/296 (3%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           V V VKA  + + +YL   G+YQ K   PFVPG + +G V +  P  S  K GD V  F 
Sbjct: 51  VVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSA-PEGSGIKPGDRVMAFN 109
Query: 100 ALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
            +G +A+ +    ++  P P   D   A AL   + T + A   R QL +G+        
Sbjct: 110 FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAA 169
Query: 157 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
                   QI K  GA +IAV       +F+KS+G D V+ L  E    +V+E   A   
Sbjct: 170 GGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPL-EEGWAKAVRE---ATGG 225
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
            GVD++ DP+GG    ++++ L    ++LV+GFA+G IP I  N  L++N ++ G+ WG 
Sbjct: 226 AGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGE 285
Query: 277 YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           +       L ++   L    A+G+    +S     SE   A     D KV GK+++
Sbjct: 286 FLRTHADYLYETQAGLEKLVAEGM-RPPVSARIPLSEGRQALQDFADGKVYGKMVL 340

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 148/363 (40%), Gaps = 54/363 (14%)
Query: 1   MEALVCRKLGDPTV-SIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V R  G P V  + D   P      EP P+      VRVR+KA +LN+ +     G
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVP------EPGPK-----EVRVRLKAAALNHLDVWVRKG 49
Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGFAAL----------- 101
               K PLP V G+D SG VDAVGP V  F  GD V       CG               
Sbjct: 50  VASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109
Query: 102 ---------GSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 149
                    G++A+++V   A+  P PK      AAA+P+ F T+   +V +  +  G  
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDD 169
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
                          QI K+ GA +IA A   +K++  K+LG D  V+ ++      V+ 
Sbjct: 170 VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRR 229
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
                  KG D + D  G    +  +K    G +I + G +SG    +P      +  ++
Sbjct: 230 LTGG---KGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI 286
Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
            G    S         +  L  +L +  +G +   +        A      +E+R+V GK
Sbjct: 287 LGSTMAS---------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337
Query: 330 VMI 332
           V++
Sbjct: 338 VVL 340

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 38/335 (11%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P   +             P P+      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           Y  +   PF+PG +  G V+           G         G  A+ +   +    P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 177
           G     AAA PV+F T+++AL  RAQ   G+                Q+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           A   EK+    +LG +     +    +P      +A+   G+D++ + V GK  +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L  G +++ IG A GE+  IP    + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 266
Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           + L  + +   +  +EA  AF A+ DR   GKV++
Sbjct: 267 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 300

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           PIP+ +    V ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S F
Sbjct: 53  PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF 109
Query: 90  KVGDTVCGFAAL-GSFAQF-IVADQ--FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
           K GD V   + + G +A++ + AD   + +P+  D    AA+ + + T++ AL+H A + 
Sbjct: 110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP 205
           +G+                QI +  G  I+  A   E  K +   G   V +    + I 
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYID 229
Query: 206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
            +K+++     KG+D++ + +      + L LL+ G +++V+G + G I + P +
Sbjct: 230 KIKKYVGE---KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG-SRGTIEINPRD 280

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 137/317 (43%), Gaps = 28/317 (8%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP--GSDYSGTVDAVGPNVS 87
           P+P +     V VR +A  +N  +  Q  G Y   PP    P  G + SG +  VGP VS
Sbjct: 49  PLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSY--PPPKDASPILGLELSGEIVGVGPGVS 105
Query: 88  NFKVGDTVCGFAALGSFAQFIV--ADQ-FPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 144
            + VGD VCG A  G++A++ +  A Q  P PKG D + AAALP  F T    L   A L
Sbjct: 106 GYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGL 165
Query: 145 SSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
           + G+                Q+ +  GA + A A    K +  + LG    ++  +E   
Sbjct: 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSE--- 222
Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-- 262
                 +KA   +GVD++ D +G    + ++  L     + +I F  G +     N++  
Sbjct: 223 -DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV-AEKVNLSPI 280
Query: 263 LVKNWTVHGLYWGSYKIHRPHVLED--SLRELLL---WA--AKGLITIHISHTYSPSEAN 315
            VK  TV G         RP   E+  ++R+ LL   W     G +   I   ++  +  
Sbjct: 281 XVKRLTVTG------STXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA 334
Query: 316 LAFSAIEDRKVIGKVMI 332
            A   +E+   +GKV +
Sbjct: 335 DAHRLLEEGSHVGKVXL 351

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSN 88
           P+P + S   + ++ K T +NY       G Y  EKP   +V G + SGTV A G  V+N
Sbjct: 29  PVPSI-SEEELLIKNKYTGVNYIESYFRKGIYPCEKP---YVLGREASGTVVAKGKGVTN 84
Query: 89  FKVGDTVCGFAALGSFAQFI-VADQFPV---PKGCD-----LLAAAALPVAFGTSHVALV 139
           F+VGD V  + +  +FAQ+  ++ Q PV   PKG       L AA  L V    S     
Sbjct: 85  FEVGDQVA-YISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEA 143
Query: 140 HRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
           +   +  G                 Q+ K+ GA  IAVA   EK+K  K  G +++++ S
Sbjct: 144 Y--HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS 201
Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP---- 255
            E ++  V +F      KGVD  +D VG    + SL  L      +  G ASG IP    
Sbjct: 202 KEDILRQVLKFTNG---KGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSI 258
Query: 256 --VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 313
             + P NI LV+   ++G       I  P   +    E         + I I  TY   +
Sbjct: 259 TRLSPKNITLVRP-QLYGY------IADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD 311
Query: 314 ANLAFSAIEDRKVIGKVMI 332
              A + IE RK +GK+++
Sbjct: 312 YRTAAADIESRKTVGKLVL 330

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 139/350 (39%), Gaps = 49/350 (14%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HD K         P+P+      + VR  A SLNY + L +          PFVP 
Sbjct: 35  TVAPHDLKL-----AERPVPEAGEHDII-VRTLAVSLNYRDKLVLETGXGLDLAFPFVPA 88
Query: 73  SDYSGTVDAVGPNVSNFKVGDTV------------------------CGFAALGSFAQFI 108
           SD SG V+AVG +V+ F+ GD V                         G A  G  ++++
Sbjct: 89  SDXSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYV 148
Query: 109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQ 165
           V  +      PK  D   A+ LP A  T+  ALV +  L +G                 Q
Sbjct: 149 VLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGD-RVVVQGTGGVALFGLQ 207
Query: 166 IGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 225
           I K  GA +I  +   EK+    +LG DH ++   E  +  V      R   G D + + 
Sbjct: 208 IAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR---GADHILEI 264
Query: 226 VGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 285
            GG    +SLK +    +I VIG   G     P    L+K+  V G+  G    HR   L
Sbjct: 265 AGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVG----HR-RAL 319
Query: 286 EDSLRELLLWAAKGLITIHISHTYSPSE-ANLAFSAIEDRKVIGKVMIAF 334
           ED +  +     K +I      T  P   A+L      DR   GKV+I F
Sbjct: 320 EDLVGAVDRLGLKPVIDXRYKFTEVPEALAHL------DRGPFGKVVIEF 363

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 145/337 (43%), Gaps = 30/337 (8%)
Query: 16  IHDEKSPIVLSK-TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QEKPPLPFVPGS 73
           + +   P VL K   P P   +   V V+++A+  N  +     G+    + PLP + G 
Sbjct: 13  VEEANGPFVLRKLARPQP---APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGX 69
Query: 74  DYSGTVDAVGPNVSNFKVGDTVCGFAA-----LGSFAQFIVADQFPV---PKGCDLLAAA 125
           D +GTV AVGP V +F+VGD V G         G+ AQF   D   +   P       A+
Sbjct: 70  DLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQAS 129
Query: 126 ALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIK 185
            LP+ F T+   LV RAQ+  GQ                QI    GA + A ARG++ ++
Sbjct: 130 VLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSD-LE 188
Query: 186 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWGAQI 244
           +++ LG    +D S E    + +        +G D++YD +GG +   S   +  +G  +
Sbjct: 189 YVRDLGATP-IDASREPEDYAAEHTAG----QGFDLVYDTLGGPVLDASFSAVKRFGHVV 243
Query: 245 LVIGFASGEIPVIPANIALVKN-WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 303
             +G+ + ++  +    A     +T+H L       H      + LRE       G +  
Sbjct: 244 SCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAH----FGEXLREADALVQTGKLAP 299
Query: 304 HIS-HTYSPSEANLAFSAIEDRKVI----GKVMIAFD 335
            +   T+S +E   A+ A+  R  +    GK+ I  +
Sbjct: 300 RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P   +             P P+      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLELVDL-----------PEPEAEEGEVV-LRVEAVGLNFADHLMRLGA 48
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           Y  +   PF+PG +  G V+           G         G  A+ +   +    P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVVE-----------GRRYAALVPQGGLAERVAVPKGALLPLPE 97
Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAV 177
           G     AAA PV+F T+++AL  RAQ   G+                Q+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156
Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           A   EK+    +LG +     +    +P      +A+   G+D++ + V GK  +ESL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAE---VPE-----RAKAWGGLDLVLE-VRGKEVEESLGL 207
Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L  G +++ I       P+ P  + + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIA------PIPPLRL-MRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 259
Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           + L  + +   +  +EA  AF A+ DR   GKV++
Sbjct: 260 RELRPV-VGPVFPFAEAEAAFRALLDRGHTGKVVV 293

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 134/321 (41%), Gaps = 20/321 (6%)
Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVP---GSDYSGT 78
           P VL   +  P+     AV VR KA  LN+ +     G Y    P PF+P   G++ +G 
Sbjct: 13  PEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLY----PAPFLPSGLGAEGAGV 68
Query: 79  VDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQFPVPKGCDLLA---AAALPVAFGTS 134
           V+AVG  V+ FKVGD V  G   LG++++  V  +  + K  D ++   AAAL +   T 
Sbjct: 69  VEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV 128
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
              L    Q+  G+                Q  K  GA +I      EK    K+LG   
Sbjct: 129 QYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE 188
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI 254
            +D S+E V   V E    +K     V+YD VG      SL  +    + LV+ F +   
Sbjct: 189 TIDYSHEDVAKRVLELTDGKKCP---VVYDGVGQDTWLTSLDSV--APRGLVVSFGNASG 243
Query: 255 PVIPANIALV---KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSP 311
           PV   N+ ++    +  V     GSY  +    L+    EL    A G + +     Y+ 
Sbjct: 244 PVSGVNLGILAQKDSVYVTRPTLGSYA-NNAQNLQTMADELFDMLASGKLKVDGIEQYAL 302
Query: 312 SEANLAFSAIEDRKVIGKVMI 332
            +A  A   +  R+  G  ++
Sbjct: 303 KDAAKAQIELSARRTTGSTIL 323

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 27/306 (8%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+      V +RV+A  LN+A++L  LG Y  +   PF+PG +  G V+         
Sbjct: 19  PEPEAEEGEVV-LRVEAVGLNFADHLXRLGAYLTRLHPPFIPGXEVVGVVEG-------- 69
Query: 90  KVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 146
                       G  A+ +   +    P+P+G     AAA PV+F T+++AL  RAQ   
Sbjct: 70  ---RRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLAL-KRAQARP 125
Query: 147 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 206
           G+                Q+ +  G  ++A A   EK+    +LG +     +    +P 
Sbjct: 126 GEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLALGAEEAATYAE---VPE 182
Query: 207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 266
                +A+   G+D++ + V GK  +ESL LL  G +++ IG A GE+  IP      +N
Sbjct: 183 -----RAKAWGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLXRRN 236
Query: 267 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV 326
             V G +W +  +    ++E++L  LL    + L  + +   +  +EA  AF A+ DR  
Sbjct: 237 LAVLG-FWLTPLLREGALVEEALGFLLPRLGRELRPV-VGPVFPFAEAEAAFRALLDRGH 294
Query: 327 IGKVMI 332
            GKV++
Sbjct: 295 TGKVVV 300

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
           VRV++ A  +N ++   I G Y   P LP V G++    V AVG NV+  K GD V    
Sbjct: 44  VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 103
Query: 99  AALGSF---AQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
           A LG++   A F       VP    L +AA L V   T++  L+   QL  G        
Sbjct: 104 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 163
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 211
                    QI    G   I V R    I+     LKSLG +HV+    E   P +K F 
Sbjct: 164 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 222
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
           K   +    +  + VGGK + E L+ L  G  ++  G  + +  V   ++ + K+  + G
Sbjct: 223 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 280
Query: 272 LYWGSYKI-HRPHVLEDSLRELLL 294
            +   +K  H P    D  +EL+L
Sbjct: 281 FWLSQWKKDHSP----DQFKELIL 300

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 16/264 (6%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GF 98
           VRV++ A  +N ++   I G Y   P LP V G++    V AVG NV+  K GD V    
Sbjct: 57  VRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPAN 116
Query: 99  AALGSF---AQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
           A LG++   A F       VP    L +AA L V   T++  L+   QL  G        
Sbjct: 117 AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS 176
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFL 211
                    QI    G   I V R    I+     LKSLG +HV+    E   P +K F 
Sbjct: 177 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVIT-EEELRRPEMKNFF 235
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
           K   +    +  + VGGK + E L+ L  G  ++  G  + +  V   ++ + K+  + G
Sbjct: 236 K--DMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRG 293
Query: 272 LYWGSYKI-HRPHVLEDSLRELLL 294
            +   +K  H P    D  +EL+L
Sbjct: 294 FWLSQWKKDHSP----DQFKELIL 313

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 29/286 (10%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 45  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 103
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPK-GCDLLAAAALPVAFGTS 134
            A+G + S  + VG  V  + A GSFA++ V       PVP    + L    L V+  T+
Sbjct: 104 VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 159
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 160 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 219
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 220 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 275
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 276 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 320

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 37  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 95
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIV---ADQFPVPK-GCDLLAAAALPVAFGTS 134
            A+G + S  + VG  V  + A GSFA++ V   +   PVP    + L    L V+  T+
Sbjct: 96  VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 151
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 152 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 211
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 212 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 267
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 268 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 312

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 29/286 (10%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           +  + LS+  P+P L     + VR +   +N ++     G+Y      PF  G +  G V
Sbjct: 16  REAVTLSRDCPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV 74
Query: 80  DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPK-GCDLLAAAALPVAFGTS 134
            A+G + S  + VG  V  + A GSFA++ V       PVP    + L    L V+  T+
Sbjct: 75  VALGLSASARYTVGQAVA-YMAPGSFAEYTVVPASIATPVPSVKPEYLT---LLVSGTTA 130
Query: 135 HVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDH 194
           +++L     LS G+                Q+ K     +I      EK  FLKSLG D 
Sbjct: 131 YISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR 190
Query: 195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-E 253
            ++   E V       LK    +GVDV+Y+ VGG +   ++  L    +++VIGF SG +
Sbjct: 191 PINYKTEPV----GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 246
Query: 254 IP---------VIPANIALVKNWTVHGL----YWGSYKIHRPHVLE 286
            P          +PA + L K+ +V G     Y   Y+    H+LE
Sbjct: 247 TPTGLSPVKAGTLPAKL-LKKSASVQGFFLNHYLSKYQAAMSHLLE 291

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 131/337 (38%), Gaps = 44/337 (13%)
Query: 24  VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVG 83
           +  K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G
Sbjct: 20  LFRKAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALG 76
Query: 84  PNVSNFKVGDTVCGFAALGSFAQFI---VADQFPVPKGCDLLAAAALPVAFGTSHVALVH 140
            +V  +++GD V  F    ++A+ +   V   + +P       AAA P+ F T++V L  
Sbjct: 77  DSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFE 136
Query: 141 RAQLSSGQXXXXXXXXXXXXXXXXQI-GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 199
            A L  G                 Q+   V   T+   A   +      S  V H+ D  
Sbjct: 137 VANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDS--VTHLFD-R 193
Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPA 259
           N   +  VK        +GVD++ D + G  T + L LL      ++ G ++       +
Sbjct: 194 NADYVQEVKRI----SAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKS 249
Query: 260 NIALVKNWTVHGLYWGSYKIHRPHVLED-------SLRELLLWAAKG---------LITI 303
             +  K+W      W   K++   + E+       SL  LL    +          LI +
Sbjct: 250 FFSFAKSW------WQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL 303
Query: 304 HISHTYSP--------SEANLAFSAIEDRKVIGKVMI 332
           +      P         E   A   I DR  IGK+++
Sbjct: 304 YNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 30/311 (9%)
Query: 41  RVRVKATSLNYANYLQILGKYQEKPPL-----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           +VR++ T++   N+L    +     PL     P V G + +  V+ VGP V++F VG+ V
Sbjct: 30  QVRLRNTAIG-VNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERV 88
Query: 96  CG-FAALGSFAQ---FIVADQFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQX 149
           C     LG+++Q   +       VPK  DL  +  A L +   T+   L    ++  G  
Sbjct: 89  CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDY 148
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
                             +  GAT+I      EK +  + LG  H ++ S +     V+E
Sbjct: 149 VLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVRE 208
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
                  KGVDV+YD +G    ++SL  L         G ASG    +   I +V++  V
Sbjct: 209 ITGG---KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASG----VADPIRVVEDLGV 261
Query: 270 HG-------LYWGSYKIHRPHVLEDSLRELLLWAAK-GLITIHISHTYSPSEANLAFSAI 321
            G         W  Y  +R  + E S  + L  A K G++   ++ T+   EA  A   +
Sbjct: 262 RGSLFITRPALW-HYMSNRSEIDEGS--KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYM 318
Query: 322 EDRKVIGKVMI 332
             R+ IG +++
Sbjct: 319 GGRQTIGSIVL 329

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 23/225 (10%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR+ ++A  +N+ + L  LG Y     L    GS+ +G V   GP V+    GD V G  
Sbjct: 241 VRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMI 296
Query: 100 ALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
              +F    VAD   V   P G     AA++P+ F T++ ALV  A L  G+        
Sbjct: 297 P-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355
Query: 157 XXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS-----VKEFL 211
                   Q+ +  GA + A A    + K+         V+LS E +  S      ++FL
Sbjct: 356 GGVGMAAIQLARHLGAEVYATA---SEDKW-------QAVELSREHLASSRTCDFEQQFL 405
Query: 212 KARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV 256
            A   +GVDV+ + + G+    SL++L  G + L +G      PV
Sbjct: 406 GATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPV 450

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 10  GDPTVSIHDEK--SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL 67
           G P +++H +K   P  L   E          V ++V A++LN A+ +Q  G+Y   P  
Sbjct: 4   GIPMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 68  PFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLA 123
             + G + SG V  +GP    ++K+GDT       G  AQ++   +    P+P+G  L  
Sbjct: 64  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 123
Query: 124 AAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEK 183
           AAA+P A+ T+   L     + +G                 Q+ ++ GA  +  A   +K
Sbjct: 124 AAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKK 183
Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
           ++  + LG     +   E    +  +F K     GV+++ D +GG   ++++  L    +
Sbjct: 184 LQMAEKLGAAAGFNYKKEDFSEATLKFTKG---AGVNLILDCIGGSYWEKNVNCLALDGR 240
Query: 244 ILVIGFASG 252
            ++ G   G
Sbjct: 241 WVLYGLMGG 249

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGF 98
           V ++V A++LN A+ +Q  G+Y   P    + G + SG V  +GP    ++K+GDT    
Sbjct: 52  VLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMAL 111
Query: 99  AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXX 155
              G  AQ++   +    P+P+G  L  AAA+P A+ T+   L     + +G        
Sbjct: 112 LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAG 171
Query: 156 XXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 215
                    Q+ ++ GA  +  A   +K++  + LG     +   E    +  +F K   
Sbjct: 172 LSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG-- 229
Query: 216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
             GV+++ D +GG   ++++  L    + ++ G   G
Sbjct: 230 -AGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGG 265

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 128/334 (38%), Gaps = 23/334 (6%)
Query: 8   KLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL 67
           K G+P   +  E   I     EP+        V VR+    +N ++ + I G Y  + PL
Sbjct: 12  KFGNPKDVLQVEYKNI-----EPL----KDNEVFVRMLVRPINPSDLIPITGAYAHRIPL 62
Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAA 124
           P +PG +  G V+ VG  VS   +G  V      G++ +++        P+P   D   A
Sbjct: 63  PNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTA 122
Query: 125 AALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKI 184
           A + +   T+ V       L                    Q+ ++    +IAV R  +  
Sbjct: 123 AQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182
Query: 185 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQI 244
           + L  LG  +V+D S   +  +V E        G D   D +GG    E    L      
Sbjct: 183 EELLRLGAAYVIDTSTAPLYETVMELTNG---IGADAAIDSIGGPDGNELAFSLRPNGHF 239
Query: 245 LVIGFASGEIPVIPANI---ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL-LWAAKGL 300
           L IG  SG I V  A I   A V     H  +W       P+  +++ R L+ L   + L
Sbjct: 240 LTIGLLSG-IQVNWAEIVTKAKVHANIFHLRHWNDEV--SPYKWQETFRHLIRLVENEQL 296
Query: 301 ITIHISHTYSPSEANLAFSAIED-RKVIGKVMIA 333
             + +  TY  ++   A   ++   K  GKV + 
Sbjct: 297 RFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLT 330

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 88  NFKVGDTVCGFAALGSFAQFIVA---------DQFPVPKGCDLLAAAALPVAFGTSHVAL 138
            F+ GD V G  ALG    FI            + P+P+    L    +     T++ AL
Sbjct: 89  GFQAGDYVNG--ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGM-----TAYFAL 141
Query: 139 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVD 197
           +   Q  +G+                QI ++ G  ++ +A GAEK +FL + LG D  +D
Sbjct: 142 LDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAID 201
Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGE 253
             NE +       LK    KG+DV +D VGG++    L  + + A+I++ G    + + E
Sbjct: 202 YKNEDLAAG----LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKE 257
Query: 254 IPVIPANI--ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 299
               PAN    LV    + G+    Y    P    + L+E+  W A+G
Sbjct: 258 AVRGPANYLSLLVNRARMEGMVVMDYAQRFP----EGLKEMATWLAEG 301

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 28/334 (8%)
Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS 73
           +  H    P VL   E  P   +   ++V  KA  +N+ +     G Y   P LP   G+
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLY-PPPSLPSGLGT 63
Query: 74  DYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQF--IVADQFPV-PKGCDLLAAAALPV 129
           + +G V  VG  V + K GD V    +ALG+++    I+AD+  + P       AAA  +
Sbjct: 64  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 130 AFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKS 189
              T +  L    ++   +                Q  K  GA +I     A+K +    
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 183
Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
            G   V++   E ++  +KE    +K++   V+YD VG    + SL  L     ++  G 
Sbjct: 184 AGAWQVINYREEDLVERLKEITGGKKVR---VVYDSVGRDTWERSLDCLQRRGLMVSFGN 240
Query: 250 ASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LEDSLRELLLWAAKGL 300
           +SG +  +   I   K         GS  + RP +         L ++  EL    A G+
Sbjct: 241 SSGAVTGVNLGILNQK---------GSLYVTRPSLQGYITTREELTEASNELFSLIASGV 291
Query: 301 ITIHIS--HTYSPSEANLAFSAIEDRKVIGKVMI 332
           I + ++    Y   +A  A   +E R   G  ++
Sbjct: 292 IKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 131/322 (40%), Gaps = 51/322 (15%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGK----YQEKPPLPFVPGSDYSGTVDAVGPN 85
           P P+   +  + ++V A SLN  +Y    G      + K  LP   G D+SG V  +G +
Sbjct: 27  PTPEYRKNQXL-IKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD 85
Query: 86  VSNFKVGDTVCGFAAL----GSFAQFIVADQFPVPKGCD---LLAAAALPVAFGTSHVAL 138
           V+N  +GD V G A        +A+++ A    + +  +    L AA+LP A G + +  
Sbjct: 86  VNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA-GLTALQA 144
Query: 139 VHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL 198
           +++A++  G                 Q+ K  G T+I  A       FLK+LG +  ++ 
Sbjct: 145 LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINY 203
Query: 199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP 258
             E  + ++           VD + D VGG +  +S+  L     I+        +P I 
Sbjct: 204 HEEDFLLAIS--------TPVDAVIDLVGGDVGIQSIDCLKETGCIV-------SVPTIT 248
Query: 259 A----NIALVKNWTVHGLYWGSYKIHRPHVL-----EDSLRELLLWAAKGLITIHISHTY 309
           A     +A  K+    GL    + I   H L     ED LR            I IS  +
Sbjct: 249 AGRVIEVAKQKHRRAFGL-LKQFNIEELHYLGKLVSEDKLR------------IEISRIF 295
Query: 310 SPSEANLAFSAIEDRKVIGKVM 331
             SEA  A   +E   V GK++
Sbjct: 296 QLSEAVTAHELLETGHVRGKLV 317

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 52/349 (14%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + + E  P + S   V VR+KA  + + +     G +  KP LP +PG +  G V
Sbjct: 10  KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80  DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
           + VGP V++ KVGD                      T+C      G++  G +A++  A 
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 168
                 +P       AA +  A  T++ AL  +   +                   Q  K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
             G  ++AV  G EK++  K LG D VV+   E     +KE +       V  +  P   
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
              + +   +  G   +++G    E+P IP    ++    + G   G+ K          
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 289 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 336
           L+E L +AA+G +   I     P E  N  F  +   ++ G+V++  +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 52/349 (14%)
Query: 20  KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
           K P+ + + E  P + S   V VR+KA  + + +     G +  KP LP +PG +  G V
Sbjct: 10  KEPLKIKEVEK-PTI-SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67
Query: 80  DAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQFIVAD 111
           + VGP V++ KVGD                      T+C      G++  G +A++  A 
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAA 127
Query: 112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK 168
                 +P       AA +  A  T++ AL  +   +                   Q  K
Sbjct: 128 ADYVVKIPDNLSFEEAAPIFCAGVTTYKAL--KVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
             G  ++AV  G EK++  K LG D VV+   E     +KE +       V  +  P   
Sbjct: 186 AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA-- 243
Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
              + +   +  G   +++G    E+P IP    ++    + G   G+ K          
Sbjct: 244 --FQSAYNSIRRGGACVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------D 291
Query: 289 LRELLLWAAKGLITIHISHTYSPSEA-NLAFSAIEDRKVIGKVMIAFDD 336
           L+E L +AA+G +   I     P E  N  F  +   ++ G+V++  +D
Sbjct: 292 LQEALQFAAEGKVKTIIE--VQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 142/354 (40%), Gaps = 54/354 (15%)
Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGS 73
           +H+   P+ +   +  P+L     V VR+    + + +   + G + E  +P LP+  G 
Sbjct: 21  LHEYNKPLRIEDVD-YPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH 79
Query: 74  DYSGTVDAVGPNVSNFKVGDTV---------------------C------GFAALGSFAQ 106
           +  G ++ V   V   + GD V                     C      G    G FA+
Sbjct: 80  ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 139
Query: 107 FIVADQFPV---PKGCD---LLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXX 160
           F+      V   PK      L+  A L  A  T++ A+   A+                 
Sbjct: 140 FMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLG 199
Query: 161 XXXXQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV 219
               Q+ KV   AT+IA+    EK+K  + LG DHVVD   +     VK+ ++  + +GV
Sbjct: 200 HIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD----PVKQVMELTRGRGV 255
Query: 220 DVLYDPVGGKLTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK 278
           +V  D VG + T + +  LL    +++++G+  GE+   P    +    +  G   G+Y 
Sbjct: 256 NVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELR-FPTIRVISSEVSFEGSLVGNYV 313
Query: 279 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
                     L EL+  A +G + + +   +   E N     +E  +V+G+ ++
Sbjct: 314 ---------ELHELVTLALQGKVRVEVD-IHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 72/137 (52%), Gaps = 19/137 (13%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HDE   + +    P P L     V VRV+A ++N ++  ++ G++    P  F+ G
Sbjct: 16  TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TKMRGQFAT--PWAFL-G 67
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCG--------FAALGSFAQFIVAD---QFPVPKGCDL 121
           +DY+GTV AVG +V++ +VGD V G            G+F+Q+ V        +PKG   
Sbjct: 68  TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 122 LAAAALPVAFGTSHVAL 138
             AAALP    T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 34  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 93
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI       + 
Sbjct: 94  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +    L 
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGEAKLAL- 272
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 284 VLEDSLRELLLWAAKGLIT 302
           +   +L +++ W  +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPL-------- 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI       + 
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 13  TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           TV+ HDE   + +    P P L     V VRV+A ++N ++   + G++    P  F+ G
Sbjct: 16  TVNDHDE---VTVWNAAPCPMLPRD-QVYVRVEAVAINPSD-TSMRGQFAT--PWAFL-G 67
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVAD---QFPVPKGCDL 121
           +DY+GTV AVG +V++ +VGD V G            G+F+Q+ V        +PKG   
Sbjct: 68  TDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSF 127
Query: 122 LAAAALPVAFGTSHVAL 138
             AAALP    T+ +A+
Sbjct: 128 EQAAALPAGISTAGLAM 144

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 34  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 93
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI       + 
Sbjct: 94  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 153
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 154 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 213
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +    L 
Sbjct: 214 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL- 272
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 273 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 332
Query: 284 VLEDSLRELLLWAAKGLIT 302
           +   +L +++ W  +G +T
Sbjct: 333 LKTSTLNQIIAWYEEGKLT 351

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 34/319 (10%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G Y  KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI       + 
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 16/208 (7%)
Query: 133 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 192
           T++  L+    +  G+                QI K+ G  ++  A   EKI +LK +G 
Sbjct: 132 TAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191
Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS- 251
           D      N   + S++E LK     G D  +D VGG+     L  +    +I + G  S 
Sbjct: 192 DAAF---NYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISV 248
Query: 252 ----GEIPVIPANIALV-KNWTVHGLYWGSYKIHRPH--VLEDSLRELLLWAAKGLITIH 304
                ++P  P+  +++ K   + G     + ++R    V E +LR+L+ W  +G I  H
Sbjct: 249 YNRMDQLPPGPSPESIIYKQLRIEG-----FIVYRWQGDVREKALRDLMKWVLEGKIQYH 303
Query: 305 ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
              T        AF  + +   +GK ++
Sbjct: 304 EHVTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 129/324 (39%), Gaps = 55/324 (16%)
Query: 16  IHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74
           +H   +P+ + + + P+P       V V+++A+ + + +     G +  KPPLPF+PG +
Sbjct: 12  VHAYGAPLRIEEVKVPLP---GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 68
Query: 75  YSGTVDAVGPNVSNFKVGD----------------------TVC------GFAALGSFAQ 106
             G V AVG  V+  K GD                      T+C      G++  G +A+
Sbjct: 69  GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAE 128
Query: 107 FIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXX 163
           +++AD   V   PK  +    A +  A  T +  L  +     GQ               
Sbjct: 129 YVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGL-KQTNARPGQ-WVAISGIGGLGHVA 186
Query: 164 XQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV-DVL 222
            Q  +  G  + A+     K++  + LG    V+   E  + +++     R + G   VL
Sbjct: 187 VQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQ-----RDIGGAHGVL 241
Query: 223 YDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 282
              V      +++ +   G  I ++G   G+ P  P    ++K   + G   G+      
Sbjct: 242 VTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPT-PIFDVVLKGLHIAGSIVGTRA---- 296
Query: 283 HVLEDSLRELLLWAAKGLI--TIH 304
                 L+E L +A +GL+  TIH
Sbjct: 297 -----DLQEALDFAGEGLVKATIH 315

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 34/319 (10%)
Query: 17  HDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKP--------PL 67
           H E   ++ +++  I   N +   V V+   + +N ++  QI G    KP          
Sbjct: 12  HGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTE 71
Query: 68  PFVP-GSDYSGTVDAVGPNVSNFKVGDTV----CGFA-----ALGSFAQFI------VAD 111
           P  P G++    V  VG NVS+ + GD V      F      ALG+   FI       + 
Sbjct: 72  PAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSK 131
Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX-XXXXXXXXXXXXXXXQIGKVC 170
               P G  +   A + V   T+++ L H  +L+ G+                 QIGK+ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 171 GATIIAVARGA----EKIKFLKSLGVDHVV--DLSNESVI-PSVKEFLKARKLKGVDVLY 223
               I+V R      E +  LK LG   V+  D +N     P++KE++K    +   +  
Sbjct: 192 NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE-AKLAL 250
Query: 224 DPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
           + VGGK +    + LN    +L  G  S +   IP ++ + KN+T  G +      +   
Sbjct: 251 NCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKE 310
Query: 284 VLEDSLRELLLWAAKGLIT 302
           +   +L +++ W  +G +T
Sbjct: 311 LKTSTLNQIIAWYEEGKLT 329

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 141/365 (38%), Gaps = 60/365 (16%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V R  G          +P+ + +  P+PQ      V+V+++A+ + + +     G 
Sbjct: 3   MKAAVVRAFG----------APLTIDEV-PVPQPGPGQ-VQVKIEASGVCHTDLHAADGD 50
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC-- 96
           +  KP LPF+PG +  G V AVG  VS  K GD                      T+C  
Sbjct: 51  WPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK 110
Query: 97  ----GFAALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQX 149
               G++  G + +++VAD   V   P     +  A +  A  T +  L        GQ 
Sbjct: 111 QQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQ- 168
Query: 150 XXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
                          Q  +  G  + AV     K+   + LG +  V+  +    P+   
Sbjct: 169 WVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAA-- 224
Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
           +L+        VL   V  K   +++ ++  G  I + G   G+    P    ++K  T+
Sbjct: 225 WLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGT-PIFDVVLKGITI 283
Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
            G   G+            L+E L +AA G +   +S T    + N  F  + + KV G+
Sbjct: 284 RGSIVGT---------RSDLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGR 333
Query: 330 VMIAF 334
           V++ F
Sbjct: 334 VVLDF 338

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF---VPG 72
           I D+ S + +   +P P   +   + V VKA S+N  +Y       +  PP      V G
Sbjct: 34  ITDDASLLDIELPKPAP---AGHDILVEVKAVSVNPVDY----KVRRSTPPDGTDWKVIG 86
Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQFPV---PKGCDLLAAAA 126
            D +G V AVGP+V+ F+ GD V    ++   G+ A+F + D+  V   PK  D   AAA
Sbjct: 87  YDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAA 146
Query: 127 LPVAFGTSHVALVHRAQLS-----SGQXXXXXXXXXXXXXXXXQIGKV-CGATIIAVARG 180
           LP+   T+  A   R  ++     +                  QI +     T+IA A  
Sbjct: 147 LPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206
Query: 181 AEKIKFLKSLGVDHVVDLS 199
            E  +++KSLG  HV+D S
Sbjct: 207 PETQEWVKSLGAHHVIDHS 225

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 46/303 (15%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNF 89
           P P+ N    + + VK + + + +     G +     LP V G + +G V  +G NV  +
Sbjct: 26  PKPKANE---LLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGW 82
Query: 90  KVGD----------------------------TVCGFAALGSFAQFIVADQFP---VPKG 118
           K+GD                             + G+   GSF Q+  AD      +P+G
Sbjct: 83  KIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQG 142
Query: 119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVA 178
            DL   A +  A  T + AL   A L +G                 Q  K  G  ++ + 
Sbjct: 143 TDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGID 201
Query: 179 RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 238
            G  K +  +S+G +  +D + E  I  V   LKA       V+   V     + S + +
Sbjct: 202 GGEGKEELFRSIGGEVFIDFTKEKDI--VGAVLKATDGGAHGVINVSVSEAAIEASTRYV 259
Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 298
                 +++G  +G          +VK+ ++ G Y G+             RE L + A+
Sbjct: 260 RANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---------RADTREALDFFAR 310
Query: 299 GLI 301
           GL+
Sbjct: 311 GLV 313

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 136/365 (37%), Gaps = 62/365 (16%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A V R  G P            L+  E PIPQ      ++V ++A+ + + +     G
Sbjct: 26  MKAAVVRAFGKP------------LTIDEVPIPQPGPGQ-IQVAIQASGVCHTDLHAAEG 72
Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD----------------------TVC- 96
            +  KP  PF+PG +  G V AVG  V + K GD                      T+C 
Sbjct: 73  DWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE 132
Query: 97  -----GFAALGSFAQFIVADQFPV---PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
                G++  G FA+++VAD   V   PK  D    A +  A  T +  L  +   +   
Sbjct: 133 EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGL--KVTDTKPG 190
Query: 149 XXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
                           Q  +  G  + AV     K+   + LG    V   N   +    
Sbjct: 191 DWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTV---NAKTVADPA 247
Query: 209 EFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNW 267
            +++     G   VL   V  K  +++L ++  G  + + G   G+ P+   N+ L    
Sbjct: 248 AYIRKETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVL-NGV 306
Query: 268 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
           TV G   G+            L+E L +AA G +   I  T    + N  F  +    + 
Sbjct: 307 TVRGSIVGTRL---------DLQESLDFAADGKVKATI-QTGKLEDINAIFDDMRQGNIE 356
Query: 328 GKVMI 332
           G++++
Sbjct: 357 GRIVM 361

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 111/306 (36%), Gaps = 68/306 (22%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
              ++A++++   +  + K   L A  A P+   G +    V +A L   +         
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
                  QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++   
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
           KGVD + D             LN+  + L          V P  +A    + + GL+   
Sbjct: 239 KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
              H P +              +     ++  A  G +   I+ T    EAN A   +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
            K IG+
Sbjct: 337 FKAIGR 342

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 111/306 (36%), Gaps = 68/306 (22%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
              ++A++++   +  + K   L A  A P+   G +    V +A L   +         
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
                  QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++   
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
           KGVD + D             LN+  + L          V P  +A    + + GL+   
Sbjct: 239 KGVDAVID-------------LNYSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
              H P +              +     ++  A  G +   I+ T    EAN A   +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
            K IG+
Sbjct: 337 FKAIGR 342

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 115/317 (36%), Gaps = 68/317 (21%)
Query: 22  PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
           P+ + + E  P    +  VR+++ ATSL + +   I  K+ E    P + G + +G V++
Sbjct: 22  PLCIEEVEVAPP--KAHEVRIQIIATSLCHTDATVIDSKF-EGLAFPVIVGHEAAGIVES 78
Query: 82  VGPNVSNFKVGDTV---------------------CG----------------------- 97
           +GP V+N K GD V                     CG                       
Sbjct: 79  IGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFT 138
Query: 98  --------FAALGSFAQFIVADQFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSS 146
                   F    +F+Q+ V     + K     +L     L   F T + A ++ A+++ 
Sbjct: 139 CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTP 198
Query: 147 GQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 206
           G                        + II +   +EK    K+LG      L+   +   
Sbjct: 199 GSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDC--LNPRDLHKP 256
Query: 207 VKEFLKARKLKGVDVLYDPVGGKLTKES---LKLLNWGAQILVIGFASGE--IPVIPANI 261
           ++E +      GVD   D  GG  T ++        WG+    IG A+G   + V P   
Sbjct: 257 IQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTF-IGVAAGSKGLTVFPEE- 314
Query: 262 ALVKNWTVHGLYWGSYK 278
            L+   T++G ++G +K
Sbjct: 315 -LIIGRTINGTFFGGWK 330

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-- 97
           V VRV  +S+NY + L  +   +     PFVPG D +G V  V      F+ GD V    
Sbjct: 33  VLVRVHYSSVNYKDGLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRFREGDEVIATG 90
Query: 98  -------FAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL-----S 145
                  F     +A+       P+PKG  L  A A+  A  T+ ++ +HR +       
Sbjct: 91  YEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS-IHRLEEHGLTPE 149
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV---DLSNES 202
            G                  + K  G T+ A    A +  +L+ LG   V+   D+  E 
Sbjct: 150 RGPVLVTGATGGVGSLAVSXLAK-RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVXAER 208
Query: 203 VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG-EIP 255
           + P  K+   A          DPVGG+     L    +G  + V G   G E+P
Sbjct: 209 IRPLDKQRWAA--------AVDPVGGRTLATVLSRXRYGGAVAVSGLTGGAEVP 254

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 137/345 (39%), Gaps = 51/345 (14%)
Query: 22  PIVLSKTEPIPQLNSSTA------VRVRVKATSLNYA-NYLQILGKYQEKPPLPFVPGSD 74
           PI+    E I ++++++       +R    AT+LN   + L +  K +E    P   G D
Sbjct: 45  PIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE---FPLTLGRD 101
Query: 75  YSGTVDAVGPNVSNFKVGDTVCGFAAL-----GSFAQFIVADQFPV---PKGCDLLAAAA 126
            SG V   G +V  FK GD V  +AA+     G+ ++F+V     V   PK      AA+
Sbjct: 102 VSGVVMECGLDVKYFKPGDEV--WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAAS 159
Query: 127 LPVAFGTSHVALVHRAQLS----SGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAE 182
           LP    T+  A+     L+    +G+                Q+ K   A + AV    +
Sbjct: 160 LPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QD 218
Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL-NWG 241
             + ++ LG D V+D  +     SV+E LK+  LK  D + D VGG     +   L  W 
Sbjct: 219 ASELVRKLGADDVIDYKS----GSVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWS 272
Query: 242 AQILV------------IGFASG--EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 287
               V            +G A G  +  V   + AL   W      W  +    P +  D
Sbjct: 273 GATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCL--D 330
Query: 288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
            + EL+     G I   I  T+  S+   AF  +E     GK +I
Sbjct: 331 DIAELV---DAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVI 372

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/306 (21%), Positives = 110/306 (35%), Gaps = 68/306 (22%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFP-VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXX 157
              ++A++++   +  + K   L A  A P+   G +    V +A L   +         
Sbjct: 122 FDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGG 181
Query: 158 XXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
                  QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++   
Sbjct: 182 GLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES--- 238
Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
           KGVD + D             LN   + L          V P  +A    + + GL+   
Sbjct: 239 KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVMVGLFGAD 276
Query: 277 YKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
              H P +              +     ++  A  G +   I+ T    EAN A   +E+
Sbjct: 277 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 324 RKVIGK 329
            K IG+
Sbjct: 337 FKAIGR 342

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 75/320 (23%)
Query: 21  SPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80
           SP+ + + E  P    +  VR++V AT + + +      K  +K   P V G + +G V+
Sbjct: 19  SPLCIEEIEVSPP--KACEVRIQVIATCVCHTDINATDPK--KKALFPVVLGHECAGIVE 74
Query: 81  AVGPNVSNFKVGDTV---------------------CG---------------------- 97
           +VGP V+NFK GD V                     CG                      
Sbjct: 75  SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134
Query: 98  ---------FAALGSFAQFIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
                    F  + SF+Q+ V   A+   V    +L     +   F + + A ++ A+++
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT 194
Query: 146 SGQXXXXXXXXXXXXXXXXQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
            G                    K+ GA+ IIA+    EK    K+LG      L+   + 
Sbjct: 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFPKAKALGATDC--LNPRELD 251
Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLK------LLNWGAQILVIGFASGEIPVIP 258
             V++ +      GVD   D  G   T ++LK      +L WG+   V+G    E+ +  
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAG---TAQTLKAAVDCTVLGWGS-CTVVGAKVDEMTIPT 307
Query: 259 ANIALVKNWTVHGLYWGSYK 278
            ++ L +  +++G ++G +K
Sbjct: 308 VDVILGR--SINGTFFGGWK 325

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/350 (20%), Positives = 130/350 (37%), Gaps = 76/350 (21%)
Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGSDYSGTVDAV 82
           PIP+   S  V ++++A  + +++     G++            LP   G + +G ++ V
Sbjct: 19  PIPKPKGSQ-VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEV 77
Query: 83  GPNVSNFKVGDTV----------CGFAALG-----------------SFAQFIVADQFP- 114
           G  V  +  GD V          C +  +G                 ++A++++   +  
Sbjct: 78  GDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKY 137
Query: 115 VPKGCDLLAAAALPVAF-GTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGK-VCGA 172
           + K   L A  A P+   G +    V +A L   +                QI K V GA
Sbjct: 138 LYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGA 197
Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
           TII V    E ++  K  G D+V++ S++  +  ++   +    KG D + D        
Sbjct: 198 TIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQG---KGADAVID-------- 246
Query: 233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR-- 290
                LN   + L I          P  +A    + + GL+    K H P +  + ++  
Sbjct: 247 -----LNNSEKTLSI---------YPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFI 292
Query: 291 -----------ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
                       ++  A  G +   ++ T    EAN A   +E+ K +G+
Sbjct: 293 GSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVGR 342

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 135/385 (35%), Gaps = 81/385 (21%)
Query: 11  DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYAN-------------YLQI 57
           DP  SIH ++ P+        P+L    A+ V V A+S+NY +             +L+ 
Sbjct: 71  DPRKSIHLDEVPV--------PELGPGEAL-VAVMASSVNYNSVWTSIFEPVSTFAFLER 121
Query: 58  LGKYQ---EKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTV------------------ 95
            GK     ++  LP+ + GSD +G V   GP V+ ++ GD V                  
Sbjct: 122 YGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDT 181
Query: 96  ------------CGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHR-- 141
                         F  L   A        P PK      AAA  +   T++  LV R  
Sbjct: 182 MLDPEQRIWGFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNG 241
Query: 142 AQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 201
           A +  G                 Q     GA  I V    +K +  +S+G + ++D + E
Sbjct: 242 AAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAE 301
Query: 202 SV-------IPSVKEF----LKARKLKG---VDVLYDPVGGKLTKESLKLLNWGAQILVI 247
                        KE+     + R+L G   +D++++  G +    S+ +   G  I   
Sbjct: 302 GYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTC 361
Query: 248 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 307
              SG +         +    + G ++ +Y+            E     AKG I   +S 
Sbjct: 362 ASTSGYMHEYDNRYLWMSLKRIIGSHFANYR---------EAYEANRLIAKGKIHPTLSK 412
Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
           TYS  E   A   +      GKV +
Sbjct: 413 TYSLEETGQAAYDVHRNLHQGKVGV 437

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/310 (20%), Positives = 113/310 (36%), Gaps = 70/310 (22%)
Query: 67  LPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------CGFAALG-------------- 102
           LP   G + +G ++ VG  V  +  GD V          C +  +G              
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 103 ---SFAQFIVADQFPVP---KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQXXXXXXXX 156
              ++A++++   +      +  + + AA L  +  T++ A V +A L   +        
Sbjct: 122 FDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRA-VRKASLDPTKTLLVVGAG 180
Query: 157 XXXXXXXXQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 215
                   QI K V GATII V    E ++  K  G D+V++ S +  +  ++   ++  
Sbjct: 181 GGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITES-- 238
Query: 216 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG 275
            KGVD + D             LN   + L          V P  +A    +   GL+  
Sbjct: 239 -KGVDAVID-------------LNNSEKTL---------SVYPKALAKQGKYVXVGLFGA 275
Query: 276 SYKIHRPHVL-------------EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 322
               H P +              +     +   A  G +   I+ T    EAN A   +E
Sbjct: 276 DLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKPXITKTXKLEEANEAIDNLE 335
Query: 323 DRKVIGKVMI 332
           + K IG+ ++
Sbjct: 336 NFKAIGRQVL 345

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 133 TSHVALVHRAQLSSGQXXXXXXXXXXXXXXXXQIGKVCGATIIAVARGAEKIKFLKSLGV 192
           T++  L+    +  G+                QI K+ G  ++      EK+ +L+ LG 
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGF 207
Query: 193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
           D V    N   + S++E LK     G D  +D VGG+ +   +  +    +I + G
Sbjct: 208 DVVF---NYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 34/270 (12%)
Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +AL   K  D  VS+H     +    TE +P+      V ++V  + +NY + L     
Sbjct: 5   FQALQAEKNAD-DVSVH-----VKTISTEDLPK----DGVLIKVAYSGINYKDGLAGKAG 54
Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQF--IVADQ 112
                  P + G D +GTV  V  N   F  GD V       G +  G  +++  +  D 
Sbjct: 55  GNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW 112
Query: 113 F-PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQXXXXXXXXXXXXXXXXQI 166
             P+P+   L  A     A  T+ ++ VHR + +      G                  +
Sbjct: 113 LVPLPQNLSLKEAXVYGTAGFTAALS-VHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXL 171
Query: 167 GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 226
            K  G  ++A     E   +LK LG   V+  S E V     + L  ++ +G     DPV
Sbjct: 172 NK-RGYDVVASTGNREAADYLKQLGASEVI--SREDVYDGTLKALSKQQWQGA---VDPV 225
Query: 227 GGKLTKESLKLLNWGAQILVIGF-ASGEIP 255
           GGK     L  + +G  + V G    GE+P
Sbjct: 226 GGKQLASLLSKIQYGGSVAVSGLTGGGEVP 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	344
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-124
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-118
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-105
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-97
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-97
3gms_A	340	Putative NADPH:quinone reductase; structural genom	8e-96
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	8e-94
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-93
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	7e-88
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-86
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	6e-85
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-84
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-79
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-76
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-73
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	4e-71
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	6e-69
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-66
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-65
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-62
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-62
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-61
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-57
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	7e-57
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-56
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-52
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	1e-50
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	4e-48
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	4e-45
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-40
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-40
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	6e-40
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-38
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	6e-36
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	6e-35
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-31
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-31
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	3e-31
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-30
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-30
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	4e-30
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-30
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	8e-30
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	9e-30
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	6e-28
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-25
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-25
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	4e-25
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	2e-22
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-22
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	5e-22
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	6e-21
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	3e-20
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	5e-20
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	6e-20
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	2e-19
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-19
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	2e-18
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	8e-18
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	4e-17
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-16
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	6e-14
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-13
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	4e-13
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	9e-13
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	5e-11
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-10
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	7e-10
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-05
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	4e-05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-05
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-04

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  358 bits (922), Expect = e-124
 Identities = 110/336 (32%), Positives = 164/336 (48%), Gaps = 21/336 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+  + L  P            L  T+   P       V V VKA  + + +YL   G
Sbjct: 22  MKAIQAQSLSGPEG----------LVYTDVETPGA-GPNVVVVDVKAAGVCFPDYLMTKG 70

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           +YQ K   PFVPG + +G V +     S  K GD V  F  +G +A+ +        P P
Sbjct: 71  EYQLKMEPPFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTP 129

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
              D   A AL   + T + A   R QL +G+ +LVLGAAGG+G AA+QI K  GA +IA
Sbjct: 130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIA 189

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           V       +F+KS+G D V+ L  E    +V+E        GVD++ DP+GG    ++++
Sbjct: 190 VVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGA---GVDMVVDPIGGPAFDDAVR 245

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
            L    ++LV+GFA+G IP I  N  L++N ++ G+ WG +       L ++   L    
Sbjct: 246 TLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLV 305

Query: 297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           A+G +   +S     SE   A     D KV GK+++
Sbjct: 306 AEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVL 340

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  344 bits (884), Expect = e-118
 Identities = 86/343 (25%), Positives = 138/343 (40%), Gaps = 25/343 (7%)

Query: 1   MEALVCRKLGDPT--VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL 58
           + ALV    GDP   V + + +                 + VRV++ A  +N ++   I 
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELA------AVRG-----SDVRVKMLAAPINPSDINMIQ 75

Query: 59  GKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-FAALGSFAQFIVADQ---FP 114
           G Y   P LP V G++    V AVG NV+  K GD V    A LG++    V  +     
Sbjct: 76  GNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQ 135

Query: 115 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 174
           VP    L +AA L V   T++  L+   QL  G  ++   +  GVG A +QI    G   
Sbjct: 136 VPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRT 195

Query: 175 IAVARGAEKI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 230
           I V R    I      LKSLG +HV+             F   + +    +  + VGGK 
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF---KDMPQPRLALNCVGGKS 252

Query: 231 TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHRPHVLEDSL 289
           + E L+ L  G  ++  G  + +  V   ++ + K+  + G +   + K H P   ++ +
Sbjct: 253 STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI 312

Query: 290 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             L     +G +T          +   A  A     +  K ++
Sbjct: 313 LTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  312 bits (802), Expect = e-105
 Identities = 79/369 (21%), Positives = 140/369 (37%), Gaps = 43/369 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A++  + G+P   +  +   I          L +   V V+   + +N ++  QI G 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEI------DDDNL-APNEVIVKTLGSPVNPSDINQIQGV 56

Query: 61  YQEKPPL---------PFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-FAALGSFAQFIVA 110
           Y  KP               G++    V  VG NVS+ + GD V       G++    + 
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 111 DQ--------------FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL-GA 155
           +                  P G  +   A + V   T+++ L H  +L+ G+   +  G 
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGG 176

Query: 156 AGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNES---VIPSVK 208
              VG  A QIGK+     I+V R      E +  LK LG   V+     +     P++K
Sbjct: 177 TSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIK 236

Query: 209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 268
           E++K        +  + VGGK +    + LN    +L  G  S +   IP ++ + KN+T
Sbjct: 237 EWIKQSG-GEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFT 295

Query: 269 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED---RK 325
             G +      +   +   +L +++ W  +G +T   S               +D     
Sbjct: 296 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANS 355

Query: 326 VIGKVMIAF 334
             GK +I +
Sbjct: 356 KDGKQLITY 364

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  289 bits (742), Expect = 3e-97
 Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 38/335 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V ++LG P           ++   EP  +      V +RV+A  LN+A++L  LG 
Sbjct: 1   MKAWVLKRLGGPLE---------LVDLPEPEAEEGE---VVLRVEAVGLNFADHLMRLGA 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPK 117
           Y  +   PF+PG +  G V            G         G  A+ +   +    P+P+
Sbjct: 49  YLTRLHPPFIPGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPE 97

Query: 118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV 177
           G     AAA PV+F T+++AL  RAQ   G+ +LV  AAG +G AAVQ+ +  G  ++A 
Sbjct: 98  GLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA 156

Query: 178 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 237
           A   EK+    +LG +     +        +    A+   G+D++ +  G ++ + SL L
Sbjct: 157 ASRPEKLALPLALGAEEAATYAEV-----PER---AKAWGGLDLVLEVRGKEVEE-SLGL 207

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L  G +++ IG A GE+  IP    + +N  V G +W +  +    ++E++L  LL    
Sbjct: 208 LAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG-FWLTPLLREGALVEEALGFLLPRLG 266

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
              +   +   +  +EA  AF A+ DR   GKV++
Sbjct: 267 -RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV 300

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  289 bits (743), Expect = 8e-97
 Identities = 70/343 (20%), Positives = 127/343 (37%), Gaps = 17/343 (4%)

Query: 1   MEALVCRKLGDP--TVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQI 57
           M+AL+    G          E     L +    +P    S  V ++V   S+N ++   I
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPS-QVLIKVNLASINPSDVAFI 69

Query: 58  LGKYQEKPPLPFVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFAAL---GSFAQFIVADQ- 112
            G+Y +        G +  GT+ A G    +   VG  V     L   GS+A++ VA+  
Sbjct: 70  KGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAA 129

Query: 113 --FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC 170
              P+         AA+ V   T+  A+    +    +  ++   A  +    + + K  
Sbjct: 130 ACIPLLDTVRDEDGAAMIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEE 188

Query: 171 GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 230
           G   I   R  E+I  LK +G  HV++        +++E +KA       +  D V G L
Sbjct: 189 GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAE---QPRIFLDAVTGPL 245

Query: 231 TKESLKLLNWGAQILVIGFASGEIPVI-PANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 289
                  +   A+ ++ G    +  VI      + ++  + G +   +          ++
Sbjct: 246 ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAI 305

Query: 290 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
            E     + G  +  ++     +EA  A+   E  K  GKV I
Sbjct: 306 LEAQKRFSDGRWSTDVTAVVPLAEAI-AWVPAELTKPNGKVFI 347

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  287 bits (736), Expect = 8e-96
 Identities = 77/340 (22%), Positives = 130/340 (38%), Gaps = 23/340 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + +   K G+P           VL      I  L  +  V VR+    +N ++ + I G
Sbjct: 5   GKLIQFHKFGNPKD---------VLQVEYKNIEPLKDN-EVFVRMLVRPINPSDLIPITG 54

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
            Y  + PLP +PG +  G V+ VG  VS   +G  V      G++ +++        P+P
Sbjct: 55  AYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIP 114

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
              D   AA + +   T+ V       L    VLLV      +G    Q+ ++    +IA
Sbjct: 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIA 174

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
           V R  +  + L  LG  +V+D S   +  +V E        G D   D +GG    E   
Sbjct: 175 VTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNG---IGADAAIDSIGGPDGNELAF 231

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY--KIHRPHVLEDSLRELLL 294
            L      L IG  SG    +     + K      ++   +      P+  +++ R L+ 
Sbjct: 232 SLRPNGHFLTIGLLSG--IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIR 289

Query: 295 WAAKGLIT-IHISHTYSPSEANLAFSAIED-RKVIGKVMI 332
                 +  + +  TY  ++   A   ++   K  GKV +
Sbjct: 290 LVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFL 329

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  282 bits (724), Expect = 8e-94
 Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 22/337 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V        + L     +P       V ++V A  +N        G 
Sbjct: 30  MRAVRVFEFGGPEV--------LKLRSDIAVPIP-KDHQVLIKVHACGVNPVETYIRSGT 80

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAALGSFAQFIVADQ---FPVP 116
           Y  KP LP+ PGSD +G ++AVG N S FK GD V       G +A++ +A     + +P
Sbjct: 81  YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLP 140

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
           +  D    AA+ + + T++ AL+H A + +G+ +LV GA+GGVG+AA QI +  G  I+ 
Sbjct: 141 EKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILG 200

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
            A   E  K +   G   V +    + I  +K+++     KG+D++ + +      + L 
Sbjct: 201 TAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE---KGIDIIIEMLANVNLSKDLS 257

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
           LL+ G +++V+G   G I + P +  + K  ++ G+   S         +     L    
Sbjct: 258 LLSHGGRVIVVGS-RGTIEINPRDT-MAKESSIIGVTLFSST---KEEFQQYAAALQAGM 312

Query: 297 AKGLITIHISHTYSPSEANLAFSA-IEDRKVIGKVMI 332
             G +   I   Y   +   A    I      GK+++
Sbjct: 313 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  281 bits (721), Expect = 2e-93
 Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 39/359 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V    G              L      +P+      +++RVKA  LN+ + +   G
Sbjct: 4   MRAVVLAGFGGLNK----------LRLFRKAMPEP-QDGELKIRVKACGLNFIDLMVRQG 52

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
                P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +       + +P
Sbjct: 53  NIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIP 112

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
                  AAA P+ F T++V L   A L  G  +LV  A GGVG A  Q+        + 
Sbjct: 113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVF 172

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
                 K + +K     H+ D  N   +  VK        +GVD++ D + G  T + L 
Sbjct: 173 GTASTFKHEAIKDSV-THLFD-RNADYVQEVKRISA----EGVDIVLDCLCGDNTGKGLS 226

Query: 237 LLNWGAQILVIGFASG----------------EIPVIPANIALVKNWTVHGLYWGS--YK 278
           LL      ++ G ++                 ++  +       +N  + G    +  +K
Sbjct: 227 LLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFK 286

Query: 279 IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM 337
             R  ++   + +L+    +  I   +   ++  E   A   I DR  IGK+++  +  
Sbjct: 287 QGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  266 bits (683), Expect = 7e-88
 Identities = 100/363 (27%), Positives = 156/363 (42%), Gaps = 54/363 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M A+V R  G P V          L   + P+P+      VRVR+KA +LN+ +     G
Sbjct: 1   MRAVVMRARGGPEV----------LEVADLPVPEP-GPKEVRVRLKAAALNHLDVWVRKG 49

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL------------------ 101
               K PLP V G+D SG VDAVGP V  F  GD V     L                  
Sbjct: 50  VASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPR 109

Query: 102 ---------GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
                    G++A+++V  +    P PK      AAA+P+ F T+   +V +  +  G  
Sbjct: 110 YQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDD 169

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           +LV+ A  GV VAA+QI K+ GA +IA A   +K++  K+LG D  V+ ++      V+ 
Sbjct: 170 VLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRR 229

Query: 210 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTV 269
               +   G D + D  G    +  +K    G +I + G +SG    +P      +  ++
Sbjct: 230 LTGGK---GADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSI 286

Query: 270 HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 329
            G    S         +  L  +L +  +G +   +        A      +E+R+V GK
Sbjct: 287 LGSTMAS---------KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGK 337

Query: 330 VMI 332
           V++
Sbjct: 338 VVL 340

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  263 bits (674), Expect = 3e-86
 Identities = 98/362 (27%), Positives = 147/362 (40%), Gaps = 54/362 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+      +            P  L   E P+P+      + VR  A SLNY + L +  
Sbjct: 28  MQEWSTETVA-----------PHDLKLAERPVPEA-GEHDIIVRTLAVSLNYRDKLVLET 75

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC----------------------- 96
                   PFVP SD SG V+AVG +V+ F+ GD V                        
Sbjct: 76  GMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYET 135

Query: 97  -GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
            G A  G  ++++V  +      PK  D   A+ LP A  T+  ALV +  L +G  ++V
Sbjct: 136 LGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV 195

Query: 153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 212
            G  GGV +  +QI K  GA +I  +   EK+    +LG DH ++   E  +  V     
Sbjct: 196 QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTG 254

Query: 213 ARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGL 272
            R   G D + +  GG    +SLK +    +I VIG   G     P    L+K+  V G+
Sbjct: 255 DR---GADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI 311

Query: 273 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             G            +L +L+    +  +   I   Y  +E   A + ++ R   GKV+I
Sbjct: 312 SVGH---------RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLD-RGPFGKVVI 361

Query: 333 AF 334
            F
Sbjct: 362 EF 363

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  259 bits (665), Expect = 6e-85
 Identities = 85/325 (26%), Positives = 140/325 (43%), Gaps = 11/325 (3%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V +     P V+   + P+P       V VR +A  +N  +  Q  G Y        + G
Sbjct: 32  VDLKSFGGPDVMVIGKRPLPVA-GEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILG 90

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
            + SG +  VGP VS + VGD VCG A  G++A++ +       P PKG D + AAALP 
Sbjct: 91  LELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPE 150

Query: 130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 189
            F T    L   A L+ G+ +L+ G   G+G  A+Q+ +  GA + A A    K +  + 
Sbjct: 151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER 210

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 249
           LG    ++  +E     +K        +GVD++ D +G    + ++  L     + +I F
Sbjct: 211 LGAKRGINYRSEDFAAVIKAE----TGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAF 266

Query: 250 ASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL-WAAKGLITIHISH 307
             G +   +  +  +VK  TV G             + D L   +      G +   I  
Sbjct: 267 LGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326

Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
            ++  +   A   +E+   +GKVM+
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVML 351

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  257 bits (658), Expect = 8e-84
 Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 39/353 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+ LV  +L        + +  + LS+  P+P       + VR +   +N ++     G+
Sbjct: 24  MQKLVVTRLS------PNFREAVTLSRDCPVPLP-GDGDLLVRNRFVGVNASDINYSAGR 76

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
           Y      PF  G +  G V A+G + S  + VG  V   A  GSFA++ V       PVP
Sbjct: 77  YDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP-GSFAEYTVVPASIATPVP 135

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
                     L V+  T++++L     LS G+ +LV  AAGG G  A+Q+ K     +I 
Sbjct: 136 SVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193

Query: 177 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 236
                EK  FLKSLG D  ++   E     V   LK    +GVDV+Y+ VGG +   ++ 
Sbjct: 194 TCSSDEKSAFLKSLGCDRPINYKTE----PVGTVLKQEYPEGVDVVYESVGGAMFDLAVD 249

Query: 237 LLNWGAQILVIGFASGEIPVIPANIA---------LVKNWTVHGLYWGSYKIHRPHVLED 287
            L    +++VIGF SG       +           L K+ +V G +   Y          
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ----A 305

Query: 288 SLRELLLWAAKGLITIHI--------SHTYSPSEANLAFSAIEDRKVIGKVMI 332
           ++  LL     G +   +                   A + +   K  GK+++
Sbjct: 306 AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  245 bits (627), Expect = 2e-79
 Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 14/332 (4%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           V       P  L   E   P       V ++V A++LN A+ +Q  G+Y   P    + G
Sbjct: 26  VHFDKPGGPENLYVKEVAKPSP-GEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILG 84

Query: 73  SDYSGTVDAVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP 128
            + SG V  +GP    ++K+GDT       G  AQ++   +    P+P+G  L  AAA+P
Sbjct: 85  LEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIP 144

Query: 129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 188
            A+ T+   L     + +G  +L+     GVG AA+Q+ ++ GA  +  A   +K++  +
Sbjct: 145 EAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE 204

Query: 189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIG 248
            LG     +   E    +  +F K     GV+++ D +GG   ++++  L    + ++ G
Sbjct: 205 KLGAAAGFNYKKEDFSEATLKFTKGA---GVNLILDCIGGSYWEKNVNCLALDGRWVLYG 261

Query: 249 FASG-EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRE----LLLWAAKGLITI 303
              G +I     +  L K  ++      S       +L ++  E             +  
Sbjct: 262 LMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLP 321

Query: 304 HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 335
            +   Y  +E   A   +E  K IGK+++   
Sbjct: 322 VLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  241 bits (617), Expect = 1e-76
 Identities = 82/395 (20%), Positives = 138/395 (34%), Gaps = 81/395 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A +  +  DP  SIH +  P+      P           V V A+S+NY +    + +
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPV------PELG---PGEALVAVMASSVNYNSVHTSIFE 93

Query: 61  Y----------------QEKPPLPF-VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-- 101
                             ++  LP+ V GSD +G V   GP V+ ++ GD V        
Sbjct: 94  PLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVE 153

Query: 102 -------------------------GSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGT 133
                                    G  A+  +       P P       AAA  +   T
Sbjct: 154 LESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNST 213

Query: 134 SHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 191
           ++  LV R  A +  G  +L+ GA+GG+G  A Q     GA  I V    +K +  +++G
Sbjct: 214 AYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMG 273

Query: 192 VDHVVDLSNESVIPSVKEFL-----------KARKL---KGVDVLYDPVGGKLTKESLKL 237
            + ++D + E       E             + R+L   + +D++++  G +    S+ +
Sbjct: 274 AEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFV 333

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
              G  I      SG +         +    + G ++ +Y             E     A
Sbjct: 334 TRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY---------REAWEANRLIA 384

Query: 298 KGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           KG I   +S  YS  +   A   +      GKV +
Sbjct: 385 KGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV 419

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  232 bits (592), Expect = 5e-73
 Identities = 81/397 (20%), Positives = 139/397 (35%), Gaps = 75/397 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPI-VLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQIL 58
             AL  R           +K     L   E P+P+L     V V V A+S+NY      +
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAP-DEVLVAVMASSINYNTVWSAM 83

Query: 59  GKYQEK-----------------PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101
            +                          V GSD SG V   G  V  +K GD V    A 
Sbjct: 84  FEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH 143

Query: 102 ---------------------------GSFAQFIVADQ---FPVPKGCDLLAAAALPVAF 131
                                      G  A++ V       P P       AA  P+  
Sbjct: 144 VDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 132 GTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS 189
           GT++  LV    AQ+  G ++L+ GA+GG+G  A+Q  K  G   +AV   A+K   +++
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKL--------------KGVDVLYDPVGGKLTKESL 235
           LG D V++ +   +   + +  +                  +  D++++  G      S+
Sbjct: 264 LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSV 323

Query: 236 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLW 295
            +   G  ++  G +SG +         +K   + G +  ++         +  +     
Sbjct: 324 IVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH---------EEQQATNRL 374

Query: 296 AAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
              G +   +S  Y  +EA  A   ++  + +GKV +
Sbjct: 375 FESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAV 411

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  223 bits (571), Expect = 4e-71
 Identities = 96/340 (28%), Positives = 147/340 (43%), Gaps = 26/340 (7%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + ++  ++G   V          +   + P+P + S   + ++ K T +NY       G
Sbjct: 9   QKVILIDEIGGYDV----------IKYEDYPVPSI-SEEELLIKNKYTGVNYIESYFRKG 57

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIV---ADQ-FPV 115
            Y      P+V G + SGTV A G  V+NF+VGD V  + +  +FAQ+           +
Sbjct: 58  IY--PCEKPYVLGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKL 114

Query: 116 PKGCD---LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
           PKG     L   AA  +   T+         +  G  +L+  AAGGVG+   Q+ K+ GA
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA 174

Query: 173 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 232
             IAVA   EK+K  K  G +++++ S E ++  V +F      KGVD  +D VG    +
Sbjct: 175 HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNG---KGVDASFDSVGKDTFE 231

Query: 233 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLREL 292
            SL  L      +  G ASG IP         KN T+       Y I  P   +    E 
Sbjct: 232 ISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGY-IADPEEWKYYSDEF 290

Query: 293 LLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
                   + I I  TY   +   A + IE RK +GK+++
Sbjct: 291 FGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  217 bits (556), Expect = 6e-69
 Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 44/344 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+   + G P V          L   + P P+      + ++V A SLN  +Y    G
Sbjct: 7   MKAIQFDQFGPPKV----------LKLVDTPTPEYRK-NQMLIKVHAASLNPIDYKTRNG 55

Query: 60  KYQEKP----PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL----GSFAQFIVAD 111
                      LP   G D+SG V  +G +V+N  +GD V G A        +A+++ A 
Sbjct: 56  SGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCAS 115

Query: 112 QF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
                   +    L AA+LP A  T+  AL ++A++  G V+L+   AGGVG  A+Q+ K
Sbjct: 116 PDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAK 174

Query: 169 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
             G T+I  A       FLK+LG +  ++   E  + ++           VD + D VGG
Sbjct: 175 QKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIST--------PVDAVIDLVGG 225

Query: 229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
            +  +S+  L     I+ +   +    +  A     +             + + ++  + 
Sbjct: 226 DVGIQSIDCLKETGCIVSVPTITAGRVIEVAKQKHRR---------AFGLLKQFNI--EE 274

Query: 289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
           L  L    ++  + I IS  +  SEA  A   +E   V GK++ 
Sbjct: 275 LHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  210 bits (538), Expect = 3e-66
 Identities = 94/338 (27%), Positives = 137/338 (40%), Gaps = 22/338 (6%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            + +    +G P V          L   +          AV VR KA  LN+ +     G
Sbjct: 2   AKRIQFSTVGGPEV----------LEYVDFEPEAP-GPQAVVVRNKAIGLNFIDTYYRSG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQ---FPV 115
            Y   P LP   G++ +G V+AVG  V+ FKVGD V  G   LG++++  V  +     +
Sbjct: 51  LYP-APFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKL 109

Query: 116 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII 175
                   AAAL +   T    L    Q+  G+++L   AAGGVG  A Q  K  GA +I
Sbjct: 110 ADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLI 169

Query: 176 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 235
                 EK    K+LG    +D S+E V   V E       K   V+YD VG      SL
Sbjct: 170 GTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDG---KKCPVVYDGVGQDTWLTSL 226

Query: 236 KLLNWGAQILVIGFASGEIPVIPANIALVKN-WTVHGLYWGSYKIHRPHVLEDSLRELLL 294
             +     ++  G ASG +  +   I   K+   V     GSY  +    L+    EL  
Sbjct: 227 DSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSY-ANNAQNLQTMADELFD 285

Query: 295 WAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             A G + +     Y+  +A  A   +  R+  G  ++
Sbjct: 286 MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTIL 323

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  209 bits (533), Expect = 2e-65
 Identities = 85/335 (25%), Positives = 137/335 (40%), Gaps = 28/335 (8%)

Query: 14  VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPG 72
             + +   P VL +    PQ  +   V V+++A+  N  +     G+    + PLP + G
Sbjct: 11  AVVEEANGPFVL-RKLARPQP-APGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAA-----LGSFAQFIVADQ---FPVPKGCDLLAA 124
            D +GTV AVGP V +F+VGD V G         G+ AQF   D       P    +  A
Sbjct: 69  MDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQA 128

Query: 125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI 184
           + LP+ F T+   LV RAQ+  GQ +L+ G  GGVG  A+QI    GA + A A     +
Sbjct: 129 SVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDL 187

Query: 185 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQI 244
           ++++ LG   +                +    +G D++YD +GG +   S   +     +
Sbjct: 188 EYVRDLGATPIDASREP-----EDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHV 242

Query: 245 LVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS--LRELLLWAAKGLIT 302
           +                   K  T  G++     +    +      LRE       G + 
Sbjct: 243 VSCLGWGTH----KLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA 298

Query: 303 IHI-SHTYSPSEANLAFSAIEDR----KVIGKVMI 332
             +   T+S +E   A+ A+  R    +  GK+ I
Sbjct: 299 PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  202 bits (515), Expect = 1e-62
 Identities = 88/350 (25%), Positives = 138/350 (39%), Gaps = 40/350 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           + A V  K G P                E  +        VR+R  A  +N+ +     G
Sbjct: 2   VMAAVIHKKGGPDN----------FVWEEVKVGSP-GPGQVRLRNTAIGVNFLDTYHRAG 50

Query: 60  KYQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQ---F 113
                     P V G + +  V+ VGP V++F VG+ VC     LG+++Q  +       
Sbjct: 51  IPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLI 110

Query: 114 PVPKGCDLLAA--AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 171
            VPK  DL     A L +   T+   L    ++  G  +L+  AAGG+G   V   +  G
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG 170

Query: 172 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 231
           AT+I      EK +  + LG  H ++ S +     V+E       KGVDV+YD +G    
Sbjct: 171 ATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGG---KGVDVVYDSIGKDTL 227

Query: 232 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV------- 284
           ++SL  L         G ASG    I     L           GS  I RP +       
Sbjct: 228 QKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVR--------GSLFITRPALWHYMSNR 279

Query: 285 --LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             +++  + L      G++   ++ T+   EA  A   +  R+ IG +++
Sbjct: 280 SEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVL 329

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  201 bits (514), Expect = 3e-62
 Identities = 84/367 (22%), Positives = 133/367 (36%), Gaps = 51/367 (13%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN---------- 50
             A V  K G   V        +  ++   +P ++    V V+V A S+N          
Sbjct: 22  SMAWVIDKYGKNEV--------LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGY 73

Query: 51  ----YANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---ALGS 103
                      L    +    P   G D SG V   G +V  FK GD V         G+
Sbjct: 74  GATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGT 133

Query: 104 FAQFIVADQF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQL----SSGQVLLVLGAA 156
            ++F+V         PK      AA+LP    T+  A+     L     +G+ +L+LGA+
Sbjct: 134 LSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGAS 193

Query: 157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
           GGVG  A+Q+ K   A + AV    +  + ++ LG D V+D  + SV   +K       L
Sbjct: 194 GGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS------L 246

Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS 276
           K  D + D VGG     +   L   +    +   +  +  +   + +       G+  GS
Sbjct: 247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNM-DRLGIADGMLQTGVTVGS 305

Query: 277 YKIHRPHVLE-----------DSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 325
             +                    L ++      G I   I  T+  S+   AF  +E   
Sbjct: 306 KALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGH 365

Query: 326 VIGKVMI 332
             GK +I
Sbjct: 366 ARGKTVI 372

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  198 bits (505), Expect = 2e-61
 Identities = 85/348 (24%), Positives = 134/348 (38%), Gaps = 40/348 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
              +   K G P V          L   E       +   ++V  KA  +N+ +     G
Sbjct: 2   ATRIEFHKHGGPEV----------LQAVEFTPADP-AENEIQVENKAIGINFIDTYIRSG 50

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC-GFAALGSFAQFIVADQ---FPV 115
            Y   P LP   G++ +G V  VG  V + K GD V    +ALG+++            +
Sbjct: 51  LYPP-PSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL 109

Query: 116 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII 175
           P       AAA  +   T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I
Sbjct: 110 PAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLI 169

Query: 176 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 235
                A+K +     G   V++   E ++  +KE       K V V+YD VG    + SL
Sbjct: 170 GTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGG---KKVRVVYDSVGRDTWERSL 226

Query: 236 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV---------LE 286
             L     ++  G +SG +  +   I   K         GS  + RP +         L 
Sbjct: 227 DCLQRRGLMVSFGNSSGAVTGVNLGILNQK---------GSLYVTRPSLQGYITTREELT 277

Query: 287 DSLRELLLWAAKGLITIHIS--HTYSPSEANLAFSAIEDRKVIGKVMI 332
           ++  EL    A G+I + ++    Y   +A  A   +E R   G  ++
Sbjct: 278 EASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  188 bits (480), Expect = 1e-57
 Identities = 60/338 (17%), Positives = 105/338 (31%), Gaps = 32/338 (9%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           ME          T S+      I      P    +    + V+ +A  +N  ++  I   
Sbjct: 2   MEQHQVWAYQTKTHSVTLNSVDI------PALAADD---ILVQNQAIGINPVDWKFIKAN 52

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQ---FP 114
                    VPG D +G +  VG  V +  +G  V    +L   GSFA+F V +      
Sbjct: 53  PIN-WSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMT 111

Query: 115 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 174
           +P       AAALP    T+  A   +  L+  + +L+    G V     Q+    G  +
Sbjct: 112 LPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLI-VGFGAVNNLLTQMLNNAGYVV 169

Query: 175 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 234
             V+  +         GV H+    ++               +    ++D V  +     
Sbjct: 170 DLVSA-SLSQALAAKRGVRHLYREPSQVT-------------QKYFAIFDAVNSQNAAAL 215

Query: 235 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 294
           +  L     I+ I               +  +    G            +L      LL 
Sbjct: 216 VPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT 275

Query: 295 WAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             A+G + I     +   +   A    E  K+   + +
Sbjct: 276 LIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  187 bits (477), Expect = 7e-57
 Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 67/372 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNY-------A 52
           M A+   ++G P            LS  E  +P+      V ++V+A  + +        
Sbjct: 1   MRAVRLVEIGKP------------LSLQEIGVPKP-KGPQVLIKVEAAGVCHSDVHMRQG 47

Query: 53  NYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------C------ 96
            +  +         LP   G + +G ++ VG  V  +  GD V          C      
Sbjct: 48  RFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIG 107

Query: 97  -----------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRA 142
                      G    G++A++++          +  + + AA L  +  T++ A+  +A
Sbjct: 108 EEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKA 166

Query: 143 QLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE 201
            L   + LLV+GA GG+G  AVQI K V GATII V    E ++  K  G D+V++ S +
Sbjct: 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ 226

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPAN 260
                + E  +  + KGVD + D    + T     K L    + +++G    ++    A 
Sbjct: 227 DP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLH-YHAP 282

Query: 261 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSA 320
           +  +      G   G+               ++  A  G +   I+ T    EAN A   
Sbjct: 283 LITLSEIQFVGSLVGNQS---------DFLGIMRLAEAGKVKPMITKTMKLEEANEAIDN 333

Query: 321 IEDRKVIGKVMI 332
           +E+ K IG+ ++
Sbjct: 334 LENFKAIGRQVL 345

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  185 bits (472), Expect = 3e-56
 Identities = 67/336 (19%), Positives = 131/336 (38%), Gaps = 32/336 (9%)

Query: 21  SPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79
              +       IP+      + V++++ S+N  +  Q L         P V G D  G V
Sbjct: 16  DGNLFKTFNLDIPEP-KVHEILVKIQSISVNPVDTKQRLMDV---SKAPRVLGFDAIGVV 71

Query: 80  DAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQFPV---PKGCDLLAAAALPVAFGT 133
           ++VG  V+ F  GD V    +    GS A++ + ++  V   PK      A +LP+   T
Sbjct: 72  ESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGIT 131

Query: 134 SHVALVHRAQLS------SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL 187
           ++  L     +S       G+ LL++  AGGVG  A QI K  G  +I  A   E I++ 
Sbjct: 132 AYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191

Query: 188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILV 246
           K +G D V++     +        K + ++ VD ++          + ++L+     I  
Sbjct: 192 KKMGADIVLNHKESLL-----NQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIAT 246

Query: 247 IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE---DSLRELLLWAAKGLITI 303
           I     +  +        K+ +    +  +  +++   +    + L ++     + +   
Sbjct: 247 IVAFENDQDLNALK---PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP 303

Query: 304 HISHTYSP---SEANLAFSAIEDRKVIGKVMIAFDD 336
             +             A   +E   +IGK++I  ++
Sbjct: 304 TTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  176 bits (449), Expect = 1e-52
 Identities = 91/352 (25%), Positives = 145/352 (41%), Gaps = 38/352 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A+   K    T           L   E P P   +   + V VKA S+N  +Y     
Sbjct: 23  MKAVGYNKPAPIT-------DDASLLDIELPKPAP-AGHDILVEVKAVSVNPVDYKVRRS 74

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL---GSFAQFIVADQFPV- 115
              +      V G D +G V AVGP+V+ F+ GD V    ++   G+ A+F + D+  V 
Sbjct: 75  TPPDGTD-WKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVG 133

Query: 116 --PKGCDLLAAAALPVAFGTSHVALVHRAQLS-----SGQVLLVLGAAGGVGVAAVQIGK 168
             PK  D   AAALP+   T+  A   R  ++     +   +L++G AGGVG  AVQI +
Sbjct: 134 RKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIAR 193

Query: 169 -VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD-VLYDPV 226
                T+IA A   E  +++KSLG  HV+D S           + A  L     V     
Sbjct: 194 QRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLA-----AEVAALGLGAPAFVFSTTH 248

Query: 227 GGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 286
             K   E   L+    +  +I     +       +   K  ++H     +  +     + 
Sbjct: 249 TDKHAAEIADLIAPQGRFCLI----DDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMS 304

Query: 287 DS---LRELLLWAAKGLITIHISHTYSP-SEANL--AFSAIEDRKVIGKVMI 332
           +    L ++     +G +   +++  SP + ANL  A + +E     GKV+I
Sbjct: 305 EQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  172 bits (436), Expect = 1e-50
 Identities = 56/363 (15%), Positives = 109/363 (30%), Gaps = 60/363 (16%)

Query: 22  PIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKY------------------- 61
            + LS      P       V +R++A+ LN ++   + G                     
Sbjct: 17  ELELSLDSIDTPHPGPD-EVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTAR 75

Query: 62  ---------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ 112
                      +       G++ +G V   G + +   +            ++Q+     
Sbjct: 76  VPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPA 135

Query: 113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 169
                +P+G      A+  V   T+   +V   +L     L+   AA  +G    QI   
Sbjct: 136 DQCLVLPEGATPADGASSFVNPLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLK 194

Query: 170 CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 229
            G  ++ + R  E+   LK+ G  HV + ++ + +  + E L +    G  + +D  GG 
Sbjct: 195 DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVS---TGATIAFDATGGG 251

Query: 230 LTKESLK-----------------LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG- 271
                +                        Q+ + G           N      W + G 
Sbjct: 252 KLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT--SPTEFNRNFGMAWGMGGW 309

Query: 272 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL--AFSAIEDRKVIGK 329
           L +   +          L++ ++   K     H S   S +E       +    R    K
Sbjct: 310 LLFPFLQKIGRERANA-LKQRVVAELKTTFASHYSKEISLAEVLDLDMIAVYNKRATGEK 368

Query: 330 VMI 332
            +I
Sbjct: 369 YLI 371

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  172 bits (437), Expect = 4e-48
 Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 36/309 (11%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA 99
           VR+ ++A  +N+ + L  LG Y     L    GS+ +G V   GP V+    GD V G  
Sbjct: 241 VRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMI 296

Query: 100 ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 156
              +F    VAD      +P G     AA++P+ F T++ ALV  A L  G+ LLV  AA
Sbjct: 297 P-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAA 355

Query: 157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
           GGVG+AA+Q+ +  GA + A A   +       L  +H+            ++FL A   
Sbjct: 356 GGVGMAAIQLARHLGAEVYATASEDKWQAV--ELSREHLASSRTCDF---EQQFLGATGG 410

Query: 217 KGVDVLYDPVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHGL 272
           +GVDV+ + + G+    SL++L  G + L +G        E+      +           
Sbjct: 411 RGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGV----------- 459

Query: 273 YWGSYKI-----HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
              SY+        P  + + L EL+      ++       +   +A  A   +   + +
Sbjct: 460 ---SYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHV 516

Query: 328 GKVMIAFDD 336
           GK+++    
Sbjct: 517 GKLVLTMPP 525

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  157 bits (399), Expect = 4e-45
 Identities = 68/365 (18%), Positives = 115/365 (31%), Gaps = 58/365 (15%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
             AL      + TV               P P L     V VRV+A ++N ++       
Sbjct: 12  QTALTVNDHDEVTVW-----------NAAPCPMLPR-DQVYVRVEAVAINPSDT-----S 54

Query: 61  YQEK-PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVAD 111
            + +        G+DY+GTV AVG +V++ +VGD V G            G+F+Q+ V  
Sbjct: 55  MRGQFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTR 114

Query: 112 ---QFPVPKGCDLLAAAALPVAFGTSHVALVHR------------AQLSSGQVLLVLGAA 156
                 +PKG     AAALP    T+ +A+                  S    +LV G +
Sbjct: 115 GRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGS 174

Query: 157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
                  +Q+ ++ G   IA           KS G + V D    ++  +++ + K    
Sbjct: 175 TATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTK---- 229

Query: 217 KGVDVLYDPVGGKLTKESL--KLLNWGAQILVI-GFASGEIPVIPANIALVKNWTVHGL- 272
             +    D +    +       +   G   + +  F                  T+ G  
Sbjct: 230 NNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEG 289

Query: 273 YWGSYKIHRPHVLEDS------LRELLLWAAKGLITIHISHTYSP--SEANLAFSAIEDR 324
                   RP   E+        R        G +  H                  +   
Sbjct: 290 STWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKG 349

Query: 325 KVIGK 329
           ++ G+
Sbjct: 350 ELSGE 354

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  143 bits (364), Expect = 2e-40
 Identities = 78/372 (20%), Positives = 140/372 (37%), Gaps = 77/372 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKA-----TSLNYANYL 55
           M+A+   ++G     + D  +P       P P       + ++V A     + +   +  
Sbjct: 1   MKAVQYTEIGSE-PVVVDIPTP------TPGP-----GEILLKVTAAGLCHSDIFVMD-- 46

Query: 56  QILGKYQEKP-PLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------- 97
                  +    LP   G +  GTV  +G  V+ F VGD V       CG          
Sbjct: 47  ---MPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRE 103

Query: 98  ---------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV 139
                            + GS A++++ D           D +AAA L  A  T + A+ 
Sbjct: 104 NYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAIS 163

Query: 140 H-RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD 197
                L  G   +V+G  GG+G   +QI + V  A +IAV    +++   + +G D  V 
Sbjct: 164 RVLPLLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPV 256
            S      +++E       +G   ++D VG + T   + +++     I V+G  +G    
Sbjct: 223 -SGAGAADAIRE---LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAK 278

Query: 257 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 316
           +   + +    +V   YWG+            L E++  A  G + IH   T++  E   
Sbjct: 279 VGFFM-IPFGASVVTPYWGTRS---------ELMEVVALARAGRLDIHT-ETFTLDEGPA 327

Query: 317 AFSAIEDRKVIG 328
           A+  + +  + G
Sbjct: 328 AYRRLREGSIRG 339

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  143 bits (363), Expect = 5e-40
 Identities = 87/376 (23%), Positives = 149/376 (39%), Gaps = 78/376 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKA-----TSLNYANY 54
           ++A    +   P            L   +   P+L     V VR+       T L+    
Sbjct: 16  LKAARLHEYNKP------------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQ- 62

Query: 55  LQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV----------C------ 96
               G + E  +P LP+  G +  G ++ V   V   + GD V          C      
Sbjct: 63  ----GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAG 118

Query: 97  -----------GFAALGSFAQFIVADQ---FPVPKGCDLL---AAAALPVAFGTSHVALV 139
                      G    G FA+F+         +PK          A L  A  T++ A+ 
Sbjct: 119 EDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVK 178

Query: 140 H-RAQLSSGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVD 197
                L  G  + ++G  GG+G  AVQ+ K +  AT+IA+    EK+K  + LG DHVVD
Sbjct: 179 KAARTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD 237

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPV 256
              +     VK+ ++  + +GV+V  D VG + T   +  LL    +++++G+  GE+  
Sbjct: 238 ARRD----PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELR- 291

Query: 257 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 316
            P    +    +  G   G+Y         + L EL+  A +G + + +   +   E N 
Sbjct: 292 FPTIRVISSEVSFEGSLVGNYV--------E-LHELVTLALQGKVRVEV-DIHKLDEIND 341

Query: 317 AFSAIEDRKVIGKVMI 332
               +E  +V+G+ ++
Sbjct: 342 VLERLEKGEVLGRAVL 357

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  142 bits (361), Expect = 6e-40
 Identities = 73/369 (19%), Positives = 138/369 (37%), Gaps = 67/369 (18%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
            +A + +K  +P            LS  +  IP+      V +R+    +   +     G
Sbjct: 4   SKAALLKKFSEP------------LSIEDVNIPEP-QGEEVLIRIGGAGVCRTDLRVWKG 50

Query: 60  KYQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------------C--------- 96
              +    LP + G + +GT+  VG  ++  K GD V             C         
Sbjct: 51  VEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICK 109

Query: 97  -----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS--S 146
                G    G F+++++               + AA L  A  TS  A+          
Sbjct: 110 NQIIPGQTTNGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKF 169

Query: 147 GQVLLVLGAAGGVGVAAVQIGK--VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 204
            + ++++   GG+ V  +QI K  +   TI+ ++R  +   F   LG D+V ++ +    
Sbjct: 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD---- 225

Query: 205 PSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIAL 263
            +     K     G  +  D VG + T     KLL     I+++G     + +   + A+
Sbjct: 226 -AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAV 284

Query: 264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED 323
             N  + G  +GS          D L +++  +  G I  +I       + N AF+ +++
Sbjct: 285 -WNKKLLGSNYGSLN--------D-LEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDE 333

Query: 324 RKVIGKVMI 332
            +V G+ +I
Sbjct: 334 GRVDGRQVI 342

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  138 bits (350), Expect = 3e-38
 Identities = 76/377 (20%), Positives = 139/377 (36%), Gaps = 78/377 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI--- 57
           M+++V    G   V + +            IP++     VRV++ ++         +   
Sbjct: 1   MKSVVNDTDGI--VRVAES----------VIPEIKHQDEVRVKIASSG--------LCGS 40

Query: 58  -LGKYQEKPP--LPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG---------- 97
            L +  +      P   G ++SG +DAVG  V +   GD V       C           
Sbjct: 41  DLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFY 100

Query: 98  -------FAAL---GSFAQFIVADQ---FPVPKGCDLLAAAAL-PVAFGTSHVAL--VHR 141
                  F      G FA++IV  +   F +P    +   A + P+      V L   H 
Sbjct: 101 SQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPIT-----VGLHAFHL 155

Query: 142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN 200
           AQ    + ++++G AG +G+ A+Q     GA  + A+   +EK+   KS G     + S 
Sbjct: 156 AQGCENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214

Query: 201 ESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGE--IPVI 257
            S           R+L+   ++ +  G   T + ++++    AQ+ ++G    +  +   
Sbjct: 215 MSAPQMQSVL---RELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSA 271

Query: 258 PANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEAN 315
                L K  TV G +            E + R       +  +++   I+H  S     
Sbjct: 272 TFGKILRKELTVIGSWMNYSSPWPGQEWETASR----LLTERKLSLEPLIAHRGSFESFA 327

Query: 316 LAFSAIEDRKVIGKVMI 332
            A   I    + GKV++
Sbjct: 328 QAVRDIARNAMPGKVLL 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  132 bits (335), Expect = 6e-36
 Identities = 77/346 (22%), Positives = 132/346 (38%), Gaps = 69/346 (19%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
            IP+      + V+V+A        +  +     G++   PP+    G ++ G V   G 
Sbjct: 41  GIPEPGPDD-LLVKVEACGICGTDRHLLH-----GEFPSTPPV--TLGHEFCGIVVEAGS 92

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL---GSFAQFIVADQ---FP 114
            V +   G  +       CG                    +   G FA++++  +   F 
Sbjct: 93  AVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFE 152

Query: 115 VPKGCDLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 171
           +P   D +  A   P+A       L  V  + + +G  + +LG  G +G+  VQ+ ++ G
Sbjct: 153 IPLTLDPVHGAFCEPLA-----CCLHGVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAG 206

Query: 172 AT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL 230
           AT +I   R A K +  + +G    VD S   V+ ++          GVDV+ +  G   
Sbjct: 207 ATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAG-PVGLVPGGVDVVIECAGVAE 265

Query: 231 T-KESLKLLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 288
           T K+S +L   G  ++++G       V I     L +   V G +        P V   +
Sbjct: 266 TVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSF------INPFVHRRA 319

Query: 289 LRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 332
             +L+   A G I I   IS   S  EA    S       + KV++
Sbjct: 320 A-DLV---ATGAIEIDRMISRRISLDEAPDVISNPAAAGEV-KVLV 360

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  134 bits (339), Expect = 6e-35
 Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 14/323 (4%)

Query: 29   EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN 88
                   S       V  TSLN+ + +   GK         +PG   +            
Sbjct: 1551 LHYALPASCQDRLCSVYYTSLNFRDVMLATGKL----SPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 89   FKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 145
               G  V G       A  ++  Q   + VP    L  AA++P+ + T++ +LV R ++ 
Sbjct: 1607 DASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQ 1666

Query: 146  SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNE 201
             G+ +L+   +GGVG AA+ I    G  +      AEK  +L++    L      +  + 
Sbjct: 1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT 1726

Query: 202  SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANI 261
            S     +  L+    KGVD++ + +  +  + S++ L    + L IG             
Sbjct: 1727 SFE---QHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMA 1783

Query: 262  ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 321
              +KN T HG+   S         ++    L     +G++       +  ++   AF  +
Sbjct: 1784 VFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYM 1843

Query: 322  EDRKVIGKVMIAFDDMKSIRPRL 344
               K IGKV+I   + +      
Sbjct: 1844 AQGKHIGKVVIQVREEEQGPAPR 1866

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  120 bits (303), Expect = 2e-31
 Identities = 73/325 (22%), Positives = 134/325 (41%), Gaps = 50/325 (15%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V+V+++A+ + + +     G +  KP LPF+PG +  G V AVG  VS  K GD V    
Sbjct: 30  VQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPW 89

Query: 96  -------C-----------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP 128
                  C                 G++  G + +++VAD      +P     +  A + 
Sbjct: 90  LYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPIL 149

Query: 129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 188
            A  T +  L        GQ +++ G  GG+G  AVQ  +  G  + AV     K+   +
Sbjct: 150 CAGVTVYKGLKV-TDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR 207

Query: 189 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVI 247
            LG +  V+  +      +++     ++ G   +       K   +++ ++  G  I + 
Sbjct: 208 RLGAEVAVNARDTDPAAWLQK-----EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALN 262

Query: 248 GFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 307
           G   G+      ++ ++K  T+ G   G+          D L+E L +AA G +   +  
Sbjct: 263 GLPPGDFGTPIFDV-VLKGITIRGSIVGT--------RSD-LQESLDFAAHGDVKATV-S 311

Query: 308 TYSPSEANLAFSAIEDRKVIGKVMI 332
           T    + N  F  + + KV G+V++
Sbjct: 312 TAKLDDVNDVFGRLREGKVEGRVVL 336

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  121 bits (305), Expect = 2e-31
 Identities = 71/366 (19%), Positives = 133/366 (36%), Gaps = 76/366 (20%)

Query: 30  PIPQLNSSTAVRVRVKATS--------LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81
           P P++   T + ++VKA                  IL       P+    G ++SG V  
Sbjct: 48  PEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPV--TLGHEFSGVVVE 105

Query: 82  VGPNV------SNFKVGDTV-------CG-----------------FAAL---GSFAQFI 108
            GP          F++G+ V       CG                        G+FA+++
Sbjct: 106 AGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYV 165

Query: 109 VADQ---FPVPKGCDL------LAAAAL--PVAFGTSHVALVHRAQLSSGQVLLVLGAAG 157
             D    + + +   +        A +L  P +    +  +V    +  G  +++LG  G
Sbjct: 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAY-NAVIVRGGGIRPGDNVVILGG-G 223

Query: 158 GVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL 216
            +G+AAV I K  GA+ +I       +    K LG DHV+D + E+ + +V ++      
Sbjct: 224 PIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGL-- 281

Query: 217 KGVDVLYDPVGGKLT-KESLKLLNW-----GAQILVIGFASGEIPVIPANIALVKNWTVH 270
            G  +  +  G        ++ + W      A + ++  A  +IP +   +  V+   + 
Sbjct: 282 -GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIP-LTGEVFQVRRAQIV 339

Query: 271 GLYWGSYKIHRPHVLEDSLRELLLWAAKGL-ITIHISHTYSPSEANLAFSAIEDRKVIGK 329
           G           H    +   ++   A G+ +T  IS T S  E       ++  K + K
Sbjct: 340 GSQG--------HSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVK 391

Query: 330 VMIAFD 335
           V +  +
Sbjct: 392 VTMLNE 397

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  119 bits (301), Expect = 3e-31
 Identities = 88/368 (23%), Positives = 148/368 (40%), Gaps = 62/368 (16%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  +  +P              K    P + S   V VR+KA  + + +     G 
Sbjct: 1   MKAAVVEQFKEPLKI-----------KEVEKPTI-SYGEVLVRIKACGVCHTDLHAAHGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C------------- 96
           +  KP LP +PG +  G V+ VGP V++ KVGD V           C             
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH 108

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G++  G +A++  A       +P       AA +  A  T++ AL        G+ 
Sbjct: 109 QKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPGEW 167

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
           + + G  GG+G  AVQ  K  G  ++AV  G EK++  K LG D VV+   E     +KE
Sbjct: 168 VAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226

Query: 210 FLKARKLKGVD-VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWT 268
                K+ GV   +   V     + +   +  G   +++G    E+P+   +  ++    
Sbjct: 227 -----KVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDT-VLNGIK 280

Query: 269 VHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 328
           + G   G          +  L+E L +AA+G +   I       + N  F  +   ++ G
Sbjct: 281 IIGSIVG-------TRKD--LQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQING 330

Query: 329 KVMIAFDD 336
           +V++  +D
Sbjct: 331 RVVLTLED 338

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  118 bits (297), Expect = 1e-30
 Identities = 79/374 (21%), Positives = 138/374 (36%), Gaps = 77/374 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M AL      +  +++ D           P+P+      + VRV+A S     L+   + 
Sbjct: 1   MRALAKLAPEE-GLTLVDR----------PVPEP-GPGEILVRVEAASICGTDLHIWKWD 48

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
               + + +PPL  V G ++SG V+AVGP V   +VGD V       C            
Sbjct: 49  AW-ARGRIRPPL--VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYH 105

Query: 98  ------FAAL---GSFAQFIVADQ---FPVPKGCDLLAAAAL-PVAFGTSHVAL--VHRA 142
                    +   G FA+++V      +  PK      AA L P        A+  V+  
Sbjct: 106 VCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFG-----NAVHTVYAG 160

Query: 143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNE 201
              SG+ +L+ G AG +G+ A  + +  GA  I+       ++ F +    D +V+   E
Sbjct: 161 SGVSGKSVLITG-AGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEE 218

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
            ++  V+         GV+VL +  G      + L  L  G +  ++G  S  I    A 
Sbjct: 219 DLLEVVRRVTG----SGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAG 274

Query: 261 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAF 318
             +++  T  G+                          G + +   ++H    S    AF
Sbjct: 275 ELVMRGITAFGIAGRRLWQTWMQGTA--------LVYSGRVDLSPLLTHRLPLSRYREAF 326

Query: 319 SAIEDRKVIGKVMI 332
             +   + + KV++
Sbjct: 327 GLLASGQAV-KVIL 339

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  117 bits (295), Expect = 2e-30
 Identities = 70/306 (22%), Positives = 121/306 (39%), Gaps = 49/306 (16%)

Query: 64  KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C---------------- 96
              LP V G + +G V  +G NV  +K+GD             C                
Sbjct: 57  PVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL 116

Query: 97  -GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
            G+   GSF Q+  AD      +P+G DL   A +  A  T + AL   A L +G  + +
Sbjct: 117 SGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKS-ANLMAGHWVAI 175

Query: 153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 212
            GAAGG+G  AVQ  K  G  ++ +  G  K +  +S+G +  +D + E  I      + 
Sbjct: 176 SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIV---GAVL 232

Query: 213 ARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG 271
                G   + +    +   + S + +      +++G  +G          +VK+ ++ G
Sbjct: 233 KATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292

Query: 272 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVM 331
            Y G+             RE L + A+GL+   I      S     +  +E  +++G+ +
Sbjct: 293 SYVGNRA---------DTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYV 342

Query: 332 IAFDDM 337
           +   D 
Sbjct: 343 V---DT 345

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  116 bits (294), Expect = 4e-30
 Identities = 74/380 (19%), Positives = 143/380 (37%), Gaps = 82/380 (21%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
             +LV    GD  + + +           PIP+      V +R+ +       ++Y  Y 
Sbjct: 8   NLSLVVHGPGD--LRLENY----------PIPEP-GPNEVLLRMHSVGICGSDVHYWEYG 54

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
           +I G +  K P+  V G + SGTV+ VG +V + K GD V                    
Sbjct: 55  RI-GNFIVKKPM--VLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYN 111

Query: 98  ------FAAL----GSFAQFIV--ADQ-FPVPKGCDLLAAAAL-PVAFGTSHVAL--VHR 141
                 F A     G+  +F    A   + +P        A + P++     V +    R
Sbjct: 112 LSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLS-----VGIHACRR 166

Query: 142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN 200
             ++ G  +LV G AG +G+  + + K  GA  ++     A ++   K +G D V+ +S 
Sbjct: 167 GGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK 225

Query: 201 ESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPA 259
           ES     ++ ++ +     +V  +  G     +  +     G  ++++G  S     +P 
Sbjct: 226 ESPQEIARK-VEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTT-VPL 283

Query: 260 NIALVKNWTVHG--LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEAN 315
             A ++   + G   Y  ++    P  +           A   + +   ++H +   +A 
Sbjct: 284 LHAAIREVDIKGVFRYCNTW----PVAIS--------MLASKSVNVKPLVTHRFPLEKAL 331

Query: 316 LAFSAIEDRKVIGKVMIAFD 335
            AF   +    + K+M+  D
Sbjct: 332 EAFETFKKGLGL-KIMLKCD 350

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  115 bits (291), Expect = 7e-30
 Identities = 81/377 (21%), Positives = 142/377 (37%), Gaps = 77/377 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M A++  K   P       +  +      P P       V ++V ATS     L+   + 
Sbjct: 5   MVAIMKTK---PGYGAELVEVDV------PKPGPGE---VLIKVLATSICGTDLHIYEWN 52

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
           +   + + KPP   + G + +G V  +GP V   +VGD V       CG           
Sbjct: 53  EW-AQSRIKPPQ--IMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYH 109

Query: 98  ------FAAL---GSFAQFIVADQ---FPVPKGCDLLAAAAL-PVAFGTSHVAL--VHRA 142
                    +   G FA++ V      +  PK      A    P+       A+  V   
Sbjct: 110 VCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLG-----NAVDTVLAG 164

Query: 143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNE 201
            + SG+ +L+ G AG +G+  + + K  GA  +I       + +  K +G D+V++   E
Sbjct: 165 PI-SGKSVLITG-AGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE 222

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 260
            V+  V +        GVDV  +  G  K  ++ L+ +    ++ ++G   G++ +   N
Sbjct: 223 DVVKEVMDITDGN---GVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNN 279

Query: 261 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSP-SEANLA 317
           + + K  T++    G    H           LL     G + +   I+H Y    +   A
Sbjct: 280 LIIFKALTIY----GITGRHLWETWYTVS-RLL---QSGKLNLDPIITHKYKGFDKYEEA 331

Query: 318 FSAIEDRKVIGKVMIAF 334
           F  +   K  GKV+   
Sbjct: 332 FELMRAGKT-GKVVFML 347

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  116 bits (292), Expect = 8e-30
 Identities = 70/391 (17%), Positives = 130/391 (33%), Gaps = 85/391 (21%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
             A+V  K   P +   +                    ++ V + +       ++     
Sbjct: 18  AHAMVLEKFNQP-LVYKE--------FEISDIPRG---SILVEILSAGVCGSDVHMFR-- 63

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSN-----FKVGDTV-------CG------ 97
              G+     PLP + G + +G V  V     +      K GD +       CG      
Sbjct: 64  ---GEDPR-VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCK 119

Query: 98  -----------------------FAALGSFAQFIVADQ----FPVPKGCDLLAAAALPVA 130
                                      G ++  IV D       V +  DL   A    +
Sbjct: 120 VSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCS 179

Query: 131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS 189
             T++ A     +  +G+ +++ GA G +G+  V I +  GA  +I +A    ++K  + 
Sbjct: 180 GATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238

Query: 190 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG 248
           +G D  ++    SV    K  +     +G D + +  G      E  +LL  G    V G
Sbjct: 239 IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG 298

Query: 249 FA--SGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH-- 304
            A     +P       ++KN T  G++                 + +   ++    +   
Sbjct: 299 VAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS---------HFVKTVSITSRNYQLLSKL 349

Query: 305 ISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 335
           I+H     EAN A   +E R+ + KV++  +
Sbjct: 350 ITHRLPLKEANKALELMESREAL-KVILYPE 379

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score =  111 bits (281), Expect = 9e-30
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 105 AQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 164
           +  +V    P+P       AA   VA+ T+  +L    +LS G+ +L+  A GGVG+AAV
Sbjct: 1   SDLVV----PIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAV 56

Query: 165 QIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 224
            I K+ GA I   A    K + L  LGV++V D  +        E L+     GVDV+ +
Sbjct: 57  SIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDF---ADEILELTDGYGVDVVLN 113

Query: 225 PVGGKLTKESLKLLNWGAQILVIG----FASGEIPVIPANIALVKNWTVHGLYWGSYKIH 280
            + G+  +  +++L  G + + +G    +A   + +        K+ +   +        
Sbjct: 114 SLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALA----KSASFSVVDLDLNLKL 169

Query: 281 RPHVLEDSLRELLLWAAKGLITIHISHTY 309
           +P      L+ +L   A G + +     +
Sbjct: 170 QPARYRQLLQHILQHVADGKLEVLPVTAF 198

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  110 bits (278), Expect = 6e-28
 Identities = 81/353 (22%), Positives = 138/353 (39%), Gaps = 71/353 (20%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           PIP+      V +++         ++Y  + +I   +  K P+  V G + SGTV  VG 
Sbjct: 22  PIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRI-ADFIVKDPM--VIGHEASGTVVKVGK 77

Query: 85  NVSNFKVGDTV-------CG-----------------FAAL----GSFAQFIV--ADQ-F 113
           NV + K GD V       C                  F A     G+ A++ V  AD   
Sbjct: 78  NVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCH 137

Query: 114 PVPKGCDLLAAAAL-PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC 170
            +P    L   A L P++     V +    RA +  G  +LV+G AG +G+ +V   K  
Sbjct: 138 KLPDNVSLEEGALLEPLS-----VGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY 191

Query: 171 GATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
           GA ++  AR   +++  K+ G D   VVD + E     ++  +++      +V  D  G 
Sbjct: 192 GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER-IRSAIGDLPNVTIDCSGN 250

Query: 229 KLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG--LYWGSYKIHRPHVL 285
           +      + +   G  ++++G  S  +  +P   A  +   +     Y   Y    P  L
Sbjct: 251 EKCITIGINITRTGGTLMLVGMGSQMVT-VPLVNACAREIDIKSVFRYCNDY----PIAL 305

Query: 286 EDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKV-IGKVMIAFD 335
           E          A G   +   ++H++   +   AF A   +     KVMI+  
Sbjct: 306 E--------MVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  103 bits (260), Expect = 2e-25
 Identities = 71/367 (19%), Positives = 135/367 (36%), Gaps = 75/367 (20%)

Query: 19  EKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGS 73
            ++   L ++    +      V V V++T      +++  +  I G    +     V G 
Sbjct: 23  SEASPSL-ESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI-GPMIVECDH--VLGH 78

Query: 74  DYSGTVDAVGPNVSNFKVGDTV-------CG-----------------FAAL----GSFA 105
           + +G V AV P+V + KVGD V       C                  F +     G   
Sbjct: 79  ESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLR 138

Query: 106 QFIV--ADQ-FPVPKGCDL-LAAAAL--PVAFGTSHVAL--VHRAQLSSGQVLLVLGAAG 157
           +++   A     +    ++     A+  P++     VAL  + RA +  G  +L+ G AG
Sbjct: 139 RYVNHPAVWCHKIG---NMSYENGAMLEPLS-----VALAGLQRAGVRLGDPVLICG-AG 189

Query: 158 GVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIP-SVKEFLKARK 215
            +G+  +   K  GA  ++       ++KF K +  + V           S K+ +++  
Sbjct: 190 PIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG 249

Query: 216 LKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG--L 272
                V  +  G + +   ++  + +G ++ VIG    EI  IP   A V+   +     
Sbjct: 250 GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQ-IPFMRASVREVDLQFQYR 308

Query: 273 YWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRK-VIGK 329
           Y  ++    P  +             GL+ +   ++H +   +A  AF    D K    K
Sbjct: 309 YCNTW----PRAIR--------LVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIK 356

Query: 330 VMIAFDD 336
           V I   +
Sbjct: 357 VQIQSLE 363

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  103 bits (259), Expect = 3e-25
 Identities = 65/392 (16%), Positives = 121/392 (30%), Gaps = 83/392 (21%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATS-----LNYANYL 55
           M+A++ +   +  V + D              +L+S   +++R              N  
Sbjct: 1   MKAIIVKP-PNAGVQVKDV----------DEKKLDSYGKIKIRTIYNGICGADREIVNGK 49

Query: 56  QILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CG----------- 97
             L    +      V G +  G V+        F  GD V       CG           
Sbjct: 50  LTLSTLPKGKD-FLVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPD 105

Query: 98  ------FAAL------GSFAQFIVADQ---FPVPKGCDLLAAAALPVA-----------F 131
                 F         G   ++   D      +PK  + +   A P+A            
Sbjct: 106 FCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEV 165

Query: 132 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 191
                         + + +LV+G  G +GV    + +  G  +    R          + 
Sbjct: 166 QKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE 224

Query: 192 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--GKLTKESLKLLNWGAQILVIGF 249
                  ++ +    +K+      +   DV+ D  G    +    + LL     + + GF
Sbjct: 225 ETKTNYYNSSNGYDKLKD-----SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGF 279

Query: 250 -ASGEIPVIPANIALV--KNWTVHGLYWGSYKIHRPHVLE--DSLRELLLWAAKGLITIH 304
             SG +P+    +  +   N T+ GL     K H    +    S + L   AAK LIT  
Sbjct: 280 STSGSVPLDYKTLQEIVHTNKTIIGLV-NGQKPHFQQAVVHLASWKTLYPKAAKMLIT-- 336

Query: 305 ISHTYSPSEANLAFSAIEDRKVIG-KVMIAFD 335
              T S ++       + +++    K+ I ++
Sbjct: 337 --KTVSINDEKELLKVLREKEHGEIKIRILWE 366

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  102 bits (257), Expect = 4e-25
 Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 21/231 (9%)

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFG-------TSHVA 137
             S F  G  V   +   +    I   +       +      L +A G       T++  
Sbjct: 79  KNSAFPAGSIVLAQSGWTTHF--ISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFG 136

Query: 138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD 197
           L+    +  G+ +LV  AAG VG    QI K+ G  ++  A   EKI +LK +G D   +
Sbjct: 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG----E 253
                   S++E LK     G D  +D VGG+     L  +    +I + G  S     +
Sbjct: 197 YKTV---NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMD 253

Query: 254 IPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 302
                 +    + K   + G     +   +  V E +LR+L+ W  +G I 
Sbjct: 254 QLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKWVLEGKIQ 301

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 95.7 bits (239), Expect = 2e-22
 Identities = 52/252 (20%), Positives = 87/252 (34%), Gaps = 29/252 (11%)

Query: 68  PFVPGSDYSGTVDAVGP----NVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLA 123
            + PG    G    V         ++K GD + G     ++ ++ V              
Sbjct: 71  AYTPGQPIQGY--GVSRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHT 125

Query: 124 AAALPVAFG-------TSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
              L    G       T++           G+ + V  A+G VG    Q+ K+ G  ++ 
Sbjct: 126 DVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVG 185

Query: 177 VARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 235
            A   EK+  LK+  G D   +   E     +   LK     G+D+ ++ VGGK+    L
Sbjct: 186 SAGSKEKVDLLKTKFGFDDAFNYKEE---SDLTAALKRCFPNGIDIYFENVGGKMLDAVL 242

Query: 236 KLLNWGAQILVIGFASG---EIPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
             +N   +I V G  S    E      N++  + K   + G     +           L 
Sbjct: 243 VNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFY----DKYSKFLE 298

Query: 291 ELLLWAAKGLIT 302
            +L    +G IT
Sbjct: 299 FVLPHIREGKIT 310

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 94.3 bits (235), Expect = 4e-22
 Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 27/229 (11%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           V VRV  +S+NY + L  +        +    PFVPG D +G V  V      F+ GD V
Sbjct: 33  VLVRVHYSSVNYKDGLASIPD----GKIVKTYPFVPGIDLAGVV--VSSQHPRFREGDEV 86

Query: 96  ------CGFAALGSFAQFI-VADQF--PVPKGCDLLAAAALPVAFGTSHV---ALVHRAQ 143
                  G    G ++++  +  ++  P+PKG  L  A A+  A  T+ +    L     
Sbjct: 87  IATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGL 146

Query: 144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 203
                 +LV GA GGVG  AV +    G T+ A    A +  +L+ LG   V+    + +
Sbjct: 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLARE-DVM 205

Query: 204 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG 252
              ++   K R    V    DPVGG+     L  + +G  + V G   G
Sbjct: 206 AERIRPLDKQRWAAAV----DPVGGRTLATVLSRMRYGGAVAVSGLTGG 250

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 93.9 bits (234), Expect = 5e-22
 Identities = 62/239 (25%), Positives = 92/239 (38%), Gaps = 29/239 (12%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV 95
           V ++V  + +NY + L           +    P + G D +GTV  V  N   F  GD V
Sbjct: 34  VLIKVAYSGINYKDGLAGKAG----GNIVREYPLILGIDAAGTV--VSSNDPRFAEGDEV 87

Query: 96  ------CGFAALGSFAQFI-VADQF--PVPKGCDLLAAAALPVAFGT---SHVALVHRAQ 143
                  G +  G  +++  V   +  P+P+   L  A     A  T   S   L     
Sbjct: 88  IATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGL 147

Query: 144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 203
                 +LV GA GGVG  AV +    G  ++A     E   +LK LG   V+    +  
Sbjct: 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRE-DVY 206

Query: 204 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA 262
             ++K   K +    V    DPVGGK     L  + +G  + V G   G    +PA + 
Sbjct: 207 DGTLKALSKQQWQGAV----DPVGGKQLASLLSKIQYGGSVAVSGLTGG--GEVPATVY 259

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 90.8 bits (226), Expect = 6e-21
 Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 45/280 (16%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+AL+  +    T++         L   +          V V V  +SLNY + L I GK
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGD----------VTVDVHWSSLNYKDALAITGK 50

Query: 61  YQEKPPL----PFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQFI-V 109
                 +    P +PG D++GTV         F  G  V       G    G  A+   V
Sbjct: 51  ----GKIIRHFPMIPGIDFAGTV--HASEDPRFHAGQEVLLTGWGVGENHWGGLAERARV 104

Query: 110 ADQF--PVPKGCDLLAAAALPVAFGTSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAV 164
              +   +P G     A  +  A  T+ + ++             ++V GA+GGVG  AV
Sbjct: 105 KGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAV 164

Query: 165 QIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL-KGV-DVL 222
            +    G  + AV+       +LKSLG + ++            EF ++R L K +    
Sbjct: 165 ALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRD---------EFAESRPLEKQLWAGA 215

Query: 223 YDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA 262
            D VG K+  + L  +N+G  +   G A G    +P  + 
Sbjct: 216 IDTVGDKVLAKVLAQMNYGGCVAACGLAGG--FALPTTVM 253

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 60/362 (16%), Positives = 109/362 (30%), Gaps = 77/362 (21%)

Query: 30  PIPQLNSSTAVRVRVKATS-----LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGP 84
           P P+   S    VR                    G  + +  L  V G +  G V  V P
Sbjct: 19  PRPEP-ESGEALVRTLRVGVCGTDHEVIAGGHG-GFPEGEDHL--VLGHEAVGVV--VDP 72

Query: 85  NVSNFKVGDTV---------CG-----------------FAAL------GSFAQFIVADQ 112
           N +  + GD V          G                 +         G  ++F  + +
Sbjct: 73  NDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPE 132

Query: 113 ---FPVPKGCDLLAAAA--LPVAF-GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQI 166
                +P+    L      + +      H      A         VLG  G +G+  + +
Sbjct: 133 KYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAM 191

Query: 167 GKVCGA---TIIAVARG---AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 220
            KV       +  + R       I  ++ L   +V   S ++ +  V +       + +D
Sbjct: 192 LKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVD--SRQTPVEDVPD-----VYEQMD 244

Query: 221 VLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA----LVKNWTVHGLYWG 275
            +Y+  G  K   +S++ L       ++G  S     + A       ++ N  + G    
Sbjct: 245 FIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSV-N 303

Query: 276 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 335
           S+  H         +    +  + L+T      +  SE   AF   +D     K  I F 
Sbjct: 304 SHVEHFEAATVTFTKLPKWFL-EDLVT----GVHPLSEFEAAF---DDDDTTIKTAIEFS 355

Query: 336 DM 337
            +
Sbjct: 356 TV 357

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 88.8 bits (221), Expect = 5e-20
 Identities = 79/347 (22%), Positives = 134/347 (38%), Gaps = 72/347 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT++ + +   + G   E    P + G   +G V++VG  V+  K GDTV    
Sbjct: 34  VRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLY 92

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         +    +F+++ V  
Sbjct: 93  IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152

Query: 112 QFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
              V K      L     L     T + A V+ A+L  G V  V G  GGVG+A +   K
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCK 211

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
           V GA+ II V    +K    K  G    ++  + S    ++E L      GVD  ++ +G
Sbjct: 212 VAGASRIIGVDINKDKFARAKEFGATECINPQDFS--KPIQEVLIEMTDGGVDYSFECIG 269

Query: 228 -GKLTKESLKLLN--WGAQILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-- 281
             K+ + +L+  +  WG  ++V +  +  EI   P  +   + W   G  +G +K     
Sbjct: 270 NVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK--GTAFGGWKSVESV 327

Query: 282 PHVLEDSLR-ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
           P ++ + +  ++ +      +T    H  S  E N AF  +   K I
Sbjct: 328 PKLVSEYMSKKIKV---DEFVT----HNLSFDEINKAFELMHSGKSI 367

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 88.4 bits (220), Expect = 6e-20
 Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 30/238 (12%)

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAAALPVAFG-------TSHVA 137
             +N   GD V  F     +   ++ D   + K    L    L    G       TS + 
Sbjct: 92  KHTNLTKGDFVTSF--YWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIG 149

Query: 138 LVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS-LGVD 193
           +  +  +++G  + ++V GAAG  G  A QIG   G + ++ +    EK   L S LG D
Sbjct: 150 IQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD 209

Query: 194 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG- 252
             ++   ++V     E L+     GVDV +D VGG ++   +  +N  + I++ G  S  
Sbjct: 210 AAINYKKDNV----AEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQY 265

Query: 253 ------EIPVIPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 302
                   P+ PA  A    +N T       +YK       E  + +L  W  +G + 
Sbjct: 266 NKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK----DKFEPGILQLSQWFKEGKLK 319

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 81/363 (22%), Positives = 134/363 (36%), Gaps = 90/363 (24%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           V V+V AT + + + +    KY    PLP V G + SG ++A+GPNV+  +VGD V    
Sbjct: 34  VLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY 91

Query: 96  --CG-------------------------------------------FAALGSFAQFIVA 110
             CG                                           F A  SFA + ++
Sbjct: 92  GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALS 151

Query: 111 DQF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIG 167
            +     V K   +     L     T   A ++  +++     +  GA G VG++A+   
Sbjct: 152 RENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAA 210

Query: 168 KVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 226
           KVCGA  IIAV     +++  K LG  HV++   +  + ++KE        GV+   +  
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG----GVNFALEST 266

Query: 227 G-GKLTKESLKLLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHV 284
           G  ++ K+ +  L    +I V+G            N  L+   T+ G+  GS     P  
Sbjct: 267 GSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS---P-- 321

Query: 285 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM---KS 339
            +  + EL+    +G       +           AF  I           A  D     +
Sbjct: 322 -KKFIPELVRLYQQGKFPFDQLVKF--------YAFDEINQ---------AAIDSRKGIT 363

Query: 340 IRP 342
           ++P
Sbjct: 364 LKP 366

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 86.1 bits (214), Expect = 4e-19
 Identities = 73/358 (20%), Positives = 136/358 (37%), Gaps = 80/358 (22%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR++V AT +   +      K +     P V G + +G V++VGP V+NFK GD V    
Sbjct: 36  VRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFF 93

Query: 96  ---CG---------------------------------------------FAALGSFAQF 107
              C                                              F  + SF+Q+
Sbjct: 94  APQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 153

Query: 108 IVADQF---PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 164
            V  +     V    +L     +   F + + A ++ A+++ G    V G  G VG++A+
Sbjct: 154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAI 212

Query: 165 QIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
              K+ GA+ IIA+    EK    K+LG    ++         V++ +      GVD   
Sbjct: 213 IGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELD--KPVQDVITELTAGGVDYSL 270

Query: 224 DPVG-GKLTKESLKLLN--WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH 280
           D  G  +  K ++      WG+   V+G    E+ +   +  ++   +++G ++G +K  
Sbjct: 271 DCAGTAQTLKAAVDCTVLGWGSCT-VVGAKVDEMTIPTVD--VILGRSINGTFFGGWKSV 327

Query: 281 R--PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
              P+++ D               +   ++H       N A   +++ K I + ++ F
Sbjct: 328 DSVPNLVSDYK--------NKKFDLDLLVTHALPFESINDAIDLMKEGKSI-RTILTF 376

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 71/347 (20%), Positives = 125/347 (36%), Gaps = 73/347 (21%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ AT +  ++   + G      PLP + G + +G V+++G  V+  + GD V    
Sbjct: 36  VRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLF 93

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+Q+ V D
Sbjct: 94  TPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 153

Query: 112 QFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           +  V K      L     +   F T + + V  A+++ G    V G  GGVG++ +   K
Sbjct: 154 EISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCK 212

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
             GA  II V    +K    K +G    V+  +      ++E L      GVD  ++ +G
Sbjct: 213 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYK--KPIQEVLTEMSNGGVDFSFEVIG 270

Query: 228 -GKLTKESLKLLN--WGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWGSYKIHR-- 281
                  +L      +G  ++V        + + P  +   + W   G  +G +K     
Sbjct: 271 RLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWK--GAIFGGFKSKDSV 328

Query: 282 PHVLEDSLR-ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 327
           P ++ D +  +  L     LIT    H     + N  F  +   + I
Sbjct: 329 PKLVADFMAKKFAL---DPLIT----HVLPFEKINEGFDLLRSGESI 368

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 82.7 bits (205), Expect = 8e-18
 Identities = 61/346 (17%), Positives = 122/346 (35%), Gaps = 73/346 (21%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           VR+++ A+ +  ++   +          P + G +  G V+++G  V+  K GD V    
Sbjct: 37  VRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLF 94

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                              +F ++ V  
Sbjct: 95  VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154

Query: 112 QFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV 169
              V K      L +  +   F T + A V+ A+++ G    V G  GGVG +A+   K 
Sbjct: 155 DIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKA 213

Query: 170 CGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG- 227
            GA+ II V    +K      LG    ++  +      + E +  +   GVD   +  G 
Sbjct: 214 AGASRIIGVGTHKDKFPKAIELGATECLNPKDYD--KPIYEVICEKTNGGVDYAVECAGR 271

Query: 228 GKLTKESLKLLN--WGAQILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-PH 283
            +    +L+      G  +++ +   +  +P+ P  +   ++    G  +G +K      
Sbjct: 272 IETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLK--GSVFGGFKGEEVSR 329

Query: 284 VLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI 327
           +++D +        K  I +   +S   +  + N AF  +   + +
Sbjct: 330 LVDDYM--------KKKINVNFLVSTKLTLDQINKAFELLSSGQGV 367

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 74/353 (20%), Positives = 131/353 (37%), Gaps = 72/353 (20%)

Query: 40  VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV---- 95
           +R+++ AT + + +   +     +    P V G + +G V++VGP V+ F+ G+ V    
Sbjct: 36  IRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLF 94

Query: 96  ---CG-----------------------------------------FAALGSFAQFIVAD 111
              CG                                         F    +F+Q+ V +
Sbjct: 95  ISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN 154

Query: 112 QFPVPK---GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 168
           Q  V K      L     L     T   A V+ A++  G    V G  G VG+AAV    
Sbjct: 155 QIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCH 213

Query: 169 VCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 227
             GA  IIAV    +K +  K  G    V+ ++ S    + + L      GVD   + VG
Sbjct: 214 SAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHS--EPISQVLSKMTNGGVDFSLECVG 271

Query: 228 -GKLTKESLKLLN--WGAQILVIGFA-SGEIPVIPANIALVKNWTVHGLYWGSYKIHR-- 281
              + + +L+     WG  + ++G+    ++   P  +   + W   G  +G +K     
Sbjct: 272 NVGVMRNALESCLKGWGVSV-LVGWTDLHDVATRPIQLIAGRTWK--GSMFGGFKGKDGV 328

Query: 282 PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 334
           P +++  L        K  +   I+H       N A   ++  K I + +++ 
Sbjct: 329 PKMVKAYL------DKKVKLDEFITHRMPLESVNDAIDLMKHGKCI-RTVLSL 374

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 76.8 bits (190), Expect = 6e-16
 Identities = 68/385 (17%), Positives = 121/385 (31%), Gaps = 89/385 (23%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG- 59
           M+      +G        EK           P      A+ VR  A +            
Sbjct: 1   MKGFAMLSIGKVGW---IEK---------EKPAPGPFDAI-VRPLAVA--------PCTS 39

Query: 60  ----KYQEKPPL--PFVPGSDYSGTVDAVGPNVSNFKVGDTV-------CGFAAL----- 101
                ++         + G +  G V  VG  V +FK GD V           +      
Sbjct: 40  DIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGY 99

Query: 102 ------------------GSFAQFI---VADQ--FPVPKGCDLLAAAALPVAFGTSHVAL 138
                             G F +F     AD     +PK   L AA  +P    T     
Sbjct: 100 HQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG- 158

Query: 139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVD 197
              A +  G  + V+G  G VG+ +V      GA  I AV             G   +++
Sbjct: 159 AELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIIN 217

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG----FASG 252
             N  ++  + +    +   GVD +    G   T  +++K++  G+ I  +       + 
Sbjct: 218 YKNGDIVEQILKATDGK---GVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNI 274

Query: 253 EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI--TIHISHTYS 310
           +IP     + +  +  +HG   G     R       +  L+       +  +  ++H + 
Sbjct: 275 DIPRSEWGVGM-GHKHIHG---GLCPGGRLR-----MERLIDLVFYKRVDPSKLVTHVFR 325

Query: 311 P-SEANLAFSAIEDRK--VIGKVMI 332
                  AF  ++D+   +I K ++
Sbjct: 326 GFDNIEKAFMLMKDKPKDLI-KPVV 349

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 40/173 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V  VG  V    VGD V                      C         
Sbjct: 71  PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYAS 130

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G ++  +VA++      P    L   A L  A  T +  L +      G+ 
Sbjct: 131 IYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKH 190

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVDHVVDLSNE 201
           + ++G  GG+G  AV+  K  G+ +  ++    K +  LK+ G D  +   ++
Sbjct: 191 IGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ 242

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 40/173 (23%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V  VG +VS F VGD V                      C         
Sbjct: 64  PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYND 123

Query: 97  ----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
               G    G FA+  V  Q     +P+G  +  AA L  A  T +  L H      G  
Sbjct: 124 VYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLR 183

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSLGVDHVVDLSNE 201
             +LG  GGVG   V+I K  G  +  ++   +K +  L+ LG D  V  S++
Sbjct: 184 GGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ 235

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 42/175 (24%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV----------------------C--------- 96
           P VPG +  G V AVG  V  +  GD V                      C         
Sbjct: 77  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 136

Query: 97  -----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAA-LPVAFGTSHVALVHRAQLSSG 147
                    LG ++Q IV  +     +    + LAA A L  A  T++  L H  Q   G
Sbjct: 137 PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPG 195

Query: 148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES 202
           + + V+G  GG+G   +++    GA ++A      K +  K+LG D VV+  N  
Sbjct: 196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNAD 249

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 67.2 bits (165), Expect = 9e-13
 Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 42/169 (24%)

Query: 68  PFVPGSDYSGTVDAVGPNVSNFKVGDTV-----------C-------------------- 96
           P +PG + +G +  VG  V  FK+GD V           C                    
Sbjct: 59  PMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDC 118

Query: 97  ------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSG 147
                     +G ++  IV D+     V K   L   A L  A  T++  L   ++++ G
Sbjct: 119 LDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKF-SKVTKG 177

Query: 148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 196
             + V G  GG+G  AV+     GA +   AR   K +   S+GV H  
Sbjct: 178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY 225

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 47/185 (25%)

Query: 68  PFVPGSDYSGTVDAVGPNV-SNFKVGDTV-----------C------------------- 96
           P V G +  G V  +GP   S  KVG  V           C                   
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 97  -----GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQ 148
                G+ + G +A ++   +    P+P+      AA L     T +  LV       G+
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGK 181

Query: 149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
            + ++G  GG+G     I K  GA    ++R + K +    +G DH +    E       
Sbjct: 182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEE------G 234

Query: 209 EFLKA 213
           ++ + 
Sbjct: 235 DWGEK 239

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 38/198 (19%), Positives = 63/198 (31%), Gaps = 52/198 (26%)

Query: 77  GTVDAVGPNVSNFKVGDTV----------C-----------------------GFAALGS 103
           G V   G +V N ++GD V          C                       G+  +G 
Sbjct: 71  GEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGD 130

Query: 104 F----AQFI---VADQ--FPVPKGCD----LLAAAALPVAFGTSHVALVHRAQLSSGQVL 150
           +    A+++    AD     +P        +     L     T +      A +  G  +
Sbjct: 131 WTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHG-AVTAGVGPGSTV 189

Query: 151 LVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 209
            V GA G VG+AA    ++ GA  +I       ++   K+ G +      +  +   +  
Sbjct: 190 YVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAA 248

Query: 210 FLKARKLKGVDVLYDPVG 227
            L       VD   D VG
Sbjct: 249 LLGEP---EVDCAVDAVG 263

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 39/199 (19%), Positives = 63/199 (31%), Gaps = 53/199 (26%)

Query: 77  GTVDAVGPNVSNFKVGDTV-------CGF--------------------AALGSF----- 104
           G V   G +V    +GD V       CG                     A LG+F     
Sbjct: 70  GEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK 129

Query: 105 ------AQFI-V--ADQ--FPVPKG--CDLLAAAALPVA--FGTSHVALVHRAQLSSGQV 149
                 A+++ V  AD                     ++    T        A +  G  
Sbjct: 130 GWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHG-CVSAGVKPGSH 188

Query: 150 LLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 208
           + + GA G VG  A    ++ GA  +I   +  E++K L   G + +   ++  +   + 
Sbjct: 189 VYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQID 247

Query: 209 EFLKARKLKGVDVLYDPVG 227
           + L       VD   D VG
Sbjct: 248 QILGKP---EVDCGVDAVG 263

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVK 208
           + + GA G  G+  +      G  +  + R + ++          VV D+   + +    
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV---- 61

Query: 209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 246
                + + G D +   +G +       +++ GA+ +V
Sbjct: 62  ----DKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIV 95

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 150 LLVLGAAGGVGVAAVQ--IGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSN-ESVIP 205
           + V GA G +G   +Q  + KV  + IIA+ R  EK   L   GV+    D +  ES+  
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62

Query: 206 SVKEFLKARKLKGVDVLY 223
           +           GV  L 
Sbjct: 63  A---------FAGVSKLL 71

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 43.0 bits (102), Expect = 7e-05
 Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 149 VLLVLGAAGGVGVAAVQ--IGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSN-ESVI 204
           ++ + GA G +G   ++  +  V  + I+A+ R   K + L + G+     D  +  ++ 
Sbjct: 1   MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALT 60

Query: 205 PSVKEFLKARKLKGVDVLY 223
            +         L+GV+ L 
Sbjct: 61  SA---------LQGVEKLL 70

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 10/99 (10%)

Query: 151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 210
           LV+GA G V    +   K  G   +A+ R  E+   L+  G   +V  + E         
Sbjct: 25  LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHA--- 81

Query: 211 LKARKLKGVDVLYDPVG--GKLTKESLKLLNWGAQILVI 247
                   +D +    G       +   L++    I  I
Sbjct: 82  -----FASIDAVVFAAGSGPHTGADKTILIDLWGAIKTI 115

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 55/432 (12%), Positives = 114/432 (26%), Gaps = 149/432 (34%)

Query: 4   LVCRKLGDPTVSI--HDEKSPIVLSKTEP--------IPQLNSSTAVRVRVKATSLNYAN 53
             C+ + D   SI   +E   I++SK                    V+  V+   L   N
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE-EVLRI-N 90

Query: 54  YLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQF 113
           Y  ++   + +   P +    Y    D +  +   F                      ++
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA---------------------KY 129

Query: 114 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVG---VAA------- 163
            V +             +     AL+   +L   + +L+ G   G G   VA        
Sbjct: 130 NVSR----------LQPYLKLRQALL---ELRPAKNVLIDG-VLGSGKTWVALDVCLSYK 175

Query: 164 VQIGKVCGA---TIIAVARGAEKIKFLKSL----------GVDHV--VDLSNESVIPSVK 208
           VQ           +         ++ L+ L            DH   + L   S+   ++
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 209 EFLKARKLK-GVDVLYDPVGGKLTKESLKLLNWGAQILVI-------------------- 247
             LK++  +  + VL   V      ++    N   +IL+                     
Sbjct: 236 RLLKSKPYENCLLVL-LNVQ---NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291

Query: 248 -----GFASGE---------------IP-----VIPANIALV----KNWTVHGLYWGSYK 278
                     E               +P       P  ++++    ++       W    
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351

Query: 279 IHR-PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFS--AI--EDRKVIGKVM-I 332
             +   ++E SL  L                  P+E    F   ++      +   ++ +
Sbjct: 352 CDKLTTIIESSLNVL-----------------EPAEYRKMFDRLSVFPPSAHIPTILLSL 394

Query: 333 AFDDMKSIRPRL 344
            + D+      +
Sbjct: 395 IWFDVIKSDVMV 406

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 58/370 (15%), Positives = 101/370 (27%), Gaps = 124/370 (33%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           ++ L   ++     S  D         +  I     S    +R    S  Y N L +L  
Sbjct: 202 LQKL-LYQIDPNWTSRSD--------HSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-- 250

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCD 120
                                   NV N K                    + F +   C 
Sbjct: 251 -------------L----------NVQNAK------------------AWNAFNL--SCK 267

Query: 121 LLA-------AAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVA-----AVQIG 167
           +L           L  A  T+H++L H +  L+  +V  +L               +   
Sbjct: 268 ILLTTRFKQVTDFLSAA-TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 168 KVCGATIIAVAR-GAEKIKFLKSLGVD---HVVDLSNESVIPSVKEFLKARKLKGVDVLY 223
               + I    R G       K +  D    +++ S   + P+  E+   RK      ++
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA--EY---RK------MF 375

Query: 224 D-----PVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP---ANIALVKNW------TV 269
           D     P    +    L L+ W   I        ++ V+       +LV+        ++
Sbjct: 376 DRLSVFPPSAHIPTILLSLI-WFDVI------KSDVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 270 HGLYW-------GSYKIHRPHVLEDSLRELLLWAAKGLITI--------HISH---TYSP 311
             +Y          Y +HR   + D       + +  LI          HI H       
Sbjct: 429 PSIYLELKVKLENEYALHR--SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 312 SEANLAFSAI 321
            E    F  +
Sbjct: 487 PERMTLFRMV 496

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 146 SGQVLLVLGAAGGVGVA-AVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESV 203
           +G+  L+ GA+ G+G A A  + K  G+ +I      EK+K L + L  ++ +++ N + 
Sbjct: 13  TGKTSLITGASSGIGSAIARLLHK-LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 204 IPSVKEFLKARKLKGVDVL 222
                  +   K   +D+L
Sbjct: 72  KEECSNLIS--KTSNLDIL 88

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	344
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	99.02
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.85
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.82
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.78
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.78
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.6
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.52
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.36
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.34
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.28
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.23
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.14
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.07
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.03
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.02
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.0
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.98
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.96
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.96
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.95
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.94
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.94
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.88
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.85
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.84
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.83
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.83
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.83
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.83
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.82
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.81
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.79
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.78
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.78
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.77
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.77
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.76
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.74
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.73
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.73
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.73
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.72
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.72
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.72
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.72
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.72
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.71
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.69
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.69
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.69
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.69
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.68
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.68
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.67
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.67
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.67
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.67
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.66
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.66
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.65
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.65
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.65
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.65
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.64
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.64
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.64
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.64
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.64
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.64
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.64
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.63
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.63
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.63
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.63
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.63
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.63
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.62
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.62
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.62
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.62
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.62
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.61
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.61
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.61
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.61
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.6
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.6
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.6
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.6
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.59
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.58
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.58
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.57
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.57
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.57
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.57
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.57
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.57
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.56
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.56
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.56
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.56
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.56
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.56
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.55
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.55
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.55
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.54
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.54
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.53
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.53
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.53
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.53
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.53
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.52
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.52
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.51
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.51
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.51
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.5
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.5
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.5
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.49
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.49
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.49
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.48
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.48
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.48
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.48
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.48
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.48
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.48
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.47
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.47
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.47
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.46
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.46
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.45
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.45
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.45
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.45
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.45
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.44
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.44
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.44
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.43
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.43
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.43
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.42
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.42
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.41
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.41
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.41
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.41
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.41
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.41
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.41
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.4
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.4
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.4
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.39
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.39
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.39
1spx_A	278	Short-chain reductase family member (5L265); paral	97.39
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.39
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.38
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.38
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.37
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.37
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.36
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.36
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.35
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.35
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.34
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.34
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.33
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.32
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.32
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.31
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.3
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.3
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.28
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.28
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.28
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.28
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.27
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.27
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.27
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.27
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.26
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.25
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.24
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.23
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.23
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.22
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.22
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.21
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.21
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.2
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.19
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.19
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.19
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.19
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.19
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.18
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.18
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.17
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.16
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.16
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.16
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.16
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.15
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.15
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.13
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.12
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.12
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.11
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.11
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.1
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.09
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.08
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.08
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.06
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.06
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.06
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.04
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.04
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.01
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.01
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.99
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.98
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.98
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.98
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.98
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.97
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.97
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.97
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.97
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.96
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.96
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.96
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.95
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.94
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.94
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.93
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.92
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.92
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.91
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.9
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.9
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.89
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.88
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.88
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.87
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.87
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.85
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.85
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.83
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.83
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.82
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.82
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.81
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.81
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.81
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.8
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.79
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.79
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.78
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.76
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.76
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.75
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.74
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.74
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.73
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.72
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.72
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.72
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.72
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.7
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.69
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.69
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.69
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.68
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.67
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.66
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.66
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.65
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.63
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.62
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.62
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.61
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.59
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.59
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.58
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.58
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.57
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.57
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.56
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.55
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.54
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.54
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.53
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.52
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.51
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.48
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	96.48
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.47
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.46
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.46
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.45
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.45
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.45
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.45
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.45
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.44
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.44
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.44
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.43
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.43
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.43
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.43
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.41
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.4
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.39
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.39
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.37
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.37
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.37
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.37
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.36
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.36
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.33
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.33
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.3
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.3
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.29
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.29
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.27
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.25
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.25
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.24
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.24
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.23
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.22
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.22
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.21
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.2
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.2
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.2
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.2
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.18
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.17
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.15
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.15
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.15
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.15
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.14
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.14
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.14
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.13
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.12
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.12
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.1
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	96.1
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.09
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.08
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.07
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.07
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.07
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.06
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.05
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.05
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.05
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.05
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.05
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	96.02
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.01
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	95.99
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.98
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.97
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	95.96
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.96
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.95
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.94
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.91
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.91
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	95.89
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.88
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.87
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.86
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.85
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.84
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.84
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.84
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.84
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.83
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.82
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.82
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.82
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.81
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.8
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.78
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.77
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	95.77
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.76

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2.3e-57  Score=407.24  Aligned_cols=318  Identities=34%  Similarity=0.523  Sum_probs=282.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus        22 MkA~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   91 (342)
T 4eye_A           22 MKAIQAQSLSGPEG---------LVYTDVETPG-AGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVR   91 (342)
T ss_dssp             EEEEEECSSSGGGG---------EEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEecCCCCce---------eEEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEE
Confidence            89999999888754         6678999999 6999999999999999999999999876556789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|++++ |++||||+++..+|+|+||++++.   +++|+++++++||+++++++|||+++.+.++++++++|||+|++|
T Consensus        92 ~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg  170 (342)
T 4eye_A           92 SAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAG  170 (342)
T ss_dssp             ECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             EECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCC
Confidence            9999999 999999999988899999999999   999999999999999999999999998899999999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      ++|++++|+|+..|++|+++++++++++.++++|++.+++++ .++   .+.+.+.+.+.++|++|||+|.+.+..++++
T Consensus       171 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~---~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~  246 (342)
T 4eye_A          171 GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGW---AKAVREATGGAGVDMVVDPIGGPAFDDAVRT  246 (342)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTH---HHHHHHHTTTSCEEEEEESCC--CHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhH---HHHHHHHhCCCCceEEEECCchhHHHHHHHh
Confidence            999999999999999999999999999999999999999988 666   5667777777799999999999999999999


Q ss_pred             ccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHH
Q 019196          238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA  317 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea  317 (344)
                      ++++|+++.+|...+.....+...++.+++++.|+..+.+....++...+.++++++++++| +++.++++|+++++++|
T Consensus       247 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A  325 (342)
T 4eye_A          247 LASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQA  325 (342)
T ss_dssp             EEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHH
T ss_pred             hcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHH
Confidence            99999999999776554455666778999999999877766666777778999999999999 99999999999999999


Q ss_pred             HHHHHcCCcceeEEEEe
Q 019196          318 FSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       318 ~~~~~~~~~~gkvvi~~  334 (344)
                      |+.+.+++..||+|++.
T Consensus       326 ~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          326 LQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHTTCCCSEEEEEC
T ss_pred             HHHHHhCCCCceEEEeC
Confidence            99999999999999863

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=3e-57  Score=408.18  Aligned_cols=320  Identities=27%  Similarity=0.445  Sum_probs=287.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus        29 MkA~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~   98 (353)
T 4dup_A           29 MRFVDLKSFGGPDV---------MVIGKRPLPV-AGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIV   98 (353)
T ss_dssp             EEEEEESSSSSGGG---------EEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEE
T ss_pred             eeEEEEccCCCccc---------eEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEE
Confidence            89999999988754         6677899999 6999999999999999999999999887666789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|+++++|++||||+++..+|+|+||+++++   +++|+++++++||+++++++|||+++.+.++++++++|||+|++|
T Consensus        99 ~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g  178 (353)
T 4dup_A           99 GVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTS  178 (353)
T ss_dssp             EECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTS
T ss_pred             EECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Confidence            99999999999999999988899999999999   999999999999999999999999998889999999999999889


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhc
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL  237 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (344)
                      ++|++++|+|+..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+ +.++|++|||+|.+.+..++++
T Consensus       179 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~---~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~  254 (353)
T 4dup_A          179 GIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDF---AAVIKAET-GQGVDIILDMIGAAYFERNIAS  254 (353)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHH-SSCEEEEEESCCGGGHHHHHHT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHH---HHHHHHHh-CCCceEEEECCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988877   55566666 7799999999999999999999


Q ss_pred             ccCCCEEEEEeccCCCCCC-cchhhhhccceEEEEEEecccccc-CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHH
Q 019196          238 LNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  315 (344)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~  315 (344)
                      ++++|+++.+|...+.... ++...++.+++++.|+........ .+....+.++++++++++|++++.++++|++++++
T Consensus       255 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  334 (353)
T 4dup_A          255 LAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVA  334 (353)
T ss_dssp             EEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHH
T ss_pred             hccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHH
Confidence            9999999999977654333 566677899999999887654332 22233455889999999999999999999999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019196          316 LAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       316 ea~~~~~~~~~~gkvvi~~  334 (344)
                      +||+.+.+++..||+|+++
T Consensus       335 ~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          335 DAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            9999999999999999975

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5.1e-56  Score=397.63  Aligned_cols=319  Identities=30%  Similarity=0.378  Sum_probs=288.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|+++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         9 mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e~~G~V~   76 (334)
T 3qwb_A            9 QKVILIDEIGGYDV---------IKYEDYPVPS-ISEEELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASGTVV   76 (334)
T ss_dssp             EEEEEESSSSSGGG---------EEEEEEECCC-CCTTEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSEEEEEEE
T ss_pred             eEEEEEecCCCCce---------eEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccceEEEEE
Confidence            89999999998654         6667899999 6999999999999999999999999775  3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeec-c---cCCCCCCCHHH---HhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVAD-Q---FPVPKGCDLLA---AAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~-~---~~~P~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                      ++|+++++|++||||+++. +|+|+||++++ .   +++|+++++++   ||++++.++|||+++.+.++++++++|||+
T Consensus        77 ~vG~~v~~~~~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~  155 (334)
T 3qwb_A           77 AKGKGVTNFEVGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLF  155 (334)
T ss_dssp             EECTTCCSCCTTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EECCCCCCCCCCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEE
Confidence            9999999999999999886 49999999999 6   99999999999   888899999999999888899999999999


Q ss_pred             cCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHH
Q 019196          154 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE  233 (344)
Q Consensus       154 g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (344)
                      |++|++|++++|+++..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+.+..
T Consensus       156 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~---~~~~~~~~~~~g~D~vid~~g~~~~~~  232 (334)
T 3qwb_A          156 AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDI---LRQVLKFTNGKGVDASFDSVGKDTFEI  232 (334)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEECCGGGGHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchH---HHHHHHHhCCCCceEEEECCChHHHHH
Confidence            98899999999999999999999999999999999999999999988877   666777787889999999999999999


Q ss_pred             HHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhh
Q 019196          234 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE  313 (344)
Q Consensus       234 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~  313 (344)
                      ++++++++|+++.+|...+....++...++.+++++.++....+.. .+....+.++++++++++|++++.++++|++++
T Consensus       233 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  311 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIA-DPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRD  311 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSC-SHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGG
T ss_pred             HHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccC-CHHHHHHHHHHHHHHHHCCCccCceeeEEcHHH
Confidence            9999999999999998776655567777889999999887665433 445566788999999999999999999999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEecC
Q 019196          314 ANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       314 ~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      +++||+.+.+++..||+|+++++
T Consensus       312 ~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          312 YRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHhCCCceEEEEecCC
Confidence            99999999999999999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.7e-56  Score=396.27  Aligned_cols=319  Identities=29%  Similarity=0.345  Sum_probs=285.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.+++.|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         2 MkA~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~   70 (325)
T 3jyn_A            2 AKRIQFSTVGGPEV---------LEYVDFEPEA-PGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVE   70 (325)
T ss_dssp             EEEEEBSSCSSGGG---------CEEEEECCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEE
T ss_pred             cEEEEEecCCCcce---------eEEeecCCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEE
Confidence            99999999998754         6678899999 69999999999999999999999998764 4689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      ++|+++++|++||||++.. .+|+|+||+++++   +++|+++++++||+++..++|||+++.+.++++++++|||+|++
T Consensus        71 ~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  150 (325)
T 3jyn_A           71 AVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAA  150 (325)
T ss_dssp             EECTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             EECCCCCCCCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999999999998865 4699999999999   99999999999999999999999999888899999999999988


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      |++|++++|+++..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+.+..+++
T Consensus       151 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  227 (325)
T 3jyn_A          151 GGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDV---AKRVLELTDGKKCPVVYDGVGQDTWLTSLD  227 (325)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTCCEEEEEESSCGGGHHHHHT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccH---HHHHHHHhCCCCceEEEECCChHHHHHHHH
Confidence            99999999999999999999999999999999999999999988877   667777788889999999999999999999


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhhcc-ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHH
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  315 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~  315 (344)
                      +++++|+++.+|...+....++...++.+ .+++.+.....+. ..++...+.++++++++++|++++.++++|++++++
T Consensus       228 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  306 (325)
T 3jyn_A          228 SVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYA-NNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAA  306 (325)
T ss_dssp             TEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHS-CSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHH
T ss_pred             HhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeec-CCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHH
Confidence            99999999999987765445565666666 5677665544442 345566788899999999999999899999999999


Q ss_pred             HHHHHHHcCCcceeEEEEe
Q 019196          316 LAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       316 ea~~~~~~~~~~gkvvi~~  334 (344)
                      +||+.+.+++..||+|+.+
T Consensus       307 ~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          307 KAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999999999863

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.3e-55  Score=398.98  Aligned_cols=309  Identities=30%  Similarity=0.419  Sum_probs=277.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++ ++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus        28 mkA~~~~~~~-~~~---------l~~~e~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~   96 (363)
T 3uog_A           28 MQEWSTETVA-PHD---------LKLAERPVPE-AGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVE   96 (363)
T ss_dssp             EEEEEBSCTT-TTC---------CEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEE
T ss_pred             hEEEEEccCC-CCC---------cEEEeeeCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEE
Confidence            8999999874 222         5667899999 6999999999999999999999999876556789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHH
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGT  133 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~t  133 (344)
                      ++|+++++|++||||++..                        .+|+|+||+++++   +++|+++++++||+++++++|
T Consensus        97 ~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  176 (363)
T 3uog_A           97 AVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT  176 (363)
T ss_dssp             EECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHH
T ss_pred             EECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHH
Confidence            9999999999999998761                        2499999999999   999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          134 SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       134 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ||+++.+.++++++++|||+| +|++|++++|+|+..|++|++++++++++++++++|++.+++.+..++   .+.+.+.
T Consensus       177 a~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~v~~~  252 (363)
T 3uog_A          177 AWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDW---VERVYAL  252 (363)
T ss_dssp             HHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCH---HHHHHHH
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccH---HHHHHHH
Confidence            999998889999999999999 599999999999999999999999999999999999999999554666   5667777


Q ss_pred             hcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHH
Q 019196          214 RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL  293 (344)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (344)
                      +.+.++|++|||+|.+.+..++++++++|+++.+|...+....++...++.+++++.|+....         .+.+++++
T Consensus       253 ~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~  323 (363)
T 3uog_A          253 TGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH---------RRALEDLV  323 (363)
T ss_dssp             HTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC---------HHHHHHHH
T ss_pred             hCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC---------HHHHHHHH
Confidence            888899999999998899999999999999999998776444566677889999999987654         47899999


Q ss_pred             HHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          294 LWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       294 ~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +++++|++++.++++|+++++++||+.+.+++ .||+|+++
T Consensus       324 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          324 GAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999999999999999999999999999998 89999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.5e-55  Score=394.84  Aligned_cols=322  Identities=25%  Similarity=0.373  Sum_probs=278.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus        23 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~   92 (354)
T 2j8z_A           23 MLAVHFDKPGGPEN---------LYVKEVAKPS-PGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVA   92 (354)
T ss_dssp             EEEEEESSCSSGGG---------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEE
T ss_pred             eeEEEEccCCCccc---------eEEeecCCCC-CCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence            89999999887643         5667899999 6999999999999999999999999776544578999999999999


Q ss_pred             EeCCCC-CCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           81 AVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        81 ~~g~~~-~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      ++|+++ ++|++||||+++..+|+|+||+++++   +++|+++++++||+++++++|||+++.+.++++++++|||+|++
T Consensus        93 ~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~  172 (354)
T 2j8z_A           93 ELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGL  172 (354)
T ss_dssp             EECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTT
T ss_pred             EECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence            999999 99999999999987899999999998   99999999999999999999999999878899999999999988


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      |++|++++|+++..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+.+..+++
T Consensus       173 ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~  249 (354)
T 2j8z_A          173 SGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDF---SEATLKFTKGAGVNLILDCIGGSYWEKNVN  249 (354)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEESSCGGGHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHH---HHHHHHHhcCCCceEEEECCCchHHHHHHH
Confidence            99999999999999999999999999999999999999999887776   566666676678999999999998899999


Q ss_pred             cccCCCEEEEEeccCCCCCCcch-hhhhccceEEEEEEecccccc-CchhHHHHHHHHHHHHHCC---ceeEeeeeeech
Q 019196          237 LLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKG---LITIHISHTYSP  311 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g---~i~~~~~~~~~l  311 (344)
                      +++++|+++.+|...+....++. ..++.+++++.|+........ .+....+.++++++++++|   ++++.++++|++
T Consensus       250 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l  329 (354)
T 2j8z_A          250 CLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV  329 (354)
T ss_dssp             HEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG
T ss_pred             hccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH
Confidence            99999999999976654334555 667889999999765432211 1112233445788999999   888889999999


Q ss_pred             hhHHHHHHHHHcCCcceeEEEEec
Q 019196          312 SEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       312 ~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +++++||+.+.+++..||+|++++
T Consensus       330 ~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          330 TEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999998888899999875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=3.4e-55  Score=393.13  Aligned_cols=325  Identities=22%  Similarity=0.320  Sum_probs=278.9

Q ss_pred             CceEEecccCCC-CccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDP-TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||++++++|.+ ++         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|
T Consensus         5 mka~~~~~~g~p~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V   74 (340)
T 3gms_A            5 GKLIQFHKFGNPKDV---------LQVEYKNIEP-LKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIV   74 (340)
T ss_dssp             EEEEEESSCSCHHHH---------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEE
T ss_pred             cEEEEEecCCCchhe---------EEEEecCCCC-CCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEE
Confidence            799999999986 32         6678899999 699999999999999999999999987765678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      +++|+++++|++||||+++..+|+|+||+++++   +++|+++++++||+++..++|||+++.+.++++++++|||+|++
T Consensus        75 ~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~  154 (340)
T 3gms_A           75 ENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACG  154 (340)
T ss_dssp             EEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             EEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCc
Confidence            999999999999999999988899999999999   99999999999999999999999999889999999999999998


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      |++|++++|+|+..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+....+++
T Consensus       155 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~---~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  231 (340)
T 3gms_A          155 SAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPL---YETVMELTNGIGADAAIDSIGGPDGNELAF  231 (340)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTSCEEEEEESSCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccH---HHHHHHHhCCCCCcEEEECCCChhHHHHHH
Confidence            89999999999999999999999999999999999999999988777   666777788889999999999988888889


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhh-ccceEEEEEEeccccc-cCchhHHHHHHHHHHHHHCCceeE-eeeeeechhh
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIAL-VKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITI-HISHTYSPSE  313 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~i~~-~~~~~~~l~~  313 (344)
                      +++++|+++.+|...+..  .+...+. ..++.+..+....+.. ..+....+.++++++++++|++++ .++++|++++
T Consensus       232 ~l~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~  309 (340)
T 3gms_A          232 SLRPNGHFLTIGLLSGIQ--VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELAD  309 (340)
T ss_dssp             TEEEEEEEEECCCTTSCC--CCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGG
T ss_pred             HhcCCCEEEEEeecCCCC--CCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHH
Confidence            999999999999765432  2222222 2455555444332221 233445688999999999999997 5889999999


Q ss_pred             HHHHHHHHHcCCc-ceeEEEEecCCCCc
Q 019196          314 ANLAFSAIEDRKV-IGKVMIAFDDMKSI  340 (344)
Q Consensus       314 ~~ea~~~~~~~~~-~gkvvi~~~~~~~~  340 (344)
                      +++||+.+.+++. .||+|+++.+++.-
T Consensus       310 ~~~A~~~~~~~~~~~GKvvl~~~~~~~~  337 (340)
T 3gms_A          310 VKAAVDVVQSAEKTKGKVFLTSYEGHHH  337 (340)
T ss_dssp             HHHHHHHHHCTTCCSSEEEEECC-----
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEeccccc
Confidence            9999999999884 59999999876643

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=8.4e-55  Score=389.58  Aligned_cols=320  Identities=26%  Similarity=0.363  Sum_probs=276.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC-CCC-CCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QEK-PPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~   78 (344)
                      |||+++.++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.+ +.. ..+|+++|||++|+
T Consensus         2 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~   71 (333)
T 1wly_A            2 VMAAVIHKKGGPDN---------FVWEEVKVGS-PGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV   71 (333)
T ss_dssp             CEEEEESSCSSGGG---------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEE
T ss_pred             cEEEEEcccCCcce---------eEEEeccCCC-CCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEE
Confidence            89999999887643         5567899999 699999999999999999999998865 211 35799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecC-CCceeeEEeecc---cCCCCCCCHHH--HhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           79 VDAVGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQ---FPVPKGCDLLA--AAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~~-~g~~~~~~~~~~---~~~P~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      |+++|+++++|++||||++... +|+|+||+++++   +++|+++++++  ||+++++++|||+++.+.++++++++|||
T Consensus        72 V~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  151 (333)
T 1wly_A           72 VEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI  151 (333)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             EEEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence            9999999999999999987654 699999999998   99999999999  89999999999999977889999999999


Q ss_pred             ecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHH
Q 019196          153 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK  232 (344)
Q Consensus       153 ~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (344)
                      +|++|++|++++|+++..|++|+++++++++.+.++++|++.++++++.+.   .+.+.+.+.+.++|++|||+|.+.++
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~---~~~i~~~~~~~~~d~vi~~~g~~~~~  228 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDF---AEVVREITGGKGVDVVYDSIGKDTLQ  228 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHHTTCCEEEEEECSCTTTHH
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHH---HHHHHHHhCCCCCeEEEECCcHHHHH
Confidence            999999999999999999999999999999999999999999999887776   55566666667899999999998899


Q ss_pred             HHHhcccCCCEEEEEeccCCCCCCcchh-hhhccc--eEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeee
Q 019196          233 ESLKLLNWGAQILVIGFASGEIPVIPAN-IALVKN--WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY  309 (344)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~  309 (344)
                      .++++++++|+++.+|...+....++.. .++.++  +++.|+... +. ..+....+.++++++++++|++++.++++|
T Consensus       229 ~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~-~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  306 (333)
T 1wly_A          229 KSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWH-YM-SNRSEIDEGSKCLFDAVKAGVLHSSVAKTF  306 (333)
T ss_dssp             HHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGG-GS-CSHHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             HHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehh-hc-cCHHHHHHHHHHHHHHHHCCCcCCCcceEE
Confidence            9999999999999999776443345555 677888  998887542 21 345455678999999999999999999999


Q ss_pred             chhhHHHHHHHHHcCCcceeEEEEec
Q 019196          310 SPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       310 ~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      +++++++||+.+.+++..||+|++++
T Consensus       307 ~l~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          307 PLREAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             EGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            99999999999999888899999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=6.5e-55  Score=392.49  Aligned_cols=321  Identities=25%  Similarity=0.388  Sum_probs=271.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.+++.|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus         4 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~   73 (349)
T 4a27_A            4 MRAVVLAGFGGLNK---------LRLFRKAMPE-PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVE   73 (349)
T ss_dssp             EEEEEECSSSSGGG---------EEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEccCCCcce---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEE
Confidence            89999999997654         6677899999 6999999999999999999999999876666789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                      ++|+++++|++||||+++..+|+|+||++++.   +++|+++++++||+++++++|||+++.+.++++++++|||+|++|
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G  153 (349)
T 4a27_A           74 ALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG  153 (349)
T ss_dssp             EECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTS
T ss_pred             EeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            99999999999999999988899999999998   999999999999999999999999998889999999999999999


Q ss_pred             hHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          158 GVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       158 ~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      ++|++++|+|+.+| ++|++++ ++++.+.++ +|++++++ .+.++   .+++.+.+ +.++|++|||+|++.+..+++
T Consensus       154 ~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~---~~~~~~~~-~~g~Dvv~d~~g~~~~~~~~~  226 (349)
T 4a27_A          154 GVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADY---VQEVKRIS-AEGVDIVLDCLCGDNTGKGLS  226 (349)
T ss_dssp             HHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCH---HHHHHHHC-TTCEEEEEEECC-------CT
T ss_pred             HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccH---HHHHHHhc-CCCceEEEECCCchhHHHHHH
Confidence            99999999999985 5888887 567788888 99999999 66666   44455554 569999999999988889999


Q ss_pred             cccCCCEEEEEeccCCCC----------------CCcchhhhhccceEEEEEEeccccccCc--hhHHHHHHHHHHHHHC
Q 019196          237 LLNWGAQILVIGFASGEI----------------PVIPANIALVKNWTVHGLYWGSYKIHRP--HVLEDSLRELLLWAAK  298 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~  298 (344)
                      +++++|+++.+|......                ...+...++.++.++.++....+....+  ....+.++++++++++
T Consensus       227 ~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  306 (349)
T 4a27_A          227 LLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQ  306 (349)
T ss_dssp             TEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHT
T ss_pred             HhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHC
Confidence            999999999999753210                1134455678899999988655433322  3457899999999999


Q ss_pred             CceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCCC
Q 019196          299 GLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  338 (344)
Q Consensus       299 g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~~  338 (344)
                      |++++.++++|+++++++||+.+.+++..||+|++++++.
T Consensus       307 g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~~  346 (349)
T 4a27_A          307 KKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKTP  346 (349)
T ss_dssp             TSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCCC
T ss_pred             CCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence            9999999999999999999999999999999999998754

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-54  Score=388.99  Aligned_cols=312  Identities=32%  Similarity=0.482  Sum_probs=275.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   70 (343)
T 2eih_A            1 MRAVVMRARGGPEV---------LEVADLPVPE-PGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVD   70 (343)
T ss_dssp             CEEEEECSSSSGGG---------EEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEE
T ss_pred             CeEEEEecCCCCce---------EEEEecCCCC-CCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEE
Confidence            99999999987543         5567899999 6999999999999999999999998765434679999999999999


Q ss_pred             EeCCCCCCCCCCCEEE-------E--------------------ecCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVC-------G--------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~-------~--------------------~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|+++++|++||||+       +                    +..+|+|+||+++++   +++|+++++++||+++++
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~  150 (343)
T 2eih_A           71 AVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLT  150 (343)
T ss_dssp             EECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHH
T ss_pred             EECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhh
Confidence            9999999999999998       4                    334699999999998   999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  210 (344)
                      ++|||+++...++++++++|||+|++|++|++++|+++..|++|+++++++++++.++++|++.++++++.++   .+.+
T Consensus       151 ~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~---~~~~  227 (343)
T 2eih_A          151 FLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDW---PKEV  227 (343)
T ss_dssp             HHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTH---HHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccH---HHHH
Confidence            9999999966678999999999999999999999999999999999999999999999999999999887665   4555


Q ss_pred             HHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          211 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      .+.+.+.++|++|||+|.+.+..++++++++|+++.+|...+....++...++.+++++.|+....         .+.++
T Consensus       228 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~  298 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMAS---------KSRLF  298 (343)
T ss_dssp             HHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCC---------GGGHH
T ss_pred             HHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCcc---------HHHHH
Confidence            566666789999999998888999999999999999998765433455667788999999875322         35688


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++++++|++++.++++|+|+++++||+.+.+++..||+|+++
T Consensus       299 ~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          299 PILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999999998999999999999999999988889999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=8.7e-54  Score=384.70  Aligned_cols=318  Identities=22%  Similarity=0.274  Sum_probs=272.4

Q ss_pred             CceEEecccC---CCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeE
Q 019196            1 MEALVCRKLG---DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (344)
Q Consensus         1 m~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G   77 (344)
                      |||++++++|   +++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.   ...+|.++|||++|
T Consensus         3 MkA~~~~~~G~~~~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G   69 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDGNL---------FKTFNLDIPE-PKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIG   69 (346)
T ss_dssp             EEEEEBSSCCCGGGCCC---------CEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEE
T ss_pred             cEEEEEEeccccCCCce---------eEeccccCCC-CCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEE
Confidence            8999999988   4433         6778999999 69999999999999999999998876   24679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCC------
Q 019196           78 TVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS------  145 (344)
Q Consensus        78 ~V~~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------  145 (344)
                      +|+++|+++++|++||||++..   .+|+|+||+++++   +++|+++++++||+++.++.|||+++.+.++++      
T Consensus        70 ~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  149 (346)
T 3fbg_A           70 VVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNEN  149 (346)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHH
T ss_pred             EEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccC
Confidence            9999999999999999999864   3699999999999   999999999999999999999999998889998      


Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      ++++|||+||+|++|++++|+|+..|++|++++++++++++++++|++.++++++ ++   .+.+.+. .+.++|++|||
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~---~~~~~~~-~~~g~Dvv~d~  224 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SL---LNQFKTQ-GIELVDYVFCT  224 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CH---HHHHHHH-TCCCEEEEEES
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cH---HHHHHHh-CCCCccEEEEC
Confidence            9999999988899999999999999999999999999999999999999998865 44   4444444 66789999999


Q ss_pred             CChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc---cCchhHHHHHHHHHHHHHCCce
Q 019196          226 VGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI---HRPHVLEDSLRELLLWAAKGLI  301 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~g~i  301 (344)
                      +|.+ .++.++++++++|+++.++...   ...+...+..+++++.++.......   ..+....+.++++++++++|++
T Consensus       225 ~g~~~~~~~~~~~l~~~G~iv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  301 (346)
T 3fbg_A          225 FNTDMYYDDMIQLVKPRGHIATIVAFE---NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIY  301 (346)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEESSCCS---SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSS
T ss_pred             CCchHHHHHHHHHhccCCEEEEECCCC---CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCE
Confidence            9985 4689999999999999887432   2345556678999998876543211   1344556889999999999999


Q ss_pred             eEeeeeee---chhhHHHHHHHHHcCCcceeEEEEecCCCC
Q 019196          302 TIHISHTY---SPSEANLAFSAIEDRKVIGKVMIAFDDMKS  339 (344)
Q Consensus       302 ~~~~~~~~---~l~~~~ea~~~~~~~~~~gkvvi~~~~~~~  339 (344)
                      ++.++++|   +++++++||+.+.+++..||+|+++++++.
T Consensus       302 ~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~~  342 (346)
T 3fbg_A          302 QPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGHH  342 (346)
T ss_dssp             CCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-----
T ss_pred             ECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCccc
Confidence            99888887   999999999999999999999999987643

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=5.4e-54  Score=385.43  Aligned_cols=306  Identities=27%  Similarity=0.422  Sum_probs=270.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus         3 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~   70 (340)
T 3s2e_A            3 MKAAVVRAFGAP-----------LTIDEVPVPQ-PGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVS   70 (340)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEECCC-CCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEE
T ss_pred             eEEEEEecCCCC-----------CEEEEccCCC-CCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEE
Confidence            999999988764           5568899999 6999999999999999999999999876556789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEE----------------------------ecCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|+++++|++||||..                            +..+|+|+||+++++   +++|+++++++||++++
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  150 (340)
T 3s2e_A           71 AVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILC  150 (340)
T ss_dssp             EECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGT
T ss_pred             EECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccc
Confidence            99999999999999942                            224699999999999   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      .+.|||+++ +..+++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|++.++++++.++   .+.
T Consensus       151 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~---~~~  225 (340)
T 3s2e_A          151 AGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDP---AAW  225 (340)
T ss_dssp             HHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHH
T ss_pred             hhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCH---HHH
Confidence            999999999 6789999999999998 99999999999999999999999999999999999999999988776   444


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                      +.+ +.+ ++|++|||++. +.++.++++++++|+++.+|...+.. ..+...++.+++++.++....         .+.
T Consensus       226 ~~~-~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~---------~~~  293 (340)
T 3s2e_A          226 LQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDF-GTPIFDVVLKGITIRGSIVGT---------RSD  293 (340)
T ss_dssp             HHH-HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEE-EEEHHHHHHTTCEEEECCSCC---------HHH
T ss_pred             HHH-hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCC-CCCHHHHHhCCeEEEEEecCC---------HHH
Confidence            444 444 89999999985 67899999999999999999776443 245566788999999977654         477


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++++++++++|++++.+ +.|+|+++++||+.+.+++..||+|+++++
T Consensus       294 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          294 LQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999999764 678999999999999999999999999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-53  Score=383.71  Aligned_cols=316  Identities=27%  Similarity=0.417  Sum_probs=275.8

Q ss_pred             CceEEecccCCCCccccCCCCceeee-cccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||+++.++|.++.         +.+ +++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|
T Consensus        30 Mka~~~~~~g~~~~---------l~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V   99 (351)
T 1yb5_A           30 MRAVRVFEFGGPEV---------LKLRSDIAVPI-PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVI   99 (351)
T ss_dssp             EEEEEESSCSSGGG---------EEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEE
T ss_pred             EEEEEEccCCCcce---------eEEeeecCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEE
Confidence            89999998887643         555 6889999 699999999999999999999999876544567999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEecC-CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196           80 DAVGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~~-~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                      +++|+++++|++||||++... +|+|+||+++++   +++|+++++++||+++++++|||+++.+.++++++++|||+|+
T Consensus       100 ~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  179 (351)
T 1yb5_A          100 EAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA  179 (351)
T ss_dssp             EEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETC
T ss_pred             EEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECC
Confidence            999999999999999998753 699999999998   9999999999999999999999999987899999999999999


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHH
Q 019196          156 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  235 (344)
Q Consensus       156 ~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (344)
                      +|++|++++|+++..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+.+..++
T Consensus       180 sggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~---~~~~~~~~~~~~~D~vi~~~G~~~~~~~~  256 (351)
T 1yb5_A          180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNY---IDKIKKYVGEKGIDIIIEMLANVNLSKDL  256 (351)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTH---HHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchH---HHHHHHHcCCCCcEEEEECCChHHHHHHH
Confidence            999999999999999999999999999999999999999999887766   55666667777899999999998889999


Q ss_pred             hcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHH
Q 019196          236 KLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN  315 (344)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~  315 (344)
                      ++++++|+++.+|... . ..++...++.+++++.|+....   ..++.+.+.++.+.+++++|++++.++++|++++++
T Consensus       257 ~~l~~~G~iv~~g~~~-~-~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~  331 (351)
T 1yb5_A          257 SLLSHGGRVIVVGSRG-T-IEINPRDTMAKESSIIGVTLFS---STKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVA  331 (351)
T ss_dssp             HHEEEEEEEEECCCCS-C-EEECTHHHHTTTCEEEECCGGG---CCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHH
T ss_pred             HhccCCCEEEEEecCC-C-CccCHHHHHhCCcEEEEEEeec---CCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHH
Confidence            9999999999999642 2 2244456788999999876432   234555677888888999999999999999999999


Q ss_pred             HHHHH-HHcCCcceeEEEEe
Q 019196          316 LAFSA-IEDRKVIGKVMIAF  334 (344)
Q Consensus       316 ea~~~-~~~~~~~gkvvi~~  334 (344)
                      +|++. +.+++..||+|+++
T Consensus       332 ~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          332 EAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCeEEEEeC
Confidence            99998 66667789999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.8e-53  Score=382.33  Aligned_cols=307  Identities=21%  Similarity=0.280  Sum_probs=270.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+.++-          .+.+++.|.|+ |+|+||+|||.++|||++|++.+.|.++  ..+|.++|||++|+|+
T Consensus         1 MKA~v~~~~~~~----------~~~l~e~~~P~-~~p~eVLVkv~a~gic~~D~~~~~G~~~--~~~p~i~GhE~aG~V~   67 (348)
T 4eez_A            1 MKAAVVRHNPDG----------YADLVEKELRA-IKPNEALLDMEYCGVCHTDLHVAAGDFG--NKAGTVLGHEGIGIVK   67 (348)
T ss_dssp             CEEEEECSSCCS----------SEEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHTTTTC--CCTTCBCCSEEEEEEE
T ss_pred             CeEEEEEcCCCC----------cEEEEEeECCC-CCCCEEEEEEEEEEECHHHHHHhcCCCC--CCCCcccceeEEEEEE
Confidence            999999764432          25567899999 6999999999999999999999999875  3679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|+++++|++||||+..                            ..+|+|+||+.+++   +++|+++++++||++++
T Consensus        68 ~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~  147 (348)
T 4eez_A           68 EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITC  147 (348)
T ss_dssp             EECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHH
T ss_pred             EECceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhccc
Confidence            999999999999999642                            23489999999999   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      ++.|||+++ +.++++++++|||+|+ |++|.+++|+++.. |++|++++++++|+++++++|++.++++++.++   .+
T Consensus       148 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~---~~  222 (348)
T 4eez_A          148 AGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNP---VD  222 (348)
T ss_dssp             HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCH---HH
T ss_pred             ceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCH---HH
Confidence            999999998 6788999999999998 99999999999876 679999999999999999999999999999888   67


Q ss_pred             HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          209 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      ++.+.+++.++|.+++|+++ ..+..++.+++++|+++.+|...... ..+...++.+++++.|+..++         .+
T Consensus       223 ~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~gs~~~~---------~~  292 (348)
T 4eez_A          223 EIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEM-TLSVPTVVFDGVEVAGSLVGT---------RL  292 (348)
T ss_dssp             HHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEE-EECHHHHHHSCCEEEECCSCC---------HH
T ss_pred             HhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCC-ccCHHHHHhCCeEEEEEecCC---------HH
Confidence            78888889999999999876 56789999999999999999765443 356667889999999987654         46


Q ss_pred             HHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      .++++++++++|++++.+ ++|+|+++++||+.+.+++..||+||+|+.
T Consensus       293 ~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          293 DLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             HHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             HHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence            789999999999999755 789999999999999999999999999974

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-53  Score=381.13  Aligned_cols=318  Identities=25%  Similarity=0.326  Sum_probs=275.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+
T Consensus         2 Mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~   70 (327)
T 1qor_A            2 ATRIEFHKHGGPEV---------LQAVEFTPAD-PAENEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVS   70 (327)
T ss_dssp             CEEEEBSSCCSGGG---------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEE
T ss_pred             cEEEEEcCCCChhh---------eEEeccCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCceeEEEEE
Confidence            99999999887643         5567899999 6999999999999999999999998764 24579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec--CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196           81 AVGPNVSNFKVGDTVCGFA--ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~--~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                      ++|+++++|++|||| ++.  .+|+|+||+++++   +++|+++++++||+++++++|||+++.+.++++++++|||+|+
T Consensus        71 ~vG~~v~~~~~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           71 KVGSGVKHIKAGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             EECTTCCSCCTTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             EECCCCCCCCCCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence            999999999999999 444  4599999999998   9999999999999999999999999977889999999999998


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHH
Q 019196          156 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  235 (344)
Q Consensus       156 ~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (344)
                      +|++|++++|+++..|++|+++++++++.+.++++|++.++++.+.+.   .+.+.+.+.+.++|++|||+|.+.++.++
T Consensus       150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~D~vi~~~g~~~~~~~~  226 (327)
T 1qor_A          150 AGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDL---VERLKEITGGKKVRVVYDSVGRDTWERSL  226 (327)
T ss_dssp             TBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCH---HHHHHHHTTTCCEEEEEECSCGGGHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccH---HHHHHHHhCCCCceEEEECCchHHHHHHH
Confidence            899999999999999999999999999999999999999999887766   55666667667899999999988899999


Q ss_pred             hcccCCCEEEEEeccCCCCCCcchhhhhcc-ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeee--eeechh
Q 019196          236 KLLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHIS--HTYSPS  312 (344)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~--~~~~l~  312 (344)
                      ++++++|+++.+|...+....++...++.+ ++++.+...+.+. ..++...+.++++++++++|++++.++  ++|+++
T Consensus       227 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~  305 (327)
T 1qor_A          227 DCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKYPLK  305 (327)
T ss_dssp             HTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHC-CSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGG
T ss_pred             HHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhc-CCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHH
Confidence            999999999999987654334555566677 7777765433222 233344678999999999999999888  999999


Q ss_pred             hHHHHHHHHHcCCcceeEEEEe
Q 019196          313 EANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       313 ~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++||+.+.+++..||+|+++
T Consensus       306 ~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          306 DAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             GHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999988889999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.7e-54  Score=385.27  Aligned_cols=317  Identities=27%  Similarity=0.389  Sum_probs=274.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-CCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V   79 (344)
                      |||+++.+++.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|.... ...+|.++|||++|+|
T Consensus         8 mka~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V   75 (343)
T 3gaz_A            8 MIAAVVEEANGP-----------FVLRKLARPQ-PAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTV   75 (343)
T ss_dssp             EEEEEECSTTCC-----------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEE
T ss_pred             heEEEEecCCCc-----------eEEEeccCCC-CCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEE
Confidence            899999998874           5567899999 69999999999999999999999886532 2568999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec-----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           80 DAVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~-----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                      +++|+++++|++||||++..     .+|+|+||+++++   +++|+++++++||+++.+++|||+++.+.++++++++||
T Consensus        76 ~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  155 (343)
T 3gaz_A           76 VAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVL  155 (343)
T ss_dssp             EEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             EEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEE
Confidence            99999999999999999875     3699999999998   999999999999999999999999998889999999999


Q ss_pred             EecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH
Q 019196          152 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT  231 (344)
Q Consensus       152 I~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (344)
                      |+|++|++|++++|+|+..|++|+++ .++++++.++++|++. ++ ++.++   .+.+.+.+.+.++|++|||+|++.+
T Consensus       156 V~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~---~~~~~~~~~~~g~D~vid~~g~~~~  229 (343)
T 3gaz_A          156 IQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREP---EDYAAEHTAGQGFDLVYDTLGGPVL  229 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCH---HHHHHHHHTTSCEEEEEESSCTHHH
T ss_pred             EecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCH---HHHHHHHhcCCCceEEEECCCcHHH
Confidence            99988999999999999999999999 8899999999999998 77 66665   5566667778899999999999999


Q ss_pred             HHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc--ccccCchhHHHHHHHHHHHHHCCceeEeee-ee
Q 019196          232 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVLEDSLRELLLWAAKGLITIHIS-HT  308 (344)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~-~~  308 (344)
                      ..++++++++|+++.+|...    ..+...++.+++++.++....  +....+....+.++++++++++|++++.++ ++
T Consensus       230 ~~~~~~l~~~G~iv~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  305 (343)
T 3gaz_A          230 DASFSAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRT  305 (343)
T ss_dssp             HHHHHHEEEEEEEEESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCC
T ss_pred             HHHHHHHhcCCeEEEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcE
Confidence            99999999999999998654    234456778999999876432  122234455688999999999999999888 79


Q ss_pred             echhhHHHHHHHHHcCCc----ceeEEEEecCCCC
Q 019196          309 YSPSEANLAFSAIEDRKV----IGKVMIAFDDMKS  339 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~----~gkvvi~~~~~~~  339 (344)
                      |+++++++||+.+.+++.    .||+|++.+.+++
T Consensus       306 ~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~~~  340 (343)
T 3gaz_A          306 FSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGHHH  340 (343)
T ss_dssp             EETTCHHHHHHHHHTCTTCCCCSSBCEEECC----
T ss_pred             ecHHHHHHHHHHHHcCCCcccccceEEEEeccccc
Confidence            999999999999998765    6799999887654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=5.7e-55  Score=393.03  Aligned_cols=318  Identities=20%  Similarity=0.227  Sum_probs=272.6

Q ss_pred             CceEEec--ccC-CCCccccCCCCceeeeccc---------CCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCC
Q 019196            1 MEALVCR--KLG-DPTVSIHDEKSPIVLSKTE---------PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLP   68 (344)
Q Consensus         1 m~a~~~~--~~~-~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p   68 (344)
                      |||++++  +++ .++.         +.++++         |.|+ |+++||+|||.+++||++|++.+.|.++....+|
T Consensus        11 mka~~~~~~~~~~~~~~---------l~~~~~~~~~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A           11 MKALLLVGDGYTKTPSG---------SALEAMEPYLEQGRIAVPA-PGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             EEEEEECSCBSCSSCCC---------SCCCCSTTTEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             heEEEEEccccCCCccc---------ceEEEeecccccccCCCCC-CCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            8999999  552 3332         444566         9999 6999999999999999999999999876556789


Q ss_pred             cccCcceeEEEEEeCCCC-CCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHh
Q 019196           69 FVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHR  141 (344)
Q Consensus        69 ~~~G~e~~G~V~~~g~~~-~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~  141 (344)
                      +++|||++|+|+++|+++ ++|++||||++..   .+|+|+||+++++   +++|+++++++||++++.++|||+++ +.
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~  159 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DI  159 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HH
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HH
Confidence            999999999999999999 9999999999875   5799999999998   99999999999999999999999665 55


Q ss_pred             cCCCCC-CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          142 AQLSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       142 ~~~~~~-~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ++ +++ ++|||+|++|++|++++|+|+..|++|++++++++++++++++|++.++++++.++   .+.+.+.+.+.++|
T Consensus       160 ~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          160 VK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDF---EATLREVMKAEQPR  235 (349)
T ss_dssp             HH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTH---HHHHHHHHHHHCCC
T ss_pred             Hh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHH---HHHHHHHhcCCCCc
Confidence            66 566 79999999999999999999999999999999999999999999999999988777   55666666667899


Q ss_pred             EEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcch-hhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCC
Q 019196          221 VLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG  299 (344)
Q Consensus       221 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  299 (344)
                      ++|||+|.+.+..++++++++|+++.+|...+.....+. ..++.+++++.+++...+....+....+.++++++++++|
T Consensus       236 ~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g  315 (349)
T 3pi7_A          236 IFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDG  315 (349)
T ss_dssp             EEEESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTS
T ss_pred             EEEECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcC
Confidence            999999998889999999999999999976654444555 6778899999998877665555556678899999999999


Q ss_pred             ceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          300 LITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       300 ~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++.++++|+++++++||+. .+++..||+|+++
T Consensus       316 ~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          316 RWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             SCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             CcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            999999999999999999995 4455679999974

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.1e-53  Score=382.29  Aligned_cols=305  Identities=23%  Similarity=0.384  Sum_probs=270.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-CCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V   79 (344)
                      |||++++++|++           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|
T Consensus         1 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V   68 (345)
T 3jv7_A            1 MKAVQYTEIGSE-----------PVVVDIPTPT-PGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTV   68 (345)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEE
T ss_pred             CeEEEEcCCCCc-----------eEEEEecCCC-CCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEE
Confidence            999999999874           4457899999 69999999999999999999999987642 3468999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec--------------------------------CCCceeeEEeec-c---cCCCCCCCHHH
Q 019196           80 DAVGPNVSNFKVGDTVCGFA--------------------------------ALGSFAQFIVAD-Q---FPVPKGCDLLA  123 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~--------------------------------~~g~~~~~~~~~-~---~~~P~~~~~~~  123 (344)
                      +++|+++++|++||||++..                                .+|+|+||++++ .   +++|+ +++++
T Consensus        69 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~  147 (345)
T 3jv7_A           69 AELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVA  147 (345)
T ss_dssp             EEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHH
T ss_pred             EEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHH
Confidence            99999999999999998632                                469999999999 5   99999 99999


Q ss_pred             HhhccchHHHHHHHHHH-hcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCC
Q 019196          124 AAALPVAFGTSHVALVH-RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNE  201 (344)
Q Consensus       124 aa~l~~~~~ta~~~l~~-~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~  201 (344)
                      ||+++++++|||+++.+ ..+++++++|||+|+ |++|++++|+|+.+ +++|++++++++|+++++++|++.++++++ 
T Consensus       148 aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-  225 (345)
T 3jv7_A          148 AAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-  225 (345)
T ss_dssp             HGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-
T ss_pred             hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-
Confidence            99999999999999976 458999999999998 99999999999999 679999999999999999999999999866 


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                      ++   .+++.+.+.+.++|++|||+|.+ .++.++++++++|+++.+|...+....++. .++.+++++.++....    
T Consensus       226 ~~---~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~----  297 (345)
T 3jv7_A          226 GA---ADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGT----  297 (345)
T ss_dssp             TH---HHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCC----
T ss_pred             cH---HHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCC----
Confidence            55   56677778888999999999986 889999999999999999987653333443 6789999999877654    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                           .+.++++++++++|++++ ++++|+++++++||+.+.+++..||+|+++
T Consensus       298 -----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          298 -----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             -----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             -----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence                 478999999999999998 458999999999999999999999999863

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.5e-53  Score=380.72  Aligned_cols=304  Identities=25%  Similarity=0.372  Sum_probs=264.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC--CCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~   78 (344)
                      |||++++++|..           +.++++|.|++|+++||+|||.+++||++|++.+.|.++  ....+|+++|||++|+
T Consensus        16 mka~~~~~~g~~-----------l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   84 (359)
T 1h2b_A           16 LKAARLHEYNKP-----------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGY   84 (359)
T ss_dssp             -CEEEESSTTSC-----------CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEE
T ss_pred             ceEEEEecCCCC-----------cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEE
Confidence            899999988743           445789999823999999999999999999999998653  1236799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHh---
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAA---  125 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa---  125 (344)
                      |+++|+++++|++||||+++.                           .+|+|+||+++++   +++|+++++++||   
T Consensus        85 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~  164 (359)
T 1h2b_A           85 IEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMA  164 (359)
T ss_dssp             EEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTG
T ss_pred             EEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhcc
Confidence            999999999999999998753                           3599999999998   9999999999999   


Q ss_pred             hccchHHHHHHHHHHh-cCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          126 ALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~-~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      .+++++.|||+++... ++++++++|||+|+ |++|++++|+|+.+ |++|++++++++|+++++++|+++++++++. +
T Consensus       165 ~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~  242 (359)
T 1h2b_A          165 PLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-P  242 (359)
T ss_dssp             GGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-H
T ss_pred             chhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-H
Confidence            7888999999999665 89999999999999 99999999999999 9999999999999999999999999998876 5


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCChh---hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGGK---LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                         .+.+.+.+.+.++|++|||+|.+   .+..++++  ++|+++.+|...+.  .++...++.+++++.|+....    
T Consensus       243 ---~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~~~~~----  311 (359)
T 1h2b_A          243 ---VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVGN----  311 (359)
T ss_dssp             ---HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEECCSCC----
T ss_pred             ---HHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEecCCC----
Confidence               45556667666899999999986   77788887  99999999976544  455566788999999876433    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                           .+.++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus       312 -----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          312 -----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             -----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence                 46789999999999999888 9999999999999999998889999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.1e-54  Score=383.88  Aligned_cols=312  Identities=23%  Similarity=0.277  Sum_probs=270.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus         1 MkA~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   70 (324)
T 3nx4_A            1 MQALILEQQDGKTL---------ASVQHLEESQ-LPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVH   70 (324)
T ss_dssp             CEEEEEEESSSSEE---------EEEEECCGGG-SCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEE
T ss_pred             CceEEEecCCCCce---------eeEeecCCCC-CCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEE
Confidence            99999999998754         6678999999 6999999999999999999999999876556789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHH--hcCCCCCC-
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVH--RAQLSSGQ-  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~-  148 (344)
                      ++|  +++|++||||++..      .+|+|+||+++++   +++|+++++++||+++..+.|||+++..  ..++++++ 
T Consensus        71 ~~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g  148 (324)
T 3nx4_A           71 ASE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDG  148 (324)
T ss_dssp             EES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             EeC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCC
Confidence            998  57899999999753      5699999999999   9999999999999999999999999863  34566632 


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|++|++++|+|+.+|++|++++++++|+++++++|+++++++++.+.       .+...+.++|++|||+|+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~-------~~~~~~~~~d~v~d~~g~  221 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE-------SRPLEKQLWAGAIDTVGD  221 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC-------CCSSCCCCEEEEEESSCH
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH-------HHhhcCCCccEEEECCCc
Confidence            4999999999999999999999999999999999999999999999999766443       111234589999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      +.++.++++++++|+++.+|...+.....+...++.+++++.|++....   .+....+.++.+++++++|++++. +++
T Consensus       222 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~-~~~  297 (324)
T 3nx4_A          222 KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMT---PPARRAEAWARLVKDLPESFYAQA-ATE  297 (324)
T ss_dssp             HHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTC---CHHHHHHHHHHHHHHSCHHHHHHH-EEE
T ss_pred             HHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEecccc---ChHHHHHHHHHHHHHHHcCCCCCC-cee
Confidence            9999999999999999999987654334555667889999999864332   334446789999999999999987 999


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEec
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      |+++++++||+.+.+++..||+|++++
T Consensus       298 ~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          298 ITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             EEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999999999999999875

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.9e-52  Score=377.85  Aligned_cols=316  Identities=26%  Similarity=0.297  Sum_probs=270.7

Q ss_pred             CceEEecccC---CCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeE
Q 019196            1 MEALVCRKLG---DPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG   77 (344)
Q Consensus         1 m~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G   77 (344)
                      |||+++++++   +++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|
T Consensus        23 MkA~~~~~~~~~~~~~~---------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G   91 (363)
T 4dvj_A           23 MKAVGYNKPAPITDDAS---------LLDIELPKPA-PAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAG   91 (363)
T ss_dssp             EEEEEBSSCCCTTSTTS---------SEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEE
T ss_pred             eEEEEEeccCCCCCCce---------EEEeecCCCC-CCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEE
Confidence            8999999884   3332         5667899999 69999999999999999999999998653 4679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEec---CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCC-----C
Q 019196           78 TVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS-----S  146 (344)
Q Consensus        78 ~V~~~g~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~  146 (344)
                      +|+++|+++++|++||||++..   .+|+|+||+++++   +++|+++++++||+++.+++|||+++.+.++++     +
T Consensus        92 ~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~  171 (363)
T 4dvj_A           92 IVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGA  171 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTS
T ss_pred             EEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCC
Confidence            9999999999999999999753   4699999999998   999999999999999999999999998888888     8


Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++|||+|++|++|++++|+|+. .|++|++++++++++++++++|++.++++++ ++   .+.+.+. .+.++|++|||
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~---~~~v~~~-~~~g~Dvvid~  246 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PL---AAEVAAL-GLGAPAFVFST  246 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CH---HHHHHTT-CSCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CH---HHHHHHh-cCCCceEEEEC
Confidence            99999999889999999999998 4889999999999999999999999998865 34   3444443 66799999999


Q ss_pred             CChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccc---ccCchhHHHHHHHHHHHHHCCce
Q 019196          226 VGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK---IHRPHVLEDSLRELLLWAAKGLI  301 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~i  301 (344)
                      +|++ .++.++++++++|+++.+|..    ...+...+..+++++.++......   ........+.++++++++++|++
T Consensus       247 ~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  322 (363)
T 4dvj_A          247 THTDKHAAEIADLIAPQGRFCLIDDP----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRL  322 (363)
T ss_dssp             SCHHHHHHHHHHHSCTTCEEEECSCC----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSS
T ss_pred             CCchhhHHHHHHHhcCCCEEEEECCC----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCe
Confidence            9985 789999999999999998643    235556678899999886654321   11223346789999999999999


Q ss_pred             eEeeeeee---chhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          302 TIHISHTY---SPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       302 ~~~~~~~~---~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++.++++|   +++++++||+.+.+++..||+|+++.+
T Consensus       323 ~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          323 RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence            98887766   999999999999999999999999865

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.4e-52  Score=377.46  Aligned_cols=309  Identities=22%  Similarity=0.302  Sum_probs=264.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|..            .++++|.|++|+||||+|||.++|||++|++.+.|..+  ..+|+++|||++|+|+
T Consensus         1 MkAvv~~~~g~l------------~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~--~~~P~i~G~E~~G~V~   66 (346)
T 4a2c_A            1 MKSVVNDTDGIV------------RVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA--HYYPITLGHEFSGYID   66 (346)
T ss_dssp             CEEEEECSSSCE------------EEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS--SSSSBCCCCEEEEEEE
T ss_pred             CCEEEEecCCCE------------EEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC--CCCCccccEEEEEEEE
Confidence            999999999874            45899999977899999999999999999999988654  4689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe---------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|++++++++||+|++.                           ..+|+|+||+++++   +++|+++++++||+++ +
T Consensus        67 ~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~  145 (346)
T 4a2c_A           67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-P  145 (346)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-H
T ss_pred             EECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-H
Confidence            999999999999999652                           24599999999999   9999999999999763 5


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      +.+++++ ....+++++++|||+|+ |++|++++|+|+.+|++ +++++++++|+++++++|+++++++++.+.   .+.
T Consensus       146 ~~~~~~~-~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~---~~~  220 (346)
T 4a2c_A          146 ITVGLHA-FHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSA---PQM  220 (346)
T ss_dssp             HHHHHHH-HHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHH
T ss_pred             HHHHHHH-HHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCH---HHH
Confidence            5555554 47889999999999998 99999999999999995 577888999999999999999999998877   455


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCC--CCcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                      ....+.+.++|+++||+|. ..++.++++++++|+++.+|...++.  ...+...++.+++++.|++........    .
T Consensus       221 ~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~----~  296 (346)
T 4a2c_A          221 QSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWP----G  296 (346)
T ss_dssp             HHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTT----C
T ss_pred             HHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcch----H
Confidence            5566778899999999996 57789999999999999999876543  234455678999999997654322111    3


Q ss_pred             HHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          287 DSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       287 ~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      +.++++++++++|+++  +.++++|+|+++++||+.+.+++..||+||.
T Consensus       297 ~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          297 QEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             HHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             HHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence            6788999999999986  4588999999999999999999999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.5e-52  Score=374.23  Aligned_cols=306  Identities=27%  Similarity=0.393  Sum_probs=266.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|+.           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~   68 (339)
T 1rjw_A            1 MKAAVVEQFKEP-----------LKIKEVEKPT-ISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVE   68 (339)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             CeEEEEcCCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEE
Confidence            999999998843           3457899999 6999999999999999999999998765445679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|+++++|++||||+..                            ..+|+|+||+++++   +++|+++++++||++++
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  148 (339)
T 1rjw_A           69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFC  148 (339)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGT
T ss_pred             EECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhh
Confidence            999999999999999752                            13599999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      ++.|||+++.. .+++++++|||+|+ |++|++++|+|+..|++|+++++++++++.++++|++.++++.+.++   .+.
T Consensus       149 ~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~---~~~  223 (339)
T 1rjw_A          149 AGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDA---AKF  223 (339)
T ss_dssp             HHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCH---HHH
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccH---HHH
Confidence            99999999954 58999999999999 89999999999999999999999999999999999999999887666   444


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHH
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS  288 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (344)
                      +.+.+  .++|++|||+|. ..++.++++++++|+++.+|...+. ..++...++.+++++.|+....         .+.
T Consensus       224 ~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~~  291 (339)
T 1rjw_A          224 MKEKV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIGSIVGT---------RKD  291 (339)
T ss_dssp             HHHHH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSCC---------HHH
T ss_pred             HHHHh--CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEEeccCC---------HHH
Confidence            55555  489999999997 7788999999999999999977644 2345556778999999876433         367


Q ss_pred             HHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          289 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       289 ~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++++++++++|++++. +++|+++++++||+.+.+++..||+|+++++
T Consensus       292 ~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          292 LQEALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            8999999999999876 4799999999999999998888999999854

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.8e-53  Score=384.25  Aligned_cols=321  Identities=27%  Similarity=0.340  Sum_probs=268.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|.+.        ..+.+++.|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus        27 mka~~~~~~g~~~--------~~l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~   97 (357)
T 1zsy_A           27 VRALVYGHHGDPA--------KVVELKNLELAA-VRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVV   97 (357)
T ss_dssp             EEEEEESSSSCHH--------HHEEEEEECCCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEE
T ss_pred             hEEEEEecCCCcc--------ceEEEeeccCCC-CCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEE
Confidence            7999999988741        124567889998 6999999999999999999999999776444679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      ++|+++++|++||||++.. .+|+|+||+++++   +++|+++++++||+++++++|||+++...++++++++|||+|++
T Consensus        98 ~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~  177 (357)
T 1zsy_A           98 AVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASN  177 (357)
T ss_dssp             EECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTT
T ss_pred             EeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCc
Confidence            9999999999999999875 3599999999998   99999999999999999999999999888899999999999999


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCH----HHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCC-CccEEEeCCChhhH
Q 019196          157 GGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLK-GVDVLYDPVGGKLT  231 (344)
Q Consensus       157 g~~G~~~~~~~~~~g~~v~~~~~~~----~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~  231 (344)
                      |++|++++|+|+.+|+++++++++.    +++++++++|++.++++++..    ...+.+.+.+. ++|++|||+|++..
T Consensus       178 G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~----~~~~~~~~~~~~~~Dvvid~~g~~~~  253 (357)
T 1zsy_A          178 SGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR----RPEMKNFFKDMPQPRLALNCVGGKSS  253 (357)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH----SGGGGGTTSSSCCCSEEEESSCHHHH
T ss_pred             CHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch----HHHHHHHHhCCCCceEEEECCCcHHH
Confidence            9999999999999999988877553    356788999999999864311    01222333332 69999999999877


Q ss_pred             HHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc-cCchhHHHHHHHHHHHHHCCceeEeeeeeec
Q 019196          232 KESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITIHISHTYS  310 (344)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~  310 (344)
                      ..++++++++|+++.+|...+....++...++.+++++.+++...+.. ..+....+.++++++++++|++++.+.++|+
T Consensus       254 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  333 (357)
T 1zsy_A          254 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVP  333 (357)
T ss_dssp             HHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEE
T ss_pred             HHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEc
Confidence            789999999999999986544333455566778999999987654322 2344456788999999999999988779999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEEe
Q 019196          311 PSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       311 l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ++++++||+.+.+++..||+|+++
T Consensus       334 l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          334 LQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999999999888889999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=3.4e-53  Score=377.13  Aligned_cols=303  Identities=29%  Similarity=0.406  Sum_probs=262.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhc--CC--CCCCCCcccCccee
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK--YQ--EKPPLPFVPGSDYS   76 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~--~~--~~~~~p~~~G~e~~   76 (344)
                      |||+++.++|.++.         +.+++.|.|+ |+++||+|||.+++||++|++.+.|.  ++  ....+|.++|||++
T Consensus         7 Mka~~~~~~g~~~~---------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~   76 (321)
T 3tqh_A            7 MKAIQFDQFGPPKV---------LKLVDTPTPE-YRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFS   76 (321)
T ss_dssp             EEEEEESSSCSGGG---------EEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEE
T ss_pred             ceEEEEccCCCcce---------eEEEecCCCC-CCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeE
Confidence            89999999998754         6677899999 69999999999999999999998882  11  13467999999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEec----CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Q 019196           77 GTVDAVGPNVSNFKVGDTVCGFA----ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV  149 (344)
Q Consensus        77 G~V~~~g~~~~~~~~Gd~V~~~~----~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~  149 (344)
                      |+|+++|+++++|++||||+++.    .+|+|+||+++++   +++|+++++++||+++++++|||+++ +.++++++++
T Consensus        77 G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~  155 (321)
T 3tqh_A           77 GEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDV  155 (321)
T ss_dssp             EEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCE
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCE
Confidence            99999999999999999999874    3699999999999   99999999999999999999999999 8899999999


Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      |||+|++|++|++++|+|+.+|++|++++ +++++++++++|+++++++++.+ +   .+.      -.++|++|||+|+
T Consensus       156 vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~---~~~------~~g~D~v~d~~g~  225 (321)
T 3tqh_A          156 VLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFL---LAI------STPVDAVIDLVGG  225 (321)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHH---HHC------CSCEEEEEESSCH
T ss_pred             EEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchh---hhh------ccCCCEEEECCCc
Confidence            99999889999999999999999999987 46678999999999999988876 4   111      1589999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      +....++++++++|+++.+|......   ....+..+++++.++....    .    .+.++++++++++|++++.++++
T Consensus       226 ~~~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~l~~~g~l~~~i~~~  294 (321)
T 3tqh_A          226 DVGIQSIDCLKETGCIVSVPTITAGR---VIEVAKQKHRRAFGLLKQF----N----IEELHYLGKLVSEDKLRIEISRI  294 (321)
T ss_dssp             HHHHHHGGGEEEEEEEEECCSTTHHH---HHHHHHHTTCEEECCCCCC----C----HHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             HHHHHHHHhccCCCEEEEeCCCCchh---hhhhhhhcceEEEEEecCC----C----HHHHHHHHHHHHCCCcccccccE
Confidence            88899999999999999987543221   1223567788887743211    1    46799999999999999999999


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEec
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      |+++++++||+.+.+++..||+|++++
T Consensus       295 ~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          295 FQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             ECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999999999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.5e-53  Score=384.75  Aligned_cols=322  Identities=22%  Similarity=0.299  Sum_probs=270.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCC--CCeEEEEEEEeecChhhHHHHHhcCCCCCCCC---------c
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS--STAVRVRVKATSLNYANYLQILGKYQEKPPLP---------F   69 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p---------~   69 (344)
                      |||++++++|.+.        ..+.++++|.|+ |+  ++||+|||.+++||++|++.+.|.++....+|         +
T Consensus         4 mka~~~~~~g~~~--------~~l~~~~~~~P~-p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~   74 (364)
T 1gu7_A            4 AQAVLYTQHGEPK--------DVLFTQSFEIDD-DNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA   74 (364)
T ss_dssp             EEEEEESSCSCHH--------HHCEEEEEEECT-TSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBE
T ss_pred             EEEEEeccCCCch--------heeEEeeccCCC-CCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccc
Confidence            8999999988631        113456788787 46  99999999999999999999998765434567         8


Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCC-----------CCCHHHHhhccchHHHH
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPK-----------GCDLLAAAALPVAFGTS  134 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~-----------~~~~~~aa~l~~~~~ta  134 (344)
                      ++|||++|+|+++|+++++|++||||++.. .+|+|+||+++++   +++|+           ++++++||+++++++||
T Consensus        75 i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta  154 (364)
T 1gu7_A           75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTA  154 (364)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHH
T ss_pred             ccCceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHH
Confidence            999999999999999999999999999875 4599999999998   99998           89999999999999999


Q ss_pred             HHHHHHhcCCCCC-CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH----HHHHHhcCCcEEEeCCC---CCchhh
Q 019196          135 HVALVHRAQLSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDHVVDLSN---ESVIPS  206 (344)
Q Consensus       135 ~~~l~~~~~~~~~-~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~g~~~v~~~~~---~~~~~~  206 (344)
                      |+++.+.++++++ ++|||+|++|++|++++|+|+.+|+++++++++.++    ++.++++|+++++++++   .++   
T Consensus       155 ~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~---  231 (364)
T 1gu7_A          155 YLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREF---  231 (364)
T ss_dssp             HHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGG---
T ss_pred             HHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHH---
Confidence            9999776789999 999999999999999999999999999998866554    67789999999998764   444   


Q ss_pred             HHHHHHHh--cCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchh
Q 019196          207 VKEFLKAR--KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV  284 (344)
Q Consensus       207 ~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (344)
                      .+.+.+.+  .+.++|++|||+|++....++++++++|+++.+|...+....++...++.+++++.++....+....+..
T Consensus       232 ~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  311 (364)
T 1gu7_A          232 GPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKEL  311 (364)
T ss_dssp             HHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHH
T ss_pred             HHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHH
Confidence            45555556  5678999999999977778899999999999999765433335555677899999998765544445555


Q ss_pred             HHHHHHHHHHHHHCCceeEeeeeeech---hhHHHHHHHHHcCCcceeEEEEe
Q 019196          285 LEDSLRELLLWAAKGLITIHISHTYSP---SEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       285 ~~~~~~~~~~~l~~g~i~~~~~~~~~l---~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ..+.++++++++++|++++.+...|++   +++++||+.+.+++..||+|+++
T Consensus       312 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          312 KTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            567899999999999999866667766   49999999999988899999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.1e-52  Score=380.18  Aligned_cols=310  Identities=20%  Similarity=0.315  Sum_probs=266.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++ ...+|+++|||++|+|+
T Consensus         9 mkA~v~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~V~   75 (378)
T 3uko_A            9 CKAAVAYEPNKP-----------LVIEDVQVAP-PQAGEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVE   75 (378)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCc-----------cEEEEecCCC-CCCCeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCccceEEEE
Confidence            899999998874           4568899999 6999999999999999999999998764 35689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC-------------------------------------------------CCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGFAA-------------------------------------------------LGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~  111 (344)
                      ++|+++++|++||||++...                                                 .|+|+||++++
T Consensus        76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  155 (378)
T 3uko_A           76 SVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVH  155 (378)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             EeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEec
Confidence            99999999999999986432                                                 16999999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      +   +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++|++++
T Consensus       156 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          156 DVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             GGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             hhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            8   9999999999999999999999999988899999999999998 9999999999999999 899999999999999


Q ss_pred             HhcCCcEEEeCC--CCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCC-Ccchhhh
Q 019196          188 KSLGVDHVVDLS--NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIP-VIPANIA  262 (344)
Q Consensus       188 ~~~g~~~v~~~~--~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~  262 (344)
                      +++|+++++++.  +.++   .+.+.+.+.+ ++|++|||+|. +.+..++++++++ |+++.+|....... ..+...+
T Consensus       235 ~~lGa~~vi~~~~~~~~~---~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~  310 (378)
T 3uko_A          235 KKFGVNEFVNPKDHDKPI---QEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL  310 (378)
T ss_dssp             HTTTCCEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHH
T ss_pred             HHcCCcEEEccccCchhH---HHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHH
Confidence            999999999987  4555   5556666766 99999999998 5789999999996 99999997653222 1222333


Q ss_pred             hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      + +++++.|+..+.+.      ..+.+.++++++++|++++  .++++|+|+++++||+.+.+++.. |+|+++++
T Consensus       311 ~-~~~~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          311 V-TGRVWKGTAFGGFK------SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             H-TTCEEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             h-cCcEEEEEEecCCC------chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence            3 48888887654321      1467899999999999984  589999999999999999988866 99999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.9e-52  Score=371.92  Aligned_cols=308  Identities=24%  Similarity=0.356  Sum_probs=266.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|..           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus         6 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   73 (347)
T 2hcy_A            6 QKGVIFYESHGK-----------LEYKDIPVPK-PKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVV   73 (347)
T ss_dssp             EEEEEESSTTCC-----------CEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEE
T ss_pred             cEEEEEeCCCCC-----------CEEEEeeCCC-CCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEE
Confidence            899999988843           3457899999 6999999999999999999999998765445679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|+++++|++||||++.                            ..+|+|+||+++++   +++|+++++++||++++
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  153 (347)
T 2hcy_A           74 GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILC  153 (347)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGT
T ss_pred             EECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhh
Confidence            999999999999999752                            13589999999998   99999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC-CCCchhhHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS-NESVIPSVK  208 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~  208 (344)
                      ++.|||+++. ..+++++++|||+|++|++|++++++++..|++|+++++++++.+.++++|++.++++. ..++   .+
T Consensus       154 ~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~  229 (347)
T 2hcy_A          154 AGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDI---VG  229 (347)
T ss_dssp             HHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCH---HH
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhH---HH
Confidence            9999999995 45899999999999999999999999999999999999999999999999999999877 3444   34


Q ss_pred             HHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHH
Q 019196          209 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED  287 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (344)
                      .+.+.+.+ ++|++||++|. +.++.++++++++|+++.+|...+....++...++.+++++.|+....         .+
T Consensus       230 ~~~~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~  299 (347)
T 2hcy_A          230 AVLKATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---------RA  299 (347)
T ss_dssp             HHHHHHTS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCC---------HH
T ss_pred             HHHHHhCC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCC---------HH
Confidence            44455555 89999999997 778899999999999999997664323355556778999999876443         36


Q ss_pred             HHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          288 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       288 ~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      .++++++++++|++++. +++|+++++++||+.+.+++..||+|++++
T Consensus       300 ~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          300 DTREALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             HHHHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             HHHHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            78899999999999876 479999999999999999888899999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.8e-52  Score=375.37  Aligned_cols=299  Identities=21%  Similarity=0.284  Sum_probs=262.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         5 mka~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~   71 (348)
T 3two_A            5 SKGFAIFSKDEH-----------FKPHDFSRHA-VGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIK   71 (348)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEccCCCC-----------CeEEEeeCCC-CCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEE
Confidence            899999988754           5568899999 69999999999999999999999987653 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------CCCceeeEEeecc---cCCCCCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFA-------------------------------------ALGSFAQFIVADQ---FPVPKGCD  120 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~---~~~P~~~~  120 (344)
                      ++|+++++|++||||+...                                     .+|+|+||+++++   +++|++++
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  151 (348)
T 3two_A           72 EVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAP  151 (348)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSC
T ss_pred             EECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCC
Confidence            9999999999999997521                                     1299999999999   99999999


Q ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC
Q 019196          121 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN  200 (344)
Q Consensus       121 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~  200 (344)
                      +++||++++.+.|||+++. ..+++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|++.++ .+ 
T Consensus       152 ~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~-  227 (348)
T 3two_A          152 LEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TD-  227 (348)
T ss_dssp             HHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SS-
T ss_pred             HHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CC-
Confidence            9999999999999999995 569999999999998 9999999999999999999999999999999999999988 32 


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccC-CCCCCcchhhhh-ccceEEEEEEeccc
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS-GEIPVIPANIAL-VKNWTVHGLYWGSY  277 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~  277 (344)
                      .+.   +        ..++|++|||+|.+ .++.++++++++|+++.+|... +....++...++ .+++++.|+..+. 
T Consensus       228 ~~~---~--------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-  295 (348)
T 3two_A          228 PKQ---C--------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG-  295 (348)
T ss_dssp             GGG---C--------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC-
T ss_pred             HHH---H--------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC-
Confidence            211   1        12899999999987 8999999999999999999876 443335555666 8999999987655 


Q ss_pred             cccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                              .+.++++++++++|++++.+ ++|+++++++||+.+.+++..||+|++++++
T Consensus       296 --------~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          296 --------IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             --------HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             --------HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence                    36789999999999999865 7999999999999999999999999999765

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.3e-52  Score=374.68  Aligned_cols=307  Identities=21%  Similarity=0.265  Sum_probs=264.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHH-HHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL-QILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||++++++++++            ++++|.|+ |+++||+|||.+++||++|++ .+.|.++  ..+|.++|||++|+|
T Consensus         1 MkA~~~~~~~~~~------------~~e~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~p~v~G~E~~G~V   65 (352)
T 3fpc_A            1 MKGFAMLSIGKVG------------WIEKEKPA-PGPFDAIVRPLAVAPCTSDIHTVFEGAIG--ERHNMILGHEAVGEV   65 (352)
T ss_dssp             CEEEEEEETTEEE------------EEECCCCC-CCTTCEEEEEEEEECCHHHHHHHHSCTTC--CCSSEECCCEEEEEE
T ss_pred             CeEEEEccCCCce------------EEeCCCCC-CCCCeEEEEeCEEeEcccchHHHhCCCCC--CCCCcccCCcceEEE
Confidence            9999999998753            46899999 699999999999999999999 5577654  357999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe------------------------------cCCCceeeEEeecc-----cCCCCCCCHHHH
Q 019196           80 DAVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQ-----FPVPKGCDLLAA  124 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~-----~~~P~~~~~~~a  124 (344)
                      +++|+++++|++||||+..                              ..+|+|+||+++++     +++|+++++++|
T Consensus        66 ~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~a  145 (352)
T 3fpc_A           66 VEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAA  145 (352)
T ss_dssp             EEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHH
T ss_pred             EEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHH
Confidence            9999999999999999852                              14599999999983     899999999999


Q ss_pred             hhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCc
Q 019196          125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV  203 (344)
Q Consensus       125 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  203 (344)
                      |+++.+++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++++++.++
T Consensus       146 a~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~  223 (352)
T 3fpc_A          146 VMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI  223 (352)
T ss_dssp             TTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCH
T ss_pred             hhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCH
Confidence            99999999999998 7899999999999997 9999999999999999 8999999999999999999999999888777


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCC-cchh--hhhccceEEEEEEeccccc
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPV-IPAN--IALVKNWTVHGLYWGSYKI  279 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~  279 (344)
                         .+.+.+.+.+.++|++|||+|. +.+..++++++++|+++.+|...+.... .+..  ....+++++.++.....  
T Consensus       224 ---~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--  298 (352)
T 3fpc_A          224 ---VEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG--  298 (352)
T ss_dssp             ---HHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCH--
T ss_pred             ---HHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCc--
Confidence               6677788888899999999998 6789999999999999999976543211 1111  12357788887654221  


Q ss_pred             cCchhHHHHHHHHHHHHHCCceeE--eeeeeec-hhhHHHHHHHHHcCCc-ceeEEEEec
Q 019196          280 HRPHVLEDSLRELLLWAAKGLITI--HISHTYS-PSEANLAFSAIEDRKV-IGKVMIAFD  335 (344)
Q Consensus       280 ~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~-l~~~~ea~~~~~~~~~-~gkvvi~~~  335 (344)
                            .+.++++++++++|++++  .++++|+ |+++++||+.+.+++. .+|+|++++
T Consensus       299 ------~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          299 ------RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             ------HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             ------hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence                  367899999999999996  4889999 9999999999998654 489999874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.8e-52  Score=371.71  Aligned_cols=301  Identities=20%  Similarity=0.242  Sum_probs=248.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++  .++         -+.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus         5 Mka~~~~~--~~~---------~l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~   71 (315)
T 3goh_A            5 HQVWAYQT--KTH---------SVTLNSVDIPA-LAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIV   71 (315)
T ss_dssp             EEEEEEET--TTT---------EEEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEE
T ss_pred             eEEEEEeC--CCC---------eeEEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEE
Confidence            89999986  222         15667899999 69999999999999999999999997753 4789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEecC---CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196           81 AVGPNVSNFKVGDTVCGFAA---LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                      ++|+++++|++||||++...   +|+|+||+++++   +++|+++++++||+++++++|||+++ +.++++++++|||+|
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G  150 (315)
T 3goh_A           72 KVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVG  150 (315)
T ss_dssp             EECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEEC
T ss_pred             EeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEEC
Confidence            99999999999999998763   699999999999   99999999999999999999999999 899999999999999


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHH
Q 019196          155 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES  234 (344)
Q Consensus       155 ~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (344)
                      + |++|++++|+|+.+|++|++++ +++++++++++|++++++  +  . +.   +     +.++|++|||+|++....+
T Consensus       151 a-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d--~-~~---v-----~~g~Dvv~d~~g~~~~~~~  215 (315)
T 3goh_A          151 F-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR--E--P-SQ---V-----TQKYFAIFDAVNSQNAAAL  215 (315)
T ss_dssp             C-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES--S--G-GG---C-----CSCEEEEECC-------TT
T ss_pred             C-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc--C--H-HH---h-----CCCccEEEECCCchhHHHH
Confidence            9 9999999999999999999999 889999999999999883  2  1 11   1     6789999999999888889


Q ss_pred             HhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc-cCch---hHHHHHHHHHHHHHCCceeEeeeeeec
Q 019196          235 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPH---VLEDSLRELLLWAAKGLITIHISHTYS  310 (344)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~l~~g~i~~~~~~~~~  310 (344)
                      +++++++|+++.+|.......    ...+.+++++....+..... ..+.   ...+.++++++++++|++++.++++|+
T Consensus       216 ~~~l~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~  291 (315)
T 3goh_A          216 VPSLKANGHIICIQDRIPAPI----DPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFR  291 (315)
T ss_dssp             GGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEE
T ss_pred             HHHhcCCCEEEEEeCCCCccc----cchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEec
Confidence            999999999999975432211    12244566666666544332 2333   345678999999999999999999999


Q ss_pred             hhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          311 PSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       311 l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++++++||+.+.  +..||+|+++++
T Consensus       292 l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          292 FEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             GGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             HHHHHHHHHHHH--hcCCcEEEEecC
Confidence            999999999998  778999999863

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-51  Score=373.47  Aligned_cols=308  Identities=27%  Similarity=0.345  Sum_probs=266.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|++           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         7 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~   72 (371)
T 1f8f_A            7 IIAAVTPCKGAD-----------FELQALKIRQ-PQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIE   72 (371)
T ss_dssp             EEEEEBCSTTCC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEE
T ss_pred             ceEEEEcCCCCC-----------eEEEEecCCC-CCCCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEEE
Confidence            899999988753           3457899999 6999999999999999999999998764  3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (344)
                      ++|+++++|++||||++..                                                 ..|+|+||++++
T Consensus        73 ~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~  152 (371)
T 1f8f_A           73 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  152 (371)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             EeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEec
Confidence            9999999999999998521                                                 248999999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      +   +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++
T Consensus       153 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          153 ENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             GGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             hhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            8   9999999999999999999999999988889999999999997 9999999999999999 699999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhcc
Q 019196          188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVK  265 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~  265 (344)
                      +++|++.++++++.++   .+.+.+.+.+ ++|++|||+|. +.++.++++++++|+++.+|..... ...++...++.+
T Consensus       232 ~~lGa~~vi~~~~~~~---~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~  307 (371)
T 1f8f_A          232 KQLGATHVINSKTQDP---VAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLG  307 (371)
T ss_dssp             HHHTCSEEEETTTSCH---HHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHT
T ss_pred             HHcCCCEEecCCccCH---HHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhC
Confidence            9999999999987776   5556666666 89999999997 6788999999999999999976532 233555667889


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      ++++.+++.+..   .+   .+.++++++++++|++++  .+++ |+|+++++||+.+.+++. +|+|++++
T Consensus       308 ~~~i~g~~~~~~---~~---~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          308 GKTILGVVEGSG---SP---KKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             TCEEEECSGGGS---CH---HHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCEEEEeCCCCC---ch---HHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            999998765432   11   467899999999999985  4777 999999999999988875 79999863

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.3e-51  Score=368.20  Aligned_cols=306  Identities=25%  Similarity=0.367  Sum_probs=266.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-------CCCCCcccCc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGS   73 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~   73 (344)
                      |||++++++|..           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++.       ...+|.++||
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~   68 (347)
T 1jvb_A            1 MRAVRLVEIGKP-----------LSLQEIGVPK-PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH   68 (347)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCC
T ss_pred             CeEEEEecCCCC-----------eEEEEeeCCC-CCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccc
Confidence            999999998743           4457899999 69999999999999999999999886542       2467999999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc----cCCCCCCCHH
Q 019196           74 DYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ----FPVPKGCDLL  122 (344)
Q Consensus        74 e~~G~V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~----~~~P~~~~~~  122 (344)
                      |++|+|+++|+++++|++||||++..                           .+|+|+||+++++    +++ ++++++
T Consensus        69 e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~  147 (347)
T 1jvb_A           69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAV  147 (347)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHH
T ss_pred             cceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHH
Confidence            99999999999999999999997642                           3599999999875    889 999999


Q ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCC
Q 019196          123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNE  201 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~  201 (344)
                      +||++++++.|||+++. .++++++++|||+|++|++|++++|+++.. |++|+++++++++++.++++|++.++++.+.
T Consensus       148 ~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~  226 (347)
T 1jvb_A          148 EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ  226 (347)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTS
T ss_pred             HcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCc
Confidence            99999999999999994 589999999999999779999999999999 9999999999999999999999999998876


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccC-CCCCCcchhhhhccceEEEEEEeccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGSYKI  279 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (344)
                      +.   .+.+.+.+...++|++|||+|.+ .++.++++++++|+++.+|... ..  .++...++.+++++.++....   
T Consensus       227 ~~---~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~---  298 (347)
T 1jvb_A          227 DP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL--HYHAPLITLSEIQFVGSLVGN---  298 (347)
T ss_dssp             CH---HHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC--CCCHHHHHHHTCEEEECCSCC---
T ss_pred             cH---HHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC--CCCHHHHHhCceEEEEEeccC---
Confidence            65   44455555424899999999986 7888999999999999999765 33  455566788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          280 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       280 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                            .+.++++++++++|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       299 ------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          299 ------QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             ------HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ------HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence                  4678999999999999998999999999999999999998889999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=9.3e-52  Score=374.62  Aligned_cols=317  Identities=21%  Similarity=0.229  Sum_probs=257.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeec-ccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSK-TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||+++.++++.            .++ ++|.|+ |+++||+|||.+++||++|++.+.+.    ..+|.++|||++|+|
T Consensus        12 mkA~v~~~~~~l------------~~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~~G~V   74 (371)
T 3gqv_A           12 QTALTVNDHDEV------------TVWNAAPCPM-LPRDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDYAGTV   74 (371)
T ss_dssp             EEEEEECTTSCE------------EEEEEECCCC-CCTTSEEEEEEEEECCGGGGC---------CCTTSCCCSEEEEEE
T ss_pred             ceeEEEcCCCce------------EEeccCCCCC-CCCCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCccccEEEE
Confidence            899999988764            346 899999 59999999999999999999988763    246899999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec--------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHh-cCC---
Q 019196           80 DAVGPNVSNFKVGDTVCGFA--------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHR-AQL---  144 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~--------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~-~~~---  144 (344)
                      +++|+++++|++||||++.+        .+|+|+||++++.   +++|+++++++||++++++.|||+++.+. .++   
T Consensus        75 ~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  154 (371)
T 3gqv_A           75 VAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSP  154 (371)
T ss_dssp             EEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCS
T ss_pred             EEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCC
Confidence            99999999999999999986        3599999999998   99999999999999999999999999777 553   


Q ss_pred             --------CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcC
Q 019196          145 --------SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       145 --------~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                              +++++|||+|++|++|++++|+|+..|++|++++ +++|+++++++|+++++++++.++   .+.+.+.+.+
T Consensus       155 ~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~---~~~v~~~t~g  230 (371)
T 3gqv_A          155 SADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNL---AQTIRTYTKN  230 (371)
T ss_dssp             SCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTH---HHHHHHHTTT
T ss_pred             ccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchH---HHHHHHHccC
Confidence                    8999999999999999999999999999999987 789999999999999999988877   5666666765


Q ss_pred             CCccEEEeCCCh-hhHHHHHhcc-cCCCEEEEEeccCCC------CC--CcchhhhhccceEEEEEEeccccccCchhHH
Q 019196          217 KGVDVLYDPVGG-KLTKESLKLL-NWGAQILVIGFASGE------IP--VIPANIALVKNWTVHGLYWGSYKIHRPHVLE  286 (344)
Q Consensus       217 ~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (344)
                       ++|++|||+|. ..+..+++++ +++|+++.+|.....      ..  ......++.+++++.|++.........+...
T Consensus       231 -~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~  309 (371)
T 3gqv_A          231 -NLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGE  309 (371)
T ss_dssp             -CCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHH
T ss_pred             -CccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHH
Confidence             49999999998 5688899999 599999999865431      00  0111245667787776543222211222345


Q ss_pred             HHHHHHHHHHHCCceeEe--eeeeechhhHHHHHHHHHcCCcce-eEEEEecCCCC
Q 019196          287 DSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIG-KVMIAFDDMKS  339 (344)
Q Consensus       287 ~~~~~~~~~l~~g~i~~~--~~~~~~l~~~~ea~~~~~~~~~~g-kvvi~~~~~~~  339 (344)
                      +.++++++++++|++++.  +++.|+++++++||+.+.+++..| |+|+++++++.
T Consensus       310 ~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~~  365 (371)
T 3gqv_A          310 DLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPLE  365 (371)
T ss_dssp             HHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC--
T ss_pred             HHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCccc
Confidence            667799999999999974  556699999999999999998877 67777766544

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3.8e-52  Score=376.05  Aligned_cols=303  Identities=20%  Similarity=0.255  Sum_probs=263.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecc--cCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKT--EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   78 (344)
                      |||+++++++..           +.+++  +|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|+++|||++|+
T Consensus         7 mka~~~~~~~~~-----------l~~~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~   73 (360)
T 1piw_A            7 FEGIAIQSHEDW-----------KNPKKTKYDPKP-FYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGK   73 (360)
T ss_dssp             EEEEEECCSSST-----------TSCEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEE
T ss_pred             eEEEEEecCCCC-----------eeEEeccccCCC-CCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEE
Confidence            899999988742           23467  89999 59999999999999999999999886542 45799999999999


Q ss_pred             EEEeCCCCC-CCCCCCEEEE-----------------------------------ecCCCceeeEEeecc---cCCCCCC
Q 019196           79 VDAVGPNVS-NFKVGDTVCG-----------------------------------FAALGSFAQFIVADQ---FPVPKGC  119 (344)
Q Consensus        79 V~~~g~~~~-~~~~Gd~V~~-----------------------------------~~~~g~~~~~~~~~~---~~~P~~~  119 (344)
                      |+++|++++ +|++||||+.                                   ...+|+|+||+++++   +++|+++
T Consensus        74 V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~  153 (360)
T 1piw_A           74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI  153 (360)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTS
T ss_pred             EEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCC
Confidence            999999999 9999999932                                   123599999999998   9999999


Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS  199 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~  199 (344)
                      ++++||++++++.|||+++.. ++++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|++.+++++
T Consensus       154 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~  231 (360)
T 1piw_A          154 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL  231 (360)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCc
Confidence            999999999999999999955 89999999999999 9999999999999999999999999999999999999999987


Q ss_pred             CC-CchhhHHHHHHHhcCCCccEEEeCCCh---hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          200 NE-SVIPSVKEFLKARKLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       200 ~~-~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      +. ++   .+.+    . .++|++|||+|.   ..++.++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus       232 ~~~~~---~~~~----~-~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~  302 (360)
T 1piw_A          232 EEGDW---GEKY----F-DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALG  302 (360)
T ss_dssp             GTSCH---HHHS----C-SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCC
T ss_pred             CchHH---HHHh----h-cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecC
Confidence            65 44   2222    1 489999999997   678889999999999999997665 3245556678899999987654


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhh--HHHHHHHHHcCCcceeEEEEecCC
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE--ANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~--~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                      .         .+.++++++++++|++++.+ ++|++++  +++||+.+.+++..||+|++++++
T Consensus       303 ~---------~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~  356 (360)
T 1piw_A          303 S---------IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK  356 (360)
T ss_dssp             C---------HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred             C---------HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence            3         46789999999999999887 9999999  999999999988889999998653

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-51  Score=371.09  Aligned_cols=307  Identities=22%  Similarity=0.330  Sum_probs=261.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHH-HHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYL-QILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||+++.+++++           +.++++|.|+ |+++||+|||.+++||++|++ .+.|.++  ..+|+++|||++|+|
T Consensus         9 mka~~~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V   74 (374)
T 1cdo_A            9 CKAAVAWEANKP-----------LVIEEIEVDV-PHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIV   74 (374)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEE
T ss_pred             eEEEEEecCCCC-----------eEEEEeeCCC-CCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEE
Confidence            899999988753           3457899999 699999999999999999999 8888654  467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeec
Q 019196           80 DAVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVAD  111 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~  111 (344)
                      +++|+++++|++||||++..                                                ..|+|+||++++
T Consensus        75 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~  154 (374)
T 1cdo_A           75 ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN  154 (374)
T ss_dssp             EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEE
T ss_pred             EEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEc
Confidence            99999999999999998642                                                138999999999


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      +   +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++
T Consensus       155 ~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          155 QIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             hhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            8   9999999999999999999999999988899999999999997 9999999999999999 899999999999999


Q ss_pred             HhcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCCCcchhhhh
Q 019196          188 KSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIAL  263 (344)
Q Consensus       188 ~~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  263 (344)
                      +++|+++++++++  .++   .+.+.+.+.+ ++|++|||+|. +.+..++++++++ |+++.+|........++...++
T Consensus       234 ~~lGa~~vi~~~~~~~~~---~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~  309 (374)
T 1cdo_A          234 KVFGATDFVNPNDHSEPI---SQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLI  309 (374)
T ss_dssp             HHTTCCEEECGGGCSSCH---HHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHH
T ss_pred             HHhCCceEEeccccchhH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHh
Confidence            9999999998764  344   4445555655 89999999997 6788999999999 9999999765422224444556


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++ ++.|+..+.+.      ..+.++++++++++|+++  +.++++|+|+++++||+.+.+++. +|+|++|
T Consensus       310 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          310 AGR-TWKGSMFGGFK------GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCC-eEEEEecCCCC------cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            677 88887643321      146789999999999998  468899999999999999988875 6999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.6e-52  Score=386.40  Aligned_cols=328  Identities=23%  Similarity=0.296  Sum_probs=272.5

Q ss_pred             CceEEecccCCCCcc----ccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhc-------------CC-
Q 019196            1 MEALVCRKLGDPTVS----IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-------------YQ-   62 (344)
Q Consensus         1 m~a~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~-------------~~-   62 (344)
                      |||+++.+++.....    ...++..-+.++++|.|+ |+++||+|||.+++||++|++...+.             .. 
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~-~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~  109 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPE-LGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSD  109 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCH
T ss_pred             eEEEEEeccccccccccccccCCCCCCcEEEEccCCC-CCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcccccc
Confidence            899999876210000    000001125568999999 69999999999999999998764321             11 


Q ss_pred             --CCCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc
Q 019196           63 --EKPPLP-FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        63 --~~~~~p-~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~  112 (344)
                        ....+| .++|||++|+|+++|+++++|++||+|++.+                           .+|+|+||++++.
T Consensus       110 ~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~  189 (456)
T 3krt_A          110 LAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKS  189 (456)
T ss_dssp             HHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEG
T ss_pred             ccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEech
Confidence              123467 6899999999999999999999999998743                           1499999999999


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHh--cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                         +++|+++++++||+++.+++|||+++...  ++++++++|||+|++|++|++++|+|+..|++|++++++++|++++
T Consensus       190 ~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          190 NQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             GGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             HHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence               99999999999999999999999998654  7899999999999999999999999999999999999999999999


Q ss_pred             HhcCCcEEEeCCCCCch--------------hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCC
Q 019196          188 KSLGVDHVVDLSNESVI--------------PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~--------------~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      +++|++.++++.+.++.              ...+.+.+.+.+.++|++|||+|.+.+..++++++++|+++.+|...+.
T Consensus       270 ~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~  349 (456)
T 3krt_A          270 RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGY  349 (456)
T ss_dssp             HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTCS
T ss_pred             HhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCCc
Confidence            99999999998876541              1135666777788999999999999999999999999999999987655


Q ss_pred             CCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEE
Q 019196          254 IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA  333 (344)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~  333 (344)
                      ...++...++.+++++.|+.....         +.+.++++++++|++++.++++|+|+++++|++.+.+++..||+|+.
T Consensus       350 ~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~  420 (456)
T 3krt_A          350 MHEYDNRYLWMSLKRIIGSHFANY---------REAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVL  420 (456)
T ss_dssp             EEEEEHHHHHHTTCEEEECCSCCH---------HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEE
T ss_pred             ccccCHHHHHhcCeEEEEeccCCH---------HHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEEEE
Confidence            444666677888999998876552         45667899999999999999999999999999999999999999999


Q ss_pred             ecCCC
Q 019196          334 FDDMK  338 (344)
Q Consensus       334 ~~~~~  338 (344)
                      +.+++
T Consensus       421 ~~~~~  425 (456)
T 3krt_A          421 CLAPE  425 (456)
T ss_dssp             SSCSS
T ss_pred             eCCCC
Confidence            86544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.5e-51  Score=372.60  Aligned_cols=305  Identities=20%  Similarity=0.309  Sum_probs=259.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus        10 mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~   75 (373)
T 1p0f_A           10 CKAAVAWEPHKP-----------LSLETITVAP-PKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVE   75 (373)
T ss_dssp             EEEEEBSSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEE
T ss_pred             eEEEEEEcCCCC-----------eeEEEeeCCC-CCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEE
Confidence            899999988753           4457899999 6999999999999999999999988764  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||||++..                                                ..|+|+||+++++
T Consensus        76 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  155 (373)
T 1p0f_A           76 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  155 (373)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             EECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence            9999999999999998642                                                1389999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|++++++ ||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       156 ~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          156 IAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             TSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             hhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence               9999999999 99999999999999988899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCC-CCCcchhhhh
Q 019196          189 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  263 (344)
Q Consensus       189 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  263 (344)
                      ++|+++++++++  .++   .+.+.+.+.+ ++|++|||+|. +.+..++++++++ |+++.+|..... ...++...++
T Consensus       234 ~lGa~~vi~~~~~~~~~---~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  309 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPI---YEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL  309 (373)
T ss_dssp             HTTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH
T ss_pred             HcCCcEEEecccccchH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhc
Confidence            999999998764  344   4555566665 89999999997 6789999999999 999999976532 1223444455


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++ ++.|+..+.+   .+    +.++++++++++|+++  +.++++|+|+++++||+.+.+++. +|+|+++
T Consensus       310 ~~~-~i~g~~~~~~---~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          310 TGR-SLKGSVFGGF---KG----EEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             TTC-EEEECSGGGC---CG----GGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             cCc-eEEeeccCCc---CH----HHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            677 8888764332   11    4678899999999998  468899999999999999988775 6999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4e-51  Score=371.62  Aligned_cols=306  Identities=25%  Similarity=0.378  Sum_probs=260.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++..           +.++++|.|+ |+++||+|||.+++||++|++.+.|. + ...+|+++|||++|+|+
T Consensus         9 mka~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~-~-~~~~P~v~GhE~~G~V~   74 (376)
T 1e3i_A            9 CKAAIAWKTGSP-----------LCIEEIEVSP-PKACEVRIQVIATCVCPTDINATDPK-K-KALFPVVLGHECAGIVE   74 (376)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHTTCTT-S-CCCSSBCCCCEEEEEEE
T ss_pred             eeEEEEecCCCC-----------eEEEEeeCCC-CCCCeEEEEEeEEeEchhhHHHhcCC-C-CCCCCcccCccccEEEE
Confidence            899999988753           3457889998 69999999999999999999988875 2 24679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------------------------------CCCceeeEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------------------------------ALGSFAQFI  108 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------------------------------~~g~~~~~~  108 (344)
                      ++|+++++|++||||++..                                                    ..|+|+||+
T Consensus        75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~  154 (376)
T 1e3i_A           75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT  154 (376)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             EECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEE
Confidence            9999999999999998641                                                    138999999


Q ss_pred             eecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHH
Q 019196          109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI  184 (344)
Q Consensus       109 ~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~  184 (344)
                      ++++   +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++
T Consensus       155 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (376)
T 1e3i_A          155 VVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF  233 (376)
T ss_dssp             EEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             EeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            9998   9999999999999999999999999988899999999999997 9999999999999999 899999999999


Q ss_pred             HHHHhcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCCCcchh
Q 019196          185 KFLKSLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPAN  260 (344)
Q Consensus       185 ~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~  260 (344)
                      ++++++|+++++++++  .++   .+.+.+.+.+ ++|++|||+|. +.++.++++++++ |+++.+|..... ..++..
T Consensus       234 ~~a~~lGa~~vi~~~~~~~~~---~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~-~~~~~~  308 (376)
T 1e3i_A          234 PKAKALGATDCLNPRELDKPV---QDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE-MTIPTV  308 (376)
T ss_dssp             HHHHHTTCSEEECGGGCSSCH---HHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE-EEEEHH
T ss_pred             HHHHHhCCcEEEccccccchH---HHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCc-cccCHH
Confidence            9999999999998764  344   4455556665 89999999997 6789999999999 999999974322 234445


Q ss_pred             hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          261 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++.++ ++.|+..+.+.      ..+.++++++++++|+++  +.++++|+|+++++||+.+.+++ .+|+|+++
T Consensus       309 ~~~~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          309 DVILGR-SINGTFFGGWK------SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HHHTTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             HhhccC-eEEEEecCCCC------cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            566777 88887643321      146789999999999998  46889999999999999998877 46999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=5.3e-52  Score=372.82  Aligned_cols=305  Identities=23%  Similarity=0.314  Sum_probs=263.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (344)
                      |||++++++|++           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++.  ...+|+++|||++|+
T Consensus         1 Mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   68 (343)
T 2dq4_A            1 MRALAKLAPEEG-----------LTLVDRPVPE-PGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGV   68 (343)
T ss_dssp             CEEEEECSSSSS-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEE
T ss_pred             CeEEEEeCCCCc-----------EEEEeccCCC-CCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEE
Confidence            999999998863           3347899999 69999999999999999999999885431  235789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe---------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           79 VDAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                      |+++|+++++|++||||++.                           ..+|+|+||+++++   +++|+++++++||++ 
T Consensus        69 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  147 (343)
T 2dq4_A           69 VEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-  147 (343)
T ss_dssp             EEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-
T ss_pred             EEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-
Confidence            99999999999999999874                           24599999999998   999999999999977 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      .+++|||+++.+.+++ ++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++ ++.++++++.++   .
T Consensus       148 ~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~---~  221 (343)
T 2dq4_A          148 EPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDL---L  221 (343)
T ss_dssp             HHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCH---H
T ss_pred             hHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCH---H
Confidence            6888999999657889 9999999999 9999999999999999 999999999999999999 999999887776   4


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcch-hhhhccceEEEEEEeccccccCchhH
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      +.+.+.+ +.++|++|||+|. +.++.++++++++|+++.+|..... ..++. ..++.+++++.|+....    .    
T Consensus       222 ~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~----~----  291 (343)
T 2dq4_A          222 EVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDP-IRFDLAGELVMRGITAFGIAGRR----L----  291 (343)
T ss_dssp             HHHHHHH-SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-EEECHHHHTGGGTCEEEECCSCC----T----
T ss_pred             HHHHHhc-CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ceeCcHHHHHhCceEEEEeecCC----C----
Confidence            5555556 6789999999998 6789999999999999999976533 23555 56788999999875431    1    


Q ss_pred             HHHHHHHHHHHHCCce--eEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          286 EDSLRELLLWAAKGLI--TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i--~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      .+.++++++++++|++  ++.++++|+++++++||+.+.+++. ||+|++++
T Consensus       292 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            3678899999999995  4678899999999999999998877 99999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-51  Score=375.44  Aligned_cols=305  Identities=22%  Similarity=0.321  Sum_probs=264.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|+.           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++ ...+|+++|||++|+|+
T Consensus        18 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~G~V~   84 (380)
T 1vj0_A           18 AHAMVLEKFNQP-----------LVYKEFEISD-IPRGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGRVV   84 (380)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCC-----------eEEEEccCCC-CCCCEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcEEEEE
Confidence            899999998821           4457899998 6999999999999999999999998654 24679999999999999


Q ss_pred             EeCCCCC------CCCCCCEEEEe------------------------------------cCCCceeeEEee-cc---cC
Q 019196           81 AVGPNVS------NFKVGDTVCGF------------------------------------AALGSFAQFIVA-DQ---FP  114 (344)
Q Consensus        81 ~~g~~~~------~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~-~~---~~  114 (344)
                      ++| +++      +|++||||++.                                    ..+|+|+||+++ ++   ++
T Consensus        85 ~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~  163 (380)
T 1vj0_A           85 EVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK  163 (380)
T ss_dssp             EES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred             EeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence            999 998      89999999873                                    125999999999 87   99


Q ss_pred             CCCCCCHH-HHhhccchHHHHHHHHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcC
Q 019196          115 VPKGCDLL-AAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG  191 (344)
Q Consensus       115 ~P~~~~~~-~aa~l~~~~~ta~~~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g  191 (344)
                      +|++++++ +|+.++ +++|||+++ ..++ ++++++|||+| +|++|++++|+|+.+| ++|++++++++++++++++|
T Consensus       164 iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG  240 (380)
T 1vj0_A          164 VSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG  240 (380)
T ss_dssp             ECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT
T ss_pred             CCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC
Confidence            99999999 676665 999999999 5688 99999999999 5999999999999999 59999999999999999999


Q ss_pred             CcEEEeCC---CCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC-CCCCCcchhh-hhcc
Q 019196          192 VDHVVDLS---NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS-GEIPVIPANI-ALVK  265 (344)
Q Consensus       192 ~~~v~~~~---~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-~~~~  265 (344)
                      ++.+++++   +.++   .+.+.+.+.+.++|++|||+|. ..+..++++++++|+++.+|... +....++... ++.+
T Consensus       241 a~~vi~~~~~~~~~~---~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  317 (380)
T 1vj0_A          241 ADLTLNRRETSVEER---RKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLK  317 (380)
T ss_dssp             CSEEEETTTSCHHHH---HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTT
T ss_pred             CcEEEeccccCcchH---HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhC
Confidence            99999887   4333   4556667777789999999997 57899999999999999999876 4223355556 7889


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHC--CceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK--GLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      ++++.|+....         .+.++++++++++  |++++.++++|+|+++++||+.+.+++.. |+|++++
T Consensus       318 ~~~i~g~~~~~---------~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          318 NATFKGIWVSD---------TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             TCEEEECCCCC---------HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             CeEEEEeecCC---------HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            99999976543         4778999999999  99988899999999999999999988888 9999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.6e-51  Score=370.47  Aligned_cols=306  Identities=24%  Similarity=0.334  Sum_probs=263.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHh-cCC-CCCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILG-KYQ-EKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~   78 (344)
                      |||++++++|+.           +.++++|.|+ |+++||+|||.+++||++|++.+.| .++ ....+|.++|||++|+
T Consensus         5 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   72 (348)
T 2d8a_A            5 MVAIMKTKPGYG-----------AELVEVDVPK-PGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGE   72 (348)
T ss_dssp             EEEEEECSSSSS-----------CEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEE
T ss_pred             ceEEEEECCCCC-----------EEEEECCCCC-CCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEE
Confidence            899999998831           4457899999 6999999999999999999999988 432 1135789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                      |+++|+++++|++||||++..                           .+|+|+||+++++   +++|+++++++||++ 
T Consensus        73 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-  151 (348)
T 2d8a_A           73 VVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-  151 (348)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-
T ss_pred             EEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-
Confidence            999999999999999998752                           3599999999998   999999999999977 


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      .+++|||+++ +.+++ ++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++++.++   .
T Consensus       152 ~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~  225 (348)
T 2d8a_A          152 EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDV---V  225 (348)
T ss_dssp             HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCH---H
T ss_pred             hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCH---H
Confidence            4889999999 77889 9999999999 9999999999999999 9999999999999999999999999887776   5


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcch-hhhhccceEEEEEEeccccccCchhH
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPA-NIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      +.+.+.+.+.++|++|||+|. +.++.++++++++|+++.+|..... ..++. ..++.+++++.|+.....        
T Consensus       226 ~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~--------  296 (348)
T 2d8a_A          226 KEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK-VTIDFNNLIIFKALTIYGITGRHL--------  296 (348)
T ss_dssp             HHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHTTTTTCEEEECCCCCS--------
T ss_pred             HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-cccCchHHHHhCCcEEEEecCCCc--------
Confidence            566667777789999999997 6788999999999999999976543 33555 667889999998754321        


Q ss_pred             HHHHHHHHHHHHCCcee--Eeeeeeec-hhhHHHHHHHHHcCCcceeEEEEec
Q 019196          286 EDSLRELLLWAAKGLIT--IHISHTYS-PSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i~--~~~~~~~~-l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      .+.++++++++++|+++  +.++++|+ ++++++||+.+.+ ...||+|++++
T Consensus       297 ~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             HHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            36789999999999964  56889999 9999999999977 56789999864

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=8.3e-51  Score=369.24  Aligned_cols=307  Identities=21%  Similarity=0.338  Sum_probs=261.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.+           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++.  .+|+++|||++|+|+
T Consensus         9 mkA~~~~~~g~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~   74 (374)
T 2jhf_A            9 CKAAVLWEEKKP-----------FSIEEVEVAP-PKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVE   74 (374)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEE
T ss_pred             EEEEEEecCCCc-----------eEEEEccCCC-CCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEE
Confidence            899999988753           3457889998 69999999999999999999999987643  379999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||||++..                                                ..|+|+||+++++
T Consensus        75 ~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  154 (374)
T 2jhf_A           75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE  154 (374)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEch
Confidence            9999999999999998642                                                1389999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       155 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          155 ISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             HHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence               9999999999999999999999999988899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCC-CCCcchhhhh
Q 019196          189 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  263 (344)
Q Consensus       189 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  263 (344)
                      ++|+++++++++  .++   .+.+.+.+.+ ++|++|||+|. +.+..++++++++ |+++.+|..... ...++...++
T Consensus       234 ~lGa~~vi~~~~~~~~~---~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  309 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPI---QEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL  309 (374)
T ss_dssp             HTTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred             HhCCceEecccccchhH---HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHh
Confidence            999999998764  344   4445555655 89999999997 6788999999999 999999976532 2224444556


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE--eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~--~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++ ++.|+..+.+.      ..+.++++++++++|++++  .++++|+|+++++||+.+.+++. +|+|+.+
T Consensus       310 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          310 SGR-TWKGAIFGGFK------SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCC-eEEEeccCCCC------hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            677 88887644321      1467899999999999984  68899999999999999988775 6999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.1e-51  Score=369.47  Aligned_cols=309  Identities=20%  Similarity=0.296  Sum_probs=261.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC-CC-CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QE-KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~   78 (344)
                      |||+++++++.            +.++++|.|+ |+++||+|||.+++||++|++.+.|.. .. ...+|+++|||++|+
T Consensus         8 mka~~~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   74 (356)
T 1pl8_A            8 NLSLVVHGPGD------------LRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (356)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             ceEEEEecCCc------------EEEEEccCCC-CCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEE
Confidence            89999988664            4457899998 699999999999999999999988532 11 135689999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhc
Q 019196           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAAL  127 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l  127 (344)
                      |+++|+++++|++||||++.                            ..+|+|+||+++++   +++|+++++++||.+
T Consensus        75 V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~  154 (356)
T 1pl8_A           75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI  154 (356)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh
Confidence            99999999999999999864                            13699999999998   999999999999865


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                       .+++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++++++++..+..+.
T Consensus       155 -~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  231 (356)
T 1pl8_A          155 -EPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI  231 (356)
T ss_dssp             -HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             -chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchH
Confidence             6899999999 7889999999999997 9999999999999999 8999999999999999999999998873111122


Q ss_pred             HHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhH
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL  285 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (344)
                      .+++.+.+. .++|++|||+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.|+...          
T Consensus       232 ~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~----------  299 (356)
T 1pl8_A          232 ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEM-TTVPLLHAAIREVDIKGVFRY----------  299 (356)
T ss_dssp             HHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSC-CCCCHHHHHHTTCEEEECCSC----------
T ss_pred             HHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCC-CccCHHHHHhcceEEEEeccc----------
Confidence            455566665 7899999999975 678999999999999999975432 335566778899999986532          


Q ss_pred             HHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEecCCC
Q 019196          286 EDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK  338 (344)
Q Consensus       286 ~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~~  338 (344)
                      .+.++++++++++|+++  +.++++|+++++++||+.+.++ ..||+|+++++++
T Consensus       300 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~~  353 (356)
T 1pl8_A          300 CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPSD  353 (356)
T ss_dssp             SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTTC
T ss_pred             HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCCC
Confidence            13478899999999976  5688999999999999999988 7899999997654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-50  Score=365.60  Aligned_cols=306  Identities=22%  Similarity=0.288  Sum_probs=262.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhc-CCC-CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-YQE-KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~   78 (344)
                      |||+++++++.            +.++++|.|+ |+++||+|||.+++||++|++.+.+. +.. ...+|+++|||++|+
T Consensus         5 mka~~~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~   71 (352)
T 1e3j_A            5 NLSAVLYKQND------------LRLEQRPIPE-PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGT   71 (352)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CEEEEEEcCCc------------EEEEEecCCC-CCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEE
Confidence            89999988664            4457899998 69999999999999999999988853 321 235799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEec----------------------------CCCceeeEEeecc---cCCCCCCCHHHHhhc
Q 019196           79 VDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQ---FPVPKGCDLLAAAAL  127 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l  127 (344)
                      |+++|+++++|++||||++..                            .+|+|+||+++++   +++|+++++++||++
T Consensus        72 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  151 (352)
T 1e3j_A           72 VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL  151 (352)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH
T ss_pred             EEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh
Confidence            999999999999999998641                            3599999999998   999999999999865


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhh
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPS  206 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~  206 (344)
                       .+++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|++.++++++ .++   
T Consensus       152 -~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~---  225 (352)
T 1e3j_A          152 -EPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEE---  225 (352)
T ss_dssp             -HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSC---
T ss_pred             -chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccH---
Confidence             6899999999 7889999999999998 99999999999999999999999999999999999999999885 666   


Q ss_pred             HHHHHHHhc---CCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCc
Q 019196          207 VKEFLKARK---LKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP  282 (344)
Q Consensus       207 ~~~~~~~~~---~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (344)
                      .+++.+.+.   +.++|++|||+|.+ .++.++++++++|+++.+|..... ..++...++.+++++.++...       
T Consensus       226 ~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~-------  297 (352)
T 1e3j_A          226 ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAREIDIKSVFRY-------  297 (352)
T ss_dssp             HHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTTTCEEEECCSC-------
T ss_pred             HHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ccccHHHHHhcCcEEEEeccc-------
Confidence            455555554   57899999999975 678999999999999999975433 235556778899999986532       


Q ss_pred             hhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCC-cceeEEEEecC
Q 019196          283 HVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRK-VIGKVMIAFDD  336 (344)
Q Consensus       283 ~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~-~~gkvvi~~~~  336 (344)
                         .+.++++++++++|+++  +.++++|+++++++||+.+.+++ ..||+|+++++
T Consensus       298 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          298 ---CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             ---SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             ---hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence               13478899999999975  56889999999999999999887 68999998864

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=9.1e-52  Score=384.01  Aligned_cols=328  Identities=24%  Similarity=0.317  Sum_probs=270.7

Q ss_pred             CceEEecccCCCC--ccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHH----------------hcCC
Q 019196            1 MEALVCRKLGDPT--VSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL----------------GKYQ   62 (344)
Q Consensus         1 m~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~----------------g~~~   62 (344)
                      |||+++..++.-.  .....++..-+.++++|.|+ |+++||+|||.+++||++|++...                |.+.
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~-~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~  103 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPE-LAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA  103 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG
T ss_pred             heeeeeeccccccccccccCCCCCCceEEeccCCC-CCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc
Confidence            8999999887100  00000111125668999999 699999999999999999985421                2222


Q ss_pred             CCCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeecc--
Q 019196           63 EKPPLP-FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQ--  112 (344)
Q Consensus        63 ~~~~~p-~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~--  112 (344)
                      ....+| .++|||++|+|+++|+++++|++||||++..                           ..|+|+||+++++  
T Consensus       104 ~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~  183 (447)
T 4a0s_A          104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQ  183 (447)
T ss_dssp             GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGG
T ss_pred             cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHH
Confidence            223466 6999999999999999999999999998753                           1499999999999  


Q ss_pred             -cCCCCCCCHHHHhhccchHHHHHHHHHH--hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh
Q 019196          113 -FPVPKGCDLLAAAALPVAFGTSHVALVH--RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  189 (344)
Q Consensus       113 -~~~P~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  189 (344)
                       +++|+++++++||+++.+++|||+++..  .++++++++|||+|++|++|++++|+|+..|++|+++++++++++++++
T Consensus       184 ~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~  263 (447)
T 4a0s_A          184 LLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA  263 (447)
T ss_dssp             EEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             cEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence             9999999999999999999999999864  3889999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEeCCCCCch---------------hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCC
Q 019196          190 LGVDHVVDLSNESVI---------------PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI  254 (344)
Q Consensus       190 ~g~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~  254 (344)
                      +|++.++++.+.++.               ...+.+.+.+ +.++|++|||+|.+.+..++.+++++|+++.+|...+..
T Consensus       264 lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~  342 (447)
T 4a0s_A          264 LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYL  342 (447)
T ss_dssp             TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCSE
T ss_pred             cCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCcc
Confidence            999999886544320               1134555566 778999999999988899999999999999999776544


Q ss_pred             CCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          255 PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      ..++...++.+++++.|+....         .+.+.++++++++|++++.++++|+++++++||+.+.+++..||+|+.+
T Consensus       343 ~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          343 HTFDNRYLWMKLKKIVGSHGAN---------HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             EEEEHHHHHHTTCEEEECCSCC---------HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             cccCHHHHHhCCCEEEecCCCC---------HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEe
Confidence            4456667788999999877554         2567789999999999999999999999999999999999999999999


Q ss_pred             cCCCC
Q 019196          335 DDMKS  339 (344)
Q Consensus       335 ~~~~~  339 (344)
                      .+++.
T Consensus       414 ~~~~~  418 (447)
T 4a0s_A          414 MAPEQ  418 (447)
T ss_dssp             SCCST
T ss_pred             CCCCC
Confidence            66554

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=4.2e-52  Score=376.56  Aligned_cols=304  Identities=23%  Similarity=0.327  Sum_probs=263.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.            +.++++|.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus        24 mkA~v~~~~~~------------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~p~v~G~e~~G~V~   88 (370)
T 4ej6_A           24 MKAVRLESVGN------------ISVRNVGIPE-PGPDDLLVKVEACGICGTDRHLLHGEFP--STPPVTLGHEFCGIVV   88 (370)
T ss_dssp             EEEEEEEETTE------------EEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSEECCCSEEEEEE
T ss_pred             eEEEEEecCCc------------eEEEEccCCC-CCCCeEEEEEEEEeecHHHHHHHcCCCC--CCCCeecCcceEEEEE
Confidence            89999998875            4558899999 6999999999999999999999998763  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe---------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccch
Q 019196           81 AVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVA  130 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~  130 (344)
                      ++|+++++|++||||++.                           ..+|+|+||++++.   +++|+++++++|| ++.+
T Consensus        89 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~  167 (370)
T 4ej6_A           89 EAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEP  167 (370)
T ss_dssp             EECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHH
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhH
Confidence            999999999999999862                           34699999999999   9999999999998 7789


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019196          131 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       131 ~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  209 (344)
                      ++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++.++++++.++   .+.
T Consensus       168 ~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~---~~~  242 (370)
T 4ej6_A          168 LACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDV---VEA  242 (370)
T ss_dssp             HHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCH---HHH
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCH---HHH
Confidence            99999999 7899999999999998 9999999999999999 8999999999999999999999999988776   444


Q ss_pred             HHH---HhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEeccccccCchh
Q 019196          210 FLK---ARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRPHV  284 (344)
Q Consensus       210 ~~~---~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (344)
                      +.+   .+.+ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.+++++.|+....        
T Consensus       243 i~~~~~~~~g-g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--------  313 (370)
T 4ej6_A          243 IAGPVGLVPG-GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP--------  313 (370)
T ss_dssp             HHSTTSSSTT-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT--------
T ss_pred             HHhhhhccCC-CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh--------
Confidence            444   4555 89999999995 6789999999999999999977653 33466677889999999976533        


Q ss_pred             HHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCC-cceeEEEEecC
Q 019196          285 LEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRK-VIGKVMIAFDD  336 (344)
Q Consensus       285 ~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~-~~gkvvi~~~~  336 (344)
                        ..++++++++++|+++  +.++++|+|+++++||+.+.+++ ..+|+++++++
T Consensus       314 --~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          314 --FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             --TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             --HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence              3378899999999996  46889999999999999998876 45688877653

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=7.8e-51  Score=369.44  Aligned_cols=308  Identities=24%  Similarity=0.339  Sum_probs=261.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|+++|||++|+|+
T Consensus         7 mkA~~~~~~~~~-----------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   73 (373)
T 2fzw_A            7 CKAAVAWEAGKP-----------LSIEEIEVAP-PKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVE   73 (373)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEE
T ss_pred             eEEEEEecCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEE
Confidence            899999988753           3457889998 69999999999999999999999987642 4579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++++|++||||++..                                                ..|+|+||+++++
T Consensus        74 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  153 (373)
T 2fzw_A           74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (373)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             EECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEch
Confidence            9999999999999998642                                                1489999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK  188 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~  188 (344)
                         +++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus       154 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          154 ISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             GGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             hheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence               9999999999999999999999999988899999999999997 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEEeCCC--CCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCC-CCCcchhhhh
Q 019196          189 SLGVDHVVDLSN--ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGE-IPVIPANIAL  263 (344)
Q Consensus       189 ~~g~~~v~~~~~--~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  263 (344)
                      ++|++.++++++  .++   .+.+.+.+.+ ++|++|||+|. +.+..++++++++ |+++.+|..... ...++...++
T Consensus       233 ~lGa~~vi~~~~~~~~~---~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  308 (373)
T 2fzw_A          233 EFGATECINPQDFSKPI---QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV  308 (373)
T ss_dssp             HHTCSEEECGGGCSSCH---HHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH
T ss_pred             HcCCceEeccccccccH---HHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHh
Confidence            999999998764  344   4455555655 89999999997 6788999999999 999999976532 1223444556


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .++ ++.|+..+.+.      ..+.++++++++++|+++  +.++++|+|+++++||+.+.+++. +|+|+++
T Consensus       309 ~~~-~i~g~~~~~~~------~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          309 TGR-TWKGTAFGGWK------SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             TTC-EEEECSGGGCC------HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             cCC-EEEEeccCCCC------cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            677 88887644321      146789999999999998  468899999999999999988775 6999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-51  Score=370.87  Aligned_cols=303  Identities=22%  Similarity=0.283  Sum_probs=257.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++.           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+
T Consensus        23 ~~a~~~~~~~~~-----------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   89 (369)
T 1uuf_A           23 IKAVGAYSAKQP-----------LEPMDITRRE-PGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVV   89 (369)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEcCCCCC-----------cEEEEecCCC-CCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEE
Confidence            778877665433           5567899999 69999999999999999999999886542 3579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------------cCCCceeeEEeecc---cCCCCC-CC
Q 019196           81 AVGPNVSNFKVGDTVCGF------------------------------------AALGSFAQFIVADQ---FPVPKG-CD  120 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~~---~~~P~~-~~  120 (344)
                      ++|+++++|++||||++.                                    ..+|+|+||++++.   +++|++ ++
T Consensus        90 ~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls  169 (369)
T 1uuf_A           90 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQ  169 (369)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGG
T ss_pred             EECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCC
Confidence            999999999999999742                                    23599999999998   999999 99


Q ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC
Q 019196          121 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN  200 (344)
Q Consensus       121 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~  200 (344)
                      +++||++++++.|||+++.. .+++++++|||+|+ |++|++++|+|+.+|++|++++++++++++++++|++.++++.+
T Consensus       170 ~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  247 (369)
T 1uuf_A          170 LAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN  247 (369)
T ss_dssp             HHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             HHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEecccc
Confidence            99999999999999999954 68999999999998 99999999999999999999999999999999999999998875


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  279 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (344)
                      .++   .+++   .  .++|++|||+|.+ .++.++++++++|+++.+|...+....++...++.+++++.|+....   
T Consensus       248 ~~~---~~~~---~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---  316 (369)
T 1uuf_A          248 ADE---MAAH---L--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---  316 (369)
T ss_dssp             HHH---HHTT---T--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC---
T ss_pred             HHH---HHHh---h--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCC---
Confidence            432   2221   1  5899999999975 78899999999999999997654432355566788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          280 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       280 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                            .+.++++++++++|++++.+ ++|+++++++||+.+.+++..||+|+++++
T Consensus       317 ------~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          317 ------IPETQEMLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             ------HHHHHHHHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             ------HHHHHHHHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence                  36788999999999999776 479999999999999998888999999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.2e-50  Score=366.06  Aligned_cols=315  Identities=28%  Similarity=0.391  Sum_probs=266.7

Q ss_pred             CceEEecccCCCCccccCCCCceeee-cccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |||++++++|..-       ...+.+ +++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|
T Consensus        24 MkA~~~~~~g~~~-------~~~l~~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V   95 (362)
T 2c0c_A           24 MQKLVVTRLSPNF-------REAVTLSRDCPVPL-PGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEV   95 (362)
T ss_dssp             EEEEEECSCCSSH-------HHHEEEEEEEECCC-CCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEE
T ss_pred             ceEEEEeecCCCc-------cceeEEEeecCCCC-CCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEE
Confidence            8999999987520       011556 7899999 699999999999999999999999876544567999999999999


Q ss_pred             EEeCCCCC-CCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196           80 DAVGPNVS-NFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus        80 ~~~g~~~~-~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                      +++|++++ +|++||||++... |+|+||+++++   +++|+. + .++|+++.+++|||+++.+.++++++++|||+|+
T Consensus        96 ~~vG~~V~~~~~vGdrV~~~~~-G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga  172 (362)
T 2c0c_A           96 VALGLSASARYTVGQAVAYMAP-GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAA  172 (362)
T ss_dssp             EEECTTGGGTCCTTCEEEEECS-CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTT
T ss_pred             EEECCCccCCCCCCCEEEEccC-CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCC
Confidence            99999999 9999999998764 99999999998   899996 4 4667788999999999988889999999999998


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHH
Q 019196          156 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL  235 (344)
Q Consensus       156 ~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (344)
                      +|++|++++|+|+..|++|+++++++++++.++++|++.++++++.++   .+.+.+.+ +.++|++|||+|...++.++
T Consensus       173 ~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~---~~~~~~~~-~~g~D~vid~~g~~~~~~~~  248 (362)
T 2c0c_A          173 AGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPV---GTVLKQEY-PEGVDVVYESVGGAMFDLAV  248 (362)
T ss_dssp             TBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHC-TTCEEEEEECSCTHHHHHHH
T ss_pred             CcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhH---HHHHHHhc-CCCCCEEEECCCHHHHHHHH
Confidence            899999999999999999999999999999999999999999887665   33444444 56899999999998889999


Q ss_pred             hcccCCCEEEEEeccCCCCC----------CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEee
Q 019196          236 KLLNWGAQILVIGFASGEIP----------VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHI  305 (344)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~  305 (344)
                      ++++++|+++.+|...+...          .+ ...++.+++++.|++...+.    ....+.++++++++++|++++.+
T Consensus       249 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~~  323 (362)
T 2c0c_A          249 DALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYL----SKYQAAMSHLLEMCVSGDLVCEV  323 (362)
T ss_dssp             HHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCG----GGHHHHHHHHHHHHHTTCSCCCE
T ss_pred             HHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhh----hhHHHHHHHHHHHHHCCCeEeee
Confidence            99999999999997653210          11 24567899999987654432    22357899999999999999754


Q ss_pred             e--------eeechhhHHHHHHHHHcCCcceeEEEEec
Q 019196          306 S--------HTYSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       306 ~--------~~~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      .        ..|+++++++||+.+.+++..||+|++++
T Consensus       324 ~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             ECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             ccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence            3        66899999999999999888899999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.1e-51  Score=369.12  Aligned_cols=301  Identities=25%  Similarity=0.355  Sum_probs=242.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-CCCCCcccCcceeEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-KPPLPFVPGSDYSGTV   79 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V   79 (344)
                      |||++++++|..           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|
T Consensus         4 mka~~~~~~g~~-----------l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V   71 (344)
T 2h6e_A            4 SKAALLKKFSEP-----------LSIEDVNIPE-PQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTI   71 (344)
T ss_dssp             EEBCEECSCCC----------------EEEECC-CCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEE
T ss_pred             eEEEEEecCCCC-----------CeEEEeeCCC-CCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEE
Confidence            899999988742           3457889999 69999999999999999999999987642 2367999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEec---------------------------CCCceeeEEeec-c---cCCCCCCCHHHHhhcc
Q 019196           80 DAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVAD-Q---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~-~---~~~P~~~~~~~aa~l~  128 (344)
                      +++|++ ++|++||||++..                           .+|+|+||++++ +   +++ +++++++||+++
T Consensus        72 ~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~  149 (344)
T 2h6e_A           72 VEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLA  149 (344)
T ss_dssp             EEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGG
T ss_pred             EEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhh
Confidence            999999 9999999998652                           359999999999 7   899 999999999999


Q ss_pred             chHHHHHHHHHHh----cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCC-C
Q 019196          129 VAFGTSHVALVHR----AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSN-E  201 (344)
Q Consensus       129 ~~~~ta~~~l~~~----~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~  201 (344)
                      +.+.|||+++...    .++ ++++|||+|+ |++|++++|+|+.+  |++|++++++++++++++++|+++++++++ .
T Consensus       150 ~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (344)
T 2h6e_A          150 DAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAE  227 (344)
T ss_dssp             THHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHH
T ss_pred             hhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccch
Confidence            9999999999654    288 9999999999 99999999999999  999999999999999999999999987643 2


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccccc
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH  280 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (344)
                      +.      ..+.+.+.++|++|||+|.+ .++.++++++++|+++.+|...+.. .++...++.+++++.|+....    
T Consensus       228 ~~------~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~----  296 (344)
T 2h6e_A          228 SL------INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRV-SLEAFDTAVWNKKLLGSNYGS----  296 (344)
T ss_dssp             HH------HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCC-CCCHHHHHHTTCEEEECCSCC----
T ss_pred             HH------HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCc-ccCHHHHhhCCcEEEEEecCC----
Confidence            21      22334456899999999986 8899999999999999999865432 355566788999999876443    


Q ss_pred             CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          281 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       281 ~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                           .+.++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|+++
T Consensus       297 -----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          297 -----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             -----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence                 46789999999999999888 9999999999999999888889999863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.1e-50  Score=367.16  Aligned_cols=307  Identities=21%  Similarity=0.237  Sum_probs=261.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCC--------CCCCCCeEEEEEEEeecChhhHHHHHhcC-C-CCCCCCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIP--------QLNSSTAVRVRVKATSLNYANYLQILGKY-Q-EKPPLPFV   70 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~eV~I~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~   70 (344)
                      |||+++.+++.            +.++++|.|        + |+++||+|||.+++||++|++.+.+.. . ....+|.+
T Consensus         9 mka~~~~~~~~------------l~~~~~~~P~~~~~~~~~-~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v   75 (363)
T 3m6i_A            9 NIGVFTNPQHD------------LWISEASPSLESVQKGEE-LKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHV   75 (363)
T ss_dssp             CEEEEECTTCC------------EEEEECSSCHHHHHHTCS-CCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEE
T ss_pred             ceeEEEeCCCc------------EEEEEecCCccccccCCC-cCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcc
Confidence            89999987665            445789999        9 699999999999999999999987542 2 12467999


Q ss_pred             cCcceeEEEEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCC
Q 019196           71 PGSDYSGTVDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGC  119 (344)
Q Consensus        71 ~G~e~~G~V~~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~  119 (344)
                      +|||++|+|+++|+++++|++||||++.                            ..+|+|+||+++++   +++|+ +
T Consensus        76 ~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~  154 (363)
T 3m6i_A           76 LGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-M  154 (363)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-C
T ss_pred             cCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-C
Confidence            9999999999999999999999999864                            14699999999999   99999 9


Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++||++ .+++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|++ |++++++++|+++++++ ++.++++
T Consensus       155 s~~~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~  230 (363)
T 3m6i_A          155 SYENGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTH  230 (363)
T ss_dssp             CHHHHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEE
T ss_pred             CHHHHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccc
Confidence            99999987 6899999999 7899999999999998 99999999999999996 99999999999999999 6666554


Q ss_pred             C--CCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          199 S--NESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~--~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      .  ..+..+..+++.+.+.+.++|++|||+|.+ .+..++++++++|+++.+|...... .++...++.+++++.++...
T Consensus       231 ~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          231 KVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEI-QIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             ECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCC-CCCHHHHHHHTCEEEECCSC
T ss_pred             cccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCc-cccHHHHHhcCcEEEEccCC
Confidence            3  222223356677778888999999999986 7899999999999999999866543 35667788999999987643


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcC-CcceeEEEEecC
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDR-KVIGKVMIAFDD  336 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~-~~~gkvvi~~~~  336 (344)
                                .+.++++++++++|+++  +.++++|+|+++++||+.+.++ ...+|+|++.++
T Consensus       310 ----------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 ----------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             ----------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             ----------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence                      14578899999999995  5688999999999999999987 577899998863

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=5e-50  Score=361.60  Aligned_cols=290  Identities=23%  Similarity=0.317  Sum_probs=251.2

Q ss_pred             eeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019196           24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF-----   98 (344)
Q Consensus        24 ~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~-----   98 (344)
                      +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|+++|||++|+|+++|+++++|++||||+..     
T Consensus        22 l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~   99 (357)
T 2cf5_A           22 LSPYTYTLRE-TGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGC   99 (357)
T ss_dssp             EEEEEEECCC-CCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEEC
T ss_pred             cEEEEecCCC-CCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCC
Confidence            5567899999 69999999999999999999999886542 4679999999999999999999999999999741     


Q ss_pred             ------------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCC
Q 019196           99 ------------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS  145 (344)
Q Consensus        99 ------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  145 (344)
                                                    ..+|+|+||+++++   +++|+++++++||++++.+.|||+++. ..+++
T Consensus       100 Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~  178 (357)
T 2cf5_A          100 CGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGLK  178 (357)
T ss_dssp             CSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTSTT
T ss_pred             CCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCCC
Confidence                                          14699999999998   999999999999999999999999985 57788


Q ss_pred             -CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 -SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 -~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                       ++++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|++.++++++.      +.+.+.+  .++|++|
T Consensus       179 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~------~~~~~~~--~g~D~vi  249 (357)
T 2cf5_A          179 QPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ------AKMSELA--DSLDYVI  249 (357)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCH------HHHHHST--TTEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccH------HHHHHhc--CCCCEEE
Confidence             9999999997 99999999999999999999999999999888 9999999987642      2233333  3799999


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                      ||+|.+ .++.++++++++|+++.+|...+....++.. ++.+++++.|+....         .+.++++++++++|+++
T Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~  319 (357)
T 2cf5_A          250 DTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGS---------MKETEEMLEFCKEKGLS  319 (357)
T ss_dssp             ECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCC---------HHHHHHHHHHHHHTTCC
T ss_pred             ECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCC---------HHHHHHHHHHHHcCCCC
Confidence            999975 7899999999999999999766443324445 788999999876543         36788999999999999


Q ss_pred             EeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          303 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       303 ~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      +.+ ++|+++++++||+.+.+++..||+|+++++
T Consensus       320 ~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          320 SII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             CCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             Cce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            766 799999999999999999888999999865

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=6.5e-51  Score=373.18  Aligned_cols=321  Identities=22%  Similarity=0.342  Sum_probs=268.0

Q ss_pred             CceEEecccCCCCcccc----CCCC------------ceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcC---
Q 019196            1 MEALVCRKLGDPTVSIH----DEKS------------PIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY---   61 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~----~~~~------------~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~---   61 (344)
                      |||+++.++++++-...    +.++            +-+.++++|.|++|+++||+|||.+++||++|++.+.|..   
T Consensus         3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~   82 (404)
T 3ip1_A            3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY   82 (404)
T ss_dssp             EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB
T ss_pred             ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc
Confidence            89999998888761100    0001            1366778999984599999999999999999999987642   


Q ss_pred             ---CCCCCCCcccCcceeEEEEEeCCCC------CCCCCCCEEEEe---------------------------cCCCcee
Q 019196           62 ---QEKPPLPFVPGSDYSGTVDAVGPNV------SNFKVGDTVCGF---------------------------AALGSFA  105 (344)
Q Consensus        62 ---~~~~~~p~~~G~e~~G~V~~~g~~~------~~~~~Gd~V~~~---------------------------~~~g~~~  105 (344)
                         +....+|.++|||++|+|+++|+++      ++|++||||++.                           ..+|+|+
T Consensus        83 ~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~a  162 (404)
T 3ip1_A           83 ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA  162 (404)
T ss_dssp             BSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSB
T ss_pred             ccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCc
Confidence               2234679999999999999999999      889999999863                           2469999


Q ss_pred             eEEeecc---cCCCCCCC------HHHHhhccchHHHHHHHHHHh-cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eE
Q 019196          106 QFIVADQ---FPVPKGCD------LLAAAALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TI  174 (344)
Q Consensus       106 ~~~~~~~---~~~P~~~~------~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v  174 (344)
                      ||+++++   +++|++++      +.++|+++.+++|||+++... ++++++++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~V  241 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKV  241 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEE
Confidence            9999998   89999875      566888999999999998654 48999999999998 9999999999999999 89


Q ss_pred             EEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh--hHHHHHhcc----cCCCEEEEEe
Q 019196          175 IAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK--LTKESLKLL----NWGAQILVIG  248 (344)
Q Consensus       175 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l----~~~G~~v~~g  248 (344)
                      ++++++++|+++++++|++.++++++.++   .+.+.+.+.+.++|++|||+|.+  .+..+++++    +++|+++.+|
T Consensus       242 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G  318 (404)
T 3ip1_A          242 ILSEPSEVRRNLAKELGADHVIDPTKENF---VEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA  318 (404)
T ss_dssp             EEECSCHHHHHHHHHHTCSEEECTTTSCH---HHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred             EEECCCHHHHHHHHHcCCCEEEcCCCCCH---HHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence            99999999999999999999999988877   66777788888999999999986  566666777    9999999999


Q ss_pred             ccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--EeeeeeechhhHHHHHHHHHcCCc
Q 019196          249 FASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKV  326 (344)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~~~~~~~~l~~~~ea~~~~~~~~~  326 (344)
                      ...+.. .++...++.+++++.|+.....        .+.++++++++++| ++  +.++++|+|+++++||+.+.    
T Consensus       319 ~~~~~~-~~~~~~~~~~~~~i~g~~~~~~--------~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----  384 (404)
T 3ip1_A          319 RADAKI-PLTGEVFQVRRAQIVGSQGHSG--------HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----  384 (404)
T ss_dssp             CCCSCE-EECHHHHHHTTCEEEECCCCCS--------TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----
T ss_pred             CCCCCC-cccHHHHhccceEEEEecCCCc--------hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----
Confidence            876553 4566778899999998764221        25678999999999 76  46889999999999999887    


Q ss_pred             ceeEEEEecCCCC
Q 019196          327 IGKVMIAFDDMKS  339 (344)
Q Consensus       327 ~gkvvi~~~~~~~  339 (344)
                      .||+|+++++++.
T Consensus       385 ~GKvvl~~~~~~~  397 (404)
T 3ip1_A          385 TDKSLVKVTMLNE  397 (404)
T ss_dssp             TCTTCSCEEEECC
T ss_pred             CCcEEEecCCCCC
Confidence            5799988865443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.5e-50  Score=355.70  Aligned_cols=295  Identities=31%  Similarity=0.480  Sum_probs=252.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.           ++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus         1 Mka~~~~~~g~~~~-----------l~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE-----------LVDLPEPE-AEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE   68 (302)
T ss_dssp             CEEEEECSTTSCEE-----------EEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET
T ss_pred             CeEEEEcCCCCchh-----------eEECCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE
Confidence            99999999887632           34888998 6999999999999999999999998765444679999999999997


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCC
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG  157 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g  157 (344)
                                 ||||++...+|+|+||+++++   +++|+++++++||+++++++|||+++.+.+ ++++++|||+|++|
T Consensus        69 -----------GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G  136 (302)
T 1iz0_A           69 -----------GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAG  136 (302)
T ss_dssp             -----------TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTB
T ss_pred             -----------CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCc
Confidence                       999999988899999999998   999999999999999999999999997677 99999999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHh
Q 019196          158 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK  236 (344)
Q Consensus       158 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (344)
                      ++|++++|+|+..|++|+++++++++++.++++|++.++++++ .++   .+.+      .++|++|| +|.+.+..+++
T Consensus       137 ~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~---~~~~------~~~d~vid-~g~~~~~~~~~  206 (302)
T 1iz0_A          137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPER---AKAW------GGLDLVLE-VRGKEVEESLG  206 (302)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHH---HHHT------TSEEEEEE-CSCTTHHHHHT
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhH---HHHh------cCceEEEE-CCHHHHHHHHH
Confidence            9999999999999999999999999999999999999988754 332   2221      58999999 99888999999


Q ss_pred             cccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHH---HHHCCceeEeeeeeechhh
Q 019196          237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL---WAAKGLITIHISHTYSPSE  313 (344)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~g~i~~~~~~~~~l~~  313 (344)
                      +++++|+++.+|...+....++...++.+++++.|+....+     ....+.++++++   ++++|++++.++++|++++
T Consensus       207 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  281 (302)
T 1iz0_A          207 LLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL-----LREGALVEEALGFLLPRLGRELRPVVGPVFPFAE  281 (302)
T ss_dssp             TEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHH-----TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGG
T ss_pred             hhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccch-----hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHH
Confidence            99999999999977654334555667889999999875432     112467888888   9999999999999999999


Q ss_pred             HHHHHHHHHcCCcceeEEEEe
Q 019196          314 ANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       314 ~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +++||+.+.+++..||+|+++
T Consensus       282 ~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          282 AEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999888889999863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-50  Score=359.87  Aligned_cols=313  Identities=23%  Similarity=0.296  Sum_probs=257.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|+++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|+++|||++|+|+
T Consensus         4 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   73 (328)
T 1xa0_A            4 FQAFVVNKTETEFT---------AGVQTISMDD-LPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (328)
T ss_dssp             EEEEEEEEETTEEE---------EEEEEEEGGG-SCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             ceEEEEecCCCcce---------eEEEeccCCC-CCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEE
Confidence            89999999885422         5567899999 6999999999999999999999988655434679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHH--HhcCCCCCC-
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQ-  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~~~-  148 (344)
                      +.  ++++|++||||++..      .+|+|+||+++++   +++|+++++++||++++.+.|||.++.  ..+++++++ 
T Consensus        74 ~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~  151 (328)
T 1xa0_A           74 SS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERG  151 (328)
T ss_dssp             EC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             ec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCc
Confidence            95  568899999999753      4699999999998   999999999999999999999998875  346788886 


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|++|++++|+|+..|++|++++++++++++++++|+++++++++.+ .    +..+...+.++|++|||+|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~----~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-A----ERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC--------------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-H----HHHHHhcCCcccEEEECCcH
Confidence            999999999999999999999999999999999999999999999999876532 1    11222234589999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      +.+..++++++++|+++.+|...+.....+...++.+++++.|+.....   ......+.++.+.+++++| +++ ++++
T Consensus       227 ~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g-l~~-~~~~  301 (328)
T 1xa0_A          227 RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYC---PMDLRLRIWERLAGDLKPD-LER-IAQE  301 (328)
T ss_dssp             TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSC---CHHHHHHHHHHHHTTTCCC-HHH-HEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccC---CHHHHHHHHHHHHHHHHcC-Cce-eeeE
Confidence            8899999999999999999976643333444566789999998743211   1122346677888888888 766 4689


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEec
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAFD  335 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~~  335 (344)
                      |+++++++||+.+.+++..||+|++++
T Consensus       302 ~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          302 ISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             EEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             eCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            999999999999999888999999863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=3.8e-49  Score=353.49  Aligned_cols=311  Identities=23%  Similarity=0.309  Sum_probs=264.4

Q ss_pred             CceEEecc--cCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcc----
Q 019196            1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD----   74 (344)
Q Consensus         1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----   74 (344)
                      |||+++++  +|.+.       ...+.++++|.|+ |+++||+|||.+++||++|++.+.+...  ..+|.++|||    
T Consensus         8 mka~v~~~~~~g~~~-------~~~l~~~~~~~P~-~~~~eVlVkv~a~gi~~~d~~~~~~~~~--~~~p~~~G~e~g~~   77 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPG-------RDTFSFVETPLGE-PAEGQILVKNEYLSLDPAMRGWMNDARS--YIPPVGIGEVMRAL   77 (336)
T ss_dssp             EEEEEECSCCSSSCC-------TTSEEEEEEECCC-CCTTCEEEEEEEEECCTHHHHHHSCSCC--SSCCCCTTSBCCCE
T ss_pred             ccEEEEEecCCCCCC-------CCceEEEeccCCC-CCCCEEEEEEEEEEeCHHHHhhhhcccc--cCCCCCCCcccCCc
Confidence            79999986  23110       1226778999999 6999999999999999999988766432  2346677777    


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHH--hhccchHHHHHHHHHHhcCCCCCCE
Q 019196           75 YSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAA--AALPVAFGTSHVALVHRAQLSSGQV  149 (344)
Q Consensus        75 ~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~~~~  149 (344)
                      ++|+|++  +++++|++||||++.   |+|+||+++++   +++|+++++.++  |+++++++|||+++.+.++++++++
T Consensus        78 ~~G~V~~--~~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~  152 (336)
T 4b7c_A           78 GVGKVLV--SKHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGET  152 (336)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCE
T ss_pred             eEEEEEe--cCCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCE
Confidence            7999999  458899999999986   89999999999   999999987776  7799999999999988999999999


Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      |||+|++|++|++++|+++..|++|+++++++++.+.+ +++|++.++++++.++   .+.+.+.+ +.++|++|||+|.
T Consensus       153 vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~d~vi~~~g~  228 (336)
T 4b7c_A          153 VVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDL---AAGLKREC-PKGIDVFFDNVGG  228 (336)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCH---HHHHHHHC-TTCEEEEEESSCH
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHH---HHHHHHhc-CCCceEEEECCCc
Confidence            99999999999999999999999999999999999999 8999999999988777   55555555 5689999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCC----C--CCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASG----E--IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                      +.+..++++++++|+++.+|....    .  ....+...++.+++++.++....+.    ....+.++++++++++|+++
T Consensus       229 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~----~~~~~~~~~~~~l~~~g~l~  304 (336)
T 4b7c_A          229 EILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYA----QRFPEGLKEMATWLAEGKLQ  304 (336)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGG----GGHHHHHHHHHHHHHTTSSC
T ss_pred             chHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhh----hhhHHHHHHHHHHHHCCCcc
Confidence            989999999999999999997652    1  1234555678899999998765542    22457899999999999999


Q ss_pred             EeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          303 IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       303 ~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      +.+...|+++++++||+.+.+++..||+|+++
T Consensus       305 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          305 SREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88777899999999999999999999999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.1e-49  Score=361.76  Aligned_cols=310  Identities=26%  Similarity=0.308  Sum_probs=253.7

Q ss_pred             CceEEecccCCCCccccCCCCceeee-cccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC--------------CCC
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLS-KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--------------EKP   65 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~--------------~~~   65 (344)
                      |||+++.++|.++.         +.+ +++|.|++|+++||+|||.+++||++|++.+.|.++              ...
T Consensus        22 mka~~~~~~g~~~~---------l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~   92 (375)
T 2vn8_A           22 SMAWVIDKYGKNEV---------LRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGE   92 (375)
T ss_dssp             EEEEEBSSCCSGGG---------CEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTT
T ss_pred             ceeEEeccCCCccc---------eEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccc
Confidence            89999999886543         445 788888834899999999999999999999887531              112


Q ss_pred             CCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecC---CCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHH
Q 019196           66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA---LGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV  139 (344)
Q Consensus        66 ~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~  139 (344)
                      .+|+++|||++|+|+++|+++++|++||||++...   +|+|+||+++++   +++|+++++++||+++.+++|||+++.
T Consensus        93 ~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~  172 (375)
T 2vn8_A           93 EFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAIN  172 (375)
T ss_dssp             TCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHT
T ss_pred             cCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHH
Confidence            37999999999999999999999999999998753   699999999998   999999999999999999999999997


Q ss_pred             HhcC----CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          140 HRAQ----LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       140 ~~~~----~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      +.++    ++++++|||+|++|++|++++|+|+..|++|++++ ++++++.++++|++.++++++.++   .+.+.+   
T Consensus       173 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~---~~~~~~---  245 (375)
T 2vn8_A          173 KVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSV---EEQLKS---  245 (375)
T ss_dssp             TTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCH---HHHHHT---
T ss_pred             HhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHH---HHHHhh---
Confidence            7788    89999999999889999999999999999999988 578899999999999999887765   333322   


Q ss_pred             CCCccEEEeCCChh--hHHHHHhcccCCCEEEEEeccCCCC-CC--cch------hhhhc-------cceEEEEEEeccc
Q 019196          216 LKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEI-PV--IPA------NIALV-------KNWTVHGLYWGSY  277 (344)
Q Consensus       216 ~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~-~~--~~~------~~~~~-------~~~~~~~~~~~~~  277 (344)
                      ..++|++|||+|.+  .+..++++++++|+++.+|...... ..  .+.      ..++.       ++..+.+...   
T Consensus       246 ~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---  322 (375)
T 2vn8_A          246 LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF---  322 (375)
T ss_dssp             SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC---
T ss_pred             cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe---
Confidence            25899999999986  3478899999999999998643210 00  000      01122       3333332211   


Q ss_pred             cccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                         .+.  .+.++++++++++|++++.++++|+++++++||+.+.+++..||+|+++
T Consensus       323 ---~~~--~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          323 ---MAS--GPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             ---CCC--HHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             ---CCC--HHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence               111  4678999999999999998999999999999999999988889999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=3.9e-49  Score=356.17  Aligned_cols=318  Identities=22%  Similarity=0.328  Sum_probs=266.5

Q ss_pred             CceEEe-ccc---CCCCccccCCCCceeeecccCCCCCC-CCCeEEEEEEEeecChhhHHHHHh----cCCCCCCCCccc
Q 019196            1 MEALVC-RKL---GDPTVSIHDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILG----KYQEKPPLPFVP   71 (344)
Q Consensus         1 m~a~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~I~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~   71 (344)
                      |||+++ .++   |.+.       ..-+.++++|.|+ | +++||+|||.+++||++|++.+.+    .+.....+|.++
T Consensus         9 mka~v~~~~~~~~g~p~-------~~~l~~~~~~~P~-~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~   80 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPV-------AENFRMEEVYLPD-NINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVV   80 (357)
T ss_dssp             EEEEEECCCCCTTSCCC-------GGGEEEEEEECCS-CCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBC
T ss_pred             ceEEEEeccCCCCCCCC-------cCceEEEeecCCC-CCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccc
Confidence            899999 565   5430       0126667899998 7 999999999999999999987765    232234578899


Q ss_pred             CcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCC-----CHHHHhhccchHHHHHHHHHHhcC
Q 019196           72 GSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGC-----DLLAAAALPVAFGTSHVALVHRAQ  143 (344)
Q Consensus        72 G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~-----~~~~aa~l~~~~~ta~~~l~~~~~  143 (344)
                      |||++|+|++  +++++|++||||++..  |+|+||++++.   +++|+++     +++ +|+++++++|||+++.+.++
T Consensus        81 G~E~~G~V~~--~~v~~~~vGdrV~~~~--G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~  155 (357)
T 2zb4_A           81 DGGGIGIIEE--SKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGH  155 (357)
T ss_dssp             EEEEEEEEEE--ECSTTCCTTCEEEEEE--EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSC
T ss_pred             cccEEEEEEe--cCCCCCCCCCEEEecC--CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcC
Confidence            9999999999  8899999999999875  89999999998   9999999     555 67788999999999988899


Q ss_pred             CCCC--CEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSG--QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~--~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ++++  ++|||+|++|++|++++|+++..|+ +|+++++++++++.+++ +|++.++++.+.+.   .+.+.+.+.+ ++
T Consensus       156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~---~~~~~~~~~~-~~  231 (357)
T 2zb4_A          156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNV---AEQLRESCPA-GV  231 (357)
T ss_dssp             CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCH---HHHHHHHCTT-CE
T ss_pred             CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHH---HHHHHHhcCC-CC
Confidence            9999  9999999999999999999999999 99999999999998876 99999999887666   4555555655 89


Q ss_pred             cEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcc---------hhhhhccceEEEEEEeccccccCchhHHHHHH
Q 019196          220 DVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP---------ANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR  290 (344)
Q Consensus       220 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (344)
                      |++|||+|...+..++++++++|+++.+|...+.....+         ...++.+++++.++....+    +....+.++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~  307 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNY----KDKFEPGIL  307 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGG----GGGHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhh----hHHHHHHHH
Confidence            999999999888999999999999999997654211122         1356789999998765332    233467899


Q ss_pred             HHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCCCC
Q 019196          291 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKS  339 (344)
Q Consensus       291 ~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~~~  339 (344)
                      ++++++++|++++.+...|+|+++++||+.+.+++..||+|++++++.+
T Consensus       308 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~~  356 (357)
T 2zb4_A          308 QLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEIS  356 (357)
T ss_dssp             HHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCCCC
T ss_pred             HHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecccc
Confidence            9999999999998777789999999999999998888999999977543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.9e-49  Score=358.82  Aligned_cols=305  Identities=21%  Similarity=0.265  Sum_probs=260.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      ||+..+..++.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+|+++|||++|+|+
T Consensus        15 mk~~~~~~~~~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~   83 (366)
T 1yqd_A           15 VKAFGWAARDQSGH---------LSPFNFSRRA-TGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVT   83 (366)
T ss_dssp             EEEEEEEECSTTCC---------EEEEEEEECC-CCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEE
T ss_pred             eeEEEEEEcCCCCC---------cEEEEccCCC-CCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEE
Confidence            67777776665432         5667899999 69999999999999999999999886642 4579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe-----------------------------------cCCCceeeEEeecc---cCCCCCCCHH
Q 019196           81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQ---FPVPKGCDLL  122 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~  122 (344)
                      ++|+++++|++||||+..                                   ..+|+|+||+++++   +++|++++++
T Consensus        84 ~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~  163 (366)
T 1yqd_A           84 EVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLD  163 (366)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTT
T ss_pred             EECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHH
Confidence            999999999999999741                                   14599999999998   9999999999


Q ss_pred             HHhhccchHHHHHHHHHHhcCCC-CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCC
Q 019196          123 AAAALPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSN  200 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~-~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~  200 (344)
                      +||++++++.|||+++. ..+++ ++++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|++.++++.+
T Consensus       164 ~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~  241 (366)
T 1yqd_A          164 GGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRD  241 (366)
T ss_dssp             TTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTC
T ss_pred             HhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccC
Confidence            99999999999999985 56787 9999999997 99999999999999999999999999998887 899999998765


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccc
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI  279 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (344)
                      .      +.+.+.+  .++|++|||+|.. .++.++++++++|+++.+|...... .++...++.+++++.++....   
T Consensus       242 ~------~~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~---  309 (366)
T 1yqd_A          242 Q------EQMQAAA--GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPL-ELPAFSLIAGRKIVAGSGIGG---  309 (366)
T ss_dssp             H------HHHHHTT--TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCE-EECHHHHHTTTCEEEECCSCC---
T ss_pred             H------HHHHHhh--CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCC-CcCHHHHHhCCcEEEEecCCC---
Confidence            2      2233333  3799999999975 6889999999999999999765432 245566788999999876543   


Q ss_pred             cCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          280 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       280 ~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                            .+.++++++++++|++++.+ ++|+|+++++||+.+.+++..||+|++++++
T Consensus       310 ------~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~~  360 (366)
T 1yqd_A          310 ------MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVGNT  360 (366)
T ss_dssp             ------HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHHHH
T ss_pred             ------HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEcccc
Confidence                  36788999999999999876 7999999999999999998889999998653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.3e-50  Score=365.65  Aligned_cols=298  Identities=19%  Similarity=0.199  Sum_probs=256.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCC---CcccCcceeE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL---PFVPGSDYSG   77 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G   77 (344)
                      |||+++++++..           +.++++|.|+ |+++||+|||.+++||++|++.+.|.++. ..+   |.++|||++|
T Consensus         1 MkA~~~~~~~~~-----------l~~~~~p~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G   67 (357)
T 2b5w_A            1 MKAIAVKRGEDR-----------PVVIEKPRPE-PESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG   67 (357)
T ss_dssp             CEEEEEETTCSS-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE
T ss_pred             CeEEEEeCCCCc-----------eEEEECCCCC-CCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE
Confidence            999999998872           3457899999 69999999999999999999999987543 346   8999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEe--------------------------------cCCCceeeEEeecc---cCCCCCCCHH
Q 019196           78 TVDAVGPNVSNFKVGDTVCGF--------------------------------AALGSFAQFIVADQ---FPVPKGCDLL  122 (344)
Q Consensus        78 ~V~~~g~~~~~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~---~~~P~~~~~~  122 (344)
                       |+++|++ ++|++||||++.                                ..+|+|+||+++++   +++|++++ +
T Consensus        68 -V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~  144 (357)
T 2b5w_A           68 -VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E  144 (357)
T ss_dssp             -EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-T
T ss_pred             -EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-h
Confidence             9999999 999999999875                                12599999999998   99999999 5


Q ss_pred             HHhhccchHHHHHHHHHHhcCCCCC------CEEEEecCCChHHHHH-HHHH-HHcCCe-EEEEecCHH---HHHHHHhc
Q 019196          123 AAAALPVAFGTSHVALVHRAQLSSG------QVLLVLGAAGGVGVAA-VQIG-KVCGAT-IIAVARGAE---KIKFLKSL  190 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~~~------~~vlI~g~~g~~G~~~-~~~~-~~~g~~-v~~~~~~~~---~~~~~~~~  190 (344)
                      + |+++.+++|||+++ +.++++++      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   |+++++++
T Consensus       145 ~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l  221 (357)
T 2b5w_A          145 L-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL  221 (357)
T ss_dssp             T-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT
T ss_pred             h-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc
Confidence            5 55889999999999 67889999      99999999 9999999 9999 999997 999999988   99999999


Q ss_pred             CCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhh----hcc
Q 019196          191 GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIA----LVK  265 (344)
Q Consensus       191 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~  265 (344)
                      |++++ ++++.++.   + +.+. .+ ++|++|||+|.+ .+..++++++++|+++.+|........++...+    +.+
T Consensus       222 Ga~~v-~~~~~~~~---~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  294 (357)
T 2b5w_A          222 DATYV-DSRQTPVE---D-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLH  294 (357)
T ss_dssp             TCEEE-ETTTSCGG---G-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHT
T ss_pred             CCccc-CCCccCHH---H-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhC
Confidence            99999 98877763   3 4444 44 899999999985 789999999999999999977632233555556    789


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCC--c-eeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG--L-ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~-i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++++.|+....         .+.++++++++++|  + +++.++++|+++++++||+.+   +..||+|+++++
T Consensus       295 ~~~i~g~~~~~---------~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          295 NKALVGSVNSH---------VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             TCEEEECCCCC---------HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             CeEEEEeccCC---------HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            99999876543         47889999999999  8 688888999999999999988   357899999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-49  Score=361.59  Aligned_cols=306  Identities=19%  Similarity=0.232  Sum_probs=258.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCC-CCe------EEEEEEEeecChhhHHHHHhcCCCCCCCCcccCc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STA------VRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS   73 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~e------V~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~   73 (344)
                      |||+++++++.            +.++++|.|+ |+ ++|      |+|||.+++||++|++.+.|.++  ..+|+++||
T Consensus         3 Mka~~~~~~~~------------l~~~~~p~P~-~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~p~v~Gh   67 (398)
T 1kol_A            3 NRGVVYLGSGK------------VEVQKIDYPK-MQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGH   67 (398)
T ss_dssp             EEEEEEEETTE------------EEEEEECCCC-SBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCC
T ss_pred             cEEEEEecCCc------------eEEEEecCCC-CCCCCcccccceEEEEEEEEeechhhHHHHcCCCC--CCCCcccCc
Confidence            89999987764            4457899998 56 888      99999999999999999988653  356899999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEe-------------------------------------cCCCceeeEEeecc----
Q 019196           74 DYSGTVDAVGPNVSNFKVGDTVCGF-------------------------------------AALGSFAQFIVADQ----  112 (344)
Q Consensus        74 e~~G~V~~~g~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~----  112 (344)
                      |++|+|+++|+++++|++||||+..                                     ..+|+|+||+++++    
T Consensus        68 E~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~  147 (398)
T 1kol_A           68 EITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN  147 (398)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH
T ss_pred             ccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe
Confidence            9999999999999999999999741                                     12489999999984    


Q ss_pred             -cCCCCCCCHHH----HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHH
Q 019196          113 -FPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKF  186 (344)
Q Consensus       113 -~~~P~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~  186 (344)
                       +++|+++++++    +|+++++++|||+++. .++++++++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++
T Consensus       148 ~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          148 LLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             CEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             EEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence             89999999988    7889999999999995 789999999999997 9999999999999999 79999999999999


Q ss_pred             HHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEeCCChh----------------hHHHHHhcccCCCEEEEEec
Q 019196          187 LKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGK----------------LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       187 ~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ++++|++ ++++++.+ +   .+.+.+.+.+.++|++|||+|.+                .+..++++++++|+++.+|.
T Consensus       226 a~~lGa~-~i~~~~~~~~---~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~  301 (398)
T 1kol_A          226 AKAQGFE-IADLSLDTPL---HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL  301 (398)
T ss_dssp             HHHTTCE-EEETTSSSCH---HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             HHHcCCc-EEccCCcchH---HHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence            9999997 77876654 4   45566667777999999999975                57899999999999999997


Q ss_pred             c-CCC-----------CCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee---EeeeeeechhhH
Q 019196          250 A-SGE-----------IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT---IHISHTYSPSEA  314 (344)
Q Consensus       250 ~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~---~~~~~~~~l~~~  314 (344)
                      . .+.           ...++...++.+++++.+....         ..+.++++++++++|+++   +.++++|+|+++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~  372 (398)
T 1kol_A          302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---------VMKYNRALMQAIMWDRINIAEVVGVQVISLDDA  372 (398)
T ss_dssp             CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---------HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGH
T ss_pred             ccCCcccccccccccccccccHHHHhhcccEEEecccC---------hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHH
Confidence            5 211           1123445567888888864321         146788999999999998   457899999999


Q ss_pred             HHHHHHHHcCCcceeEEEEecCC
Q 019196          315 NLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       315 ~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                      ++||+.+.+++. ||+|++++..
T Consensus       373 ~~A~~~~~~~~~-gKvvi~~~~~  394 (398)
T 1kol_A          373 PRGYGEFDAGVP-KKFVIDPHKT  394 (398)
T ss_dssp             HHHHHHHHHTCS-CEEEECTTCS
T ss_pred             HHHHHHHhCCCc-eEEEEEeCCc
Confidence            999999998887 9999998654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=6e-50  Score=366.26  Aligned_cols=307  Identities=19%  Similarity=0.207  Sum_probs=259.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCC-----CeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcce
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-----TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY   75 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~   75 (344)
                      |||+++++++.            +.++++|.|+++++     +||+|||.+++||++|++.+.|.++  ..+|+++|||+
T Consensus         3 MkA~~~~~~~~------------l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~   68 (398)
T 2dph_A            3 NKSVVYHGTRD------------LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEI   68 (398)
T ss_dssp             EEEEEEEETTE------------EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCE
T ss_pred             cEEEEEEcCCC------------EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCce
Confidence            89999998764            44578888883257     9999999999999999999988643  36789999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEe--------------------------------------cCCCceeeEEeecc-----
Q 019196           76 SGTVDAVGPNVSNFKVGDTVCGF--------------------------------------AALGSFAQFIVADQ-----  112 (344)
Q Consensus        76 ~G~V~~~g~~~~~~~~Gd~V~~~--------------------------------------~~~g~~~~~~~~~~-----  112 (344)
                      +|+|+++|+++++|++||||++.                                      ..+|+|+||+++++     
T Consensus        69 ~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~  148 (398)
T 2dph_A           69 TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYML  148 (398)
T ss_dssp             EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHC
T ss_pred             EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeE
Confidence            99999999999999999999852                                      13599999999984     


Q ss_pred             cCCCCCCCHHH----HhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH
Q 019196          113 FPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL  187 (344)
Q Consensus       113 ~~~P~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~  187 (344)
                      +++|+++++++    ||+++++++|||+++ +.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++
T Consensus       149 ~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 2dph_A          149 LKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL  226 (398)
T ss_dssp             EECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             EECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            89999999998    888999999999999 7889999999999997 9999999999999999 999999999999999


Q ss_pred             HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh---------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          188 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK---------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       188 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++|++ ++++.+.++.  .+.+.+.+.+.++|++|||+|.+               .+..++++++++|+++.+|....
T Consensus       227 ~~lGa~-~i~~~~~~~~--~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~  303 (398)
T 2dph_A          227 SDAGFE-TIDLRNSAPL--RDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVG  303 (398)
T ss_dssp             HTTTCE-EEETTSSSCH--HHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCS
T ss_pred             HHcCCc-EEcCCCcchH--HHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccc
Confidence            999996 8888776540  23445556667899999999975               47889999999999999997621


Q ss_pred             ------------CCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCcee--E--eeeeeechhhHHH
Q 019196          253 ------------EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--I--HISHTYSPSEANL  316 (344)
Q Consensus       253 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~--~--~~~~~~~l~~~~e  316 (344)
                                  ....++...++.+++++.++....         .+.++++++++++|+++  +  .++++|+|+++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---------~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~  374 (398)
T 2dph_A          304 SDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV---------TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPD  374 (398)
T ss_dssp             CCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG---------GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHH
T ss_pred             cccccccccccCCcccccHHHHhhcCCEEEEeccCc---------HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHH
Confidence                        111234455778899888754321         35678999999999998  6  5789999999999


Q ss_pred             HHHHHHcCCcceeEEEEecC
Q 019196          317 AFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       317 a~~~~~~~~~~gkvvi~~~~  336 (344)
                      ||+.+.+++. ||+|++++.
T Consensus       375 A~~~~~~~~~-gKvvv~~~~  393 (398)
T 2dph_A          375 GYAKFDKGSP-AKFVIDPHG  393 (398)
T ss_dssp             HHHHHHTTCS-CEEEECTTS
T ss_pred             HHHHHhcCCc-eEEEEecCc
Confidence            9999998887 999998853

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=5e-51  Score=364.80  Aligned_cols=314  Identities=23%  Similarity=0.265  Sum_probs=259.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.++.         +.++++|.|+ |+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus         5 mka~~~~~~g~~~~---------l~~~~~~~p~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~   74 (330)
T 1tt7_A            5 FQALQAEKNADDVS---------VHVKTISTED-LPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVV   74 (330)
T ss_dssp             EEEEEECCGGGSCC---------CEEEEEESSS-SCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEE
T ss_pred             ceEEEEecCCCCcc---------eeEeecCCCC-CCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEE
Confidence            89999999875322         4567899999 6999999999999999999999988655444679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHH--HhcCCCCCC-
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLSSGQ-  148 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~~~-  148 (344)
                      ++  ++++|++||||++..      .+|+|+||+++++   +++|+++++++||+++..+.|||.++.  ...++++++ 
T Consensus        75 ~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~  152 (330)
T 1tt7_A           75 SS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKG  152 (330)
T ss_dssp             EC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred             Ec--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCc
Confidence            96  467899999999753      4699999999998   999999999999999999999998875  346788886 


Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|++|++++|+|+.+|++|++++++++++++++++|++.++++++.+. +    ..+...+.++|++|||+|.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~-~----~~~~~~~~~~d~vid~~g~  227 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYD-G----TLKALSKQQWQGAVDPVGG  227 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCS-S----CCCSSCCCCEEEEEESCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchH-H----HHHHhhcCCccEEEECCcH
Confidence            9999999999999999999999999999999999999999999999987643210 0    0111124579999999999


Q ss_pred             hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          229 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      +.+..++++++++|+++.+|...+.....+...++.+++++.|+.....   ......+.++.+.+++++|++++.++++
T Consensus       228 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~~i~~~  304 (330)
T 1tt7_A          228 KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYC---PMDVRAAVWERMSSDLKPDQLLTIVDRE  304 (330)
T ss_dssp             HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSC---CHHHHHHHHHHTTTTSCCSCSTTSEEEE
T ss_pred             HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEecccc---CHHHHHHHHHHHHHHHhcCCcccccceE
Confidence            8889999999999999999976543223444566789999998753221   1222346678888888899999888899


Q ss_pred             echhhHHHHHHHHHcCCcceeEEEEe
Q 019196          309 YSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       309 ~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      |+++++++||+.+.+++..||+|+++
T Consensus       305 ~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          305 VSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             ECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999999999999988899999863

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=4.7e-50  Score=364.26  Aligned_cols=316  Identities=18%  Similarity=0.213  Sum_probs=262.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCC------------------
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ------------------   62 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~------------------   62 (344)
                      |||++... ++.          -+.++++|.|+ |+++||+|||.+++||++|++.+.|.++                  
T Consensus         8 mka~v~~~-~~~----------~l~~~~~~~P~-~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~   75 (379)
T 3iup_A            8 LRSRIKSS-GEL----------ELSLDSIDTPH-PGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTAR   75 (379)
T ss_dssp             EEEEECTT-SEE----------EEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred             HHHHHhcC-CCC----------ceEEEeccCCC-CCCCEEEEEEEEEecCHHHHHHhcCCcccccccccccccccccccc
Confidence            78887753 221          16668899999 6999999999999999999999988521                  


Q ss_pred             ----------CCCCCCcccCcceeEEEEEeCCCC-CCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhcc
Q 019196           63 ----------EKPPLPFVPGSDYSGTVDAVGPNV-SNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALP  128 (344)
Q Consensus        63 ----------~~~~~p~~~G~e~~G~V~~~g~~~-~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~  128 (344)
                                ....+|+++|||++|+|+++|+++ ++|++||||++... |+|+||+++++   +++|+++++++||+++
T Consensus        76 ~p~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~-G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  154 (379)
T 3iup_A           76 VPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG-AMYSQYRCIPADQCLVLPEGATPADGASSF  154 (379)
T ss_dssp             CCHHHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS-CCSBSEEEEEGGGEEECCTTCCHHHHTTSS
T ss_pred             CccccccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC-CcceeEEEeCHHHeEECCCCCCHHHHHhhh
Confidence                      023568999999999999999999 88999999999764 99999999998   9999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEec-CCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhH
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLG-AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV  207 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g-~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  207 (344)
                      +.++|||+++. ... +++++|||+| ++|++|++++|+|+.+|++|++++++++|+++++++|+++++++++.++   .
T Consensus       155 ~~~~ta~~~~~-~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~---~  229 (379)
T 3iup_A          155 VNPLTALGMVE-TMR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTF---M  229 (379)
T ss_dssp             HHHHHHHHHHH-HHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTH---H
T ss_pred             hhHHHHHHHHH-Hhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHH---H
Confidence            99999998774 444 8999999996 7799999999999999999999999999999999999999999988877   5


Q ss_pred             HHHHHHhcCCCccEEEeCCChh-hHHHHHhccc-----CC-----------CEEEEEeccCCCCCCcchhhhhccceEEE
Q 019196          208 KEFLKARKLKGVDVLYDPVGGK-LTKESLKLLN-----WG-----------AQILVIGFASGEIPVIPANIALVKNWTVH  270 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  270 (344)
                      +++.+.+.+.++|++|||+|++ ..+.++++++     ++           |+++.+|.....  ..+...++.+++++.
T Consensus       230 ~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~  307 (379)
T 3iup_A          230 QDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMG  307 (379)
T ss_dssp             HHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEE
T ss_pred             HHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEE
Confidence            6666677777899999999984 5567777774     44           555555543321  123345678899999


Q ss_pred             EEEecccc-ccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhH--HHHHHHHHcCCcceeEEEEecCC
Q 019196          271 GLYWGSYK-IHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA--NLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       271 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~--~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                      |+.+..+. ...++...+.++++++++.+ .+++.++++|+|+++  ++||+.+.+++..||+|++++..
T Consensus       308 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~g  376 (379)
T 3iup_A          308 GWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNKG  376 (379)
T ss_dssp             ECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTTT
T ss_pred             EEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCCC
Confidence            98876653 23566667788888999888 588899999999999  99999999999999999998754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3e-48  Score=380.27  Aligned_cols=308  Identities=27%  Similarity=0.393  Sum_probs=263.9

Q ss_pred             EEecccCCCCccccCCCCceeeecccC--CCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            4 LVCRKLGDPTVSIHDEKSPIVLSKTEP--IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      +.+..+|.++.         +.+.+.+  .|+ |+++||+|||.++|||++|++.+.|.++    .|.++|||++|+|++
T Consensus       213 l~~~~~G~~~~---------L~~~~~~~p~~~-~~~~eVlV~V~a~gin~~D~~~~~G~~~----~~~~lG~E~aG~V~~  278 (795)
T 3slk_A          213 LEATRPGSLDG---------LALVDEPTATAP-LGDGEVRIAMRAAGVNFRDALIALGMYP----GVASLGSEGAGVVVE  278 (795)
T ss_dssp             EEESSTTSSTT---------EEECCCHHHHSC-CCSSEEEEEEEEEEECHHHHHHTTTCCS----SCCCSCCCEEEEEEE
T ss_pred             EecCCCCCccc---------eEEEeCCccCCC-CCCCEEEEEEEEEccCHHHHHHHcCCCC----CCccccceeEEEEEE
Confidence            44556666643         4445555  356 5999999999999999999999988764    356799999999999


Q ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCCh
Q 019196           82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG  158 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~  158 (344)
                      +|+++++|++||||+++.. |+|++|++++.   +++|+++++++||++++.++|||+++.+.+++++|++|||+|++|+
T Consensus       279 vG~~V~~~~vGDrV~~~~~-G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGg  357 (795)
T 3slk_A          279 TGPGVTGLAPGDRVMGMIP-KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGG  357 (795)
T ss_dssp             ECSSCCSSCTTCEEEECCS-SCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBH
T ss_pred             eCCCCCcCCCCCEEEEEec-CCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCH
Confidence            9999999999999999865 99999999998   9999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcc
Q 019196          159 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL  238 (344)
Q Consensus       159 ~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (344)
                      +|++++|+||.+|++|+++++++ +.+.++ +|+++++++++.++   .+.+.+.+++.|+|+||||++++.+..+++++
T Consensus       358 vG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~---~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l  432 (795)
T 3slk_A          358 VGMAAIQLARHLGAEVYATASED-KWQAVE-LSREHLASSRTCDF---EQQFLGATGGRGVDVVLNSLAGEFADASLRML  432 (795)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCGG-GGGGSC-SCGGGEECSSSSTH---HHHHHHHSCSSCCSEEEECCCTTTTHHHHTSC
T ss_pred             HHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-cChhheeecCChhH---HHHHHHHcCCCCeEEEEECCCcHHHHHHHHHh
Confidence            99999999999999999999765 555555 99999999988887   67788889999999999999999999999999


Q ss_pred             cCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHH
Q 019196          239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF  318 (344)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~  318 (344)
                      +++|+++.+|....... .. .....+++++.++.+.   ...+....+.++++++++++|++++.++++|+++++++||
T Consensus       433 ~~~Gr~v~iG~~~~~~~-~~-~~~~~~~~~~~~~~l~---~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~  507 (795)
T 3slk_A          433 PRGGRFLELGKTDVRDP-VE-VADAHPGVSYQAFDTV---EAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEAL  507 (795)
T ss_dssp             TTCEEEEECCSTTCCCH-HH-HHHHSSSEEEEECCGG---GGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHH
T ss_pred             cCCCEEEEeccccccCc-cc-ccccCCCCEEEEeecc---ccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHH
Confidence            99999999996653221 11 1123467777766532   3345556789999999999999999999999999999999


Q ss_pred             HHHHcCCcceeEEEEecC
Q 019196          319 SAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       319 ~~~~~~~~~gkvvi~~~~  336 (344)
                      +.+.+++..||+|+++.+
T Consensus       508 ~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          508 RHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             HHHHHTCCCBEEEEECCC
T ss_pred             HHHhcCCccceEEEecCc
Confidence            999999999999999865

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.7e-48  Score=350.00  Aligned_cols=299  Identities=17%  Similarity=0.221  Sum_probs=249.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCC-CeEEEEEEEeecChhhHHHHHh--cCCCCCCC---CcccCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-TAVRVRVKATSLNYANYLQILG--KYQEKPPL---PFVPGSD   74 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~I~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e   74 (344)
                      |||++++++|+.           +.++++|.|+ |++ +||+|||.+++||++|++.+.|  .++ ...+   |+++|||
T Consensus         1 MkA~~~~~~g~~-----------l~~~~~~~P~-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~~~p~v~G~E   67 (366)
T 2cdc_A            1 MKAIIVKPPNAG-----------VQVKDVDEKK-LDSYGKIKIRTIYNGICGADREIVNGKLTLS-TLPKGKDFLVLGHE   67 (366)
T ss_dssp             CEEEEECTTSCC-----------CEEEECCGGG-SCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSE
T ss_pred             CeEEEEeCCCCc-----------eEEEECcCCC-CCCCCEEEEEEEEEeeccccHHHHcCCCCCC-CCCcCCCCCcCCcc
Confidence            999999998862           3347899999 599 9999999999999999999988  543 2345   8999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEe-----------------------------c-CCCceeeEEeecc---cCCCCCCCH
Q 019196           75 YSGTVDAVGPNVSNFKVGDTVCGF-----------------------------A-ALGSFAQFIVADQ---FPVPKGCDL  121 (344)
Q Consensus        75 ~~G~V~~~g~~~~~~~~Gd~V~~~-----------------------------~-~~g~~~~~~~~~~---~~~P~~~~~  121 (344)
                      ++|+|++  ++ ++|++||||++.                             . .+|+|+||+++++   +++|++++ 
T Consensus        68 ~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-  143 (366)
T 2cdc_A           68 AIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-  143 (366)
T ss_dssp             EEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-
T ss_pred             eEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-
Confidence            9999999  67 889999999863                             1 4699999999998   99999999 


Q ss_pred             HHHhhccchHHHHHHHHH--H--hcCCC--C-------CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH---HHHH
Q 019196          122 LAAAALPVAFGTSHVALV--H--RAQLS--S-------GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---EKIK  185 (344)
Q Consensus       122 ~~aa~l~~~~~ta~~~l~--~--~~~~~--~-------~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~  185 (344)
                      ++|+ ++.+++|||+++.  .  .++++  +       +++|||+|+ |++|++++|+++..|++|+++++++   ++.+
T Consensus       144 ~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          144 DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            8765 7789999999996  4  78898  8       999999999 9999999999999999999999998   8899


Q ss_pred             HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hH-HHHHhcccCCCEEEEEeccCCCCCCcchhh--
Q 019196          186 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFASGEIPVIPANI--  261 (344)
Q Consensus       186 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--  261 (344)
                      +++++|++.+ + .+ ++   .+.+.+ +. .++|++|||+|.+ .+ +.++++++++|+++.+|...+....++...  
T Consensus       222 ~~~~~ga~~v-~-~~-~~---~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~  293 (366)
T 2cdc_A          222 VIEETKTNYY-N-SS-NG---YDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQ  293 (366)
T ss_dssp             HHHHHTCEEE-E-CT-TC---SHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHH
T ss_pred             HHHHhCCcee-c-hH-HH---HHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhH
Confidence            9999999988 7 65 65   334444 44 6899999999985 67 899999999999999997665322345555  


Q ss_pred             -hhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCc------eeEeeeeeechhhHHHHHHHH-HcCCcceeEEEE
Q 019196          262 -ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL------ITIHISHTYSPSEANLAFSAI-EDRKVIGKVMIA  333 (344)
Q Consensus       262 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------i~~~~~~~~~l~~~~ea~~~~-~~~~~~gkvvi~  333 (344)
                       ++.+++++.|+....         .+.++++++++++|+      +++.++++|+|+++++||+.+ .+++..||+|++
T Consensus       294 ~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~  364 (366)
T 2cdc_A          294 EIVHTNKTIIGLVNGQ---------KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL  364 (366)
T ss_dssp             HHHHTTCEEEECCCCC---------HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEE
T ss_pred             HHHhcCcEEEEecCCC---------HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEe
Confidence             788999999875432         477899999999999      557788999999999999984 336678999998


Q ss_pred             ec
Q 019196          334 FD  335 (344)
Q Consensus       334 ~~  335 (344)
                      ++
T Consensus       365 ~~  366 (366)
T 2cdc_A          365 WE  366 (366)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=9.3e-46  Score=331.07  Aligned_cols=309  Identities=22%  Similarity=0.272  Sum_probs=253.9

Q ss_pred             CceEEeccc--CCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEE
Q 019196            1 MEALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   78 (344)
                      |||+++.++  |++.       ..-+.++++|.|+ |+++||+|||.+++||+.|... .    ....+|+++|||++|+
T Consensus         8 mka~~~~~~~~g~~~-------~~~l~~~e~~~P~-~~~~eVlVkv~a~gi~~~~~~~-~----~~~~~p~~~g~e~~G~   74 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPT-------QSDFELKTVELPP-LKNGEVLLEALFLSVDPYMRIA-S----KRLKEGAVMMGQQVAR   74 (333)
T ss_dssp             EEEEEECC-----CC-------GGGEEEEEEECCC-CCTTCEEEEEEEEECCTHHHHH-T----TTCCTTSBCCCCEEEE
T ss_pred             ccEEEEeecCCCCCC-------ccceEEEeCCCCC-CCCCEEEEEEEEeccCHHHccc-c----CcCCCCcccccceEEE
Confidence            799999885  5431       1125567899999 6999999999999999998732 1    1235688999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCC----CCHHH-HhhccchHHHHHHHHHHhcCCCCCCEE
Q 019196           79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKG----CDLLA-AAALPVAFGTSHVALVHRAQLSSGQVL  150 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~~~~~v  150 (344)
                      |++.  ++++|++||||++.   |+|+||++++.   +++|++    +++++ +|+++++++|||+++.+.++++++++|
T Consensus        75 Vv~~--~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~v  149 (333)
T 1v3u_A           75 VVES--KNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETV  149 (333)
T ss_dssp             EEEE--SCTTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEE
T ss_pred             EEec--CCCCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEE
Confidence            9995  57889999999985   78999999998   999997    88888 488999999999999888899999999


Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhcCCCccEEEeCCChh
Q 019196          151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (344)
                      ||+|++|++|++++++++..|++|+++++++++.+.++++|++.++++.+ .++   .+.+.+.+. .++|++|||+|.+
T Consensus       150 lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~~~~~~~~-~~~d~vi~~~g~~  225 (333)
T 1v3u_A          150 LVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL---EEALKKASP-DGYDCYFDNVGGE  225 (333)
T ss_dssp             EEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH---HHHHHHHCT-TCEEEEEESSCHH
T ss_pred             EEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHH---HHHHHHHhC-CCCeEEEECCChH
Confidence            99999999999999999999999999999999999999999999999877 555   334444444 5899999999998


Q ss_pred             hHHHHHhcccCCCEEEEEeccCCC------CCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeE
Q 019196          230 LTKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       230 ~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                      .+..++++++++|+++.+|...+.      ....+...++.+++++.|+....+   .+....+.++++++++++|++++
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~  302 (333)
T 1v3u_A          226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKWVLEGKIQY  302 (333)
T ss_dssp             HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGC---CTHHHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhc---chHHHHHHHHHHHHHHHCCCccC
Confidence            889999999999999999976531      111345567889999998765432   22344678999999999999998


Q ss_pred             eeeeeechhhHHHHHHHHHcCCcceeEEEEe
Q 019196          304 HISHTYSPSEANLAFSAIEDRKVIGKVMIAF  334 (344)
Q Consensus       304 ~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~  334 (344)
                      .+...++++++++||+.+.+++..||+|+++
T Consensus       303 ~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          303 HEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            7667789999999999999988899999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=4.3e-45  Score=328.39  Aligned_cols=316  Identities=20%  Similarity=0.254  Sum_probs=254.4

Q ss_pred             CceEEeccc--CCCCccccCCCCceeeec--ccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCC---CCCCcccCc
Q 019196            1 MEALVCRKL--GDPTVSIHDEKSPIVLSK--TEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---PPLPFVPGS   73 (344)
Q Consensus         1 m~a~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~   73 (344)
                      ||+++....  +.+.       ..-+.++  +++.|++|+++||+|||.++++|+.|. ...|.+...   ..+|+++||
T Consensus         5 mka~~m~a~~~~~p~-------~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~   76 (345)
T 2j3h_A            5 NKQVILKDYVSGFPT-------ESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQ   76 (345)
T ss_dssp             EEEEEECSCBSSSCC-------GGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTS
T ss_pred             ceEEEEecCCCCCCC-------ccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCC
Confidence            688888765  4442       1013444  777776359999999999999998875 445543211   246889999


Q ss_pred             ceeEEEEE--eCCCCCCCCCCCEEEEecCCCceeeEEeecc-----cCCCC---CCCHHHHhhccchHHHHHHHHHHhcC
Q 019196           74 DYSGTVDA--VGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-----FPVPK---GCDLLAAAALPVAFGTSHVALVHRAQ  143 (344)
Q Consensus        74 e~~G~V~~--~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~-----~~~P~---~~~~~~aa~l~~~~~ta~~~l~~~~~  143 (344)
                      |++|++.+  +|+++++|++||||++.   |+|+||+++++     +++|+   +++++ +|+++++++|||+++.+.++
T Consensus        77 e~~G~~~~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~  152 (345)
T 2j3h_A           77 PIQGYGVSRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCS  152 (345)
T ss_dssp             BCEEEEEEEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSC
T ss_pred             eeecceEEEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhC
Confidence            99999999  99999999999999986   78999999875     56775   45665 67788999999999988889


Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCC-CchhhHHHHHHHhcCCCccE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ++++++|||+|++|++|++++|+++..|++|+++++++++++.++ ++|++.++++.+. ++   .+.+.+.+ +.++|+
T Consensus       153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~---~~~~~~~~-~~~~d~  228 (345)
T 2j3h_A          153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDL---TAALKRCF-PNGIDI  228 (345)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCS---HHHHHHHC-TTCEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHH---HHHHHHHh-CCCCcE
Confidence            999999999999999999999999999999999999999999998 7999999998764 55   33344444 368999


Q ss_pred             EEeCCChhhHHHHHhcccCCCEEEEEeccCCC-----CCCcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHH
Q 019196          222 LYDPVGGKLTKESLKLLNWGAQILVIGFASGE-----IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA  296 (344)
Q Consensus       222 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  296 (344)
                      +|||+|.+.+..++++++++|+++.+|...+.     ....+...++.+++++.|+....+    ++...+.++++++++
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~  304 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDF----YDKYSKFLEFVLPHI  304 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGG----GGGHHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhh----hhhHHHHHHHHHHHH
Confidence            99999998889999999999999999976532     122344567789999988654432    123357799999999


Q ss_pred             HCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecC
Q 019196          297 AKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD  336 (344)
Q Consensus       297 ~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~  336 (344)
                      ++|++++.+..+|+|+++++||+.+.+++..||+|+++++
T Consensus       305 ~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             HTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             HCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            9999998887889999999999999999999999999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.2e-37  Score=334.17  Aligned_cols=288  Identities=23%  Similarity=0.314  Sum_probs=250.1

Q ss_pred             CCeEEEEEEEeecChhhHHHHHhcCCCC------CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEee
Q 019196           37 STAVRVRVKATSLNYANYLQILGKYQEK------PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVA  110 (344)
Q Consensus        37 ~~eV~I~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~  110 (344)
                      ++||+|+|.++++|+.|++...|.++..      ...|.++|+|++|+|.          +||+|+++...|+|++|+++
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g~~~~G~~Aeyv~v 1628 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMGMVPAEGLATSVLL 1628 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEEECSSCCSBSEEEC
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEEeecCCceeeEEEc
Confidence            7899999999999999999999876421      1246689999999883          79999999888999999999


Q ss_pred             cc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          111 DQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       111 ~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      ++   +++|+++++++||++++.++|||+++...+++++|++|||+|++|++|++++|+|+..|++|++++.++++++.+
T Consensus      1629 p~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l 1708 (2512)
T 2vz8_A         1629 LQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYL 1708 (2512)
T ss_dssp             CGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             ccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHH
Confidence            98   999999999999999999999999998889999999999999999999999999999999999999999999998


Q ss_pred             Hh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhh
Q 019196          188 KS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIAL  263 (344)
Q Consensus       188 ~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  263 (344)
                      ++    +|+++++++++.++   .+.+.+.+++.|+|+||||++++.+..++++++++|+++.+|..............+
T Consensus      1709 ~~~~~~lga~~v~~~~~~~~---~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~ 1785 (2512)
T 2vz8_A         1709 QARFPQLDETCFANSRDTSF---EQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVF 1785 (2512)
T ss_dssp             HHHCTTCCSTTEEESSSSHH---HHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGG
T ss_pred             HhhcCCCCceEEecCCCHHH---HHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeecccccccCccccccc
Confidence            75    78899999888776   666777788889999999999889999999999999999998653222122223457


Q ss_pred             ccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          264 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                      .+++++.++....+....+....+.++.+.+++.+|++++.++++|+++++++|++.+.+++..||+|+.++.+
T Consensus      1786 ~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A         1786 LKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp             GGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred             ccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECCCc
Confidence            88999999876655445566667777777788889999999999999999999999999999999999999764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.93  E-value=2.1e-25  Score=184.17  Aligned_cols=191  Identities=27%  Similarity=0.366  Sum_probs=147.0

Q ss_pred             cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC
Q 019196          113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  192 (344)
Q Consensus       113 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~  192 (344)
                      +++|+++++++||+++++++|||+++.+.++++++++|||+|++|++|++++++++..|++|+++++++++.+.++++|+
T Consensus         5 ~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~   84 (198)
T 1pqw_A            5 VPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV   84 (198)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC
T ss_pred             eECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence            68899999999999999999999999778899999999999998999999999999999999999999998888999999


Q ss_pred             cEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEE
Q 019196          193 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHG  271 (344)
Q Consensus       193 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~  271 (344)
                      +.++++.+.+.   .+.+.+.+.+.++|++|||+|.+.+..++++++++|+++.+|..... ...++. ..+.+++++.+
T Consensus        85 ~~~~d~~~~~~---~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~  160 (198)
T 1pqw_A           85 EYVGDSRSVDF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGL-AALAKSASFSV  160 (198)
T ss_dssp             SEEEETTCSTH---HHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEG-GGGTTTCEEEE
T ss_pred             CEEeeCCcHHH---HHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCCh-hHhcCCcEEEE
Confidence            98888877665   45555666566899999999988889999999999999999976532 111222 23568888887


Q ss_pred             EEecccccc-CchhHHHHHHHHHHHHHCCceeEeeeee
Q 019196          272 LYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHT  308 (344)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~i~~~~~~~  308 (344)
                      +.. .+... .+....+.++++++++++|++++.+..+
T Consensus       161 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          161 VDL-DLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             CCH-HHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             Eeh-HHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            544 22111 3334467899999999999999765444

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=99.02  E-value=1.1e-09  Score=98.11  Aligned_cols=142  Identities=17%  Similarity=0.164  Sum_probs=98.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++++++..  +++.+..+    ..+.   .  .++|+|||
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~---~--~~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAE----IETA---V--AEADLLIG  236 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHH----HHHH---H--HTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHH----HHHH---H--cCCCEEEE
Confidence            389999999 99999999999999999999999999999888766443  33322111    2221   1  26999999


Q ss_pred             CCChhh-------HHHHHhcccCCCEEEEEeccCCC------CCCcchhhhhccceEEEEEEeccccccCc----hh-HH
Q 019196          225 PVGGKL-------TKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRP----HV-LE  286 (344)
Q Consensus       225 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~  286 (344)
                      |++.+.       ....+..++++|+++.++...+.      ...++...+..+++++.+...  +....+    .. ..
T Consensus       237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~--lp~~~~~~~s~~~~~  314 (361)
T 1pjc_A          237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPN--MPGAVPWTATQALNN  314 (361)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSC--GGGGCHHHHHHHHHH
T ss_pred             CCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCC--cchhhHHHHHHHHHH
Confidence            997643       56788999999999999876532      122333345677888776542  111111    11 24


Q ss_pred             HHHHHHHHHHHCCc
Q 019196          287 DSLRELLLWAAKGL  300 (344)
Q Consensus       287 ~~~~~~~~~l~~g~  300 (344)
                      ..+..+++++.+|.
T Consensus       315 ~~~~~l~~l~~~G~  328 (361)
T 1pjc_A          315 STLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHhCCc
Confidence            56778888888773

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.85  E-value=3.1e-08  Score=88.92  Aligned_cols=144  Identities=22%  Similarity=0.296  Sum_probs=92.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++ +|.....+..+.   +.+.+..     .++|++++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~---~~l~~~~-----~~~DvVi~  235 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE---ANIKKSV-----QHADLLIG  235 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH---HHHHHHH-----HHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH---HHHHHHH-----hCCCEEEE
Confidence            3589999999 999999999999999999999999998887765 776533332221   1122222     26899999


Q ss_pred             CCChhh-------HHHHHhcccCCCEEEEEeccCCC------CCCcchhhhhccceEEEEEEeccccccCch-----hHH
Q 019196          225 PVGGKL-------TKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYKIHRPH-----VLE  286 (344)
Q Consensus       225 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  286 (344)
                      |++.+.       ....+..|+++|+++.++...+.      ....+...+..+++++.+...  +....|.     ...
T Consensus       236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~--lp~~~p~~as~~~~~  313 (369)
T 2eez_A          236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVAN--MPGAVPRTSTFALTN  313 (369)
T ss_dssp             CCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSC--SGGGSHHHHHHHHHH
T ss_pred             CCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCC--cchhcHHHHHHHHHH
Confidence            998642       57788999999999999876532      111222234567777776542  1112222     124


Q ss_pred             HHHHHHHHHHHCCc
Q 019196          287 DSLRELLLWAAKGL  300 (344)
Q Consensus       287 ~~~~~~~~~l~~g~  300 (344)
                      ..++.+++++.+|.
T Consensus       314 ~~~~~l~~l~~~g~  327 (369)
T 2eez_A          314 QTLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCh
Confidence            56777888887764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.82  E-value=4.4e-11  Score=108.70  Aligned_cols=168  Identities=18%  Similarity=0.247  Sum_probs=121.3

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEE------Ee---cCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHH
Q 019196           70 VPGSDYSGTVDAVGPNVSNFKVGDTVC------GF---AALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVA  137 (344)
Q Consensus        70 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~------~~---~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~  137 (344)
                      ..|++.++.|.++|+++.++.+|+.++      ++   ...|++++++..+.   +.+|++++.+.++. ..+..++|.+
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~a  154 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAA  154 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHH
Confidence            478899999999999999999999862      11   12366777776555   77888887777654 3566788877


Q ss_pred             HHHhcCC---CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHH-HHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019196          138 LVHRAQL---SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       138 l~~~~~~---~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      +......   .++++|+|+|+ |++|.++++.++..|+ +|++++++.++. ++++++|++ ++++.  +    ..+.. 
T Consensus       155 v~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--~----l~~~l-  225 (404)
T 1gpj_A          155 VELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD--E----LVDHL-  225 (404)
T ss_dssp             HHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--G----HHHHH-
T ss_pred             HHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHH--h----HHHHh-
Confidence            6432212   47899999999 9999999999999999 999999999886 677888875 32221  1    22222 


Q ss_pred             HhcCCCccEEEeCCChhh--H-HHHHhc--c--cCCCEEEEEeccC
Q 019196          213 ARKLKGVDVLYDPVGGKL--T-KESLKL--L--NWGAQILVIGFAS  251 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~~--~-~~~~~~--l--~~~G~~v~~g~~~  251 (344)
                          .++|+|++|++...  . ...+..  +  +++|.++.++...
T Consensus       226 ----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          226 ----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             ----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             ----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence                36999999998632  1 244554  3  5677777777654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.78  E-value=1.6e-08  Score=91.26  Aligned_cols=125  Identities=25%  Similarity=0.334  Sum_probs=86.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-EeCCC---------------CC-chhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSN---------------ES-VIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~---------------~~-~~~~~~  208 (344)
                      ++++|+|+|+ |.+|+.++++++.+|++|+++++++++.+.++++|++.+ ++..+               .+ ......
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            5889999998 999999999999999999999999998888888997644 12211               00 000011


Q ss_pred             HHHHHhcCCCccEEEeCC---Chh---h-HHHHHhcccCCCEEEEEeccCCC-CC-CcchhhhhccceEEEEEE
Q 019196          209 EFLKARKLKGVDVLYDPV---GGK---L-TKESLKLLNWGAQILVIGFASGE-IP-VIPANIALVKNWTVHGLY  273 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~  273 (344)
                      .+.+..  .++|+||+|+   |.+   . ....++.|++++.++.++...+. .. ..+...+..+++++.++.
T Consensus       250 ~l~~~~--~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~  321 (384)
T 1l7d_A          250 AVLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHT  321 (384)
T ss_dssp             HHHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCS
T ss_pred             HHHHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeC
Confidence            132333  3699999999   532   2 37788999999999999865432 21 123334556778887754

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.78  E-value=3.5e-08  Score=88.73  Aligned_cols=143  Identities=17%  Similarity=0.170  Sum_probs=94.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++++|+|+|+ |++|+.+++.++.+|++|+++++++++.+.+++ +|+....+....   ..+.+..     .++|+|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~l-----~~aDvVi~  237 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGAV-----KRADLVIG  237 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHHH-----HHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHHH-----cCCCEEEE
Confidence            4789999999 999999999999999999999999998888876 676532222111   1122222     26899999


Q ss_pred             CCChhh-------HHHHHhcccCCCEEEEEeccCC------CCCCcchhhhhccceEEEEEEeccccccCchh-----HH
Q 019196          225 PVGGKL-------TKESLKLLNWGAQILVIGFASG------EIPVIPANIALVKNWTVHGLYWGSYKIHRPHV-----LE  286 (344)
Q Consensus       225 ~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  286 (344)
                      |++.+.       ....+..|+++|.++.++...+      .....+...+..+++++.+...  +....+..     ..
T Consensus       238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~ph--l~~~~~~~as~~~~~  315 (377)
T 2vhw_A          238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVAN--MPASVPKTSTYALTN  315 (377)
T ss_dssp             CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTT--GGGGSHHHHHHHHHH
T ss_pred             CCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCC--cchhhHHHHHHHHHH
Confidence            997543       5778899999999999986543      1111222234456666654432  11112221     12


Q ss_pred             HHHHHHHHHHHCC
Q 019196          287 DSLRELLLWAAKG  299 (344)
Q Consensus       287 ~~~~~~~~~l~~g  299 (344)
                      ..+..+++++.+|
T Consensus       316 ~~~~~~~~l~~~g  328 (377)
T 2vhw_A          316 ATMPYVLELADHG  328 (377)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC
Confidence            3456666666665

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.60  E-value=6.9e-08  Score=87.33  Aligned_cols=124  Identities=22%  Similarity=0.305  Sum_probs=84.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCC-------Cc----hhh-----HHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE-------SV----IPS-----VKE  209 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-------~~----~~~-----~~~  209 (344)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++++++.++.+.++++|+..+ ..+..       .+    .+.     ...
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFL-ELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEEC-CC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEE-EecccccccccccchhhccHHHHHHHHHH
Confidence            4789999999 999999999999999999999999999888899987643 11110       00    000     011


Q ss_pred             HHHHhcCCCccEEEeCCCh------hhH-HHHHhcccCCCEEEEEeccCCC-CCCc-chh-hhhccceEEEEEE
Q 019196          210 FLKARKLKGVDVLYDPVGG------KLT-KESLKLLNWGAQILVIGFASGE-IPVI-PAN-IALVKNWTVHGLY  273 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~------~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~-~~~-~~~~~~~~~~~~~  273 (344)
                      +.+..  .++|+||+|++.      ..+ ...++.|++++.++.++...+. .... +.. .+..+++++.|..
T Consensus       249 l~e~~--~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          249 FAAQA--KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH--HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            22222  258999999522      123 6788999999999999975332 2211 111 2457888888754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.52  E-value=4e-07  Score=83.89  Aligned_cols=156  Identities=21%  Similarity=0.211  Sum_probs=104.9

Q ss_pred             CCcccCcceeEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEeecccCCCCCCCHHHHh--hccchHHHHHHHHHHhcC-
Q 019196           67 LPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQFPVPKGCDLLAAA--ALPVAFGTSHVALVHRAQ-  143 (344)
Q Consensus        67 ~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~P~~~~~~~aa--~l~~~~~ta~~~l~~~~~-  143 (344)
                      +|.++ .++.|+|+++|.++.++.      .....|.+......    ..+  +..+..  .++....++|+++.+... 
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~~----vn~--sVae~~~r~l~~~~~s~~~g~~r~~~~  270 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAIN----VND--SVTKSKFDNKYGTRHSLIDGINRGTDA  270 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEEE----CTT--SHHHHTTHHHHHHHHHHHHHHHHHHCC
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHHHcCCEEEecCC----ccH--HHHHHHHhhhhhhhhhhhHHHHhccCC
Confidence            34445 789999999998877651      11111222111110    111  222211  112334556666643322 


Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      ..++++|+|+|. |.+|..+++.++.+|++|+++++++++.+.++++|++ +.     +    ..+..     .++|+|+
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~-----~----l~e~l-----~~aDvVi  334 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VV-----T----VEEAI-----GDADIVV  334 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----C----HHHHG-----GGCSEEE
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Ee-----c----HHHHH-----hCCCEEE
Confidence            678999999999 9999999999999999999999999988888899985 21     1    22221     3689999


Q ss_pred             eCCChh-hHH-HHHhcccCCCEEEEEeccC
Q 019196          224 DPVGGK-LTK-ESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       224 d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|++.. .+. ..++.|+++|+++.+|...
T Consensus       335 ~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          335 TATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             ECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             ECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            999874 344 7889999999999998654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.36  E-value=3.4e-06  Score=71.90  Aligned_cols=176  Identities=16%  Similarity=0.194  Sum_probs=104.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+.+||+|+++++|.+.++.+...|++|++++++.++.+.+ +++|.....-.-+..-.+.++++.+..  ..+++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999999999887655 567644332212222222233333322  12469999


Q ss_pred             EeCCChh--------------------------hHHHHHhcccCCCEEEEEeccCCCCCCcch-h---------------
Q 019196          223 YDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPA-N---------------  260 (344)
Q Consensus       223 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~---------------  260 (344)
                      +|++|..                          ..+.++..|+++|+++.++...+....... .               
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~l  187 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNW  187 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            9998841                          125667789999999998865543221111 1               


Q ss_pred             --hhhccceEEEEEEeccccccC----chhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 --IALVKNWTVHGLYWGSYKIHR----PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 --~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                        ++-.+++++.....+......    ........+...+.+.+.   .+....-..+|+.++..+|.+.
T Consensus       188 A~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~PlgR~g~peeiA~~v~FLaSd  254 (273)
T 4fgs_A          188 ILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQ---VPMGRVGRAEEVAAAALFLASD  254 (273)
T ss_dssp             HHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHH---STTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCc
Confidence              124567888877765432110    000011112222222110   1111223578899998888754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.34  E-value=2.7e-06  Score=75.41  Aligned_cols=104  Identities=19%  Similarity=0.224  Sum_probs=76.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC-----CCCch---------hhHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS-----NESVI---------PSVKEFL  211 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~-----~~~~~---------~~~~~~~  211 (344)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++.++++++++.++++|++.+ +..     ...+.         .....+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence            5789999999 999999999999999999999999999999999987532 110     00110         1112222


Q ss_pred             HHhcCCCccEEEeCCCh-----h--hHHHHHhcccCCCEEEEEeccCCC
Q 019196          212 KARKLKGVDVLYDPVGG-----K--LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      +..  ..+|+||.|+..     +  .....++.|++++.++.++...+.
T Consensus       261 e~l--~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG  307 (381)
T 3p2y_A          261 DAI--TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG  307 (381)
T ss_dssp             HHH--TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred             HHH--hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC
Confidence            222  479999999732     1  237899999999999999876543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.28  E-value=4.1e-06  Score=74.95  Aligned_cols=124  Identities=17%  Similarity=0.226  Sum_probs=83.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC---------CCch---------hhH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN---------ESVI---------PSV  207 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---------~~~~---------~~~  207 (344)
                      ++.+|+|+|+ |.+|+.++++++.+|++|++.++++++++.++++|++.+ ....         ..+.         ...
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~-~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFI-AVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEEC-CCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCcee-ecccccccccccccchhhhcchhhhhhhH
Confidence            5689999999 999999999999999999999999999999999987532 1100         0010         001


Q ss_pred             HHHHHHhcCCCccEEEeCCCh-----h--hHHHHHhcccCCCEEEEEeccCCC-CCC-cchhhhhccceEEEEEE
Q 019196          208 KEFLKARKLKGVDVLYDPVGG-----K--LTKESLKLLNWGAQILVIGFASGE-IPV-IPANIALVKNWTVHGLY  273 (344)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~  273 (344)
                      ..+.+..  .++|+||.|+..     +  ..+..++.|++++.++.++...+. ... .+...+..+++++++..
T Consensus       267 ~~l~e~l--~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          267 ALVAEHI--AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH--HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             hHHHHHh--cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence            1222222  368999999642     1  237899999999999999865432 211 12222335666666654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.23  E-value=1.1e-06  Score=67.57  Aligned_cols=107  Identities=12%  Similarity=0.175  Sum_probs=74.7

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHH-HHhcCCcEEEeCCCCCchhhHH
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LKSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      +.+++++++. .+....+++|+|+|+ |.+|...++.++..|++|++.+++.++.+. +++++... ....+      ..
T Consensus         5 ~~sv~~~a~~-~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~~------~~   75 (144)
T 3oj0_A            5 KVSIPSIVYD-IVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLIND------ID   75 (144)
T ss_dssp             CCSHHHHHHH-HHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECSC------HH
T ss_pred             cccHHHHHHH-HHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-EeecC------HH
Confidence            3456666663 333345889999998 999999999988889999999999888765 56777532 22221      22


Q ss_pred             HHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          209 EFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      +..     .++|+|++|++.........++++++.++.++.+
T Consensus        76 ~~~-----~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           76 SLI-----KNNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             HHH-----HTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             HHh-----cCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            222     2589999999874322223778888899888754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.14  E-value=4.5e-05  Score=64.30  Aligned_cols=172  Identities=17%  Similarity=0.079  Sum_probs=101.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+.+||+|+++++|.+.++.+...|++|++++++.++.+..    ++.|.+...-.-+..-.+.++++.+..  ..+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            578999999999999999999999999999999998876544    344544433222322223344443322  23579


Q ss_pred             cEEEeCCChh--------------------------hHHHHHhcc---cCCCEEEEEeccCCCCCCcc-hh---------
Q 019196          220 DVLYDPVGGK--------------------------LTKESLKLL---NWGAQILVIGFASGEIPVIP-AN---------  260 (344)
Q Consensus       220 d~vid~~g~~--------------------------~~~~~~~~l---~~~G~~v~~g~~~~~~~~~~-~~---------  260 (344)
                      |+++|++|..                          ..+.++..|   ..+|+++.++...+...... ..         
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  167 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIK  167 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHH
Confidence            9999999841                          124455555   24689999986654322111 11         


Q ss_pred             --------hhhccceEEEEEEeccccccCchhH---HHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 --------IALVKNWTVHGLYWGSYKIHRPHVL---EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 --------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                              ++-..++++.....+..........   ++..+.+.+.+       +....-..+|+.++..+|.+.
T Consensus       168 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~-------Pl~R~g~pediA~~v~fL~S~  235 (255)
T 4g81_D          168 MLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSST-------PSQRWGRPEELIGTAIFLSSK  235 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHS-------TTCSCBCGGGGHHHHHHHHSG
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCC-------CCCCCcCHHHHHHHHHHHhCc
Confidence                    1245678888777665432211110   11111111111       111223567888888888753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.07  E-value=2.5e-05  Score=66.14  Aligned_cols=106  Identities=19%  Similarity=0.275  Sum_probs=71.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++... .+..+-.+. +.++++.+..  ...++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADL-NEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999999988776553 444332 222222222 2233222211  1247999


Q ss_pred             EEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          222 LYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       222 vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++++|..                          ..+.++..++++|+++.++....
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            99998731                          12345566777899999986554

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.03  E-value=4.3e-05  Score=65.51  Aligned_cols=101  Identities=15%  Similarity=0.256  Sum_probs=73.1

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ..++++++++||.+|+ |..|+.+..+++..|++|++++.+++..+.+++    .|.+.+ .....+..    ++    .
T Consensus       116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gDa~----~l----~  185 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGDET----VI----D  185 (298)
T ss_dssp             HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESCGG----GG----G
T ss_pred             HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECchh----hC----C
Confidence            4578899999999998 776777777888889999999999998888764    354221 11111221    11    1


Q ss_pred             CCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEecc
Q 019196          216 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       216 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ...||+|+.+...    ..++.+.+.|+|+|+++.....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            3679999976543    3578899999999999987643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.02  E-value=3.9e-05  Score=64.37  Aligned_cols=181  Identities=13%  Similarity=0.056  Sum_probs=102.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vid  224 (344)
                      +++|||+|+++++|.+.++.+...|++|+++++++++.+.+.+.+.+...-.-+..-.+.++++.+..  ..+++|+++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999999998887777654433322212222222233333221  1247999999


Q ss_pred             CCChh-----------h---------------HHHHHhcc-cCCCEEEEEeccCCCCCCcc-hhhh--------------
Q 019196          225 PVGGK-----------L---------------TKESLKLL-NWGAQILVIGFASGEIPVIP-ANIA--------------  262 (344)
Q Consensus       225 ~~g~~-----------~---------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~-~~~~--------------  262 (344)
                      ++|..           .               .+.++..| +.+|+++.++...+...... ..+.              
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA  161 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALA  161 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            98731           1               13333333 45799999886654322111 1110              


Q ss_pred             --hccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCcceeEEEEecCC
Q 019196          263 --LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM  337 (344)
Q Consensus       263 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~~gkvvi~~~~~  337 (344)
                        +.+++++.....+.......   .+..++..+.+       +....-..+|+.++..+|.+....--.++.+|.-
T Consensus       162 ~ela~~IrVN~I~PG~i~t~~~---~~~~~~~~~~~-------Pl~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          162 MSLGPDVLVNCIAPGWINVTEQ---QEFTQEDCAAI-------PAGKVGTPKDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             HHHTTTSEEEEEEECSBCCCC------CCHHHHHTS-------TTSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HHHCCCCEEEEEecCcCCCCCc---HHHHHHHHhcC-------CCCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence              23467777666554322211   11122221111       1222235788999888887655332334555543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.00  E-value=9.3e-05  Score=54.23  Aligned_cols=93  Identities=19%  Similarity=0.194  Sum_probs=63.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+...+... +..+-.+    ...+.+..  .++|+||+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~----~~~~~~~~--~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVAT-KQVDAKD----EAGLAKAL--GGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEE-EECCTTC----HHHHHHHT--TTCSEEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcE-EEecCCC----HHHHHHHH--cCCCEEEE
Confidence            3468999999 999999999999999 79999999999888777666543 2222222    12233332  37999999


Q ss_pred             CCChhhHHHHHh-cccCCCEEEE
Q 019196          225 PVGGKLTKESLK-LLNWGAQILV  246 (344)
Q Consensus       225 ~~g~~~~~~~~~-~l~~~G~~v~  246 (344)
                      |++......... +.+.+-.++.
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEEC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEE
Confidence            998654444443 3344444443

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.98  E-value=0.0001  Score=66.11  Aligned_cols=102  Identities=19%  Similarity=0.240  Sum_probs=76.7

Q ss_pred             HHHHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          135 HVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       135 ~~~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.++.+... .-.|++|+|.|. |.+|..+++.++..|++|+++++++.+...+...|+.. .     +    +++..  
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~-----~----Leeal--  273 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-V-----K----LNEVI--  273 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C-----C----HHHHT--
T ss_pred             HHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-c-----c----HHHHH--
Confidence            444444333 447899999999 99999999999999999999999987776677777532 1     1    22221  


Q ss_pred             hcCCCccEEEeCCChh-hH-HHHHhcccCCCEEEEEeccCC
Q 019196          214 RKLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       214 ~~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~  252 (344)
                         ...|+++.|.+.. .+ ...+..|++++.++.+|....
T Consensus       274 ---~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          274 ---RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             ---hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence               3689999998753 34 478999999999999886543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.96  E-value=6.3e-05  Score=64.07  Aligned_cols=83  Identities=30%  Similarity=0.404  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++....+-.-+....+.++++.+..  ...++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999999999998876655 455644332212222222233333221  12479999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.96  E-value=0.0015  Score=55.87  Aligned_cols=79  Identities=29%  Similarity=0.287  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh-cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR-KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~~d~v  222 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+ ++++... .+..+-.+ .+.+.++.+.. ...++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCeE
Confidence            467899999999999999999988999999999998877655 4555433 22222222 22344444332 23478999


Q ss_pred             EeC
Q 019196          223 YDP  225 (344)
Q Consensus       223 id~  225 (344)
                      +++
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            988

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.95  E-value=9.9e-05  Score=63.45  Aligned_cols=106  Identities=22%  Similarity=0.342  Sum_probs=67.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHH----HHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKF----LKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~----~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++ .+.    +++.+.... +..+-.+. +.+.+..+..  ...
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV-EDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999987643 222    234454322 22222221 2222222211  113


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                          ..+.++..++..|+++.++...+
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            699999998731                          11445566667899999986544

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.94  E-value=7.3e-05  Score=62.97  Aligned_cols=173  Identities=16%  Similarity=0.164  Sum_probs=100.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+.+||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.|.+...-.-+..-.+.++++.+..  ..+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999998876544    345654333222222222233333322  12479


Q ss_pred             cEEEeCCCh--h-------------------------hHHHHHhccc--CCCEEEEEeccCCCCCCcch-h---------
Q 019196          220 DVLYDPVGG--K-------------------------LTKESLKLLN--WGAQILVIGFASGEIPVIPA-N---------  260 (344)
Q Consensus       220 d~vid~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~-~---------  260 (344)
                      |+++|++|.  .                         ..+.++..|.  .+|++|.++...+....... .         
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~  165 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLI  165 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHH
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHH
Confidence            999999872  1                         0144455553  46899999866543221111 1         


Q ss_pred             --------hhhccceEEEEEEecccccc----CchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 --------IALVKNWTVHGLYWGSYKIH----RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 --------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                              ++-.+++++.....+.....    .........+...+..      ++....-..+|+.++..+|.+.
T Consensus       166 ~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~------~~~~R~g~pediA~~v~fLaSd  235 (254)
T 4fn4_A          166 GLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM------SLSSRLAEPEDIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH------TTCCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC------CCCCCCcCHHHHHHHHHHHhCc
Confidence                    12466788887776543211    0000012222222221      1111223578898888888753

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.94  E-value=2.7e-05  Score=60.50  Aligned_cols=81  Identities=12%  Similarity=0.236  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ...++.+|+|+|+ |.+|..+++.++..|++|+++++++++.+.++ +.|.. ++..+..+    .. .+......++|+
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~----~~-~l~~~~~~~ad~   87 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAE----FE-TLKECGMEKADM   87 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTS----HH-HHHTTTGGGCSE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCC----HH-HHHHcCcccCCE
Confidence            3456789999998 99999999999999999999999988877776 56654 33333222    11 222222357999


Q ss_pred             EEeCCChhh
Q 019196          222 LYDPVGGKL  230 (344)
Q Consensus       222 vid~~g~~~  230 (344)
                      ||.|++.+.
T Consensus        88 Vi~~~~~~~   96 (155)
T 2g1u_A           88 VFAFTNDDS   96 (155)
T ss_dssp             EEECSSCHH
T ss_pred             EEEEeCCcH
Confidence            999999743

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.92  E-value=6.4e-05  Score=65.00  Aligned_cols=92  Identities=20%  Similarity=0.289  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|+|+|. |.+|..+++.++..|++|++.+++.++.+.++++|+.. ++..      ...+..     ...|+|++|
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~~------~l~~~l-----~~aDvVi~~  220 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHIS------KAAQEL-----RDVDVCINT  220 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEGG------GHHHHT-----TTCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cChh------hHHHHh-----cCCCEEEEC
Confidence            6789999998 99999999999999999999999988777777788653 2211      122221     468999999


Q ss_pred             CChhhH-HHHHhcccCCCEEEEEecc
Q 019196          226 VGGKLT-KESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       226 ~g~~~~-~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++...+ ...+..+++++.++.++..
T Consensus       221 ~p~~~i~~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             CSSCCBCHHHHHHSCTTCEEEECSST
T ss_pred             CChHHhCHHHHHhcCCCCEEEEecCC
Confidence            986443 4577889999999998753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.88  E-value=9.3e-05  Score=62.26  Aligned_cols=82  Identities=22%  Similarity=0.349  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++++|||+|++|++|..++..+...|++|++++++.++.+.+. ++.....+...+....+.+.++.+..  .++|+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            46789999999999999999999999999999999988776653 44433333322322323344444332  4699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        90 ~~Ag~   94 (249)
T 3f9i_A           90 CNAGI   94 (249)
T ss_dssp             ECCC-
T ss_pred             ECCCC
Confidence            99883

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.85  E-value=0.00024  Score=60.08  Aligned_cols=171  Identities=16%  Similarity=0.174  Sum_probs=98.9

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCC--cEEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--DHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.++++..+.+.    +++.  ...+..+-.+. +.++++.+..  .
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSD-EEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            578999999865  8999999999999999999999877655543    3342  22332322222 2233322211  1


Q ss_pred             CCCccEEEeCCCh----h-----------hH---------------HHHHhcccCCCEEEEEeccCCCCCCcch------
Q 019196          216 LKGVDVLYDPVGG----K-----------LT---------------KESLKLLNWGAQILVIGFASGEIPVIPA------  259 (344)
Q Consensus       216 ~~~~d~vid~~g~----~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~~~~~~~~------  259 (344)
                      .+++|++++++|.    +           .+               ......++++|+++.++...+.......      
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  163 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVA  163 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHH
Confidence            2479999999872    0           01               2234567889999999876543222111      


Q ss_pred             ------------hhhhccceEEEEEEeccccccCc---hhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          260 ------------NIALVKNWTVHGLYWGSYKIHRP---HVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       260 ------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                                  .++-.+++++.....+.......   ....+.++.+.+...-+       ..-..+|+.++..+|.+.
T Consensus       164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~-------R~g~peevA~~v~fL~Sd  236 (256)
T 4fs3_A          164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK-------RNVDQVEVGKTAAYLLSD  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS-------SCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC-------CCcCHHHHHHHHHHHhCc
Confidence                        11345678888777654322111   11123333333322111       223577888888888753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.84  E-value=0.00013  Score=63.37  Aligned_cols=92  Identities=20%  Similarity=0.283  Sum_probs=71.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|+|+|+ |.+|..+++.++..|++|++.+++.++.+.++++|.. .++..  +    ..+.   .  ...|+|+.+
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~~--~----l~~~---l--~~aDvVi~~  222 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHTD--E----LKEH---V--KDIDICINT  222 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEGG--G----HHHH---S--TTCSEEEEC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEchh--h----HHHH---h--hCCCEEEEC
Confidence            5789999999 9999999999999999999999998877777777764 22211  1    2222   1  468999999


Q ss_pred             CChhhH-HHHHhcccCCCEEEEEecc
Q 019196          226 VGGKLT-KESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       226 ~g~~~~-~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++...+ ...+..+++++.++.++..
T Consensus       223 ~p~~~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CSSCCBCHHHHTTSCTTCEEEECSST
T ss_pred             CChhhhCHHHHHhCCCCCEEEEEeCC
Confidence            987544 4577899999999998754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.83  E-value=0.00023  Score=60.50  Aligned_cols=106  Identities=23%  Similarity=0.329  Sum_probs=68.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.. ..+..+-.+. +.++++.+..  ...++|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH-HHHHHHHHHHHHHcCCCcE
Confidence            467899999999999999999999999999999998876655 344422 2222222221 2233322211  1246899


Q ss_pred             EEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          222 LYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       222 vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++++|..                          ..+.++..++..|+++.++....
T Consensus        84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            99998731                          01233444544799999886554

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.83  E-value=0.0001  Score=62.02  Aligned_cols=83  Identities=30%  Similarity=0.286  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++.....-.-+....+.++++.+..  ...++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            468999999999999999999999999999999998876655 455544333222222222233332221  12369999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999983

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.83  E-value=0.00018  Score=61.30  Aligned_cols=105  Identities=21%  Similarity=0.364  Sum_probs=67.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|++++++ .++.+.+    ++.+.... +..+-.+. +.+.++.+..  ...
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV-PEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999987654 3333322    34454332 22222222 2233332221  123


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++++++|..                          ..+.++..++++|+++.++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            699999998831                          1245667788899999998755

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.83  E-value=0.00015  Score=59.77  Aligned_cols=99  Identities=15%  Similarity=0.076  Sum_probs=65.2

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCHH-HHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAE-KIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~-~~g~~v~~~~~~~~-~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++|||+|++|++|..+++.+. ..|++|++++++++ +.+.+...+. ...+..+-.+    .+.+....  .++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d----~~~~~~~~--~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN----PGXLEQAV--TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC----HHHHHHHH--TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC----HHHHHHHH--cCCCEEEE
Confidence            469999999999999998887 89999999999987 6655532222 2233332222    22233333  36899999


Q ss_pred             CCChhh--HHHHHhcccCC--CEEEEEeccCC
Q 019196          225 PVGGKL--TKESLKLLNWG--AQILVIGFASG  252 (344)
Q Consensus       225 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~  252 (344)
                      ++|...  ...++..++..  |+++.++....
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            998521  34455555433  58998876543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.83  E-value=0.00011  Score=63.44  Aligned_cols=81  Identities=23%  Similarity=0.304  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++....+..-+..-.+.+.++.+..  .++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            4789999999999999999999999999999999988776664 44433222222222223344444433  47999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      ++|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9883

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.83  E-value=0.00018  Score=62.53  Aligned_cols=83  Identities=14%  Similarity=0.191  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hcCC-c-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SLGV-D-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~-~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ +   +.+. . ..+..+-.+..+.++.+.+..  ...
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            468999999999999999999988999999999998765443 2   2222 1 222222222212233332221  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus        91 ~iD~lv~nAg~  101 (311)
T 3o26_A           91 KLDILVNNAGV  101 (311)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999983

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.82  E-value=0.00021  Score=61.71  Aligned_cols=105  Identities=22%  Similarity=0.257  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++ .+.+    ++.+.... +..+-.+. +.++++.+..  ...
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE-QHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999987653 2222    33444332 22222221 2233322211  123


Q ss_pred             CccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++++++|..                           ..+.++..++++|+++.++...
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            699999997631                           1244556778889999987543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.81  E-value=0.00031  Score=59.96  Aligned_cols=105  Identities=22%  Similarity=0.358  Sum_probs=67.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|++++++. ++.+.+    ++.+.... +..+-.+. +.++++.+..  ...
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA-EAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999886543 433332    33454332 22222222 2233332211  123


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++++++|..                          ..+.++..++++|+++.++...
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            699999998731                          1244556777899999987643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.79  E-value=0.00011  Score=62.59  Aligned_cols=105  Identities=17%  Similarity=0.277  Sum_probs=66.3

Q ss_pred             CCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCHHH-HHHH-HhcCCc-EEEeCCCCCchhhHHHHHH----Hhc-
Q 019196          146 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEK-IKFL-KSLGVD-HVVDLSNESVIPSVKEFLK----ARK-  215 (344)
Q Consensus       146 ~~~~vlI~g~--~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~----~~~-  215 (344)
                      .++++||+|+  +|++|..+++.+...|++|++++++.++ .+.+ ++++.. ..+..+-.+. +.++++.+    ..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE-EHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCH-HHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            4688999998  8999999999999999999999988765 2433 344422 1222222221 22333322    221 


Q ss_pred             CCCccEEEeCCChh-------------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          216 LKGVDVLYDPVGGK-------------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       216 ~~~~d~vid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +.++|++++|+|..                               ..+.++..++++|+++.++...
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~  151 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP  151 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCC
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcc
Confidence            12799999998721                               0133445566679999987554

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.78  E-value=0.00021  Score=61.22  Aligned_cols=101  Identities=17%  Similarity=0.259  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .....+.++.+||-.|+ |. |..+..+++..  +.+|++++.+++..+.+++    .+...-+.....+..+.      
T Consensus       105 ~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------  176 (277)
T 1o54_A          105 AMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG------  176 (277)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC------
T ss_pred             HHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc------
Confidence            35677889999999997 44 88888999885  5699999999988777754    34311111112222110      


Q ss_pred             HhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||+|+...+.  ..+..+.+.|+++|.++...
T Consensus       177 -~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          177 -FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             -CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence             123469999976654  56788899999999998864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.78  E-value=0.00032  Score=60.24  Aligned_cols=104  Identities=22%  Similarity=0.238  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------HHHHHHH----HhcCCcEE-EeCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHV-VDLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+.+    +..+.... +..+-.+. +.+.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR-AAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH-HHHH
Confidence            46899999999999999999999999999999876            4443333    33443322 22222221 2233


Q ss_pred             HHHHHh--cCCCccEEEeCCChh------------------------hHHHHHhcccCCCEEEEEecc
Q 019196          209 EFLKAR--KLKGVDVLYDPVGGK------------------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++.+..  ...++|++++++|..                        ..+.++..++++|+++.++..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            322211  123699999998731                        124455677788999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.77  E-value=0.00018  Score=65.82  Aligned_cols=98  Identities=23%  Similarity=0.322  Sum_probs=73.9

Q ss_pred             HHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          137 ALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       137 ~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ++.+.... -.|++++|+|+ |++|..+++.++..|++|+++++++++...+...|++ +.+.  .+            .
T Consensus       254 gi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l--ee------------~  317 (488)
T 3ond_A          254 GLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL--ED------------V  317 (488)
T ss_dssp             HHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG--GG------------T
T ss_pred             HHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH--HH------------H
Confidence            33333333 37899999999 8999999999999999999999998887777777753 2111  11            1


Q ss_pred             CCCccEEEeCCChh-hH-HHHHhcccCCCEEEEEecc
Q 019196          216 LKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       216 ~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  250 (344)
                      ...+|+++++.|.. .+ ...+..+++++.++.+|..
T Consensus       318 ~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          318 VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            24689999999863 33 5588999999999988854

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.77  E-value=9.7e-05  Score=66.43  Aligned_cols=92  Identities=18%  Similarity=0.202  Sum_probs=72.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .-.|++|+|+|. |.+|..+++.++.+|++|+++++++.+...+...|+.. .+         .+++.     ...|+|+
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~---------LeElL-----~~ADIVv  307 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VT---------LDDAA-----STADIVV  307 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CC---------HHHHG-----GGCSEEE
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-cc---------HHHHH-----hhCCEEE
Confidence            457899999999 99999999999999999999999887666666667532 11         22322     3589999


Q ss_pred             eCCChh-hH-HHHHhcccCCCEEEEEeccC
Q 019196          224 DPVGGK-LT-KESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       224 d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .|++.. .+ ...+..|++++.++.+|...
T Consensus       308 ~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          308 TTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             ECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             ECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            998864 33 67889999999999887544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.76  E-value=0.00016  Score=61.61  Aligned_cols=104  Identities=20%  Similarity=0.274  Sum_probs=65.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+.. .|++|++++++.++.+.+    +..+.. ..+..+-.+. +.+.++.+..  ...
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            467899999999999999988887 899999999987765443    222322 2333322222 2223222211  113


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++|++|+|+|..                          .++.++..+++.|+++.++..
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~  140 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  140 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECCh
Confidence            699999998731                          012344455567899988754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.73  E-value=0.00017  Score=61.12  Aligned_cols=81  Identities=25%  Similarity=0.339  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+. +.++++.+..  ...++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKE-ADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            467899999999999999999999999999999998877655 3455332 222222222 2233332221  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.73  E-value=0.00017  Score=61.06  Aligned_cols=82  Identities=22%  Similarity=0.295  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+. +.+.++.+..  ...++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQ-DSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999989999999999998876655 4455332 222222222 2233322211  2247999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.73  E-value=0.00017  Score=61.84  Aligned_cols=81  Identities=21%  Similarity=0.339  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+ ++++.... +..+-.+. +.++++.+..  ...++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSA-KDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999998876655 34554322 22222221 2233332221  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus       105 lv~nAg  110 (277)
T 4dqx_A          105 LVNNAG  110 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.72  E-value=0.00016  Score=61.45  Aligned_cols=83  Identities=28%  Similarity=0.386  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|++|++|.++++.+...|++|++++++.++.+.+.    +.+....+..-+..-.+.++++.+..  ..+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999988765542    23433222111221222233332221  12469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.72  E-value=0.0005  Score=59.39  Aligned_cols=107  Identities=24%  Similarity=0.262  Sum_probs=68.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..++..+...|++|++++++.+  +.+.+    ++.+....+-.-+....+.++++.+..  ...
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999887632  22222    344544333222222222233333221  124


Q ss_pred             CccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                           ..+.++..++++|+++.++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence            799999998731                           12345567788899999986654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.72  E-value=0.0005  Score=52.23  Aligned_cols=94  Identities=16%  Similarity=0.156  Sum_probs=67.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      .++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++.|...+ ..+..+     .+.++..+-..+|+++.++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i-~gd~~~-----~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAV-LGNAAN-----EEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-ESCTTS-----HHHHHHTTGGGCSEEEECC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEE-ECCCCC-----HHHHHhcCcccCCEEEEEC
Confidence            457999999 999999999999999999999999999999988887543 333222     1233333445799999999


Q ss_pred             ChhhH----HHHHhcccCCCEEEEE
Q 019196          227 GGKLT----KESLKLLNWGAQILVI  247 (344)
Q Consensus       227 g~~~~----~~~~~~l~~~G~~v~~  247 (344)
                      +.+..    -...+.+.+..+++..
T Consensus        80 ~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEEE
Confidence            86432    2344555666666654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.72  E-value=0.00019  Score=60.76  Aligned_cols=105  Identities=20%  Similarity=0.250  Sum_probs=65.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|+++ .++.++.+.+    ++.+.. ..+..+-.+. +.++++.+..  ...
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNA-AEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCH-HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999988 4444433322    333432 2232222222 2233332221  124


Q ss_pred             CccEEEeCCChh---------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK---------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++++++|..                           ..+.++..++++|+++.++...
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  146 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQA  146 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHH
Confidence            699999998631                           0134455667789999987643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.72  E-value=0.00017  Score=61.15  Aligned_cols=105  Identities=17%  Similarity=0.240  Sum_probs=64.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH---HHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---EKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.   ++.+.+    ++.+....+-.-+....+.++++.+..  ..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999987643   233322    223433222111222222233333221  12


Q ss_pred             CCccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEecc
Q 019196          217 KGVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       217 ~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .++|++++++|..                          ..+.++..++++|+++.++..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            4799999999830                          113445566778999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.72  E-value=0.00016  Score=61.13  Aligned_cols=82  Identities=21%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+ .+.++++.+..  ...++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999999999999999998776654 3444322 22222222 12233332211  1236999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        83 lv~nAg~   89 (254)
T 1hdc_A           83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.71  E-value=0.00074  Score=56.50  Aligned_cols=99  Identities=14%  Similarity=0.075  Sum_probs=72.4

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC--cEEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV--DHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~--~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .....+.++++||..|+ | .|..+..+++. +.++++++.+++..+.+++    .+.  ...+...  +..+       
T Consensus        84 ~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~-------  151 (248)
T 2yvl_A           84 ALKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV--DFKD-------  151 (248)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS--CTTT-------
T ss_pred             HHhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc--Chhh-------
Confidence            36678889999999998 5 69999999998 8899999999998887764    343  1111111  1100       


Q ss_pred             Hh-cCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEec
Q 019196          213 AR-KLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       213 ~~-~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .. ...+||+|+.+.+.  ..+..+.+.|+++|+++....
T Consensus       152 ~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          152 AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             cccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            11 23579999988764  567889999999999998653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.69  E-value=0.00049  Score=54.87  Aligned_cols=94  Identities=18%  Similarity=0.215  Sum_probs=65.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~vid  224 (344)
                      +.+|+|+|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|...+. .+..+    .. .+... .-.++|+++.
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~-gd~~~----~~-~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVIS-GDATD----PD-FWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEE-CCTTC----HH-HHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEE-cCCCC----HH-HHHhccCCCCCCEEEE
Confidence            557999998 99999999999998 99999999999998888888876443 22221    11 22222 3457999999


Q ss_pred             CCChhh-HHH---HHhcccCCCEEEEE
Q 019196          225 PVGGKL-TKE---SLKLLNWGAQILVI  247 (344)
Q Consensus       225 ~~g~~~-~~~---~~~~l~~~G~~v~~  247 (344)
                      |++... ...   ..+.+.+..+++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            998632 222   33444555566653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.69  E-value=0.00014  Score=60.63  Aligned_cols=81  Identities=16%  Similarity=0.066  Sum_probs=54.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      ++++||+|+++++|..++..+...|++|++++++.++.+.+. +++.. ..+..+-.+. +.++++.+..  ...++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHH-EDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSH-HHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhcCCCcEE
Confidence            578999999999999999999899999999999988776553 33322 2222222221 2233332221  12379999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.69  E-value=9.9e-05  Score=61.73  Aligned_cols=169  Identities=20%  Similarity=0.138  Sum_probs=98.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH--HHHHHHHhcCCcEEE---eCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFLKSLGVDHVV---DLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~~g~~~v~---~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .|+.+||+|+++++|.+.++.+...|++|++++++.  +..+.+++.|.....   |..+...   .++.   ....++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~---~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDS---FTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTS---STTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHH---HHhCCCC
Confidence            478999999999999999999999999999999874  334555666654332   2333222   1111   2235799


Q ss_pred             EEEeCCChh--------------------------hHHHHHhcc-c--CCCEEEEEeccCCCCCCcc-h-----------
Q 019196          221 VLYDPVGGK--------------------------LTKESLKLL-N--WGAQILVIGFASGEIPVIP-A-----------  259 (344)
Q Consensus       221 ~vid~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~-~-----------  259 (344)
                      +++|++|..                          ..+.++..| +  .+|++|.++...+...... .           
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~  161 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAG  161 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHH
Confidence            999999841                          123444444 3  4689999986654322111 0           


Q ss_pred             ------hhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          260 ------NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                            .++-.+++++.....+.......+..... +...+.+.+.   .+....-..+|+..+..+|.+.
T Consensus       162 ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~-~~~~~~~~~~---~PlgR~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          162 LTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD-AARNKAILER---IPAGRWGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-HHHHHHHHTT---CTTSSCBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC-HHHHHHHHhC---CCCCCCcCHHHHHHHHHHHhCc
Confidence                  12356788888877665432211111111 1111111111   1222233578999988888754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.69  E-value=0.00023  Score=61.75  Aligned_cols=81  Identities=22%  Similarity=0.313  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+.    ..+... .+..+-.+. +.+.++.+..  ...+
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL-DEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999988765542    234332 222222222 2233333221  1237


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus       109 id~lvnnAg  117 (301)
T 3tjr_A          109 VDVVFSNAG  117 (301)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.68  E-value=0.00015  Score=61.96  Aligned_cols=82  Identities=26%  Similarity=0.349  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++.. ..+..+-.+. +.++++.+..  ..+++|+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDP-DSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            568899999999999999999999999999999998876655 445422 2332222222 2233332211  1237999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.68  E-value=0.0002  Score=61.48  Aligned_cols=82  Identities=27%  Similarity=0.326  Sum_probs=55.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEE-EeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +++.... +..+-.+. +.+.++.+..  ...++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSL-QDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999999999999999999988776653 4543332 22222221 2223322211  1247999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        83 lvnnAg~   89 (281)
T 3zv4_A           83 LIPNAGI   89 (281)
T ss_dssp             EECCCCC
T ss_pred             EEECCCc
Confidence            9999873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.68  E-value=0.00026  Score=60.29  Aligned_cols=104  Identities=21%  Similarity=0.290  Sum_probs=64.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|+++.+ +.++.+.+    +..+.... +..+-.+. +.++++.+..  ...
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDP-AAVRRLFATAEEAFG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            5789999999999999999998888999988744 44443333    33443332 22222221 2233332221  123


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++|++++++|..                          ..+.++..++++|+++.++..
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            799999999731                          123455667778999998754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.67  E-value=0.00031  Score=58.77  Aligned_cols=79  Identities=25%  Similarity=0.318  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++....++..+-.+. +.+.+..+  ...++|++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~--~~~~id~vi~   82 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALG--SVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHT--TCCCCCEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHH--HcCCCCEEEE
Confidence            467899999999999999999998999999999998776654 3343223343332222 22333332  2246999999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        83 ~Ag   85 (244)
T 3d3w_A           83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.67  E-value=0.00077  Score=58.24  Aligned_cols=106  Identities=19%  Similarity=0.242  Sum_probs=69.5

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|  ++|..+++.+...|++|++++++.+..+.+    ++.+....+..+-.+. +.++++.+..  ...
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDA-ESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            468999999986  999999999988999999999986544333    3344434443332222 2233333221  113


Q ss_pred             CccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                              ..+.++..++++|+++.++....
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            699999998731                              11344556777899999986554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.67  E-value=0.00016  Score=60.80  Aligned_cols=82  Identities=30%  Similarity=0.429  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +++.. ..+..+-.+. +.++++.+..  ...++|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNP-ESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHCCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999999988766553 33322 2222222221 2233332221  1236999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        87 lv~nAg~   93 (248)
T 3op4_A           87 LVNNAGI   93 (248)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.67  E-value=0.00025  Score=60.17  Aligned_cols=81  Identities=28%  Similarity=0.441  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++    +... .+..+-.+. +.+.++.+..  ...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP-EGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999999999999999999989999999999987665432 22    4332 222222221 2233322211  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        85 ~id~lv~~Ag   94 (263)
T 3ai3_A           85 GADILVNNAG   94 (263)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.66  E-value=0.00019  Score=60.61  Aligned_cols=82  Identities=24%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh-cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR-KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~~  219 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.    +.+... .+..+-.+ .+.+.++.+.. ...++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhhCCc
Confidence            4678999999999999999999999999999999987655442    334332 22222222 12233322211 11479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999983

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.66  E-value=0.00042  Score=58.89  Aligned_cols=106  Identities=23%  Similarity=0.265  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++     +.. ..+..+-.+. +.+.++.+..  ..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH-HHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999988765443 222     111 2222222221 2233322211  12


Q ss_pred             CCccEEEeCCCh---hh---------------HHHHHhcccC-----CCEEEEEeccCC
Q 019196          217 KGVDVLYDPVGG---KL---------------TKESLKLLNW-----GAQILVIGFASG  252 (344)
Q Consensus       217 ~~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  252 (344)
                      .++|++++++|.   +.               ...++..++.     .|+++.++....
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  143 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence            368999999983   11               1233444443     589999886543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.65  E-value=0.00018  Score=61.62  Aligned_cols=82  Identities=20%  Similarity=0.312  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++.. ..+..+-.+. +.++++.+..  ...++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDE-QQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCH-HHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999988999999999998876655 445532 2332222222 2233322211  1236999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.65  E-value=0.00022  Score=60.31  Aligned_cols=81  Identities=17%  Similarity=0.318  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc---CCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---GVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. ++   +... .+..+-.+ .+.++++.+..  ...+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988766553 22   3222 22222222 12233332221  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.65  E-value=0.00033  Score=59.80  Aligned_cols=82  Identities=18%  Similarity=0.214  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHH---hcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKA---RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~---~~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+. +.++++.+.   ..+.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR-TERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999998765543    2234332 222222221 223333221   1114


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.65  E-value=0.00046  Score=58.39  Aligned_cols=81  Identities=22%  Similarity=0.363  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----C-CcEEEeCCCCCchhhHHHHHHH-hcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----G-VDHVVDLSNESVIPSVKEFLKA-RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g-~~~v~~~~~~~~~~~~~~~~~~-~~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++     + ....+..+-.+. +.+++..+. ....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP-GDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH-HHHHHHHHHHHHhc
Confidence            4678999999999999999999889999999999987655442 22     3 122332222222 223333322 1122


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        85 gid~lv~~Ag   94 (260)
T 2z1n_A           85 GADILVYSTG   94 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            3999999988

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.64  E-value=0.00026  Score=60.71  Aligned_cols=83  Identities=19%  Similarity=0.297  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|+++++|..++..+...|++|++++++.++.+.+    ++.+....+..-+..-.+.+.++.+..  ...++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999999988999999999998876544    223433222211222212233322211  12479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus       103 d~lv~nAg~  111 (279)
T 3sju_A          103 GILVNSAGR  111 (279)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.64  E-value=0.00053  Score=57.45  Aligned_cols=82  Identities=24%  Similarity=0.345  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+ .+.++++.+..  ...+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            367899999999999999999988999999999998766544    2334332 22222222 22233333221  2347


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.64  E-value=0.00016  Score=61.72  Aligned_cols=82  Identities=16%  Similarity=0.260  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+ .+.++++.+..  ...++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999998776554 4455332 22222222 12233332221  1236999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        89 lv~nAg~   95 (271)
T 3tzq_B           89 VDNNAAH   95 (271)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.64  E-value=0.00027  Score=59.47  Aligned_cols=82  Identities=22%  Similarity=0.262  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHH-HHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIK-FLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~-~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      .++++||+|++|++|..++..+...|++|++++++. ++.+ .+++.+... .+..+-.+. +.++++.+..  ...++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999998999999999987 6544 344555332 222222221 2233332211  124699


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.64  E-value=0.00029  Score=60.00  Aligned_cols=82  Identities=24%  Similarity=0.367  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hh----cCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KS----LGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~----~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++    .+... .+..+-.+. +.++++.+..  ...
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY-EEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999998765543 22    24332 222222221 2233332211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.64  E-value=0.00044  Score=59.19  Aligned_cols=81  Identities=26%  Similarity=0.354  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCC--c-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV--D-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~--~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+.  . ..+..+-.+. +.+.++.+..  ..
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE-EDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH-HHHHHHHHHHHHhC
Confidence            467899999999999999999988999999999998765544    22332  1 2222222221 2222222211  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++|+++|
T Consensus       110 g~iD~vi~~Ag  120 (279)
T 1xg5_A          110 SGVDICINNAG  120 (279)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.64  E-value=0.00035  Score=59.18  Aligned_cols=81  Identities=20%  Similarity=0.259  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hcCCcE-EEeCCCCCchhhHHHHHHHh---cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SLGVDH-VVDLSNESVIPSVKEFLKAR---KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-v~~~~~~~~~~~~~~~~~~~---~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +   +.+... .+..+-.+. +.++++.+..   .+.
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR-SERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            467899999999999999999988999999999998765543 2   234322 222222221 2233332221   114


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.63  E-value=0.00029  Score=59.92  Aligned_cols=81  Identities=19%  Similarity=0.317  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----CCcE-EEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVDH-VVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~-v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++     +... .+..+-.+. +.++++.+..  ..
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE-AQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            4678999999999999999999889999999999987665442 22     4332 222222221 2233332211  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      +++|++++++|
T Consensus        91 g~id~lv~nAg  101 (267)
T 1iy8_A           91 GRIDGFFNNAG  101 (267)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.63  E-value=0.00063  Score=57.74  Aligned_cols=107  Identities=14%  Similarity=0.226  Sum_probs=67.6

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCC--cEEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--DHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|  ++|..+++.+...|++|++++++.+..+.++    +.+.  ...+..+-.+. +.++++.+..  .
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND-AEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH-HHHHHHHHHHHHH
Confidence            467999999994  5999999999889999999988865443332    3332  22333222222 1233332221  1


Q ss_pred             CCCccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCCC
Q 019196          216 LKGVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       216 ~~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      ..++|++++++|..                              ..+.++..++++|+++.++.....
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  152 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE  152 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence            23699999998731                              123455677788999999866543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.63  E-value=0.00026  Score=59.79  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE-QHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999888999999999998766544    2334332 222222222 2233332211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.63  E-value=0.00031  Score=59.02  Aligned_cols=81  Identities=30%  Similarity=0.475  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+. +.++++.+..  ...+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR-QGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence            3678999999999999999999989999999999987765442    224332 222222221 2233332211  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (247)
T 2jah_A           85 LDILVNNAG   93 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.63  E-value=0.00033  Score=59.44  Aligned_cols=82  Identities=17%  Similarity=0.230  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+ .+.++++.+..  ...+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTSC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999988765542    334332 22222222 22233333221  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999999853

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.63  E-value=0.00023  Score=59.03  Aligned_cols=78  Identities=13%  Similarity=0.228  Sum_probs=54.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++||+|++|++|..++..+...|++|++++++.++.+.+. +++... .+.. +....+.++++.+... ..+|+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~~~~~v~~~~~~~~-~~~d~lv~~   79 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRAR-DLASHQEVEQLFEQLD-SIPSTVVHS   79 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEEC-CTTCHHHHHHHHHSCS-SCCSEEEEC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEee-cCCCHHHHHHHHHHHh-hcCCEEEEe
Confidence            35899999999999999999999999999999988877664 444221 2222 2222233444444433 235999999


Q ss_pred             CC
Q 019196          226 VG  227 (344)
Q Consensus       226 ~g  227 (344)
                      +|
T Consensus        80 Ag   81 (230)
T 3guy_A           80 AG   81 (230)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.62  E-value=0.00039  Score=58.46  Aligned_cols=79  Identities=25%  Similarity=0.388  Sum_probs=54.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHhc--CCCccEEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKARK--LKGVDVLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~~--~~~~d~vi  223 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-. ..+.++++.+...  ..++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR-NRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-CHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-CHHHHHHHHHHHHHhCCCCCEEE
Confidence            3689999999999999999988999999999998876655 3444322 2222222 2223444444322  23799999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.62  E-value=0.00042  Score=59.09  Aligned_cols=83  Identities=22%  Similarity=0.263  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+    ++.+....+-.-+....+.+.++.+..  ...++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            468999999999999999999999999999999998766544    233543332222222222233333221  23469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.62  E-value=0.00023  Score=60.91  Aligned_cols=82  Identities=22%  Similarity=0.331  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.++++.+..  ...+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP-DQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999988765544    233322 2333322222 2233333221  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00024  Score=60.98  Aligned_cols=82  Identities=21%  Similarity=0.366  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc---CCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---GVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. ++   +....+-.-+..-.+.+.++.+..  ...++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988766553 32   333222222222222233333221  12369


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++++++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.62  E-value=0.00033  Score=58.99  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+. +.++++.+..  ...+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP-ESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999988765542    234322 222222222 2233332211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.61  E-value=0.0002  Score=59.65  Aligned_cols=168  Identities=17%  Similarity=0.142  Sum_probs=97.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+..  .+.......-+..-.+.++++.+..  +++|+++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLVNN   85 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--RHPRIRREELDITDSQRLQRLFEAL--PRLDVLVNN   85 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--CCTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--hcCCeEEEEecCCCHHHHHHHHHhc--CCCCEEEEC
Confidence            689999999999999999999999999999999987755432  2222111111222223355555543  479999999


Q ss_pred             CChh------------------------hHHHHHhccc-CCCEEEEEeccCCCCCCcch-h-----------------hh
Q 019196          226 VGGK------------------------LTKESLKLLN-WGAQILVIGFASGEIPVIPA-N-----------------IA  262 (344)
Q Consensus       226 ~g~~------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~-~-----------------~~  262 (344)
                      +|..                        ..+.++..|+ .+|++|.++...+....... .                 ++
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~El  165 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEY  165 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9831                        1134455554 47999999866543221110 1                 23


Q ss_pred             hccceEEEEEEeccccccCchhH---HHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          263 LVKNWTVHGLYWGSYKIHRPHVL---EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                      -.+++++.....+.......+..   .+..+.+.   +.-    +....-..+|+.++..+|.+.
T Consensus       166 a~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~---~~~----PlgR~g~peeiA~~v~fLaSd  223 (242)
T 4b79_A          166 AAERIRVNAIAPGWIDTPLGAGLKADVEATRRIM---QRT----PLARWGEAPEVASAAAFLCGP  223 (242)
T ss_dssp             GGGTEEEEEEEECSBCCC-----CCCHHHHHHHH---HTC----TTCSCBCHHHHHHHHHHHTSG
T ss_pred             hhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHH---hcC----CCCCCcCHHHHHHHHHHHhCc
Confidence            46678888777654322110000   12222222   221    122223567888888888753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.61  E-value=8.5e-05  Score=61.43  Aligned_cols=89  Identities=21%  Similarity=0.296  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.+             .|..+.+   .++++.+..  .++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~---~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEK---SVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHH---HHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHH---HHHHHHHHh--CCCCEEEEC
Confidence            4678999999999999999999888999999988754             2333322   244444333  468999998


Q ss_pred             CChh---------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          226 VGGK---------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       226 ~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +|..                           ..+.++..++++|+++.++....
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            8731                           12345566777899999986543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.61  E-value=0.00013  Score=61.74  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+ ++++.. ..+..+-.+. +.++++.+..  ...++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNE-ADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999999999999999987765544 344422 2222222221 2233332221  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        85 lv~nAg   90 (257)
T 3tpc_A           85 LVNCAG   90 (257)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.61  E-value=0.00061  Score=58.82  Aligned_cols=106  Identities=20%  Similarity=0.288  Sum_probs=68.6

Q ss_pred             CCCEEEEecCCCh--HHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGG--VGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~--~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|+  +|..+++.+...|++|++++++++..+.+    ++.+....+..+-.+. +.++++.+..  ...
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADA-ASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            5789999999855  99999999999999999999886533333    2334333333322222 2233333221  124


Q ss_pred             CccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                              ..+.++..++++|+++.++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            799999998731                              12345566778999999986553

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.60  E-value=0.00057  Score=55.97  Aligned_cols=92  Identities=22%  Similarity=0.278  Sum_probs=63.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|.+|..+++.+...|.+|+++++++++...+. .+. .++..+-.+...      ...  .++|+||+|+|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~D~~d~~~------~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDI-NILQKDIFDLTL------SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSS-EEEECCGGGCCH------HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCC-eEEeccccChhh------hhh--cCCCEEEECCcC
Confidence            6999999999999999999999999999999987765543 233 333333222211      111  469999999985


Q ss_pred             h---------hHHHHHhcccCC--CEEEEEecc
Q 019196          229 K---------LTKESLKLLNWG--AQILVIGFA  250 (344)
Q Consensus       229 ~---------~~~~~~~~l~~~--G~~v~~g~~  250 (344)
                      .         ....+++.++..  ++++.++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            2         224455666554  688887654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.60  E-value=0.00045  Score=57.72  Aligned_cols=79  Identities=25%  Similarity=0.270  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +......+..+-.+. +.+.++.+  ...++|++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~--~~~~id~vi~   82 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALG--GIGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHT--TCCCCSEEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-HHHHHHHH--HcCCCCEEEE
Confidence            4678999999999999999999989999999999987765543 332223333322221 22333332  2246899999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        83 ~Ag   85 (244)
T 1cyd_A           83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            988

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.60  E-value=0.00046  Score=58.16  Aligned_cols=83  Identities=25%  Similarity=0.257  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++....+-.-+....+.++++.+..  ...++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999999988999999999998776554 344533222222222222233332221  12368999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.60  E-value=0.00026  Score=59.85  Aligned_cols=105  Identities=18%  Similarity=0.174  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH---HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL---KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++.+||+|+++++|.+.++.+...|++|++++++.++.+.+   ++.+.. ..+..+-.+. +.++++.+..  ..+++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDD-AQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCH-HHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999887654433   333432 2222222221 2233332221  12479


Q ss_pred             cEEEeCCChh-------------------------hHHHHHhccc-CCCEEEEEeccC
Q 019196          220 DVLYDPVGGK-------------------------LTKESLKLLN-WGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~  251 (344)
                      |+++|++|..                         ..+.++..|+ .+|++|.++...
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            9999999831                         1234444554 479999988654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.59  E-value=0.00049  Score=58.22  Aligned_cols=81  Identities=23%  Similarity=0.306  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh---cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR---KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~---~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +   .+... .+..+-.+ .+.++++.+..   ...
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999999999887665442 2   24322 22222222 22233333322   135


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.59  E-value=0.00043  Score=58.66  Aligned_cols=82  Identities=27%  Similarity=0.347  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+.    +.+... .+..+-.+ .+.+.++....  ....
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence            5689999999999999999999889999999999988765542    234332 22222222 12233322211  1236


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.58  E-value=0.00051  Score=58.39  Aligned_cols=81  Identities=20%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-H---hc--CCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-K---SL--GVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+ +   +.  +........+....+.++++.+..  .++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY--PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC--CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc--CCC
Confidence            468999999999999999999989999999999998765543 2   22  222111112222223344444432  479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.58  E-value=0.00025  Score=60.30  Aligned_cols=80  Identities=25%  Similarity=0.419  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h----cCCcE-EE--eCCCCCch-hhHHHHHHHhcC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVDH-VV--DLSNESVI-PSVKEFLKARKL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~~~-v~--~~~~~~~~-~~~~~~~~~~~~  216 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. +    .+... .+  |..+.+.. +..+++.+..  
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF--   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence            4689999999999999999999999999999999987765442 2    34332 22  33333321 1122222222  


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++++++|
T Consensus        97 g~id~lv~nAg  107 (266)
T 4egf_A           97 GGLDVLVNNAG  107 (266)
T ss_dssp             TSCSEEEEECC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.57  E-value=0.00029  Score=60.19  Aligned_cols=106  Identities=22%  Similarity=0.267  Sum_probs=66.7

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHH---HHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  |++|..+++.+...|++|++++++.+   ..+.+. +.+....+..+-.+. +.+.++.+..  ...
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999998  99999999999889999999998864   333332 234223333332222 2233332221  124


Q ss_pred             CccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..                              ..+.++..++++|+++.++....
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS  148 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchh
Confidence            799999998731                              01334455555799999986543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.57  E-value=0.00035  Score=58.84  Aligned_cols=82  Identities=17%  Similarity=0.228  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----c--C--CcEEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--G--VDHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~--g--~~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.+    .  +  ....+..+-.+. +.++++.+..  .
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC-TKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH-HHHHHHHHHHHHh
Confidence            46789999999999999999998899999999999887655432    1  2  222333332222 1222222211  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999984

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.57  E-value=0.00034  Score=59.22  Aligned_cols=81  Identities=26%  Similarity=0.301  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++... ..+..+-.+. +.++++.+..  ..+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP-AQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999999988999999999998776554 334322 2222222221 2223322211  1136999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        85 lv~~Ag   90 (260)
T 1nff_A           85 LVNNAG   90 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.57  E-value=0.0004  Score=59.45  Aligned_cols=81  Identities=28%  Similarity=0.430  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV-PEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999999998765543    2234332 222222221 2233332211  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus       100 iD~lv~~Ag  108 (277)
T 2rhc_B          100 VDVLVNNAG  108 (277)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.57  E-value=0.00024  Score=59.14  Aligned_cols=81  Identities=26%  Similarity=0.336  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-----hcCCcEE-EeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-----SLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.     ..+.... +..+-.+. +.+.++.+..  ...+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA-ESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH-HHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999999999988765442     2343322 22222221 1122221110  1136


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        81 id~li~~Ag~   90 (235)
T 3l77_A           81 VDVVVANAGL   90 (235)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.57  E-value=0.00041  Score=58.82  Aligned_cols=81  Identities=23%  Similarity=0.311  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+. +.+.+..+..  ...+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE-EAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999987665442    224332 222222221 2222222211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        85 id~lv~nAg   93 (262)
T 1zem_A           85 IDFLFNNAG   93 (262)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.56  E-value=0.00042  Score=58.32  Aligned_cols=82  Identities=20%  Similarity=0.282  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE--EEeCCCCCchhhHHHHHHHh-cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH--VVDLSNESVIPSVKEFLKAR-KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~~~~~~~~~~-~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++...  .+..+-.+. +.+++..+.. ...++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDA-EAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCH-HHHHHHHHHHHhhCCCcE
Confidence            467899999999999999999988999999999998776544 3444322  232222222 2222222211 1246999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +|+++|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.56  E-value=0.00041  Score=59.11  Aligned_cols=81  Identities=19%  Similarity=0.298  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. ++.....+..+-.+. +.++++.+..  ...++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQE-DDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSH-HHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999999988766553 343223333332222 2233332211  12369999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      |+++|
T Consensus        87 v~nAg   91 (270)
T 1yde_A           87 VNNAG   91 (270)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.56  E-value=0.0003  Score=60.02  Aligned_cols=81  Identities=23%  Similarity=0.326  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|..++..+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.++++.+..  ...+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA-TAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999988999999999998766544    233422 2222222221 2233332211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus       106 iD~lvnnAg  114 (270)
T 3ftp_A          106 LNVLVNNAG  114 (270)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.56  E-value=0.00041  Score=59.56  Aligned_cols=82  Identities=18%  Similarity=0.277  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc---CCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---GVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. ++   +... .+..+-.+. +.++++.+..  ..++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE-LQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhCC
Confidence            4688999999999999999999999999999999988766553 32   3322 222222222 2223322211  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.56  E-value=0.00023  Score=59.30  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+.+|||+|++|.+|..+++.+...|++|++++++.++.+.+...+...++..+- ...    .+   .  -.++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~----~~---~--~~~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDF----SH---A--FASIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCC----GG---G--GTTCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHH----HH---H--HcCCCEEEE
Confidence            4678999999999999999999889999999999998888777666523333222 222    11   1  137999999


Q ss_pred             CCChhh--------------HHHHHhccc--CCCEEEEEeccCC
Q 019196          225 PVGGKL--------------TKESLKLLN--WGAQILVIGFASG  252 (344)
Q Consensus       225 ~~g~~~--------------~~~~~~~l~--~~G~~v~~g~~~~  252 (344)
                      ++|...              ....++.++  ..++++.++....
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            998421              122333333  2468998886543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.56  E-value=0.00039  Score=58.32  Aligned_cols=79  Identities=25%  Similarity=0.347  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.++.....+..+-.+ .+.++++.+.  ..++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK-KKQIDQFANE--VERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTC-HHHHHHHHHH--CSCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCC-HHHHHHHHHH--hCCCCEEEEC
Confidence            467899999999999999999999999999999988766544333212223222222 1223333332  2479999999


Q ss_pred             CC
Q 019196          226 VG  227 (344)
Q Consensus       226 ~g  227 (344)
                      +|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.55  E-value=0.00038  Score=59.05  Aligned_cols=81  Identities=20%  Similarity=0.315  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcC-Cc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLG-VD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g-~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+.    +.+ .. ..+..+-.+. +.++++.+..  ...
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR-AQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH-HHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999988765442    233 22 2222222222 2233332211  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        88 ~id~lvnnAg   97 (262)
T 3pk0_A           88 GIDVVCANAG   97 (262)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999988

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.55  E-value=0.00068  Score=56.98  Aligned_cols=74  Identities=30%  Similarity=0.326  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      -.++++||+|++|++|..+++.+...|++|++++++.+.   +++++....+ .+-   .+.++.+.+...  ++|++++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~-~D~---~~~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKRSGHRYVV-CDL---RKDLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHTCSEEEE-CCT---TTCHHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHhhCCeEEE-eeH---HHHHHHHHHHhc--CCCEEEE
Confidence            357899999999999999999998899999999998743   3444522222 222   222455554443  7999999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        88 ~Ag   90 (249)
T 1o5i_A           88 NAG   90 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.55  E-value=0.00044  Score=58.38  Aligned_cols=80  Identities=23%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+... .+..+-.+. +.++++.+..  ...++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR-DQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999987655432    234322 222222222 2233332211  12479


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++++++|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.54  E-value=0.00038  Score=58.95  Aligned_cols=82  Identities=24%  Similarity=0.391  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-HHHH-Hhc----CCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFL-KSL----GVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~-~~~----g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++ .+.+ +++    +....+..-+..-.+.++++.+..  ...
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36789999999999999999999999999999988765 4433 222    433222222222222233332211  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.54  E-value=0.00032  Score=59.42  Aligned_cols=81  Identities=25%  Similarity=0.252  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++... .+..+-.+. +.++++.+..  ...++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSE-KDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHCCCCCE
Confidence            467999999999999999999998999999999987765544 4455332 222222221 2233332211  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +|+++|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.54  E-value=0.00025  Score=62.74  Aligned_cols=83  Identities=19%  Similarity=0.324  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-----------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----------IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .++++||+|+++++|.+++..+...|++|++++++.++           .+.+++.|....+..-+....+.++++.+..
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            47899999999999999999999899999999988653           2233444543222111211222233333221


Q ss_pred             --cCCCccEEEeCCCh
Q 019196          215 --KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 --~~~~~d~vid~~g~  228 (344)
                        ...++|++++++|.
T Consensus       124 ~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence              11379999999983

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.53  E-value=0.00052  Score=58.81  Aligned_cols=82  Identities=21%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------HHHHHH----HHhcCCcEEE-eCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKF----LKSLGVDHVV-DLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------------~~~~~~----~~~~g~~~v~-~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|.++++.+...|++|++++++            .++.+.    +++.+....+ ..+-.+ .+.++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHH
Confidence            46899999999999999999999999999999986            333332    2344543322 222222 12233


Q ss_pred             HHHHHh--cCCCccEEEeCCCh
Q 019196          209 EFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~  228 (344)
                      ++.+..  ..+++|++++++|.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            332221  12369999999883

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.53  E-value=0.0011  Score=55.53  Aligned_cols=80  Identities=23%  Similarity=0.311  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++|. ..+..+-.+. +.+++..+..  ..+++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-HPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-EEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            367899999999999999999998999999999998876655 34553 3333322222 1122222211  12369999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++++|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.53  E-value=0.00048  Score=58.73  Aligned_cols=82  Identities=16%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+    ++.+... .+..+-.+. +.+.++.+..  ...+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR-EDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCH-HHHHHHHHHHHHHCCC
Confidence            467999999999999999999998999999999998765543    2234332 232322222 2233332211  1246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|+++|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999873

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.53  E-value=0.00035  Score=59.83  Aligned_cols=82  Identities=27%  Similarity=0.345  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.. ..+..+-.+. +.++++.+..  ...++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDG-ERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCH-HHHHHHHHHHHHhCCCCCE
Confidence            357899999999999999999999999999999998876655 344432 2232322222 2233222211  1236999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        83 lv~~Ag~   89 (281)
T 3m1a_A           83 LVNNAGR   89 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.53  E-value=0.00044  Score=58.60  Aligned_cols=81  Identities=23%  Similarity=0.322  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCC-cEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~-~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. ++.. ...+..+-.+. +.++++.+..  ...++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKR-ASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCH-HHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4678999999999999999999999999999999987766553 3432 12232222221 2222222211  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        90 lv~~Ag   95 (263)
T 3ak4_A           90 LCANAG   95 (263)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.53  E-value=0.0003  Score=58.93  Aligned_cols=80  Identities=31%  Similarity=0.374  Sum_probs=54.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHhc-CCc-EEEeCCCCCchhhHHHHHH----HhcCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKSL-GVD-HVVDLSNESVIPSVKEFLK----ARKLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~~~~----~~~~~~  218 (344)
                      ++++||+|++|++|..+++.+...|  ++|++++++.++.+.++++ +.. ..+..+-.+. +.+.++.+    ..+..+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD-KSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCH-HHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCH-HHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999998899  9999999998877666655 322 2232222221 22333322    222126


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+|+|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999986

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.52  E-value=0.00099  Score=55.84  Aligned_cols=81  Identities=20%  Similarity=0.267  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC---CcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++.   ....+..+-.+. +.+.++.+..  ...++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE-DGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence            467899999999999999999988999999999998766544 3332   112333322221 2222222211  11369


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|+++|
T Consensus        84 d~li~~Ag   91 (251)
T 1zk4_A           84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.52  E-value=0.00044  Score=59.14  Aligned_cols=81  Identities=15%  Similarity=0.291  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hh----cCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KS----LGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~----~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+ ++    .+... .+..+-.+. +.++++.+..  ...
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP-PAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998765443 22    24332 222222221 2233332211  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.51  E-value=0.00047  Score=57.81  Aligned_cols=82  Identities=28%  Similarity=0.354  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA-EDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999998 76655433    2234332 222222221 2233332211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.51  E-value=0.00049  Score=58.22  Aligned_cols=81  Identities=19%  Similarity=0.236  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+. +.++++.+..  ..++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA-EDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence            468999999999999999999998999999999998765443    2234332 222222221 2222222211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++++++|
T Consensus        92 iD~lv~~Ag  100 (260)
T 2zat_A           92 VDILVSNAA  100 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.51  E-value=0.00047  Score=57.74  Aligned_cols=81  Identities=27%  Similarity=0.427  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-----cCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.+     .+... .+..+-.+. +.+++..+..  ...
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE-ESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            46789999999999999999998899999999999876654421     34332 222222221 2233322211  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        85 ~~d~vi~~Ag   94 (248)
T 2pnf_A           85 GIDILVNNAG   94 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.50  E-value=0.00051  Score=58.08  Aligned_cols=81  Identities=25%  Similarity=0.289  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++ .++.++.+.+    ++.+.... +..+-.+ .+.++++.+..  ...
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999987 7777665444    23343332 2222222 22233333221  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999997

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.50  E-value=0.00043  Score=59.10  Aligned_cols=82  Identities=17%  Similarity=0.215  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHHH-hc----CCcE-EE--eCCCC-CchhhHHHHHHHh-
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFLK-SL----GVDH-VV--DLSNE-SVIPSVKEFLKAR-  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~~-~~----g~~~-v~--~~~~~-~~~~~~~~~~~~~-  214 (344)
                      .++++||+|++|++|..++..+...|++|+++++ +.++.+.+. ++    +... .+  |..+. +..+.++++.+.. 
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999999889999999999 777655442 22    4322 22  33332 0002233332211 


Q ss_pred             -cCCCccEEEeCCC
Q 019196          215 -KLKGVDVLYDPVG  227 (344)
Q Consensus       215 -~~~~~d~vid~~g  227 (344)
                       ...++|++|+++|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence             1236999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.50  E-value=0.00057  Score=58.43  Aligned_cols=106  Identities=27%  Similarity=0.324  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------HHHHHHH----HhcCCcEEE-eCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVV-DLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+..    +..+....+ ..+-.+ .+.++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHH
Confidence            46899999999999999999999999999999876            4444332    334433322 222222 12233


Q ss_pred             HHHHHh--cCCCccEEEeCCChh----------------------hHHHHHhccc---CCCEEEEEeccCC
Q 019196          209 EFLKAR--KLKGVDVLYDPVGGK----------------------LTKESLKLLN---WGAQILVIGFASG  252 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~~----------------------~~~~~~~~l~---~~G~~v~~g~~~~  252 (344)
                      ++.+..  ...++|++++++|..                      ..+.++..+.   .+|+++.++...+
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            332221  123699999998841                      1133334443   3689999886543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.49  E-value=0.00065  Score=57.68  Aligned_cols=82  Identities=23%  Similarity=0.319  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h----cCCc--EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVD--HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~----~g~~--~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+.+. +    .+..  ..+..+-.+. +.++++.+..  ..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA-LQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCH-HHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999987765442 2    3322  2222222222 2233332221  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++++++|.
T Consensus        86 g~id~lvnnAg~   97 (265)
T 3lf2_A           86 GCASILVNNAGQ   97 (265)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999983

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.49  E-value=0.00067  Score=57.32  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH---cCCeEEEEecCHHHHHHHH-hc-----CCcE-EEeCCCCCchhhHHHHHHHh-
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKV---CGATIIAVARGAEKIKFLK-SL-----GVDH-VVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~---~g~~v~~~~~~~~~~~~~~-~~-----g~~~-v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      .++++||+|++|++|..++..+..   .|++|++++++.++.+.+. ++     +... .+..+-.+ .+.++++.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHHH
Confidence            357899999999999999988877   8999999999987665442 22     3222 22222222 22234443332 


Q ss_pred             ---cCCCcc--EEEeCCC
Q 019196          215 ---KLKGVD--VLYDPVG  227 (344)
Q Consensus       215 ---~~~~~d--~vid~~g  227 (344)
                         ..+++|  ++++++|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence               224578  9999876

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.49  E-value=0.00097  Score=56.25  Aligned_cols=80  Identities=25%  Similarity=0.290  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+..++++. ..+..+-.+. +.++++.+..  ..+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~-~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDE-RERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999998899999999998776333344442 4443332222 1222222211  123699999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.48  E-value=0.00055  Score=59.87  Aligned_cols=81  Identities=22%  Similarity=0.265  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCC--c-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV--D-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~--~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+.    ..+.  . ..+..+-.+. +.+.++.+..  ..
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR-EGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH-HHHHHHHHHHHHhC
Confidence            4679999999999999999999889999999999988765542    2232  2 2222222221 2233332221  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++|+++|
T Consensus        86 g~id~lv~nAg   96 (319)
T 3ioy_A           86 GPVSILCNNAG   96 (319)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999998

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.48  E-value=0.00058  Score=58.49  Aligned_cols=82  Identities=18%  Similarity=0.211  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCC---cE-EEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV---DH-VVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~---~~-v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+.   .. .+..+-.+ .+.+.++.+..  .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            468999999999999999999989999999999998765544    23332   22 22222222 12233332221  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        89 ~g~id~lv~nAg~  101 (281)
T 3svt_A           89 HGRLHGVVHCAGG  101 (281)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2369999999884

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.48  E-value=0.00065  Score=58.80  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------HHHHHHH----HhcCCcEEE-eCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVV-DLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|.++++.+...|++|++++++            .++.+.+    +..+....+ ..+-.+ .+.++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHH
Confidence            46899999999999999999999999999999876            4443332    344543322 222222 22233


Q ss_pred             HHHHHh--cCCCccEEEeCCC
Q 019196          209 EFLKAR--KLKGVDVLYDPVG  227 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g  227 (344)
                      ++.+..  ...++|++++++|
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHhCCCCEEEECCC
Confidence            332221  1246999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.48  E-value=0.00032  Score=60.33  Aligned_cols=82  Identities=20%  Similarity=0.310  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-----------HHHHHhcCCcEE-EeCCCCCchhhHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----------IKFLKSLGVDHV-VDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-----------~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~  213 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++           .+.+++.+.... +..+-.+ .+.++++.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHH
Confidence            46899999999999999999998899999999988652           222334453322 2222222 1223333221


Q ss_pred             h--cCCCccEEEeCCCh
Q 019196          214 R--KLKGVDVLYDPVGG  228 (344)
Q Consensus       214 ~--~~~~~d~vid~~g~  228 (344)
                      .  ...++|++++++|.
T Consensus        87 ~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            1  12369999999883

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.48  E-value=0.00028  Score=58.81  Aligned_cols=99  Identities=23%  Similarity=0.285  Sum_probs=63.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d~v  222 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+     +....+.. +....+.+.++.+    ..+..++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDG-NKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCT-TSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeC-CCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999999999999999999999999999998866432     11111111 1111122222222    2211479999


Q ss_pred             EeCCCh--------hh-------------------HHHHHhcccCCCEEEEEeccC
Q 019196          223 YDPVGG--------KL-------------------TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       223 id~~g~--------~~-------------------~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++++|.        +.                   .+.++..++++|+++.++...
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  132 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  132 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence            999882        10                   233455666678999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.48  E-value=0.00056  Score=57.97  Aligned_cols=82  Identities=21%  Similarity=0.243  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh---cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR---KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~---~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+... .+..+-.+ .+.++++.+..   .+.
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            467899999999999999999988999999999988765543    2234332 22222222 22233332221   124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.48  E-value=0.00046  Score=58.19  Aligned_cols=82  Identities=24%  Similarity=0.421  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++  .+.+++.+....+-.-+..-.+.+.++.+..  ...++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36789999999999999999998899999999987651  1222333433322222222222233332211  1236999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        83 lv~~Ag   88 (255)
T 2q2v_A           83 LVNNAG   88 (255)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.48  E-value=0.00062  Score=58.10  Aligned_cols=82  Identities=22%  Similarity=0.240  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh---cCCcE-EEeCCCCCchhhHHHHHHH-hcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH-VVDLSNESVIPSVKEFLKA-RKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~~~~~-~~~~~~d  220 (344)
                      .++++||+|+++++|..+++.+...|++|++++++++..+.+++   .+... .+..+-.+. +.+.++.+. ....++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADL-EGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHhcCCCc
Confidence            47899999999999999999999999999999976543333333   33322 222222222 222222211 1124799


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.47  E-value=0.00055  Score=59.93  Aligned_cols=83  Identities=27%  Similarity=0.386  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----------HHHHHH----HHhcCCcEEEeCCCCCchhhHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----------AEKIKF----LKSLGVDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~----------~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~  211 (344)
                      .++++||+|+++++|..++..+...|++|++++++          .++.+.    +++.+....+...+....+.+.++.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            57899999999999999999998899999999876          333322    2344544333322322222233333


Q ss_pred             HHh--cCCCccEEEeCCCh
Q 019196          212 KAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       212 ~~~--~~~~~d~vid~~g~  228 (344)
                      +..  ...++|++|+++|.
T Consensus       106 ~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            221  12369999999983

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.47  E-value=0.00066  Score=57.27  Aligned_cols=81  Identities=23%  Similarity=0.278  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.++++.+..  ...+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT-ESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCC
Confidence            467899999999999999999988999999999987765433    223432 2222222222 2233332211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.47  E-value=0.00068  Score=58.04  Aligned_cols=83  Identities=22%  Similarity=0.273  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-------------CHHHHHHH----HhcCCcEEEeCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-------------GAEKIKFL----KSLGVDHVVDLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-------------~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|..+++.+...|++|+++++             +.++.+.+    ++.+....+..-+....+.++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            5789999999999999999999999999999987             45554443    233433322211222222233


Q ss_pred             HHHHHh--cCCCccEEEeCCCh
Q 019196          209 EFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~  228 (344)
                      ++.+..  ...++|++++++|.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            333221  12379999999883

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.46  E-value=0.00076  Score=57.82  Aligned_cols=83  Identities=16%  Similarity=0.306  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH-H---hc-CCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-K---SL-GVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~-~---~~-g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+ +   +. +....+..-+....+.++++.+..  ..+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4678999999999999999999999999999998 44444433 2   22 333222222222222233333221  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.46  E-value=0.001  Score=57.45  Aligned_cols=81  Identities=14%  Similarity=0.230  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. ++    +... .+..+-.+. +.+.++.+..  ...
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP-DMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999999999999999999889999999999987655432 22    4322 222222221 2233332211  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|++|+++|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.45  E-value=0.00069  Score=57.89  Aligned_cols=82  Identities=24%  Similarity=0.271  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC--cEEEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHVVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++..  ...+-.-+..-.+.++++.+..  ...++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            467899999999999999999999999999999998766544 33321  2221111211222233333221  124799


Q ss_pred             EEEeCCC
Q 019196          221 VLYDPVG  227 (344)
Q Consensus       221 ~vid~~g  227 (344)
                      ++|+++|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.45  E-value=0.00059  Score=58.29  Aligned_cols=80  Identities=21%  Similarity=0.265  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh-cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR-KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~-~~~  217 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+    ++.+... .+  |..+.+.   +.++.+.. ...
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGA---GTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTH---HHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHH---HHHHHHHHHHhC
Confidence            468999999999999999999999999999999987755443    2334332 22  3333322   22222211 114


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.45  E-value=0.00068  Score=57.72  Aligned_cols=82  Identities=22%  Similarity=0.258  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE-SEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999887 44444333    3334332 222222222 2233332221  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       106 ~id~lv~nAg~  116 (269)
T 4dmm_A          106 RLDVLVNNAGI  116 (269)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.45  E-value=0.00064  Score=57.24  Aligned_cols=82  Identities=22%  Similarity=0.321  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----C-CcEEEeCCC--CCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----G-VDHVVDLSN--ESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g-~~~v~~~~~--~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+. ++    + ....+..+-  .+. +.++++.+..  .
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTS-ENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCH-HHHHHHHHHHHHh
Confidence            5789999999999999999999899999999999988765442 21    2 122332222  222 2223332221  2


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            3479999999873

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.00062  Score=58.56  Aligned_cols=81  Identities=26%  Similarity=0.411  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCHHHHHHHH-hc-----CCcE-EEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLK-SL-----GVDH-VVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~---~v~~~~~~~~~~~~~~-~~-----g~~~-v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .++++||+|+++++|..++..+...|+   +|++++++.++.+.+. ++     +... .+..+-.+ .+.++++.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ-AEKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC-GGGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHH
Confidence            467899999999999999987776676   9999999988766553 22     3222 22222221 222455544332


Q ss_pred             --CCCccEEEeCCC
Q 019196          216 --LKGVDVLYDPVG  227 (344)
Q Consensus       216 --~~~~d~vid~~g  227 (344)
                        ..++|++++++|
T Consensus       111 ~~~g~iD~lVnnAG  124 (287)
T 3rku_A          111 QEFKDIDILVNNAG  124 (287)
T ss_dssp             GGGCSCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence              237999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.44  E-value=0.00076  Score=56.45  Aligned_cols=82  Identities=24%  Similarity=0.363  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcC--CcEEEeCCC--CCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLG--VDHVVDLSN--ESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g--~~~v~~~~~--~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+.    +.+  ...++..+-  .+. +.+.++.+..  .
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~-~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATA-QQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCH-HHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999988765542    233  222332222  222 2223322211  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2379999999873

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.44  E-value=0.00037  Score=58.81  Aligned_cols=77  Identities=14%  Similarity=0.018  Sum_probs=53.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+.   +.+.+... .+..+..+..+++.+..  .++|++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~-~d~~~v~~~~~~~~~~~--g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKP-MSEQEPAELIEAVTSAY--GQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEE-CCCCSHHHHHHHHHHHH--SCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEE-ECHHHHHHHHHHHHHHh--CCCCEEEE
Confidence            46999999999999999999999999999999877655443   23433222 23333333333333332  46999999


Q ss_pred             CCC
Q 019196          225 PVG  227 (344)
Q Consensus       225 ~~g  227 (344)
                      ++|
T Consensus        79 nAg   81 (254)
T 1zmt_A           79 NDI   81 (254)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            886

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.43  E-value=0.00078  Score=57.83  Aligned_cols=35  Identities=40%  Similarity=0.382  Sum_probs=32.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .++++||+|+++++|..+++.+...|++|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            47899999999999999999999999999999876

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.43  E-value=0.00061  Score=56.56  Aligned_cols=80  Identities=18%  Similarity=0.205  Sum_probs=53.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++.+.+. +++....+..+-.+. +.+++..+..  ...++|+++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREE-GDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            568999999999999999999889999999999987766543 443223333332222 2222222211  113699999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.43  E-value=0.00064  Score=58.20  Aligned_cols=81  Identities=19%  Similarity=0.353  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cCC---c-EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGV---D-HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g~---~-~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+. +   .+.   . ..+..+-.+. +.++++.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE-DGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH-HHHHHHHHHHHHh
Confidence            4678999999999999999999989999999999987665442 2   232   2 2232222221 2223322211  1


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      ..++|++++++|
T Consensus        84 ~g~iD~lv~nAg   95 (280)
T 1xkq_A           84 FGKIDVLVNNAG   95 (280)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            236999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.42  E-value=0.00041  Score=59.52  Aligned_cols=82  Identities=21%  Similarity=0.308  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|.++++.+...|++|++++++.++.+.+. ++    +.. ..+..+-.+. +.++++.+..  ..+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP-DQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            5789999999999999999999899999999999987665442 22    222 3333332222 2233332211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++|+|.
T Consensus       111 ~iD~lvnnAG~  121 (281)
T 4dry_A          111 RLDLLVNNAGS  121 (281)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.42  E-value=0.00075  Score=57.58  Aligned_cols=82  Identities=23%  Similarity=0.371  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH-------HH----HHHhcCCcEE-EeCCCCCchhhHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-------IK----FLKSLGVDHV-VDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~-------~~----~~~~~g~~~v-~~~~~~~~~~~~~~~~~~  213 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++       .+    .++..+.... +..+-.+ .+.++++.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHH
Confidence            46899999999999999999998999999999988642       22    2233343322 2222222 2223333222


Q ss_pred             h--cCCCccEEEeCCCh
Q 019196          214 R--KLKGVDVLYDPVGG  228 (344)
Q Consensus       214 ~--~~~~~d~vid~~g~  228 (344)
                      .  ...++|++++++|.
T Consensus        84 ~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            1  12369999999983

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.41  E-value=0.00078  Score=57.35  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++ .+..+.+    ++.+... ++..+-.+. +.+.++.+..  ...
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE-SDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            47899999999999999999998999999999984 3333332    3344332 333332222 2222222211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.41  E-value=0.00066  Score=57.34  Aligned_cols=81  Identities=17%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+    +..+... .+..+-.+. +.+.+..+..  ...
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE-SDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            3678999999999999999999889999999998 76654433    2234322 222222222 2222222211  113


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.41  E-value=0.0008  Score=60.54  Aligned_cols=89  Identities=17%  Similarity=0.225  Sum_probs=70.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      -.+++|.|.|. |.+|..+++.++.+|++|+++++++.+...+...|+...      +    +.+..     ...|+++.
T Consensus       209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------s----L~eal-----~~ADVVil  272 (436)
T 3h9u_A          209 IAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------L----VEDVV-----EEAHIFVT  272 (436)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------C----HHHHT-----TTCSEEEE
T ss_pred             ccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------C----HHHHH-----hhCCEEEE
Confidence            36899999999 999999999999999999999999887777777776321      1    23332     36899999


Q ss_pred             CCChh-hH-HHHHhcccCCCEEEEEec
Q 019196          225 PVGGK-LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~-~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      +.+.. .+ ...+..|+++..++.++.
T Consensus       273 t~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          273 TTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             CSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             CCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            88763 33 467899999999988873

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.41  E-value=0.00074  Score=58.38  Aligned_cols=81  Identities=22%  Similarity=0.411  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCC---c-EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV---D-HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~---~-~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+.   . ..+..+-.+. +.++++.+..  .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA-SGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH-HHHHHHHHHHHHh
Confidence            4678999999999999999999889999999999987665442    2232   2 2222222222 2223222211  1


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      ..++|++++++|
T Consensus       104 ~g~iD~lvnnAG  115 (297)
T 1xhl_A          104 FGKIDILVNNAG  115 (297)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            236999999987

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.41  E-value=0.00079  Score=58.79  Aligned_cols=82  Identities=23%  Similarity=0.318  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------HHHHHHH----HhcCCcEEE-eCCCCCchhhHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------------AEKIKFL----KSLGVDHVV-DLSNESVIPSVK  208 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------------~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~  208 (344)
                      .++++||+|+++++|..+++.+...|++|++++++            .++.+..    ++.+....+ ..+-.+ .+.++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHH
Confidence            56899999999999999999999999999998765            4443332    334543322 222222 22233


Q ss_pred             HHHHHh--cCCCccEEEeCCCh
Q 019196          209 EFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~  228 (344)
                      ++.+..  ...++|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            333221  12379999999883

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.41  E-value=0.00057  Score=57.04  Aligned_cols=77  Identities=27%  Similarity=0.318  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEE--eCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV--DLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++  ..++++. ..+  |..+.+..+..+++.+..  .++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~--g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEAL--GGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHH--TSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHc--CCCCEEEE
Confidence            4689999999999999999999999999999998775  3344553 223  333322222223333222  46999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      ++|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.41  E-value=0.00082  Score=56.54  Aligned_cols=106  Identities=24%  Similarity=0.259  Sum_probs=64.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHH------
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKA------  213 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~------  213 (344)
                      .++++||+|+++++|..+++.+...|++|+++ .++.++.+..    ++.+... .+..+-.+. +.++.+.+.      
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESL-HGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCH-HHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999886 4544443332    2334322 222222222 112222211      


Q ss_pred             --hcCCCccEEEeCCChh-----------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          214 --RKLKGVDVLYDPVGGK-----------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       214 --~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                        .....+|++++++|..           .               .+.++..++++|+++.++....
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence              1123599999998731           0               1334445667899999886654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.40  E-value=0.00065  Score=57.39  Aligned_cols=81  Identities=22%  Similarity=0.226  Sum_probs=51.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HHHH-Hh---cCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFL-KS---LGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~-~~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++  .+.+ ++   .+... .+..+-.+. +.++++.+..  ...
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK-ANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH-HHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            5789999999999999999888889999999988765  4333 22   24322 222222221 2222222211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        81 ~iD~lv~nAg~   91 (258)
T 3a28_C           81 GFDVLVNNAGI   91 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.40  E-value=0.0019  Score=48.87  Aligned_cols=76  Identities=25%  Similarity=0.388  Sum_probs=57.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ..+++|.|+ |.+|..+++.+...|.+|+++++++++.+.+++.+... +..+..+     .+.++...-.++|+++.++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~-~~gd~~~-----~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDA-VIADPTD-----ESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE-EECCTTC-----HHHHHHSCCTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcE-EECCCCC-----HHHHHhCCcccCCEEEEec
Confidence            357999999 99999999999999999999999999988888877643 3333222     1222333445799999999


Q ss_pred             Chh
Q 019196          227 GGK  229 (344)
Q Consensus       227 g~~  229 (344)
                      +..
T Consensus        79 ~~~   81 (141)
T 3llv_A           79 SDD   81 (141)
T ss_dssp             SCH
T ss_pred             CCH
Confidence            963

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.40  E-value=0.00069  Score=56.93  Aligned_cols=81  Identities=21%  Similarity=0.334  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+    +..+... .+..+-.+. +.+++..+..  ...+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE-QELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHhcCC
Confidence            467899999999999999999988999999999998765433    2234332 222222221 2233322211  1237


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        89 ~d~vi~~Ag   97 (255)
T 1fmc_A           89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.40  E-value=0.0006  Score=57.15  Aligned_cols=80  Identities=23%  Similarity=0.253  Sum_probs=52.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc----CCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|++|++|..++..+...|++|++++++.++.+.+. ++    +.. ..+..+-.+. +.+++..+..  ...+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE-GDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence            468999999999999999999889999999999987665442 22    222 2222222222 2223322211  1236


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        81 id~li~~Ag   89 (250)
T 2cfc_A           81 IDVLVNNAG   89 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999986

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.39  E-value=0.00039  Score=59.11  Aligned_cols=81  Identities=16%  Similarity=0.222  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.... ...+..+-.+. +.++++.+..  ..+++|+++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPN-TLCAQVDVTDK-YTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTT-EEEEECCTTCH-HHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCC-ceEEEecCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            4678999999999999999999999999999999877654432211 12222222221 2223322211  123799999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99883

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.39  E-value=0.0036  Score=53.55  Aligned_cols=96  Identities=19%  Similarity=0.132  Sum_probs=63.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|||+|++|.+|..+++.+... |.+|+++++++++...+...+.. ++..+-.+    ...+....  .++|+||+|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~-~~~~D~~d----~~~l~~~~--~~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVS-VRQLDYFN----QESMVEAF--KGMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBE-EEECCTTC----HHHHHHHT--TTCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCE-EEEcCCCC----HHHHHHHH--hCCCEEEEeCC
Confidence            4899999999999999988877 89999999998765444333432 33332222    22333333  47999999987


Q ss_pred             hh--------hHHHHHhcccCC--CEEEEEeccC
Q 019196          228 GK--------LTKESLKLLNWG--AQILVIGFAS  251 (344)
Q Consensus       228 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  251 (344)
                      ..        ....+++.++..  ++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            41        223445555444  4888888654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.39  E-value=0.001  Score=57.32  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc---C-Cc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL---G-VD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g-~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ +++   + .. ..+..+-.+. +.++++.+..  ...
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP-GSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH-HHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999998765544 233   2 12 2232222222 2223322211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       119 ~iD~lvnnAg~  129 (293)
T 3rih_A          119 ALDVVCANAGI  129 (293)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.39  E-value=0.00049  Score=58.83  Aligned_cols=82  Identities=22%  Similarity=0.368  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc---C---Cc-EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL---G---VD-HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---g---~~-~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. ++   .   .. ..+..+-.+. +.+.+..+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD-AGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH-HHHHHHHHHHHHH
Confidence            4678999999999999999999889999999999987765442 33   2   11 2222222221 2222322211  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      .+++|++++++|.
T Consensus        84 ~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 FGKLDILVNNAGA   96 (278)
T ss_dssp             HSCCCEEEECCC-
T ss_pred             cCCCCEEEECCCC
Confidence            2369999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.39  E-value=0.001  Score=57.61  Aligned_cols=81  Identities=22%  Similarity=0.319  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h--------cCCcE-EEeCCCCCchhhHHHHHHHh-
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S--------LGVDH-VVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~--------~g~~~-v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+. +        .+... .+..+-.+. +.+.++.+.. 
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE-EEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH-HHHHHHHHHHH
Confidence            3679999999999999999999889999999999987655432 2        13222 222222221 2233322211 


Q ss_pred             -cCCCccEEEeCCC
Q 019196          215 -KLKGVDVLYDPVG  227 (344)
Q Consensus       215 -~~~~~d~vid~~g  227 (344)
                       ...++|++|+|+|
T Consensus        96 ~~~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence             1136999999988

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.38  E-value=0.0011  Score=56.92  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..+++.+...|++|+++.++.++.+.+    ++.+... .+..+-.+ .+.++++.+..  ...+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            367899999999999999999888899999988887765543    2234332 22222222 12233333211  2246


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++|+++|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.38  E-value=0.00089  Score=57.33  Aligned_cols=81  Identities=22%  Similarity=0.299  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EE--eCCCCCc-hhhHHHHHHHhcC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VV--DLSNESV-IPSVKEFLKARKL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~--~~~~~~~-~~~~~~~~~~~~~  216 (344)
                      .++++||+|+++++|..+++.+...|++|+++++ +.++.+.+    +..+... .+  |..+.+. .+..+++.+..  
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF--  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH--
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc--
Confidence            5789999999999999999999999999999985 55544433    2334332 22  3333222 11222222222  


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++++++|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            369999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.37  E-value=0.0014  Score=55.94  Aligned_cols=82  Identities=22%  Similarity=0.287  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-------------CHHHHHHH----HhcCCcEEE-eCCCCCchhhH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-------------GAEKIKFL----KSLGVDHVV-DLSNESVIPSV  207 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-------------~~~~~~~~----~~~g~~~v~-~~~~~~~~~~~  207 (344)
                      .++++||+|+++++|..+++.+...|++|+++++             +.++.+.+    +..+....+ ..+-.+ .+.+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHH
Confidence            4689999999999999999999999999999987             44544333    233433222 222222 2223


Q ss_pred             HHHHHHh--cCCCccEEEeCCCh
Q 019196          208 KEFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       208 ~~~~~~~--~~~~~d~vid~~g~  228 (344)
                      +++.+..  ...++|++++++|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            3332221  12469999999873

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.37  E-value=0.00081  Score=58.92  Aligned_cols=80  Identities=24%  Similarity=0.347  Sum_probs=50.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-----HHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-----AEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-----~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--  214 (344)
                      ++++||+|++|++|..+++.+...|++|++++++     .++.+.+    +..+... .+..+-.+. +.+.+..+..  
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~-~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ-VSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHH
Confidence            5789999999999999999999999999998775     3333333    2334332 232222221 2223322211  


Q ss_pred             cCCCccEEEeCCC
Q 019196          215 KLKGVDVLYDPVG  227 (344)
Q Consensus       215 ~~~~~d~vid~~g  227 (344)
                      ..+++|++++++|
T Consensus        84 ~~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 EDGRIDVLIHNAG   96 (324)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence            1247999999998

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.36  E-value=0.00045  Score=57.89  Aligned_cols=76  Identities=20%  Similarity=0.094  Sum_probs=52.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-e--cCHHHHHHH-Hhc-CCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-A--RGAEKIKFL-KSL-GVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~--~~~~~~~~~-~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ++++||+|++|++|..+++.+...|++|+++ +  ++.++.+.+ +++ +.+ +.  +..+.....+++.+.  ..++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~--~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-AL--AEQKPERLVDATLQH--GEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-EC--CCCCGGGHHHHHGGG--SSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-cc--CHHHHHHHHHHHHHH--cCCCCE
Confidence            3689999999999999999999999999999 6  888776655 344 322 22  333332223333222  247999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      +++++|
T Consensus        76 lv~~Ag   81 (244)
T 1zmo_A           76 IVSNDY   81 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.36  E-value=0.00076  Score=58.01  Aligned_cols=82  Identities=18%  Similarity=0.171  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHH-H----hcCCcE-EEeCCCCC---chhhHHHHHHHh-
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFL-K----SLGVDH-VVDLSNES---VIPSVKEFLKAR-  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~-~----~~g~~~-v~~~~~~~---~~~~~~~~~~~~-  214 (344)
                      .++++||+|++|++|.++++.+...|++|++++++. ++.+.+ +    +.+... .+..+-.+   ..+.+.++.+.. 
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            467899999999999999999988999999999987 554433 2    234322 22222222   022233333221 


Q ss_pred             -cCCCccEEEeCCC
Q 019196          215 -KLKGVDVLYDPVG  227 (344)
Q Consensus       215 -~~~~~d~vid~~g  227 (344)
                       ...++|++|+++|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence             1237999999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.35  E-value=0.00085  Score=57.83  Aligned_cols=42  Identities=26%  Similarity=0.200  Sum_probs=36.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~  187 (344)
                      .++++||+|+++++|.++++.+...|++|++++ ++.++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence            467899999999999999999999999999999 887765544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.35  E-value=0.00087  Score=56.56  Aligned_cols=79  Identities=19%  Similarity=0.274  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh-cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR-KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~~d~vi  223 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++  ..++++... .+..+-.+. +.++++.+.. ...++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVADLGDRARFAAADVTDE-AAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHHHTCTTEEEEECCTTCH-HHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhCCCCEEE
Confidence            36789999999999999999998899999999986543  344555332 222222222 2222222211 124799999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9998

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.34  E-value=0.00052  Score=58.20  Aligned_cols=82  Identities=24%  Similarity=0.362  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC---CeEEEEecCHHHHHHHHhc---CCc-EEE--eCCCCCc-hhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG---ATIIAVARGAEKIKFLKSL---GVD-HVV--DLSNESV-IPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g---~~v~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~-~~~~~~~~~~~~  215 (344)
                      .++++||+|++|++|..+++.+...|   ++|++++++.++.+.++++   +.. ..+  |..+.+. .+..+++.+..+
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            46789999999999999999998889   8999999987654433322   322 222  2333222 111222222222


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      ..++|++|+++|
T Consensus       100 ~~~id~li~~Ag  111 (267)
T 1sny_A          100 DQGLNVLFNNAG  111 (267)
T ss_dssp             GGCCSEEEECCC
T ss_pred             CCCccEEEECCC
Confidence            126999999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.34  E-value=0.00068  Score=57.06  Aligned_cols=82  Identities=23%  Similarity=0.397  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|++++++ .++.+.+    +..+... .+..+-.+. +.++++.+..  ...
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS-EACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999999999999999998899999999988 5554433    2224322 222222222 2233322211  113


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.33  E-value=0.0012  Score=49.90  Aligned_cols=76  Identities=18%  Similarity=0.266  Sum_probs=54.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++|+|+|+ |.+|..+++.+...|++|+++++++++.+.+++.+.. .+..+..+    .+.+ ......++|+++.|+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~----~~~l-~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH-AVIANATE----ENEL-LSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTC----HHHH-HTTTGGGCSEEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCC----HHHH-HhcCCCCCCEEEECC
Confidence            456999999 9999999999999999999999988877766665553 33322222    1222 211234799999999


Q ss_pred             Chh
Q 019196          227 GGK  229 (344)
Q Consensus       227 g~~  229 (344)
                      +.+
T Consensus        79 ~~~   81 (144)
T 2hmt_A           79 GAN   81 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            863

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.32  E-value=0.0012  Score=55.32  Aligned_cols=82  Identities=26%  Similarity=0.320  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++ .++.+.+    ++.+.... +..+-.+. +.++++.+..  ...
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA-DEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999888764 3444333    33444332 22222221 2233332211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.32  E-value=0.0012  Score=55.99  Aligned_cols=81  Identities=20%  Similarity=0.244  Sum_probs=53.0

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCH---HHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  |++|..+++.+...|++|++++++.   +..+.+. +.+....+..+-.+. +.++++.+..  ...
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAED-ASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence            46789999998  9999999999988999999999876   2333332 234333333332222 2233333322  224


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.31  E-value=0.0011  Score=56.35  Aligned_cols=82  Identities=20%  Similarity=0.263  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      ..++++||+|++|++|..+++.+...|++|+++ .++.++.+.+    ++.+... .+..+-.+ .+.++++.+..  ..
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999776 6666654433    2334332 22222222 12233333221  11


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      .++|++|+++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.30  E-value=0.0014  Score=55.88  Aligned_cols=81  Identities=19%  Similarity=0.362  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC---cEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV---DHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++.   ...+..+-.+. +.++++.+..  ...++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD-EDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence            467899999999999999999988999999999987765443 33432   12232222222 2223322211  12369


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++|+++|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.30  E-value=0.0011  Score=56.83  Aligned_cols=80  Identities=24%  Similarity=0.373  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc--EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.    +.+..  ..+..+-.+. +.+.++.+..  ...
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM-TFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCH-HHHHHHHHHHHHHcC
Confidence            3678999999999999999999889999999999988765442    23432  2222222221 2233322211  123


Q ss_pred             CccEEEeCC
Q 019196          218 GVDVLYDPV  226 (344)
Q Consensus       218 ~~d~vid~~  226 (344)
                      ++|++|++.
T Consensus       106 ~iD~li~na  114 (286)
T 1xu9_A          106 GLDMLILNH  114 (286)
T ss_dssp             SCSEEEECC
T ss_pred             CCCEEEECC
Confidence            799999983

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.28  E-value=0.00077  Score=55.29  Aligned_cols=95  Identities=16%  Similarity=0.214  Sum_probs=61.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|.+|..+++.+...|++|++++++.++.+..   ..-.++..+-.+.   .+.+.+..  .++|+||+|++.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~---~~~~~~~~--~~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWT---PEEMAKQL--HGMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSC---HHHHHTTT--TTCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCC---HHHHHHHH--cCCCEEEECCcC
Confidence            699999999999999999988899999999998754322   2223333333321   12232222  369999999985


Q ss_pred             hh----------HHHHHhcccCC--CEEEEEeccC
Q 019196          229 KL----------TKESLKLLNWG--AQILVIGFAS  251 (344)
Q Consensus       229 ~~----------~~~~~~~l~~~--G~~v~~g~~~  251 (344)
                      ..          ....++.++..  ++++.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            21          22333433433  5888887654

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.28  E-value=0.0064  Score=49.26  Aligned_cols=97  Identities=20%  Similarity=0.306  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~  212 (344)
                      ....+.++++||-+|+ | .|..+..+++. +++|++++.+++..+.+++    .|..   .++..+..+.   .     
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~-----  117 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---L-----  117 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---G-----
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---c-----
Confidence            5667889999999997 4 48888899888 8899999999988777753    4543   2332222221   1     


Q ss_pred             HhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||+|+...+.  +.++.+.+.|+|+|+++...
T Consensus       118 -~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          118 -ADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             -TTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -ccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEe
Confidence             112469999976543  35678889999999998764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.28  E-value=0.0013  Score=55.80  Aligned_cols=82  Identities=26%  Similarity=0.363  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCC-hHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-h---cC-Cc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAG-GVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LG-VD-HVVDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g-~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~g-~~-~v~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .++++||+|++| ++|..++..+...|++|++++++.++.+.+. +   .+ .. ..+..+-.+. +.++++.+..  ..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST-EAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH-HHHHHHHHHHHHHh
Confidence            468999999975 8999999999889999999999987765442 2   22 12 2232222222 2233332211  12


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|++|+++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            369999999883

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.28  E-value=0.00099  Score=56.06  Aligned_cols=107  Identities=21%  Similarity=0.283  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCH--HHHHHHHhc--CCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA--EKIKFLKSL--GVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~--~~~~~~~~~--g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++ |++++++.  +..+.+++.  +.. ..+..+-.+..+.++++.+..  ...
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3678999999999999999999989996 88888875  333434332  222 222222222112222222211  113


Q ss_pred             CccEEEeCCCh---hh---------------HHHHHhcccC-----CCEEEEEeccCC
Q 019196          218 GVDVLYDPVGG---KL---------------TKESLKLLNW-----GAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~  252 (344)
                      ++|++|+++|.   +.               .+.++..+..     +|+++.++....
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence            69999999983   11               1333444432     588999886543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.27  E-value=0.00089  Score=60.22  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=56.5

Q ss_pred             HhcCC-CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHHH----------------HHHHhcCCcEE-EeCCC
Q 019196          140 HRAQL-SSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKI----------------KFLKSLGVDHV-VDLSN  200 (344)
Q Consensus       140 ~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~----------------~~~~~~g~~~v-~~~~~  200 (344)
                      ...++ +.++++||+|+++++|++++..+.. .|++|+++.++.++.                +.+++.|.... +..+-
T Consensus        53 ~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           53 ARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             HTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             hccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            34455 4688999999999999999988888 999999988764321                34455664432 32322


Q ss_pred             CCchhhHHHHHHHh--cC-CCccEEEeCCCh
Q 019196          201 ESVIPSVKEFLKAR--KL-KGVDVLYDPVGG  228 (344)
Q Consensus       201 ~~~~~~~~~~~~~~--~~-~~~d~vid~~g~  228 (344)
                      .+. +..+++....  .. +++|+++|++|.
T Consensus       133 td~-~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSD-AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSH-HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCH-HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            222 2233332221  12 579999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.27  E-value=0.0011  Score=58.11  Aligned_cols=42  Identities=26%  Similarity=0.200  Sum_probs=36.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~  187 (344)
                      .++++||+|+++++|.++++.+...|++|++++ ++.++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            467899999999999999999999999999999 887765544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.27  E-value=0.0016  Score=55.51  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=54.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCC--c-EEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV--D-HVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.+. ++..  . ..+..+-.+ .+.++++.+..  ...++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCCE
Confidence            78999999999999999999999999999999988766543 3321  1 222222222 22244444332  1236899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.27  E-value=0.0012  Score=56.09  Aligned_cols=81  Identities=20%  Similarity=0.307  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++++ +.++.+.+    ++.+... .+..+-.+. +.+.++.+..  ...
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            4678999999999999999999889999999998 66554433    2335432 222222221 2223222211  113


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        99 ~~d~vi~~Ag  108 (274)
T 1ja9_A           99 GLDFVMSNSG  108 (274)
T ss_dssp             CEEEEECCCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.26  E-value=0.0012  Score=55.16  Aligned_cols=80  Identities=18%  Similarity=0.286  Sum_probs=52.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCHHHHHHHH-hc---CCc-EEEeCCCCCchhhHHHHHHHh
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-------TIIAVARGAEKIKFLK-SL---GVD-HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-------~v~~~~~~~~~~~~~~-~~---g~~-~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ++++||+|++|++|..+++.+...|+       +|++++++.++.+.+. ++   +.. ..+..+-.+. +.+.++.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM-ADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH-HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCH-HHHHHHHHHH
Confidence            46899999999999999998888899       9999999987665443 22   332 2222222221 2223222211


Q ss_pred             --cCCCccEEEeCCC
Q 019196          215 --KLKGVDVLYDPVG  227 (344)
Q Consensus       215 --~~~~~d~vid~~g  227 (344)
                        ...++|++|+|+|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence              1246999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.25  E-value=0.0018  Score=55.42  Aligned_cols=82  Identities=15%  Similarity=0.217  Sum_probs=54.1

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCH--HHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA--EKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+||+  +++|..+++.+...|++|++++++.  +..+.+.+ .+....+..+-.+. +.++++.+..  ...+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISD-QEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCH-HHHHHHHHHHHHHCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCH-HHHHHHHHHHHHHcCC
Confidence            46899999988  6699999999988999999999886  55555533 34333433332222 2233333221  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.24  E-value=0.00088  Score=56.46  Aligned_cols=81  Identities=26%  Similarity=0.314  Sum_probs=52.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH-hcCCcEE-EeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK-SLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      ++++||+|+++++|..+++.+...  |++|+.++++.++.+.+. +++.... +..+-.+ .+.++++.+..  ...++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCcc
Confidence            578999999999999999777665  478999999988776554 4443322 2222222 12233332221  124799


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus        81 ~lvnnAg~   88 (254)
T 3kzv_A           81 SLVANAGV   88 (254)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCcc
Confidence            99999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.23  E-value=0.0011  Score=55.32  Aligned_cols=82  Identities=21%  Similarity=0.311  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++ .++.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP-EDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH-HHHHHHHHHHHHhcC
Confidence            36789999999999999999999899999998 5554443332    2334332 222222222 2233322211  123


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.23  E-value=0.0013  Score=55.74  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|++|++|.++++.+...|++|++++++.++. +.+++.+.. .+..+-.+. +.+.++.+..  ...++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAV-ALYGDFSCE-TGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCE-EEECCTTSH-HHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCe-EEECCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence            357899999999999999999988999999999987653 334555542 333332222 2233333221  12479999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++++|
T Consensus       104 v~nAg  108 (260)
T 3gem_A          104 VHNAS  108 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.23  E-value=0.0014  Score=54.70  Aligned_cols=80  Identities=21%  Similarity=0.303  Sum_probs=51.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      ++++||+|++|++|..+++.+...|++|+++ .++.++.+.+    ++.+... .+..+-.+. +.++++.+..  ...+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE-ADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSH-HHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCH-HHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999985 7777655433    2234322 222222221 2233332211  1247


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        80 id~li~~Ag   88 (244)
T 1edo_A           80 IDVVVNNAG   88 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.22  E-value=0.00039  Score=58.40  Aligned_cols=76  Identities=28%  Similarity=0.321  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.  +  ...|..+.+.   ++++.+..  ...++|+++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~---~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDA---VDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHH---HHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHH---HHHHHHHHHHHcCCCCEEE
Confidence            4678999999999999999999889999999998765432211  1  2223333221   22222211  123689999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99873

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.22  E-value=0.00037  Score=58.08  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=63.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++|||+|++|++|..+++.+...| ++|+++++++++...+...+. .++..+-.+    .+.+.+..  .++|++|+|
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d----~~~~~~~~--~~~D~vv~~   95 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLN----HAALKQAM--QGQDIVYAN   95 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTE-EEEECCTTC----HHHHHHHH--TTCSEEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCc-EEEEecCCC----HHHHHHHh--cCCCEEEEc
Confidence            3589999999999999999999899 799999998875433222122 222222222    22233333  368999999


Q ss_pred             CChhh----HHHHHhcccCC--CEEEEEeccC
Q 019196          226 VGGKL----TKESLKLLNWG--AQILVIGFAS  251 (344)
Q Consensus       226 ~g~~~----~~~~~~~l~~~--G~~v~~g~~~  251 (344)
                      .+...    .+.++..++..  ++||.++...
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            88632    23455555443  5898887543

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.21  E-value=0.0022  Score=54.31  Aligned_cols=95  Identities=12%  Similarity=0.061  Sum_probs=70.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .++.+||.+|+ |. |..+..+++.. +.++++++.+++..+.+++.+.. .+...+.....         .....||+|
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~---------~~~~~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP---------FSDTSMDAI  152 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS---------BCTTCEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC---------CCCCceeEE
Confidence            57889999998 55 99899999886 78999999999988888776533 22222222110         123479999


Q ss_pred             EeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          223 YDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       223 id~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      +.......+..+.+.|+|+|+++.....
T Consensus       153 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          153 IRIYAPCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             EEESCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             EEeCChhhHHHHHHhcCCCcEEEEEEcC
Confidence            9655556788999999999999887644

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.21  E-value=0.0041  Score=52.45  Aligned_cols=42  Identities=26%  Similarity=0.206  Sum_probs=37.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence            467899999999999999999888999999999998776554

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.20  E-value=0.0043  Score=50.88  Aligned_cols=93  Identities=19%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|||+|+ |.+|...+..+...|++|++++.... ..+.+.+.+.-..+. .  .+.+        ..-.++|+||-
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~-~--~~~~--------~dL~~adLVIa   97 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR-K--KVGE--------EDLLNVFFIVV   97 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC-S--CCCG--------GGSSSCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE-C--CCCH--------hHhCCCCEEEE
Confidence            4678999999 99999999999999999999987643 333333333222221 1  1110        01247999999


Q ss_pred             CCChhhHHHHHhcccCCCEEEEEecc
Q 019196          225 PVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      +++.+..+..+...+..|..|.+...
T Consensus        98 AT~d~~~N~~I~~~ak~gi~VNvvD~  123 (223)
T 3dfz_A           98 ATNDQAVNKFVKQHIKNDQLVNMASS  123 (223)
T ss_dssp             CCCCTHHHHHHHHHSCTTCEEEC---
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeCC
Confidence            99987766555444457877765443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.19  E-value=0.0009  Score=56.36  Aligned_cols=84  Identities=23%  Similarity=0.269  Sum_probs=51.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHH----HHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--c
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKI----KFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~----~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      ..++++|||+|+++++|..++..+...|++|++++ ++.++.    +.+++.+.. ..+..+-.+. +.++++.+..  .
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDW-DSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCH-HHHHHHHHHHHHh
Confidence            34678999999999999999999988999999887 433332    222344433 2233322222 2233332211  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++++++|.
T Consensus        89 ~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 VGEIDVLVNNAGI  101 (256)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999873

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.19  E-value=0.0011  Score=55.80  Aligned_cols=93  Identities=19%  Similarity=0.252  Sum_probs=59.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCc--hhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV--IPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++||+|++|++|..+++.+...|++|++++++.++.+.      .     -..+.  .+.++++.+.. ..++|+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-----~~~Dl~~~~~v~~~~~~~-~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-----LSTAEGRKQAIADVLAKC-SKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-----TTSHHHHHHHHHHHHTTC-TTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-----cccCCCCHHHHHHHHHHh-CCCCCEEEEC
Confidence            479999999999999999998899999999987653211      0     01111  11122222211 1468999999


Q ss_pred             CChhh-------------------HHHHHhcccC--CCEEEEEeccCC
Q 019196          226 VGGKL-------------------TKESLKLLNW--GAQILVIGFASG  252 (344)
Q Consensus       226 ~g~~~-------------------~~~~~~~l~~--~G~~v~~g~~~~  252 (344)
                      +|...                   .+.++..+++  .|+++.++....
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence            87422                   2344444443  389999886543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.19  E-value=0.0015  Score=55.58  Aligned_cols=82  Identities=20%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|+++++|..+++.+...|++|++++ ++.++.+..    +..+.. ..+..+-.+. +.++++.+..  ...
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADF-ESCERCAEKVLADFG  102 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999988 544443322    223322 2332322222 2233322211  113


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++|+++|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.19  E-value=0.00094  Score=56.50  Aligned_cols=76  Identities=25%  Similarity=0.357  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++     .+.....+..+-.+. +.++.+.+..  ..+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-----GLPEELFVEADLTTK-EGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-----TSCTTTEEECCTTSH-HHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-----CCCcEEEEEcCCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            57899999999999999999999999999999987542     111111222222211 2233332221  234799999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      |++|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.19  E-value=0.0031  Score=56.26  Aligned_cols=87  Identities=23%  Similarity=0.256  Sum_probs=54.8

Q ss_pred             hcCC-CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHHH----------------HHHHHhcCCcEE-EeCCCC
Q 019196          141 RAQL-SSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEK----------------IKFLKSLGVDHV-VDLSNE  201 (344)
Q Consensus       141 ~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~~----------------~~~~~~~g~~~v-~~~~~~  201 (344)
                      ...+ ..++++||+|+++++|.+.+..+.. .|++|++++++.++                .+.+++.|.... +..+-.
T Consensus        40 ~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           40 EGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             HCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            3344 5678999999999999999988888 99999988765432                123345564432 322222


Q ss_pred             CchhhHHHHHHHh--cCCCccEEEeCCCh
Q 019196          202 SVIPSVKEFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       202 ~~~~~~~~~~~~~--~~~~~d~vid~~g~  228 (344)
                      +. +.++++....  ..+++|+++|++|.
T Consensus       120 d~-~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SD-EIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SH-HHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CH-HHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            22 2233332221  23479999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.18  E-value=0.0016  Score=55.11  Aligned_cols=81  Identities=20%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHH---HHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  |++|..+++.+...|++|++++++.+   ..+.+. +.+....+..+-.+. +.++++.+..  ...
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999998  89999999988888999999998865   233332 234333333332222 2233322211  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        86 ~iD~lv~~Ag   95 (261)
T 2wyu_A           86 GLDYLVHAIA   95 (261)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.18  E-value=0.0014  Score=54.74  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=51.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCHHHHHHH----HhcCCc-EE-EeCCCCCchhhHHHHHHHh--cCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HV-VDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~----~~~g~~-~v-~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      +++||+|++|++|..+++.+...|++|+++ .++.++.+.+    +..+.. .. +..+-.+. +.+++..+..  ...+
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA-EAATALVHQAAEVLGG   80 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSH-HHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCH-HHHHHHHHHHHHhcCC
Confidence            579999999999999999998899999998 7877765543    223432 22 33322222 2233332211  1246


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.17  E-value=0.0028  Score=53.67  Aligned_cols=108  Identities=17%  Similarity=0.244  Sum_probs=69.3

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--c
Q 019196          144 LSSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       144 ~~~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      ...+++|||+|++  +++|..+++.+...|++|++++++....+.+    ++.+....+..+-.+. +.++++.+..  .
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADD-AQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCH-HHHHHHHHHHHHH
Confidence            3467899999998  9999999999989999999998875433333    2344333333332222 2233333221  1


Q ss_pred             CCCccEEEeCCChh-------------------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          216 LKGVDVLYDPVGGK-------------------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       216 ~~~~d~vid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ..++|++|+++|..                               ..+.++..++++|+++.++....
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  157 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  157 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc
Confidence            24799999998731                               01334456667899999886543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.16  E-value=0.001  Score=55.14  Aligned_cols=103  Identities=18%  Similarity=0.287  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ......++.+||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++    .|...-+.....+..+...   ...
T Consensus        48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~  122 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE---KLE  122 (233)
T ss_dssp             HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH---HHT
T ss_pred             HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH---hcc
Confidence            3444567889999997 4 788899999887 6799999999988777754    3432111111222211111   111


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEE
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (344)
                      ....||+|+.....    ..+..+.+.|+++|.++..
T Consensus       123 ~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          123 LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            13579999876553    4557788999999999875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.16  E-value=0.0019  Score=53.02  Aligned_cols=93  Identities=22%  Similarity=0.197  Sum_probs=62.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|||+|++|.+|..++..+...|.+|++++++.++...+...+.. ++..+-.+...      ...  .++|+||+|++.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~D~~d~~~------~~~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVA-TLVKEPLVLTE------ADL--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSE-EEECCGGGCCH------HHH--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCce-EEecccccccH------hhc--ccCCEEEECCcc
Confidence            599999999999999999988899999999998876655433433 33322222211      111  478999999975


Q ss_pred             h-----------hHHHHHhcccC-CCEEEEEecc
Q 019196          229 K-----------LTKESLKLLNW-GAQILVIGFA  250 (344)
Q Consensus       229 ~-----------~~~~~~~~l~~-~G~~v~~g~~  250 (344)
                      .           ....+++.++. +++++.++..
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence            1           12445555544 4688888643

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.16  E-value=0.011  Score=47.57  Aligned_cols=98  Identities=15%  Similarity=0.262  Sum_probs=69.6

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCc--EEEeCCCCCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~  212 (344)
                      ....++++++||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++    .|.+  .++..+..+.   .     
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~-----  103 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---L-----  103 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---C-----
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---h-----
Confidence            5667889999999997 4 588888998875 3699999999988777754    3432  2222222111   0     


Q ss_pred             HhcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||+|+.....    ..+..+.+.|+++|+++...
T Consensus       104 -~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          104 -DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             -TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             -hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence             012469999987652    46688889999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.16  E-value=0.0034  Score=54.79  Aligned_cols=80  Identities=26%  Similarity=0.347  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec---------CHHHHHHH----HhcCCcEEEeCCCCCch-hhHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---------GAEKIKFL----KSLGVDHVVDLSNESVI-PSVKEFL  211 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~---------~~~~~~~~----~~~g~~~v~~~~~~~~~-~~~~~~~  211 (344)
                      .++++||+|++|++|..+++.+...|++|+++++         +.++.+.+    +..+...+.|..+.... +..+++.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            4689999999999999999999889999998643         44444322    33454455666554431 1122222


Q ss_pred             HHhcCCCccEEEeCCC
Q 019196          212 KARKLKGVDVLYDPVG  227 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (344)
                      +.  ..++|++|+++|
T Consensus        88 ~~--~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DT--FGRIDVVVNNAG  101 (319)
T ss_dssp             HH--TSCCCEEEECCC
T ss_pred             HH--cCCCCEEEECCC
Confidence            22  247999999987

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.15  E-value=0.004  Score=52.41  Aligned_cols=103  Identities=15%  Similarity=0.194  Sum_probs=72.4

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc----EEEeCCCCCchhhHHHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD----HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.....++++.+||-+|+  |.|..+..+++..+++|++++.+++..+.+++....    .+...+-.+.         .
T Consensus        47 ~~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~---------~  115 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK---------E  115 (266)
T ss_dssp             HTTTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC---------C
T ss_pred             HHHhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC---------C
Confidence            335566788999999997  478888899987789999999999988888765422    2222221111         0


Q ss_pred             hcCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEeccC
Q 019196          214 RKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       214 ~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .....||+|+.+..-         ..+..+.+.|+|+|.++......
T Consensus       116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  162 (266)
T 3ujc_A          116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA  162 (266)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence            123579999975432         23577889999999999876543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.15  E-value=0.002  Score=54.80  Aligned_cols=88  Identities=19%  Similarity=0.245  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCC--cEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGV--DHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+ ++++.  .....+.+  .           ....+|+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~--l-----------~~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA--L-----------EGQSFDI  184 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG--G-----------TTCCCSE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH--h-----------cccCCCE
Confidence            5789999999 9999999999999997 999999998876654 45543  12222211  1           0157999


Q ss_pred             EEeCCChhhHHH----HHhcccCCCEEEEE
Q 019196          222 LYDPVGGKLTKE----SLKLLNWGAQILVI  247 (344)
Q Consensus       222 vid~~g~~~~~~----~~~~l~~~G~~v~~  247 (344)
                      ||+|++......    -...++++..++++
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            999998543211    12445666555554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.14  E-value=0.0074  Score=53.17  Aligned_cols=77  Identities=17%  Similarity=0.165  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH----HHHHHHhc------CCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLKSL------GVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~------g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++..    ....++..      ..-..+..+-.+    ...+.... 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~-   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD----LTTCEQVM-   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC----HHHHHHHT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC----HHHHHHHh-
Confidence            3578999999999999999999889999999998543    33333332      222333333222    23333333 


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                       .++|+||+|++.
T Consensus        99 -~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 -KGVDHVLHQAAL  110 (351)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -cCCCEEEECCcc
Confidence             279999999973

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.13  E-value=0.0013  Score=56.05  Aligned_cols=81  Identities=23%  Similarity=0.313  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.+.+    +..+.. ..+..+-.+. +.+.++.+..  ....
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP-KSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH-HHHHHHHHHHHHHhCC
Confidence            467899999999999999998888899999999886654433    223433 2232222221 2222222211  1136


Q ss_pred             ccEEEeCCC
Q 019196          219 VDVLYDPVG  227 (344)
Q Consensus       219 ~d~vid~~g  227 (344)
                      +|++|+++|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            999999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.12  E-value=0.0022  Score=54.13  Aligned_cols=82  Identities=18%  Similarity=0.278  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH-HHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++.. .++    +.+... .+..+-.+. +.++++.+..  ...
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT-DIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCH-HHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCH-HHHHHHHHHHHHhcC
Confidence            4578999999999999999999889999999998654332 222    224332 222222221 2233332221  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        92 ~id~li~~Ag~  102 (265)
T 1h5q_A           92 PISGLIANAGV  102 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.12  E-value=0.0059  Score=53.09  Aligned_cols=103  Identities=15%  Similarity=0.208  Sum_probs=70.4

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.....+.++.+||-+|+ | .|..+..+++..|++|++++.+++..+.+++.    |...-+.....+..    ++   
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~---  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE----DF---  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG----GC---
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH----HC---
Confidence            345667789999999997 4 48888899988799999999999988777543    32111111111221    00   


Q ss_pred             hcCCCccEEEeC-----CCh----hhHHHHHhcccCCCEEEEEeccC
Q 019196          214 RKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       214 ~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        ...||+|+..     .+.    ..+..+.+.|+|+|+++......
T Consensus       153 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  197 (318)
T 2fk8_A          153 --AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS  197 (318)
T ss_dssp             --CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred             --CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence              1579999876     332    34577889999999998866543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.11  E-value=0.0011  Score=56.24  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++     . +....+..+-.+. +.+++..+..  ...++|+++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~-~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----E-AKYDHIECDVTNP-DQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----S-CSSEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----C-CceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            36789999999999999999999999999999987654     1 1112222222221 1222222211  113699999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus        80 ~~Ag   83 (264)
T 2dtx_A           80 NNAG   83 (264)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.11  E-value=0.0012  Score=54.36  Aligned_cols=95  Identities=24%  Similarity=0.269  Sum_probs=60.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|||+|++|.+|..+++.+...|.+|+++++++++...+.  .....+..+-.+    .+.+.+..  .++|+||+|++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d----~~~~~~~~--~~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSS----LDEVCEVC--KGADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTC----HHHHHHHH--TTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCC----HHHHHHHh--cCCCEEEEeCc
Confidence            57999999999999999999999999999999977543221  111222222222    22333333  36999999987


Q ss_pred             hh------------hHHHHHhcccCC--CEEEEEecc
Q 019196          228 GK------------LTKESLKLLNWG--AQILVIGFA  250 (344)
Q Consensus       228 ~~------------~~~~~~~~l~~~--G~~v~~g~~  250 (344)
                      ..            .....++.++..  ++++.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            52            113344444443  378887754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.10  E-value=0.00042  Score=58.05  Aligned_cols=78  Identities=21%  Similarity=0.301  Sum_probs=49.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHH--HHHH-HhcCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK--EFLK-ARKLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~~-~~~~~~~d~vi  223 (344)
                      ++++||+|++|++|..+++.+.. |++|++++++.++.+.+.+......+..+   ..+...  ...+ .....++|+++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESD---IVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECC---HHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecc---cchHHHHHHHHHHHHhcCCCCEEE
Confidence            67899999999999999988765 89999999998887777664322233222   100000  0000 01124699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        81 ~~Ag~   85 (245)
T 3e9n_A           81 HAAAV   85 (245)
T ss_dssp             ECC--
T ss_pred             ECCCc
Confidence            99984

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.09  E-value=0.0025  Score=54.12  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=51.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      -..+++|||+|+++++|.++++.+...|++|++++++.++..     +....+..+-.+. +.+.++.+..  ...++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNE-EEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCH-HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            346889999999999999999999989999999998765431     1222333222222 1223222211  1237999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.08  E-value=0.0044  Score=57.77  Aligned_cols=82  Identities=15%  Similarity=0.237  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHH-------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK-------IKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      +++++++||+|++|++|..++..+...|+ +|++++++..+       .+.++..|....+..-+....+.+.++...  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            46789999999999999999998888899 68888887531       123344564432221222222234444433  


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                       ..+|.||+|.|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             569999999873

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.08  E-value=0.0015  Score=54.37  Aligned_cols=106  Identities=13%  Similarity=0.208  Sum_probs=68.2

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH-
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA-  213 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~-  213 (344)
                      .....++.+||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|....+.....+..+........ 
T Consensus        55 l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           55 LTKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCS
T ss_pred             HHHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhc
Confidence            344567889999997  4699999999987  5799999999987777754    344221111122221111111100 


Q ss_pred             --------hc-C-CCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          214 --------RK-L-KGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 --------~~-~-~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                              .. . ..||+|+.....    ..+..+.+.|+++|.++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                    00 1 579999987664    34577889999999998743

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.06  E-value=0.0016  Score=55.00  Aligned_cols=81  Identities=11%  Similarity=0.178  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.+ ..+.+++    .+.. ..+..+-.+. +.+.++.+..  ...
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK-EDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            3578999999999999999999889999999866644 3333332    2222 2222222222 2233332221  123


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++|+++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            6999999998

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.06  E-value=0.0094  Score=46.72  Aligned_cols=100  Identities=18%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCc-E-EEeCCCCCchhhHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVD-H-VVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~-~-v~~~~~~~~~~~~~~~~~  212 (344)
                      ....++++.+||-+|+ | .|..+..+++.. +.+|++++.+++..+.+++    .+.. . .+..+....   ..    
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---~~----   89 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRA---FD----   89 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGG---GG----
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhh---hh----
Confidence            4556788999999997 4 489999998876 5699999999988777753    3443 2 222221111   11    


Q ss_pred             HhcCCCccEEEeCCCh---hhHHHHHhcccCCCEEEEEec
Q 019196          213 ARKLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  249 (344)
                       .....||+|+.....   ..+..+.+.|+++|+++....
T Consensus        90 -~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           90 -DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             -GCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             -ccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence             011579999976654   357889999999999987653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.06  E-value=0.0019  Score=55.40  Aligned_cols=81  Identities=16%  Similarity=0.233  Sum_probs=52.1

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHH---HHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++  |++|..+++.+...|++|++++++.+   ..+.+. +.+....+..+-.+. +.++++.+..  ...
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLD-EDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence            46789999998  89999999999889999999998864   233332 234222333322222 2233332221  124


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      ++|++++++|
T Consensus        99 ~iD~lv~~Ag  108 (285)
T 2p91_A           99 SLDIIVHSIA  108 (285)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.06  E-value=0.0049  Score=53.62  Aligned_cols=89  Identities=19%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+|.|+|. |.+|...++.++..|.  +|++.++++++.+.+++.|.......+..+ .            -...|+||.
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~------------~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVE------------DFSPDFVML  100 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGG------------GGCCSEEEE
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHh------------hccCCEEEE
Confidence            58999998 9999999999999998  999999999999988888863211111111 1            136899999


Q ss_pred             CCChhh----HHHHHhcccCCCEEEEEec
Q 019196          225 PVGGKL----TKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~~----~~~~~~~l~~~G~~v~~g~  249 (344)
                      |+....    +......++++..++.++.
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            998743    3445566778877777653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.04  E-value=0.0035  Score=53.77  Aligned_cols=75  Identities=20%  Similarity=0.305  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc----CCc-EEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL----GVD-HVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .++++||+|++|++|.+++..+...|++|+++.++.++.+.+ +++    +.. ...+..+.      +.+.+..  ..+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~------~~~~~~~--~~~  189 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD------ASRAEAV--KGA  189 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH------HHHHHHT--TTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH------HHHHHHH--HhC
Confidence            578999999889999999999999999999999988766544 222    221 22343322      2222222  348


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++|+|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999974

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.04  E-value=0.0014  Score=54.60  Aligned_cols=101  Identities=18%  Similarity=0.203  Sum_probs=63.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d~  221 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++..     +....+. -+....+.++++.+    ..+..++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~-~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVK-MTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECC-CCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEE-cCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            4678999999999999999999989999999998865432     1111111 11111122333222    221147999


Q ss_pred             EEeCCCh--------h-------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          222 LYDPVGG--------K-------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       222 vid~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++++|.        +                   ..+.++..++++|+++.++....
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~  137 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  137 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH
Confidence            9999872        1                   01334455656789999886543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.01  E-value=0.003  Score=54.81  Aligned_cols=74  Identities=16%  Similarity=0.264  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC---HHHHHHH-Hhc----CCc-EEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG---AEKIKFL-KSL----GVD-HVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~---~~~~~~~-~~~----g~~-~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .++++||+|+ |++|.+++..+...|+ +|+++.++   .++.+.+ +++    +.. .+.++.+.      .++.... 
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~------~~l~~~l-  224 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH------EQLRKEI-  224 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH------HHHHHHH-
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH------HHHHhhh-
Confidence            5789999999 9999999999999999 89999998   6665544 232    221 23333321      1121111 


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                       ..+|+||+|++.
T Consensus       225 -~~aDiIINaTp~  236 (315)
T 3tnl_A          225 -AESVIFTNATGV  236 (315)
T ss_dssp             -HTCSEEEECSST
T ss_pred             -cCCCEEEECccC
Confidence             258999999974

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.00  E-value=0.0015  Score=54.31  Aligned_cols=101  Identities=21%  Similarity=0.294  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      +...+.++++||.+|+ | .|..+..+++..+.+|++++.+++..+.+++    .|...+ .....+.....      ..
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~------~~  155 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILGDGSKGF------PP  155 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCC------GG
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECCcccCC------CC
Confidence            5567889999999997 4 7999999998877899999999887777754    343221 11111110000      11


Q ss_pred             CCCccEEEeCCChh-hHHHHHhcccCCCEEEEEec
Q 019196          216 LKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       216 ~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ..+||+|+.+.... ....+.+.|+++|+++..-.
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            23599999877653 44678899999999887543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.99  E-value=0.0013  Score=55.04  Aligned_cols=100  Identities=19%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCHH-HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++++||+|+++++|..+++.+.. .|++|++++++.+ +.+      ....+..+-.+ .+.+.++.+.....++|+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~------~~~~~~~Dv~~-~~~v~~~~~~~~~~~id~lv   75 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE------NLKFIKADLTK-QQDITNVLDIIKNVSFDGIF   75 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT------TEEEEECCTTC-HHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc------cceEEecCcCC-HHHHHHHHHHHHhCCCCEEE
Confidence            467899999999999999977766 6888988887654 111      11223222222 22344444444445799999


Q ss_pred             eCCChh-----------h---------------HHHHHhcccCCCEEEEEeccCC
Q 019196          224 DPVGGK-----------L---------------TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       224 d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++|..           .               .+.++..++++|+++.++....
T Consensus        76 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           76 LNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            999841           0               1233455666789999876543

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.98  E-value=0.0053  Score=50.01  Aligned_cols=99  Identities=21%  Similarity=0.312  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCCcE--EEeCCCCCchhhHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDH--VVDLSNESVIPSVKEFL  211 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~~  211 (344)
                      ....+.++.+||.+|+ | .|..+..+++..+  .+|++++.+++..+.+++    .+...  +...+....   .    
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~----  141 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLG---Y----  141 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGC---C----
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC---C----
Confidence            5667889999999997 4 6999999998876  799999999987777754    24321  222111110   0    


Q ss_pred             HHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  249 (344)
                        .....||+|+.+.... ..+.+.+.|+++|+++..-.
T Consensus       142 --~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          142 --EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             --GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             --CCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence              1134699999876653 34678899999999987643

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.98  E-value=0.0032  Score=57.62  Aligned_cols=90  Identities=22%  Similarity=0.222  Sum_probs=69.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      -.+++|.|+|. |.+|..+++.++.+|++|++++++..+...+...|+. +.     +    +++..     ...|+|+.
T Consensus       255 l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~-----~----l~ell-----~~aDiVi~  318 (479)
T 1v8b_A          255 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----T----LDEIV-----DKGDFFIT  318 (479)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----C----HHHHT-----TTCSEEEE
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec-----C----HHHHH-----hcCCEEEE
Confidence            46889999999 9999999999999999999999998765455566652 11     1    23321     46899999


Q ss_pred             CCChh-hH-HHHHhcccCCCEEEEEecc
Q 019196          225 PVGGK-LT-KESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       225 ~~g~~-~~-~~~~~~l~~~G~~v~~g~~  250 (344)
                      +++.. .+ ...+..|+++..++.++..
T Consensus       319 ~~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          319 CTGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             CCChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            97653 33 5678899999999998754

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.98  E-value=0.00092  Score=58.64  Aligned_cols=80  Identities=18%  Similarity=0.142  Sum_probs=50.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH---H-HHHHhc------CCc-EEEeCCCCCchhhHHHHHHHhc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK---I-KFLKSL------GVD-HVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~---~-~~~~~~------g~~-~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ++++||+|++|++|..++..+...|++|+++.++.++   . +.++..      +.. ..+..+-.+ .+.+.++.+...
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCC-HHHHHHHHHHHh
Confidence            5689999999999999999999999987776654322   1 222222      222 223222222 233444544433


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      ...+|++|+++|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            457999999987

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.98  E-value=0.0068  Score=56.14  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=55.3

Q ss_pred             CCC--CEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHH-------HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          145 SSG--QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE-------KIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       145 ~~~--~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~-------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      +++  +++||+|++|++|..+++.+...|+ +|+++.++..       -.+.+++.|....+..-+..-.+.+.++....
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            455  8999999999999999998888899 7888887632       12334556654433222222233355555433


Q ss_pred             c-CCCccEEEeCCCh
Q 019196          215 K-LKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~-~~~~d~vid~~g~  228 (344)
                      . ..++|.+|++.|.
T Consensus       315 ~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          315 PEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCeEEEECCcc
Confidence            2 2479999999873

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.97  E-value=0.0017  Score=54.21  Aligned_cols=74  Identities=20%  Similarity=0.112  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+++|||+|++|.+|..+++.+...  |++|+++++++++.+.+ ..+.. .+..+-.+    .+.+.+..  .++|++|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~-~~~~D~~d----~~~~~~~~--~~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEAD-VFIGDITD----ADSINPAF--QGIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTT-EEECCTTS----HHHHHHHH--TTCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCee-EEEecCCC----HHHHHHHH--cCCCEEE
Confidence            3578999999999999999988888  78999999987765433 11222 22222222    22333333  3589999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +|++
T Consensus        75 ~~a~   78 (253)
T 1xq6_A           75 ILTS   78 (253)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9987

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.97  E-value=0.0035  Score=52.62  Aligned_cols=101  Identities=16%  Similarity=0.239  Sum_probs=71.3

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++    .|....+.....+..+       
T Consensus        86 ~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-------  156 (255)
T 3mb5_A           86 VAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-------  156 (255)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-------
T ss_pred             HHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-------
Confidence            35677889999999997 4 488899999885  5799999999988777754    3432211111222211       


Q ss_pred             HhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ......||+|+...+.  ..+..+.+.|+++|+++...
T Consensus       157 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          157 GIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            1233569999987765  36788999999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.00085  Score=56.78  Aligned_cols=77  Identities=17%  Similarity=0.260  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..++..+...|++|++++++.++....   . ...+..+-.+. +.++++.+..  ...++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~-~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---D-IHTVAGDISKP-ETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---T-EEEEESCTTSH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---c-eEEEEccCCCH-HHHHHHHHHHHHHCCCCCEEE
Confidence            467899999999999999999999999999999876532211   1 12222222221 2233322211  123699999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      +++|
T Consensus       102 ~nAg  105 (260)
T 3un1_A          102 NNAG  105 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.97  E-value=0.0029  Score=58.18  Aligned_cols=90  Identities=20%  Similarity=0.225  Sum_probs=68.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      -.+++|.|+|. |.+|..+++.++.+|++|++++++..+...+...|+.. .     +    ++++.     ...|+|+.
T Consensus       275 L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~-----~----l~ell-----~~aDiVi~  338 (494)
T 3d64_A          275 IAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-V-----T----MEYAA-----DKADIFVT  338 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-C-----C----HHHHT-----TTCSEEEE
T ss_pred             cCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-C-----C----HHHHH-----hcCCEEEE
Confidence            46889999999 99999999999999999999999987654445556532 1     1    23321     46899999


Q ss_pred             CCChh-hH-HHHHhcccCCCEEEEEecc
Q 019196          225 PVGGK-LT-KESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       225 ~~g~~-~~-~~~~~~l~~~G~~v~~g~~  250 (344)
                      +++.. .+ ...+..|+++..++.++..
T Consensus       339 ~~~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          339 ATGNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CSSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             CCCcccccCHHHHhhCCCCcEEEEcCCC
Confidence            98653 33 5688999999999988753

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.96  E-value=0.0056  Score=52.27  Aligned_cols=89  Identities=19%  Similarity=0.137  Sum_probs=63.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCC-CccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLK-GVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~-~~d~vid  224 (344)
                      .+|.|+|+ |.+|...++.++..|.  +|++.++++++.+.+++.|...... .  +..    +.     -. ..|+|+.
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-~--~~~----~~-----~~~~aDvVil   68 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-T--SIA----KV-----EDFSPDFVML   68 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-S--CGG----GG-----GGTCCSEEEE
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-C--CHH----HH-----hcCCCCEEEE
Confidence            36899998 9999999999998887  8999999999888888888642111 1  110    00     13 6899999


Q ss_pred             CCChhhH----HHHHhcccCCCEEEEEec
Q 019196          225 PVGGKLT----KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~~~----~~~~~~l~~~G~~v~~g~  249 (344)
                      |++....    ......++++..++.++.
T Consensus        69 avp~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           69 SSPVRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             CSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             cCCHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            9987433    344456777777766553

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.96  E-value=0.0035  Score=52.61  Aligned_cols=98  Identities=22%  Similarity=0.303  Sum_probs=65.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vid  224 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.++...       ..+..+-.+ .+.++++.+..  ...++|++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-------~~~~~d~~d-~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------HSFTIKDSG-EEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-------EEEECSCSS-HHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-------cceEEEeCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            6789999999999999999999999999999998764321       122222222 12233333322  2347999999


Q ss_pred             CCCh--------h-------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          225 PVGG--------K-------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       225 ~~g~--------~-------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      ++|.        +                   ..+.++..++++|+++.++....
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            9882        0                   02344556677899999886543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.96  E-value=0.015  Score=43.49  Aligned_cols=75  Identities=15%  Similarity=0.228  Sum_probs=53.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      .+|+|+|+ |.+|...++.+...|.+|+++++++++.+.+++ ++.. .+..+..+    ...+ ....-.++|+++.|+
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~~----~~~l-~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTK----IKTL-EDAGIEDADMYIAVT   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTS----HHHH-HHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCCC----HHHH-HHcCcccCCEEEEee
Confidence            47999998 999999999998899999999999887776653 4643 33222222    1222 222234799999999


Q ss_pred             Chh
Q 019196          227 GGK  229 (344)
Q Consensus       227 g~~  229 (344)
                      +..
T Consensus        78 ~~~   80 (140)
T 1lss_A           78 GKE   80 (140)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            864

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.95  E-value=0.0059  Score=55.16  Aligned_cols=87  Identities=17%  Similarity=0.153  Sum_probs=53.1

Q ss_pred             hcCCCCCCEEEEecCCChHHHH--HHHHHHHcCCeEEEEecCHH---------------HH-HHHHhcCCcE-EEeCCCC
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVA--AVQIGKVCGATIIAVARGAE---------------KI-KFLKSLGVDH-VVDLSNE  201 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~--~~~~~~~~g~~v~~~~~~~~---------------~~-~~~~~~g~~~-v~~~~~~  201 (344)
                      ...+..++++||+|+++++|++  .+..+...|++|++++++.+               .. +.+++.|... .+..+-.
T Consensus        54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            3445778999999999999998  55555556999999887532               22 2334556443 2222222


Q ss_pred             CchhhHHHHHHHh--cCCCccEEEeCCCh
Q 019196          202 SVIPSVKEFLKAR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       202 ~~~~~~~~~~~~~--~~~~~d~vid~~g~  228 (344)
                      +. +.++++.+..  ..+++|++++++|.
T Consensus       134 d~-~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SN-ETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CH-HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CH-HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            22 2233333221  23479999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.94  E-value=0.0046  Score=52.39  Aligned_cols=82  Identities=18%  Similarity=0.146  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .++++||+|++|++|..+++.+...|++|+++. ++.++.+..    ++.+.. ..+..+-.+. +.+.++.+..  ...
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANR-EQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHhC
Confidence            357899999999999999999999999987654 555444332    233332 2333322222 2233322211  124


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.94  E-value=0.0047  Score=52.69  Aligned_cols=70  Identities=19%  Similarity=0.252  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCC---cEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGV---DHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+ ++++.   .....+.+.              ...+|
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l--------------~~~aD  189 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQL--------------KQSYD  189 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CSCEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHh--------------cCCCC
Confidence            5789999999 9999999999998997 999999998876554 44442   122222111              14799


Q ss_pred             EEEeCCChhh
Q 019196          221 VLYDPVGGKL  230 (344)
Q Consensus       221 ~vid~~g~~~  230 (344)
                      +||+|++...
T Consensus       190 iIInaTp~gm  199 (281)
T 3o8q_A          190 VIINSTSASL  199 (281)
T ss_dssp             EEEECSCCCC
T ss_pred             EEEEcCcCCC
Confidence            9999998643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.93  E-value=0.005  Score=52.02  Aligned_cols=85  Identities=22%  Similarity=0.259  Sum_probs=61.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++++|+|+ |++|.+++..+...|.+|++..|+.++.+.+.+++.. ...+.+  .             ..+|+||+|+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~--l-------------~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPP--K-------------SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCC--S-------------SCCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHH--h-------------ccCCEEEEcc
Confidence            789999999 9999999999999999999999998887655577742 332221  1             1699999998


Q ss_pred             Chh-----hH-HH-HHhcccCCCEEEEEe
Q 019196          227 GGK-----LT-KE-SLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~~-----~~-~~-~~~~l~~~G~~v~~g  248 (344)
                      +..     .+ .. ....++++..++++.
T Consensus       181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          181 SASLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             TTCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             cCCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence            752     12 12 222566777776654

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.92  E-value=0.0026  Score=53.38  Aligned_cols=101  Identities=15%  Similarity=0.242  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh-
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      ....++.+||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+.    .+..... 
T Consensus        59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~----~~~l~~~~  132 (248)
T 3tfw_A           59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA----LQSLESLG  132 (248)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH----HHHHHTCC
T ss_pred             HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH----HHHHHhcC
Confidence            34557889999997  4588888999876  5699999999988777754    35331111111222    2222221 


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+|+-....    ..++.+.+.|+|+|.++.-.
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          133 ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            23479999954443    35677889999999888744

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.92  E-value=0.0018  Score=52.26  Aligned_cols=63  Identities=29%  Similarity=0.429  Sum_probs=45.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ++||+|++|++|..+++.+. .|++|++++++.+          ....|..+.   +.++++.+..  .++|++|+|+|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~---~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNI---DSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCH---HHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCH---HHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999999888 8999999998754          122233322   2234443333  46899999987

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.91  E-value=0.0076  Score=52.00  Aligned_cols=103  Identities=16%  Similarity=0.151  Sum_probs=71.5

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.....++++.+||-+|+  |.|..+..+++..|++|++++.+++..+.+++    .|...-+.....+..    ++   
T Consensus        64 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~---  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE----EF---  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG----GC---
T ss_pred             HHHHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH----Hc---
Confidence            346667889999999997  45899999999888999999999988777754    343211111112221    11   


Q ss_pred             hcCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEeccC
Q 019196          214 RKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       214 ~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        ...||+|+....-                ..+..+.+.|+|+|+++......
T Consensus       135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  186 (302)
T 3hem_A          135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI  186 (302)
T ss_dssp             --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred             --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence              3579999864321                34577889999999999876543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.90  E-value=0.0054  Score=57.38  Aligned_cols=85  Identities=14%  Similarity=0.107  Sum_probs=54.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEE-ecCH-------------HH----HHHHHhcCCcEEEeCCCCCch
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAV-ARGA-------------EK----IKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~-~~~~-------------~~----~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      +++++++||+|++|++|..+++.+...|++ ++.+ .++.             ++    .+.+++.|....+-.-+....
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            567899999999999999999888888996 6666 6662             21    233345565433322222222


Q ss_pred             hhHHHHHHHh-cCCCccEEEeCCCh
Q 019196          205 PSVKEFLKAR-KLKGVDVLYDPVGG  228 (344)
Q Consensus       205 ~~~~~~~~~~-~~~~~d~vid~~g~  228 (344)
                      +.+.++.... ...++|.+|+|+|.
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcC
Confidence            3344454433 23469999999883

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.90  E-value=0.0042  Score=52.58  Aligned_cols=96  Identities=16%  Similarity=0.152  Sum_probs=65.6

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||....+...+.+..---.|++++|+|.++.+|..++.++...|++|++..+...                   +    
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~-------------------~----  196 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK-------------------D----  196 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------C----
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch-------------------h----
Confidence            44444444444432222237899999999667999999999999999888765321                   1    


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++..     ..+|++|.++|.+.+ ---++++++..++++|...
T Consensus       197 L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          197 LSLYT-----RQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHHH-----TTCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHHHh-----hcCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            22221     468999999997644 2236789999999998653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.89  E-value=0.0098  Score=53.75  Aligned_cols=95  Identities=17%  Similarity=0.248  Sum_probs=70.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +.+|+|.|. |.+|..+++.++..|..|++++.++++.+.+++.|...++ .+..+     .++++..+-..+|+++-|+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~-----~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATR-----MDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTC-----HHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCC-----HHHHHhcCCCccCEEEECC
Confidence            456999999 9999999999999999999999999999999988875433 33322     2344445556899999999


Q ss_pred             ChhhH----HHHHhcccCCCEEEEEe
Q 019196          227 GGKLT----KESLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~~~~----~~~~~~l~~~G~~v~~g  248 (344)
                      +.+..    -...+.+.+.-+++...
T Consensus        77 ~~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            87432    33445666776776654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.88  E-value=0.0032  Score=53.32  Aligned_cols=83  Identities=20%  Similarity=0.301  Sum_probs=51.5

Q ss_pred             CCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHHHH-----HHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~-----~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++++||+|++  +++|..+++.+...|++|++++++.++.     +.++ ..+....+-.-+....+.++++.+..  .
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            46899999998  8999999999988999999988774322     2222 23433222111222222233332221  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      ..++|++|+++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999873

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.88  E-value=0.0071  Score=52.13  Aligned_cols=91  Identities=22%  Similarity=0.153  Sum_probs=61.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCCc--EEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+ ++++..  .+.+         ..++....  ..+|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---------~~~~~~~~--~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---------LAEAETRL--AEYDI  207 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---------HHHHHHTG--GGCSE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---------HHHHHhhh--ccCCE
Confidence            5789999999 9999999999999998 999999998876544 566542  1221         12222222  46999


Q ss_pred             EEeCCChhhHH------HHHhcccCCCEEEEEe
Q 019196          222 LYDPVGGKLTK------ESLKLLNWGAQILVIG  248 (344)
Q Consensus       222 vid~~g~~~~~------~~~~~l~~~G~~v~~g  248 (344)
                      |++|++.....      .....++++..++++.
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            99999864321      1124566666666654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.88  E-value=0.0042  Score=52.04  Aligned_cols=77  Identities=18%  Similarity=0.212  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.+.    ++.+ ...+..+-.+. +.+.++.+..  ...++|+++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~-~~~~~~D~~d~-~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYP-FATEVMDVADA-AQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCS-SEEEECCTTCH-HHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCC-ceEEEcCCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999999999999999987652    2233 22332222222 2233332211  124799999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.87  E-value=0.005  Score=52.08  Aligned_cols=96  Identities=20%  Similarity=0.181  Sum_probs=65.2

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||....+...+.+..---.|++++|+|.++-+|..+++++...|++|++..+...                   +    
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~-------------------~----  197 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------D----  197 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------S----
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------h----
Confidence            44444444444432222237889999999666899999999999999887754311                   1    


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++..     ..+|++|.++|.+.+ --.++++++..++++|...
T Consensus       198 L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          198 LKSHT-----TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HHHHH-----TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             HHHhc-----ccCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence            22221     468999999997644 2236789999999988553

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.87  E-value=0.0095  Score=47.58  Aligned_cols=99  Identities=16%  Similarity=0.104  Sum_probs=62.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcC----------CeEEEEecCHHHHHHHHhcCCcEEE-eCCCCCchhhHHHH
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG----------ATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEF  210 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g----------~~v~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~  210 (344)
                      ..++++++||-+|+ |. |..+..+++..+          .+|++++.++..     .......+ ..+-... .....+
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~~-~~~~~~   89 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTDP-RTSQRI   89 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTSH-HHHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCCH-HHHHHH
Confidence            34688999999998 55 999999999876          789999988742     01111222 2211111 112222


Q ss_pred             HHHhcCCCccEEEe-----CCCh-------------hhHHHHHhcccCCCEEEEEe
Q 019196          211 LKARKLKGVDVLYD-----PVGG-------------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       211 ~~~~~~~~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .....+..||+|+.     +++.             ..+..+.+.|+|+|+++...
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            33334457999994     3332             23566789999999998764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.85  E-value=0.0081  Score=52.94  Aligned_cols=77  Identities=19%  Similarity=0.178  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CC-eEEEEecCHHHHHHHH-hcC--CcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVC-GA-TIIAVARGAEKIKFLK-SLG--VDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~-g~-~v~~~~~~~~~~~~~~-~~g--~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+++|||+||+|.+|..+++.+... |+ +|+++++++++...+. .+.  .-..+..+-.+    ...+.+..  .++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~l~~~~--~~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD----LERLNYAL--EGVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC----HHHHHHHT--TTCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC----HHHHHHHH--hcCC
Confidence            4679999999999999999888877 98 9999999987765553 332  11222222222    22333333  3799


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +||.+++.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.85  E-value=0.003  Score=55.37  Aligned_cols=76  Identities=24%  Similarity=0.243  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-----CCc-EEE---eCCCCCchhhHHHHHHHhc
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-----GVD-HVV---DLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-----g~~-~v~---~~~~~~~~~~~~~~~~~~~  215 (344)
                      -.+.+|||+|++|.+|..++..+...|++|++++++.++.+.+.+.     +.. ..+   |..+.+.   +.++     
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~---~~~~-----   80 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA---YDEV-----   80 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT---TTTT-----
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH---HHHH-----
Confidence            3567999999999999999998888899999999988765544321     211 222   3333222   1111     


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      -.++|+||+|++.
T Consensus        81 ~~~~d~vih~A~~   93 (342)
T 1y1p_A           81 IKGAAGVAHIASV   93 (342)
T ss_dssp             TTTCSEEEECCCC
T ss_pred             HcCCCEEEEeCCC
Confidence            1279999999873

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.83  E-value=0.003  Score=55.44  Aligned_cols=79  Identities=11%  Similarity=0.093  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH----HHHh-cCCc-EEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK----FLKS-LGVD-HVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~----~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++..    .+.. .+.. ..+..+-. -.+.+.++.+.   .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~---~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVS-DERALARIFDA---HPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTT-CHHHHHHHHHH---SCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecC-CHHHHHHHHhc---cCC
Confidence            4568999999999999999999889999999988654322    2221 1222 22322222 21223333322   479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+||++++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.83  E-value=0.0038  Score=54.08  Aligned_cols=87  Identities=23%  Similarity=0.292  Sum_probs=66.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|...++.++..|++|++.+++.++ +.+.+.|+...      +    .+++.     ...|+|+.+
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~------~----l~ell-----~~aDvV~l~  203 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV------D----LETLL-----KESDVVTIH  203 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC------C----HHHHH-----HHCSEEEEC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc------C----HHHHH-----hhCCEEEEe
Confidence            4679999999 999999999999999999999998766 55667776321      1    23333     247999999


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++..     .+ ...+..+++++.++.++.
T Consensus       204 ~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          204 VPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             cCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            8741     23 467788999999988764

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.83  E-value=0.01  Score=48.78  Aligned_cols=98  Identities=12%  Similarity=0.176  Sum_probs=65.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCc-EEEeCCCCCchhhHHHHHHHhc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      +.+++.+||-+|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|.. .-+.....+.    .+......
T Consensus        53 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda----~~~l~~~~  126 (221)
T 3dr5_A           53 NGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRP----LDVMSRLA  126 (221)
T ss_dssp             CCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCH----HHHGGGSC
T ss_pred             CCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCH----HHHHHHhc
Confidence            3344559998885  7799999999976  6799999999987777743    4433 1112222222    22222222


Q ss_pred             CCCccEEEeCCCh----hhHHHHHhcccCCCEEEE
Q 019196          216 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       216 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (344)
                      ...||+||-....    ..++.+.+.|+|+|.++.
T Consensus       127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            4579999865443    356788899999999987

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.82  E-value=0.0073  Score=57.51  Aligned_cols=104  Identities=20%  Similarity=0.170  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH---------HHHH----HHHhcCCcEEEeCCCCCchh-hHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------EKIK----FLKSLGVDHVVDLSNESVIP-SVKEFL  211 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~---------~~~~----~~~~~g~~~v~~~~~~~~~~-~~~~~~  211 (344)
                      .++.+||+|+++++|.+.+..+...|++|++.+++.         ++.+    .+++.|...+.+..+....+ .++++.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999987643         3322    22344555566665544311 223333


Q ss_pred             HHhcCCCccEEEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccC
Q 019196          212 KARKLKGVDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFAS  251 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  251 (344)
                      +..  +++|+++|++|..                          ..+.++..|+  .+|++|.++...
T Consensus        87 ~~~--G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~a  152 (604)
T 2et6_A           87 KNF--GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA  152 (604)
T ss_dssp             HHH--SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             HHc--CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence            322  4699999999831                          1234455553  358999987643

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.82  E-value=0.0041  Score=57.07  Aligned_cols=79  Identities=25%  Similarity=0.405  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HH-HHHhcCCcEEE--eCCCCCchhhHHHHHHH---hcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IK-FLKSLGVDHVV--DLSNESVIPSVKEFLKA---RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~-~~~~~g~~~v~--~~~~~~~~~~~~~~~~~---~~~~  217 (344)
                      +++++||+|++|++|..+++.+...|++|++++++...  .+ ..++.+.. .+  |..+.+.   ++++...   ..+.
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~-~~~~Dvtd~~~---v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGT-ALTLDVTADDA---VDKITAHVTEHHGG  287 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCE-EEECCTTSTTH---HHHHHHHHHHHSTT
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEecCCHHH---HHHHHHHHHHHcCC
Confidence            46799999999999999999988889999998876432  22 22445543 33  3333333   3333322   2233


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      .+|++|+++|.
T Consensus       288 ~id~lV~nAGv  298 (454)
T 3u0b_A          288 KVDILVNNAGI  298 (454)
T ss_dssp             CCSEEEECCCC
T ss_pred             CceEEEECCcc
Confidence            49999999884

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.81  E-value=0.0064  Score=51.42  Aligned_cols=96  Identities=17%  Similarity=0.134  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||....+...|.+..---.|++++|+|.++-+|..++.++...|++|++..+...                   +    
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~-------------------~----  197 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR-------------------D----  197 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS-------------------C----
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc-------------------C----
Confidence            34444445544433222237899999999677999999999999999988764321                   1    


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++..     ..+|++|.++|.+.+ --.++++++..++.+|...
T Consensus       198 L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          198 LADHV-----SRADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHH-----HTCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             HHHHh-----ccCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence            22221     358999999997643 1236789999999998654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.81  E-value=0.0034  Score=52.83  Aligned_cols=76  Identities=21%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.      ...+..+-.+. +.++++.+..  ...++|+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~-~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDT-EQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSH-HHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            36789999999999999999999999999999987654321      22333222222 1222222211  234689999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98873

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.80  E-value=0.0049  Score=51.71  Aligned_cols=101  Identities=12%  Similarity=0.079  Sum_probs=70.3

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhc-----CCcEEEeCCCCCchhhHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL-----GVDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~~~~~~~~  211 (344)
                      .....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.     |.+.+ .....+..+.     
T Consensus        89 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~d~~~~-----  160 (258)
T 2pwy_A           89 VTLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLGKLEEA-----  160 (258)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEESCGGGC-----
T ss_pred             HHHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEECchhhc-----
Confidence            35667889999999997 4 488899999885  56999999999888777543     52221 1111111100     


Q ss_pred             HHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          212 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ......||+|+...+.  ..+..+.+.|+++|+++.+.
T Consensus       161 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 -ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence             0123469999976554  56788999999999998865

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.79  E-value=0.0091  Score=55.27  Aligned_cols=84  Identities=21%  Similarity=0.292  Sum_probs=55.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHH-------HHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK-------IKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~  214 (344)
                      ++++.++||+|++|++|..++..+...|+ +|++++++...       .+.++..|.... +..+-.+ .+.+.++....
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHHHH
Confidence            56789999999999999999988888899 58889887641       123345565432 2222222 22344444432


Q ss_pred             -cCCCccEEEeCCCh
Q 019196          215 -KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 -~~~~~d~vid~~g~  228 (344)
                       ....+|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence             22468999999883

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.79  E-value=0.0085  Score=48.53  Aligned_cols=99  Identities=11%  Similarity=0.067  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc--EEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~  212 (344)
                      .+...++++.+||-+|+ | .|..+..+++. +.+|++++.+++..+.+++    .+..  .+...+....   .     
T Consensus        70 ~~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~-----  138 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG---W-----  138 (210)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---C-----
T ss_pred             HHhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC---C-----
Confidence            35667889999999997 4 58888888887 8899999999988777754    3432  2222221111   0     


Q ss_pred             HhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEec
Q 019196          213 ARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  249 (344)
                       .....||+|+.+.... ..+.+.+.|+++|+++..-.
T Consensus       139 -~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~  175 (210)
T 3lbf_A          139 -QARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVG  175 (210)
T ss_dssp             -GGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEEC
T ss_pred             -ccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEEc
Confidence             1135799999876543 33568899999999887543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.78  E-value=0.0059  Score=51.92  Aligned_cols=74  Identities=15%  Similarity=0.253  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|+|+ |++|.++++.+...|++|+++.++.++.+.+ ++++....++..+  .    .++   .. .++|++++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~----~~~---~~-~~~DivVn  186 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS--M----DEL---EG-HEFDLIIN  186 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC--S----GGG---TT-CCCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEec--H----HHh---cc-CCCCEEEE
Confidence            5789999999 9999999999999999999999998876544 4554310011111  1    011   11 47999999


Q ss_pred             CCChhh
Q 019196          225 PVGGKL  230 (344)
Q Consensus       225 ~~g~~~  230 (344)
                      |++...
T Consensus       187 ~t~~~~  192 (271)
T 1nyt_A          187 ATSSGI  192 (271)
T ss_dssp             CCSCGG
T ss_pred             CCCCCC
Confidence            998643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.76  E-value=0.0068  Score=53.13  Aligned_cols=78  Identities=18%  Similarity=0.272  Sum_probs=50.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH--HHHHhcCC--c-EEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLGV--D-HVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      +.+|||+|++|.+|..+++.+...|++|++++++.++.  +.++.++.  . ..+..+ ....+.+.+..+..   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMD-LLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCC-TTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECC-CCCHHHHHHHHHhc---CCCE
Confidence            56899999999999999998888899999999876542  23344421  1 122111 11112233333222   5899


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      ||+|++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.76  E-value=0.0038  Score=51.72  Aligned_cols=102  Identities=17%  Similarity=0.248  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ....++++||-+|+  +.|..+..+++..  +.++++++.+++..+.+++    .|...-+.....+.   .+.+.....
T Consensus        68 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~---~~~l~~l~~  142 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA---LATLEQLTQ  142 (232)
T ss_dssp             HHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHHHHHHT
T ss_pred             HHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHHh
Confidence            33456789999997  4899999999876  5699999999987777753    34321112222222   111222221


Q ss_pred             -C--CCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          216 -L--KGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 -~--~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .  ..||+||-....    ..++.+.+.|+++|.++.-.
T Consensus       143 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          143 GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             1  579999854432    34678889999999998753

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.75  E-value=0.016  Score=49.97  Aligned_cols=87  Identities=18%  Similarity=0.177  Sum_probs=63.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|...... +..+.            -...|+||.|++
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~-~~~e~------------~~~aDvvi~~vp   73 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAA-SAREF------------AGVVDALVILVV   73 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEES-SSTTT------------TTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccC-CHHHH------------HhcCCEEEEECC
Confidence            57999998 99999999999889999999999999998888888654221 11111            135799999988


Q ss_pred             hh-hHHHHH-------hcccCCCEEEEEe
Q 019196          228 GK-LTKESL-------KLLNWGAQILVIG  248 (344)
Q Consensus       228 ~~-~~~~~~-------~~l~~~G~~v~~g  248 (344)
                      .+ .....+       ..++++..++.++
T Consensus        74 ~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           74 NAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            63 444443       4566666666554

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.74  E-value=0.00063  Score=57.83  Aligned_cols=76  Identities=30%  Similarity=0.366  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|+++++|..+++.+...|++|++++++.++.+....+    ..|..+.   +....+.+..  ...++|+++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~---~~~~~~~~~~~~~~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREA---AYADGLPGAVAAGLGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSH---HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCH---HHHHHHHHHHHHhcCCCCEEE
Confidence            468999999999999999999988999999999876543211000    1122221   1122222211  124699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus       100 nnAg~  104 (266)
T 3uxy_A          100 NNAGV  104 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99883

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.74  E-value=0.0025  Score=60.86  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=48.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec---------CHHHHHH----HHhcCCcEEEeCCCCCchhhHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---------GAEKIKF----LKSLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~---------~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .++++||+|+++++|.+.+..+...|++|+++++         +.++.+.    +++.+...+.+..+...   .+++.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~---~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVID---GAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGG---HHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHH---HHHHHH
Confidence            4789999999999999999999999999999876         4333332    24456556666655433   333322


Q ss_pred             Hh--cCCCccEEEeCCCh
Q 019196          213 AR--KLKGVDVLYDPVGG  228 (344)
Q Consensus       213 ~~--~~~~~d~vid~~g~  228 (344)
                      ..  ...++|++++++|.
T Consensus        95 ~~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ----------CEECCCCC
T ss_pred             HHHHHCCCCcEEEECCCC
Confidence            21  12469999999983

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.73  E-value=0.012  Score=50.04  Aligned_cols=86  Identities=13%  Similarity=0.069  Sum_probs=61.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+.+.|...... .  +.    .+     . ...|+||.|+..
T Consensus         2 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~-~--~~----~~-----~-~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-Q--DL----SL-----L-QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-S--CG----GG-----G-TTCSEEEECSCH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCcccc-C--CH----HH-----h-CCCCEEEEECCH
Confidence            5889998 99999999998888999999999999888887777531111 1  11    11     1 368999999997


Q ss_pred             hhHH----HHHhcccCCCEEEEEe
Q 019196          229 KLTK----ESLKLLNWGAQILVIG  248 (344)
Q Consensus       229 ~~~~----~~~~~l~~~G~~v~~g  248 (344)
                      ....    .....++++..++.++
T Consensus        68 ~~~~~~~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             HHHHHHHHHHHhhCCCCCEEEECC
Confidence            5443    3345566676676653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.72  E-value=0.0013  Score=55.80  Aligned_cols=71  Identities=18%  Similarity=0.097  Sum_probs=48.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++|||+|++|++|..+++.+...|++|+++++++++..     +.. ..+..+-.+    ...+....  .++|++|++
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d----~~~~~~~~--~~~D~vi~~   71 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----GPNEECVQCDLAD----ANAVNAMV--AGCDGIVHL   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----CTTEEEEECCTTC----HHHHHHHH--TTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----CCCCEEEEcCCCC----HHHHHHHH--cCCCEEEEC
Confidence            468999999999999999998888999999998865432     211 222222222    22333333  269999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      +|.
T Consensus        72 Ag~   74 (267)
T 3rft_A           72 GGI   74 (267)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.72  E-value=0.0097  Score=50.74  Aligned_cols=97  Identities=20%  Similarity=0.231  Sum_probs=65.7

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||....+...+.+..---.|++++|+|.++-+|..++.++...|++|++..+....++                     
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~---------------------  203 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED---------------------  203 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH---------------------
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch---------------------
Confidence            44444455544433322247899999999666999999999999999988876322111                     


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ..+..     ..+|+||.++|.+.+ ---.+++++..++++|..
T Consensus       204 l~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          204 MIDYL-----RTADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHH-----HTCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             hhhhh-----ccCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence            00111     358999999997543 122668999999999865

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.72  E-value=0.0057  Score=53.48  Aligned_cols=82  Identities=17%  Similarity=0.070  Sum_probs=49.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH--HHHHhcC--C-cEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLG--V-DHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g--~-~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      .-+++.+|||+|++|.+|..+++.+...|++|++++++.++.  ..++.+.  . ...+..+-.+. +.+.+..+.   .
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~---~   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA-CSVQRAVIK---A   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH-HHHHHHHHH---H
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCH-HHHHHHHHH---c
Confidence            346788999999999999999998888899999999876431  2233321  1 12222222221 223333322   2


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+||+|++.
T Consensus        86 ~~d~Vih~A~~   96 (335)
T 1rpn_A           86 QPQEVYNLAAQ   96 (335)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECccc
Confidence            58999999873

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.72  E-value=0.0097  Score=48.01  Aligned_cols=92  Identities=18%  Similarity=0.219  Sum_probs=62.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHHhcC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      +.++.+||-+|+ | .|..+..+++. +. +|++++.+++..+.+++    .+..  .+...+-.+.           ..
T Consensus        58 ~~~~~~vLDiG~-G-~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----------~~  123 (205)
T 3grz_A           58 MVKPLTVADVGT-G-SGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-----------VD  123 (205)
T ss_dssp             CSSCCEEEEETC-T-TSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-----------CC
T ss_pred             ccCCCEEEEECC-C-CCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-----------CC
Confidence            568899999997 4 37777777764 55 99999999987777754    3432  2333222221           13


Q ss_pred             CCccEEEeCCChh----hHHHHHhcccCCCEEEEEec
Q 019196          217 KGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       217 ~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ..||+|+.+....    .+..+.+.|+++|+++..+.
T Consensus       124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  160 (205)
T 3grz_A          124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGI  160 (205)
T ss_dssp             SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEE
T ss_pred             CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence            5799999766543    34566688999999988543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.70  E-value=0.0062  Score=49.18  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=49.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++||+|++|++|..+++.+...  +|++++++.++.+.+. +++. ..+..+-.+ .+.+.+..+.  ..++|++|+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~--~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLAD-ELEAKALLEE--AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTS-HHHHHHHHHH--HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCC-HHHHHHHHHh--cCCCCEEEECC
Confidence            36899999999999888877655  9999999987766553 3433 333222222 2223333333  24799999998


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      |.
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            73

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.69  E-value=0.00063  Score=57.08  Aligned_cols=92  Identities=23%  Similarity=0.286  Sum_probs=57.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCc--hhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV--IPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      ++|||+|++|++|..++..+...|++|++++++.++.+.      .    . ..+.  .+.++++.+.. ..++|++|++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~----~-~~D~~~~~~~~~~~~~~-~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------D----L-STPGGRETAVAAVLDRC-GGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C----T-TSHHHHHHHHHHHHHHH-TTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------c----c-cCCcccHHHHHHHHHHc-CCCccEEEEC
Confidence            469999999999999999888899999999987653210      0    0 1111  11122332222 2479999999


Q ss_pred             CChhh-------------------HHHHHhcccC--CCEEEEEeccC
Q 019196          226 VGGKL-------------------TKESLKLLNW--GAQILVIGFAS  251 (344)
Q Consensus       226 ~g~~~-------------------~~~~~~~l~~--~G~~v~~g~~~  251 (344)
                      +|...                   ++.+...++.  .++++.++...
T Consensus        70 Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  116 (255)
T 2dkn_A           70 AGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIA  116 (255)
T ss_dssp             CCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccc
Confidence            87311                   1233334433  38999987654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.69  E-value=0.0069  Score=50.22  Aligned_cols=73  Identities=21%  Similarity=0.188  Sum_probs=47.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d~vid~  225 (344)
                      ++++||+|++|++|..+++.+...|++|++++++.+    .+++   ..+..+-.+. +.+.++.+.. ...++|+++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~~~---~~~~~D~~~~-~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GEDL---IYVEGDVTRE-EDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SSSS---EEEECCTTCH-HHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----ccce---EEEeCCCCCH-HHHHHHHHHHHhhCCceEEEEc
Confidence            468999999999999999988888999999998764    1111   2333322222 1223322211 12369999999


Q ss_pred             CC
Q 019196          226 VG  227 (344)
Q Consensus       226 ~g  227 (344)
                      +|
T Consensus        74 ag   75 (242)
T 1uay_A           74 AG   75 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            87

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.69  E-value=0.0074  Score=50.74  Aligned_cols=94  Identities=9%  Similarity=0.061  Sum_probs=66.1

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||........+.+..  -.|++++|+|.++-+|..++.++...|++|++..+..                   .+    
T Consensus       132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------------~~----  186 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------------KD----  186 (276)
T ss_dssp             CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SC----
T ss_pred             CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------cc----
Confidence            4555555555554443  5789999999966799999999999999998876531                   11    


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +++..     +.+|++|.++|.+.+ ---.+++++..++++|...
T Consensus       187 L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          187 IGSMT-----RSSKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHH-----HHSSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             HHHhh-----ccCCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence            22222     247999999997543 1226689999999988653

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.68  E-value=0.0094  Score=47.71  Aligned_cols=99  Identities=14%  Similarity=0.185  Sum_probs=66.5

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCC--c-EEEeCCCCCchhhHHHHH
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGV--D-HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~--~-~v~~~~~~~~~~~~~~~~  211 (344)
                      ...++++.+||-.|+  |.|..+..+++..+  .++++++.+++..+.+++    .|.  . .++..+-.+.       .
T Consensus        17 ~~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-------~   87 (197)
T 3eey_A           17 KMFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNM-------D   87 (197)
T ss_dssp             HHHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGG-------G
T ss_pred             HhcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH-------h
Confidence            445788999999987  34888888888854  699999999987777753    333  1 2222221111       1


Q ss_pred             HHhcCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      . .....||+|+.+.+-                ..+..+.+.|+++|+++....
T Consensus        88 ~-~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           88 K-YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             G-TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             h-hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            0 123579999865421                356788899999999988753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.67  E-value=0.014  Score=49.77  Aligned_cols=73  Identities=16%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCC----cEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGV----DHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .+++++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+ ++++.    ..+...+..+    +.+..     ..+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~----l~~~l-----~~~  195 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG----IEDVI-----AAA  195 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT----HHHHH-----HHS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH----HHHHH-----hcC
Confidence            5789999999 9999999999999999 799999998877644 33321    1111111112    22221     258


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+|+||++.
T Consensus       196 DiVInaTp~  204 (283)
T 3jyo_A          196 DGVVNATPM  204 (283)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999999974

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.66  E-value=0.0055  Score=53.67  Aligned_cols=87  Identities=17%  Similarity=0.185  Sum_probs=66.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|...++.++..|++|++.+++.++ +.+++.|+..    .  +    .+++.     ...|+|+.|
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~--~----l~ell-----~~aDvV~l~  226 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ----L--P----LEEIW-----PLCDFITVH  226 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE----C--C----HHHHG-----GGCSEEEEC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee----C--C----HHHHH-----hcCCEEEEe
Confidence            4679999999 999999999999999999999987665 4566777642    1  1    23322     358999999


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++..     .+ ...+..|++++.++.++.
T Consensus       227 ~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          227 TPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            8752     23 568899999999988874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.66  E-value=0.0054  Score=52.26  Aligned_cols=96  Identities=17%  Similarity=0.203  Sum_probs=61.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +|||+|++|.+|..+++.+...  |++|+++++++++.+.+...+.. ++..+-.+    ...+.+..  .++|+||+++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d----~~~~~~~~--~~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGIT-VRQADYGD----EAALTSAL--QGVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCE-EEECCTTC----HHHHHHHT--TTCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCe-EEEcCCCC----HHHHHHHH--hCCCEEEEeC
Confidence            4899999999999999888777  89999999987765555444543 33332222    22333333  3689999998


Q ss_pred             Chh------hHHHHHhcccC--CCEEEEEeccC
Q 019196          227 GGK------LTKESLKLLNW--GAQILVIGFAS  251 (344)
Q Consensus       227 g~~------~~~~~~~~l~~--~G~~v~~g~~~  251 (344)
                      +..      .....++.++.  -++++.++...
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            742      22334444433  25888887644

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.65  E-value=0.0042  Score=51.14  Aligned_cols=106  Identities=20%  Similarity=0.254  Sum_probs=67.0

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..+..++++||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+..+....+....
T Consensus        64 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~  141 (229)
T 2avd_A           64 LARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG  141 (229)
T ss_dssp             HHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence            344567789999997  4888999999876  5699999999887777754    3431111111222211111111100


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+|+.....    ..+..+.+.|+++|.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            01579999865443    35678889999999998754

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.63  E-value=0.014  Score=51.28  Aligned_cols=99  Identities=18%  Similarity=0.289  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE-------------EeCCCCCchhhHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-------------VDLSNESVIPSVKEFL  211 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v-------------~~~~~~~~~~~~~~~~  211 (344)
                      -.+++|.|.|. |.+|+.+++.++..|++|++++.+.++.+.++++++..+             +........ ..+++ 
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I-~~~~~-  249 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVI-TTEVA-  249 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCB-CHHHH-
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhc-CHHHH-
Confidence            36899999998 999999999999999999999888776556666765332             110000000 00111 


Q ss_pred             HHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ..   -+.++|+|+++.+.. +++...+..+|.++..+.
T Consensus       250 ~~---lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~  285 (355)
T 1c1d_A          250 RT---LDCSVVAGAANNVIADEAASDILHARGILYAPDF  285 (355)
T ss_dssp             HH---CCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHH
T ss_pred             hh---CCCCEEEECCCCCCCCHHHHHHHHhCCEEEECCe
Confidence            11   146777777776654 356677777777766543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.62  E-value=0.006  Score=49.08  Aligned_cols=96  Identities=15%  Similarity=0.194  Sum_probs=60.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|||+|++|.+|..+++.+...|.+|+++++++++.......+. ..+..+-.+    .+.+.+..  .++|++|++++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~----~~~~~~~~--~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ----AADVDKTV--AGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTS----HHHHHHHH--TTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCC----HHHHHHHH--cCCCEEEECcc
Confidence            689999999999999999998889999999998765432111122 233333222    22233333  35899999988


Q ss_pred             hhh-----------HHHHHhcccC--CCEEEEEecc
Q 019196          228 GKL-----------TKESLKLLNW--GAQILVIGFA  250 (344)
Q Consensus       228 ~~~-----------~~~~~~~l~~--~G~~v~~g~~  250 (344)
                      ...           ....++.++.  .++++.++..
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            421           2233333333  3588887754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.62  E-value=0.043  Score=41.90  Aligned_cols=94  Identities=12%  Similarity=0.130  Sum_probs=60.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-HHHHHHHHh---cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFLKS---LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      ..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+++   .|. .++..+..+    .. .+....-.++|++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~~----~~-~l~~a~i~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSND----SS-VLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTTS----HH-HHHHHTTTTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCCC----HH-HHHHcChhhCCEE
Confidence            457999998 999999999999999999999997 455544432   243 333333222    12 2222234579999


Q ss_pred             EeCCChhhHH----HHHhcccCCCEEEEE
Q 019196          223 YDPVGGKLTK----ESLKLLNWGAQILVI  247 (344)
Q Consensus       223 id~~g~~~~~----~~~~~l~~~G~~v~~  247 (344)
                      +-+++.+..+    ...+.+.+..+++..
T Consensus        76 i~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           76 LALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9999874332    233444455566553

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.61  E-value=0.00057  Score=56.98  Aligned_cols=99  Identities=16%  Similarity=0.159  Sum_probs=60.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ++++||+|++|++|..+++.+...|+  +|+++++++++.+....-+. ..+..+-.+.    +.+....  .++|++|+
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~d~----~~~~~~~--~~~d~vi~   90 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEKL----DDYASAF--QGHDVGFC   90 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGGG----GGGGGGG--SSCSEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCcCCH----HHHHHHh--cCCCEEEE
Confidence            57899999999999999999888899  99999988654332211122 2222221111    1111111  36999999


Q ss_pred             CCChhh---------------HHHHHhcccC--CCEEEEEeccCC
Q 019196          225 PVGGKL---------------TKESLKLLNW--GAQILVIGFASG  252 (344)
Q Consensus       225 ~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  252 (344)
                      |+|...               ....++.+++  .++++.++....
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            998421               1223333333  368998886543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.59  E-value=0.011  Score=50.96  Aligned_cols=74  Identities=27%  Similarity=0.397  Sum_probs=50.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-------HHHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-------EKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-------~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      .+|||+||+|.+|..+++.+...|.+|++++++.       ++.+.++   ..+.. ++..+-.+    .+.+....  .
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d----~~~l~~~~--~   75 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDIND----HETLVKAI--K   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTTC----HHHHHHHH--T
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCCC----HHHHHHHH--h
Confidence            5799999999999999988888899999999886       5544333   33543 33332222    22233333  3


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+||++++.
T Consensus        76 ~~d~vi~~a~~   86 (307)
T 2gas_A           76 QVDIVICAAGR   86 (307)
T ss_dssp             TCSEEEECSSS
T ss_pred             CCCEEEECCcc
Confidence            69999999985

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.59  E-value=0.0055  Score=54.52  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=50.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      ..+|||+||+|.+|..+++.+... |++|++++++.++...+.....-.++..+-.+..+.+.+..+     ++|+||.|
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            468999999999999999888777 899999999876554433322222333322202112332222     69999998


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      ++.
T Consensus        99 A~~  101 (372)
T 3slg_A           99 VAI  101 (372)
T ss_dssp             BCC
T ss_pred             Ccc
Confidence            873

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.58  E-value=0.0093  Score=52.50  Aligned_cols=94  Identities=21%  Similarity=0.200  Sum_probs=59.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH----HHHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~----~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+|||+|++|.+|..+++.+...|.+|++++++.    ++.+.++   ..+.. ++..+-.+    .+.+.+.....++|
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~-~~~~Dl~d----~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAI-IVYGLINE----QEAMEKILKEHEID   85 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCE-EEECCTTC----HHHHHHHHHHTTCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcE-EEEeecCC----HHHHHHHHhhCCCC
Confidence            5799999999999999999888899999999876    4444333   34443 33333222    22222222223799


Q ss_pred             EEEeCCChh---hHHHHHhcccCCC---EEEE
Q 019196          221 VLYDPVGGK---LTKESLKLLNWGA---QILV  246 (344)
Q Consensus       221 ~vid~~g~~---~~~~~~~~l~~~G---~~v~  246 (344)
                      +||.+++..   ....+++.++..|   +++.
T Consensus        86 ~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           86 IVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             EEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             EEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            999999863   2234445544444   5553

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.58  E-value=0.01  Score=50.60  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++++|+|++..+|.-+++++...|++|++..+..                   .+    +.+..     +.+|+||.+
T Consensus       164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------~~----L~~~~-----~~ADIVI~A  215 (301)
T 1a4i_A          164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------------AH----LDEEV-----NKGDILVVA  215 (301)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------SS----HHHHH-----TTCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------------cc----HHHHh-----ccCCEEEEC
Confidence            688999999955789999999999999998876431                   11    22221     468999999


Q ss_pred             CChhhHHHHHhcccCCCEEEEEeccC
Q 019196          226 VGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       226 ~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|.+.+ ---++++++..++++|...
T Consensus       216 vg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          216 TGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             CCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             CCCccc-CCHHHcCCCcEEEEccCCC
Confidence            998654 2235688999999998653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.57  E-value=0.009  Score=50.92  Aligned_cols=96  Identities=27%  Similarity=0.255  Sum_probs=62.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +|||+|++|.+|..+++.+...  |++|++++++.++.+.+...+.. ++..+-.+    ...+.+..  .++|+||+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~d----~~~l~~~~--~~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVE-VRHGDYNQ----PESLQKAF--AGVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCE-EEECCTTC----HHHHHHHT--TTCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCe-EEEeccCC----HHHHHHHH--hcCCEEEEcC
Confidence            5899999999999999888777  89999999987766555444443 33332222    22333333  3689999998


Q ss_pred             Chh--------hHHHHHhcccCC--CEEEEEeccC
Q 019196          227 GGK--------LTKESLKLLNWG--AQILVIGFAS  251 (344)
Q Consensus       227 g~~--------~~~~~~~~l~~~--G~~v~~g~~~  251 (344)
                      +..        .....++.++..  ++++.++...
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            741        112334444433  4888887543

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.57  E-value=0.027  Score=47.00  Aligned_cols=99  Identities=18%  Similarity=0.109  Sum_probs=68.4

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~  211 (344)
                      .....+.++.+||-+|+  |.|..+..+++..+++|++++.+++..+.+++    .|..   .+...+-.+.        
T Consensus        29 ~~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--------   98 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY--------   98 (256)
T ss_dssp             HHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC--------
T ss_pred             HHhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC--------
Confidence            35667889999999997  44888889998889999999999887776643    3422   2222222211        


Q ss_pred             HHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                        .....||+|+-...-       ..+..+.+.|+|+|+++....
T Consensus        99 --~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  141 (256)
T 1nkv_A           99 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  141 (256)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             --CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence              013569999853221       346788899999999988653

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.56  E-value=0.024  Score=48.33  Aligned_cols=102  Identities=14%  Similarity=0.164  Sum_probs=68.6

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      +.....+.++.+||-+|+  |.|..+..+++..|++|++++.+++..+.+++.    |...-+.....+..    +    
T Consensus        56 ~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~----~----  125 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE----Q----  125 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG----G----
T ss_pred             HHHHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh----h----
Confidence            335667789999999997  458888899977799999999999887777542    32111111111221    0    


Q ss_pred             hcCCCccEEEeC-----CCh----hhHHHHHhcccCCCEEEEEecc
Q 019196          214 RKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       214 ~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .. ..||+|+..     .+.    ..+..+.+.|+|+|+++.....
T Consensus       126 ~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  170 (287)
T 1kpg_A          126 FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT  170 (287)
T ss_dssp             CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            11 579999864     221    3467788999999999886543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.55  E-value=0.013  Score=49.90  Aligned_cols=86  Identities=22%  Similarity=0.204  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++++||+|+ |++|.+++..+...|+ +|+++.++.++.+.+. ++.   ...         ..++..   - .+|+||
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~---------~~~l~~---l-~~DivI  183 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS---------YDELSN---L-KGDVII  183 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE---------HHHHTT---C-CCSEEE
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc---------HHHHHh---c-cCCEEE
Confidence            5789999999 9999999999999999 8999999988765442 231   121         222221   2 699999


Q ss_pred             eCCChhhH------HHHHhcccCCCEEEEEe
Q 019196          224 DPVGGKLT------KESLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~~~------~~~~~~l~~~G~~v~~g  248 (344)
                      ||++..+.      ......++++..++++.
T Consensus       184 naTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv  214 (282)
T 3fbt_A          184 NCTPKGMYPKEGESPVDKEVVAKFSSAVDLI  214 (282)
T ss_dssp             ECSSTTSTTSTTCCSSCHHHHTTCSEEEESC
T ss_pred             ECCccCccCCCccCCCCHHHcCCCCEEEEEe
Confidence            99964221      11234566776666654

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.54  E-value=0.015  Score=49.36  Aligned_cols=101  Identities=20%  Similarity=0.237  Sum_probs=69.6

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhc-----C--CcEEEeCCCCCchhhHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL-----G--VDHVVDLSNESVIPSVKE  209 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~-----g--~~~v~~~~~~~~~~~~~~  209 (344)
                      .....++++++||-.|+ | .|..+..+++..  +.+|++++.+++..+.+++.     |  ...+ .....+..+.   
T Consensus        92 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~d~~~~---  165 (280)
T 1i9g_A           92 VHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVSDLADS---  165 (280)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECSCGGGC---
T ss_pred             HHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEECchHhc---
Confidence            35667889999999997 4 788899999875  56999999999887777542     4  2211 1111111100   


Q ss_pred             HHHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          210 FLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                         ......||+|+.....  ..+..+.+.|+++|+++...
T Consensus       166 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 ---ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             ---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence               0123469999876554  56788999999999998865

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.54  E-value=0.011  Score=48.50  Aligned_cols=104  Identities=14%  Similarity=0.242  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ....++.+||-+|+  +.|..+..+++..  +++|++++.+++..+.+++    .|...-+.....+..+....... ..
T Consensus        54 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~  130 (223)
T 3duw_A           54 VQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIEN-EK  130 (223)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-TT
T ss_pred             HHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh-cC
Confidence            34557789999986  5788888899876  6799999999987776643    35321111112222111211111 11


Q ss_pred             CCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          216 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...||+||-....    ..+..+.+.|+|+|.++.-.
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1469999855443    34677889999999887643

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.53  E-value=0.0033  Score=52.26  Aligned_cols=97  Identities=14%  Similarity=0.120  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC----CcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG----VDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ..+|.+||-+|.  |.|..+..+++..+.++++++.+++-.+.+++..    ....+.  ..+    ...+........|
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~--~~~----a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGL----WEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESC----HHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEE--eeh----HHhhcccccccCC
Confidence            468899999997  5688888888877779999999999888886543    211111  111    2333323344579


Q ss_pred             cEE-EeCCCh-----------hhHHHHHhcccCCCEEEEEe
Q 019196          220 DVL-YDPVGG-----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       220 d~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      |.| +|+...           ..+.++.+.|+|||+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            988 465432           13467889999999998864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.52  E-value=0.034  Score=45.34  Aligned_cols=76  Identities=9%  Similarity=0.085  Sum_probs=55.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+. ..+.. ++..+..+.     +.++...-..+|+++-+++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~-----~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHK-----EILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSH-----HHHHHHTCCTTCEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCH-----HHHHhcCcccCCEEEEecC
Confidence            4899998 99999999999999999999999999887764 45653 343333321     2233334457999999998


Q ss_pred             hhhH
Q 019196          228 GKLT  231 (344)
Q Consensus       228 ~~~~  231 (344)
                      .+..
T Consensus        75 ~d~~   78 (218)
T 3l4b_C           75 RDEV   78 (218)
T ss_dssp             CHHH
T ss_pred             CcHH
Confidence            7543

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.51  E-value=0.027  Score=46.14  Aligned_cols=100  Identities=17%  Similarity=0.197  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC------CeEEEEecCHHHHHHHHh----cC-----Cc--EEEeCCCCCchh
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG------ATIIAVARGAEKIKFLKS----LG-----VD--HVVDLSNESVIP  205 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g------~~v~~~~~~~~~~~~~~~----~g-----~~--~v~~~~~~~~~~  205 (344)
                      .++++.+||-+|+ | .|..+..+++..+      .+|++++.+++..+.+++    .+     ..  .+...+....  
T Consensus        77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~--  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV--  152 (227)
T ss_dssp             TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC--
T ss_pred             hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc--
Confidence            5788999999997 4 3888899998876      599999999987777754    23     11  2222221111  


Q ss_pred             hHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEec
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  249 (344)
                       .....  .....||+|+.+... .....+.+.|+++|+++..-.
T Consensus       153 -~~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          153 -NEEEK--KELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             -CHHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             -ccccC--ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence             10000  112469999987665 455788899999999887643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.48  E-value=0.0073  Score=52.97  Aligned_cols=74  Identities=18%  Similarity=0.112  Sum_probs=47.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|||+|++|.+|..+++.+... |++|++++++.++.+.+.....-..+..+-.+..+.+.+..     .++|+||.|++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-----KKCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH-----HHCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhc-----cCCCEEEEccc
Confidence            6999999999999999988887 89999999987654332211111233322222111133222     26899999876

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=96.48  E-value=0.0046  Score=54.19  Aligned_cols=35  Identities=14%  Similarity=0.109  Sum_probs=30.4

Q ss_pred             CCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ++++||+|+++  ++|.++++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            57899999964  999999999999999999887654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.47  E-value=0.015  Score=50.18  Aligned_cols=74  Identities=24%  Similarity=0.418  Sum_probs=50.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-----HHHHHHHHh---cCCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-----AEKIKFLKS---LGVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~-----~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .+|||+|++|.+|..+++.+...|.+|++++++     +++.+.++.   .+. .++..+-.+    ...+....  .++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d----~~~l~~~~--~~~   77 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDD----HQRLVDAL--KQV   77 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSC----HHHHHHHH--TTC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCC----HHHHHHHH--hCC
Confidence            579999999999999999988889999999998     444444332   343 233322222    22333333  369


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |+||++++.
T Consensus        78 d~vi~~a~~   86 (313)
T 1qyd_A           78 DVVISALAG   86 (313)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.46  E-value=0.018  Score=50.89  Aligned_cols=98  Identities=11%  Similarity=0.174  Sum_probs=60.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH--HHHHhcCCcEEEeCC-CCCchhhHHHHHHHhcCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLGVDHVVDLS-NESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~--~~~~~~g~~~v~~~~-~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +.+|||+|++|.+|..+++.+...|++|++++++.++.  +.+.......++..+ -.+    ...+....  .++|.||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d----~~~l~~~~--~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN----VPLMDTLF--EGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC----HHHHHHHH--TTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCC----HHHHHHHH--hcCCEEE
Confidence            46799999999999999988888899999999887654  333332222333333 222    22233333  3689999


Q ss_pred             eCCChh------hHHHHHhcccCC---CEEEEEecc
Q 019196          224 DPVGGK------LTKESLKLLNWG---AQILVIGFA  250 (344)
Q Consensus       224 d~~g~~------~~~~~~~~l~~~---G~~v~~g~~  250 (344)
                      .+++..      ....+++.++..   ++++.++..
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            776531      113344444332   589888764

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.46  E-value=0.0047  Score=54.84  Aligned_cols=89  Identities=17%  Similarity=0.215  Sum_probs=67.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|.|+|. |.+|..+++.++..|++ |++.+++.++.+.++++|+..   ..  +    ..++.     ...|+|+.
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~---~~--~----l~ell-----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARR---VE--N----IEELV-----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEE---CS--S----HHHHH-----HTCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEe---cC--C----HHHHH-----hcCCEEEE
Confidence            5789999999 99999999999999997 999998776666667777432   11  1    33333     25799999


Q ss_pred             CCChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          225 PVGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      +++..     .+ ...+..|++++.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            98752     23 567789999988888763

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.45  E-value=0.01  Score=50.28  Aligned_cols=96  Identities=19%  Similarity=0.150  Sum_probs=64.9

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS  206 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  206 (344)
                      +||........+.+...--.+++++|+|++..+|.-+++++...|++|++..+..+                   +    
T Consensus       139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~-------------------~----  195 (288)
T 1b0a_A          139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------N----  195 (288)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------C----
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch-------------------h----
Confidence            44444444444422222236889999999557899999999999999998864321                   1    


Q ss_pred             HHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +.+..     +.+|+||.++|.+.+ --.++++++..++++|...
T Consensus       196 L~~~~-----~~ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          196 LRHHV-----ENADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHH-----HHCSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             HHHHh-----ccCCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence            22222     248999999998654 2235679999999998653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.45  E-value=0.0073  Score=52.26  Aligned_cols=70  Identities=17%  Similarity=0.129  Sum_probs=47.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|||+|++|.+|..+++.+...|.+|+++++++.+.. ++  +. .++..+-.  .+.+.   +..  .++|+||+|++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~-~~~~~Dl~--~~~~~---~~~--~~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DY-EYRVSDYT--LEDLI---NQL--NDVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CC-EEEECCCC--HHHHH---HHT--TTCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ce-EEEEcccc--HHHHH---Hhh--cCCCEEEEccc
Confidence            58999999999999999999999999999999854443 33  32 22322222  22232   222  37999999987


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      .
T Consensus        72 ~   72 (311)
T 3m2p_A           72 T   72 (311)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.45  E-value=0.026  Score=48.82  Aligned_cols=101  Identities=17%  Similarity=0.155  Sum_probs=69.7

Q ss_pred             HhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHH
Q 019196          140 HRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       140 ~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~  211 (344)
                      .... ++++.+||-+|+  |.|..+..+++..+++|++++.+++..+.+++    .|..   .+...+-.+.   .    
T Consensus       110 ~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~----  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT---P----  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C----
T ss_pred             HHhccCCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC---C----
Confidence            4444 788999999997  56888888888778999999999987777754    3422   2222222211   0    


Q ss_pred             HHhcCCCccEEEeCCC------hhhHHHHHhcccCCCEEEEEeccC
Q 019196          212 KARKLKGVDVLYDPVG------GKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        .....||+|+.+-.      ...+..+.+.|+|+|+++......
T Consensus       181 --~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~  224 (312)
T 3vc1_A          181 --FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW  224 (312)
T ss_dssp             --CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred             --CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence              12357999986432      245678889999999999876443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.45  E-value=0.016  Score=51.45  Aligned_cols=36  Identities=22%  Similarity=0.262  Sum_probs=29.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      ++|||+|++|.+|..+++.+...|++|++++++.++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            579999999999999999888889999999987653

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.45  E-value=0.016  Score=45.80  Aligned_cols=99  Identities=21%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ....+.++.+||-.|+ |. |..+..+++.. .++++++.+++..+.+++    .+. ..+ .....+.    .+.  ..
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~d~----~~~--~~   96 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGDA----PEA--LC   96 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESCH----HHH--HT
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcce-EEEecCH----HHh--cc
Confidence            5567889999999997 44 88888888765 899999999987777754    343 111 1111122    111  11


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+|+.....    ..+..+.+.|+++|.++...
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            11479999976542    45677889999999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.44  E-value=0.0067  Score=53.62  Aligned_cols=77  Identities=14%  Similarity=0.077  Sum_probs=50.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc--C-CcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL--G-VDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      +.+|||+|++|.+|..+++.+...|++|++++++.++...+ +.+  + .-..+..+-.+. +.+.+..+..   ++|+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~---~~d~v   84 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-NKLLESIREF---QPEIV   84 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-HHHHHHHHHH---CCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCH-HHHHHHHHhc---CCCEE
Confidence            56899999999999999999888899999999876543222 211  1 112333322221 2233333221   58999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      |+|++
T Consensus        85 ih~A~   89 (357)
T 1rkx_A           85 FHMAA   89 (357)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99988

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.44  E-value=0.0057  Score=53.48  Aligned_cols=79  Identities=15%  Similarity=0.131  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+.+|||+|++|.+|..+++.+...|++|++++++.++.. .++.+.....+..+-.+. +.+.+..+..   ++|+||+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~-~~~~~~~~~~---~~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDA-GLLERAFDSF---KPTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCH-HHHHHHHHHH---CCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCH-HHHHHHHhhc---CCCEEEE
Confidence            3568999999999999999998888999999998643221 112222112233222221 2233333222   6999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      |++.
T Consensus        95 ~A~~   98 (330)
T 2pzm_A           95 SAAA   98 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9873

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.44  E-value=0.012  Score=50.90  Aligned_cols=75  Identities=27%  Similarity=0.349  Sum_probs=49.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC---HHHHHHH-Hhc----CCc-EEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG---AEKIKFL-KSL----GVD-HVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~---~~~~~~~-~~~----g~~-~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .++++||+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+ +++    +.. ...+..+.+.   ..+..    
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~---~~~~l----  218 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA---FTEAL----  218 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH---HHHHH----
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh---hHhhc----
Confidence            5789999999 9999999999999999 89999999   6655443 333    221 2233322100   11111    


Q ss_pred             CCCccEEEeCCChh
Q 019196          216 LKGVDVLYDPVGGK  229 (344)
Q Consensus       216 ~~~~d~vid~~g~~  229 (344)
                       ..+|+||||++..
T Consensus       219 -~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 -ASADILTNGTKVG  231 (312)
T ss_dssp             -HHCSEEEECSSTT
T ss_pred             -cCceEEEECCcCC
Confidence             2589999999853

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.43  E-value=0.018  Score=50.58  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=49.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH----------HHHHHHHh-cCC-cEEEeCCCCCchhhHHHHHHHh
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----------EKIKFLKS-LGV-DHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~----------~~~~~~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      +++|||+|++|.+|..+++.+...|++|++++++.          +..+.+++ .+. -..+..+-.+. +.+.+..+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~-   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ-GALQRLFKK-   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH-HHHHHHHHH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH-HHHHHHHHh-
Confidence            36899999999999999998888899999997642          22333332 221 12333322221 223333322 


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                        .++|+||+|++.
T Consensus        80 --~~~d~vih~A~~   91 (348)
T 1ek6_A           80 --YSFMAVIHFAGL   91 (348)
T ss_dssp             --CCEEEEEECCSC
T ss_pred             --cCCCEEEECCCC
Confidence              279999999873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.43  E-value=0.008  Score=53.49  Aligned_cols=92  Identities=21%  Similarity=0.250  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      -+|+|+|+ |.+|..+++.+.. ..+|++.+++.++.+.+++......+|..+      .+.+....  .++|+|++|++
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~--~~~DvVi~~~p   86 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVM--KEFELVIGALP   86 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHH--TTCSEEEECCC
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHH--hCCCEEEEecC
Confidence            37999999 9999999888754 568999999988888776553222223322      22333333  36899999998


Q ss_pred             hhh-HHHHHhcccCCCEEEEEec
Q 019196          228 GKL-TKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       228 ~~~-~~~~~~~l~~~G~~v~~g~  249 (344)
                      ... ...+-.+++.+-.++++..
T Consensus        87 ~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           87 GFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GGGHHHHHHHHHHHTCEEEECCC
T ss_pred             CcccchHHHHHHhcCcceEeeec
Confidence            743 3445567777778888653

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.43  E-value=0.0059  Score=53.81  Aligned_cols=89  Identities=25%  Similarity=0.257  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++....+.+++.|+..+     .+    .+++.     ...|+|+.+
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----l~ell-----~~aDvV~l~  227 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----ED----LNEML-----PKCDVIVIN  227 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SC----HHHHG-----GGCSEEEEC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CC----HHHHH-----hcCCEEEEC
Confidence            4789999999 999999999999999999999987655666677775321     11    23332     357999998


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++..     .+ ...+..|+++..++.++.
T Consensus       228 ~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          228 MPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             SCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            8741     22 567888999988888763

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.43  E-value=0.062  Score=47.19  Aligned_cols=88  Identities=15%  Similarity=0.257  Sum_probs=58.6

Q ss_pred             CEEEEecCCChHHHHHHHHHH-H-cCCeEE-EEecCHHHHHH-HHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGK-V-CGATII-AVARGAEKIKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~-~-~g~~v~-~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      -+|.|+|+ |.+|...++.++ . .+++++ +.++++++.+. ++++|...+++    +    .+++.   ....+|+|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~----~~~~l---~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----N----YKDMI---DTENIDAIF   76 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----C----HHHHH---TTSCCSEEE
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----C----HHHHh---cCCCCCEEE
Confidence            47999999 999998888776 4 367765 55677776654 45677654432    1    23332   234799999


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEe
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g  248 (344)
                      .|++.. ..+.+..+++.+ +-+.+.
T Consensus        77 i~tp~~~h~~~~~~al~~G-~~v~~e  101 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG-LNVFCE  101 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             EeCChHhHHHHHHHHHHCC-CEEEEc
Confidence            999874 556667777764 555554

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.41  E-value=0.0089  Score=51.92  Aligned_cols=87  Identities=18%  Similarity=0.233  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|...++.++..|++|++.+++.++. .+++.|+..   .   +    ..++..     ..|+|+.+
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~---~---~----l~ell~-----~aDvVvl~  203 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA---V---S----LEELLK-----NSDVISLH  203 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE---C---C----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee---c---C----HHHHHh-----hCCEEEEe
Confidence            5789999999 9999999999999999999999887654 466777642   1   2    333332     47999999


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++..     .+ ...+..+++++.++.++.
T Consensus       204 ~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          204 VTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             ccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            8742     23 567788999988888764

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.40  E-value=0.023  Score=47.48  Aligned_cols=105  Identities=18%  Similarity=0.281  Sum_probs=66.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh-
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      ....++++||-+|+  +.|..+..+++.+  +.+|++++.+++..+.+++    .|...-+.....+..+......... 
T Consensus        75 ~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  152 (247)
T 1sui_A           75 LKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEK  152 (247)
T ss_dssp             HHHTTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGG
T ss_pred             HHhhCcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccC
Confidence            34456789999985  6788899999886  6799999999887777653    4442111111122211111111000 


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+||-....    ..+..+.+.|+++|.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence            13579999854432    35678889999999998643

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.39  E-value=0.0097  Score=52.71  Aligned_cols=37  Identities=22%  Similarity=0.211  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH--cCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKV--CGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~--~g~~v~~~~~~~~  182 (344)
                      .+.+|||+||+|.+|..++..+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            457899999999999999988888  8999999998654

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.39  E-value=0.016  Score=47.65  Aligned_cols=95  Identities=16%  Similarity=0.163  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-------CeEEEEecCHHHHHHHHhc----C-------CcEEEeCCCCCch
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG-------ATIIAVARGAEKIKFLKSL----G-------VDHVVDLSNESVI  204 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-------~~v~~~~~~~~~~~~~~~~----g-------~~~v~~~~~~~~~  204 (344)
                      .++++.+||-+|+ | .|..+..+++..+       .+|++++.+++..+.+++.    +       --.+...+.... 
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-  157 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-  157 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC-
Confidence            5788999999997 4 4888888888766       4999999998877766532    1       112222211110 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEe
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  248 (344)
                        .      .....||+|+.+... .....+.+.|+++|+++..-
T Consensus       158 --~------~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          158 --Y------PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             --C------GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --C------CcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence              0      112479999987765 44578889999999988754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.37  E-value=0.022  Score=49.03  Aligned_cols=75  Identities=27%  Similarity=0.413  Sum_probs=49.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------HHHHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG------AEKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~------~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ..+|||+|++|.+|..++..+...|.+|++++++      +++.+.++   ..|.. ++..+-.+    .+.+....  .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d----~~~l~~~~--~   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDD----HASLVEAV--K   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTC----HHHHHHHH--H
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCC----HHHHHHHH--c
Confidence            3579999999999999999988889999999987      33433333   23432 33222222    12222222  2


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+||++++.
T Consensus        77 ~~d~vi~~a~~   87 (308)
T 1qyc_A           77 NVDVVISTVGS   87 (308)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEECCcc
Confidence            59999999985

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.37  E-value=0.0073  Score=49.52  Aligned_cols=102  Identities=23%  Similarity=0.275  Sum_probs=65.9

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHH-HH
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFL-KA  213 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~-~~  213 (344)
                      .....++.+||-+|+  +.|..+..+++..  +.+|++++.+++..+.+++    .|...-+.....+.    .+.. ..
T Consensus        59 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~----~~~~~~~  132 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA----KDTLAEL  132 (225)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH----HHHHHHH
T ss_pred             HHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH----HHHHHHh
Confidence            334457789999986  5688888998876  5799999999987777653    34321111111222    1222 11


Q ss_pred             hcC---CCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKL---KGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~---~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...   ..||+|+-....    ..+..+.+.|+++|.++.-.
T Consensus       133 ~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          133 IHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             HTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            111   579999955443    34677889999999998743

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.37  E-value=0.024  Score=48.45  Aligned_cols=84  Identities=15%  Similarity=0.253  Sum_probs=59.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|.|+|++|.+|...+..+...|.+|++.++++++.+.+.+.|...   .+..+.            -...|+||.|+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~---~~~~~~------------~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL---TDGDGW------------IDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC---CCSSGG------------GGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc---CCHHHH------------hcCCCEEEEcCC
Confidence            37999999999999999999888999999999988888777766432   111111            135899999998


Q ss_pred             hhhHHHHH----hcccCCCEEEE
Q 019196          228 GKLTKESL----KLLNWGAQILV  246 (344)
Q Consensus       228 ~~~~~~~~----~~l~~~G~~v~  246 (344)
                      .......+    ..++++..++.
T Consensus        77 ~~~~~~v~~~l~~~l~~~~ivv~   99 (286)
T 3c24_A           77 DNIIEKVAEDIVPRVRPGTIVLI   99 (286)
T ss_dssp             HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred             chHHHHHHHHHHHhCCCCCEEEE
Confidence            75444433    34555555655

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.36  E-value=0.021  Score=56.13  Aligned_cols=85  Identities=14%  Similarity=0.228  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHH-HcCC-eEEEEecCHH---H----HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGK-VCGA-TIIAVARGAE---K----IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~-~~g~-~v~~~~~~~~---~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      +++++++||+|++|++|..+++.+. ..|+ +|+.++++..   +    .+.+++.|....+..-+....+.++++.+..
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3678999999999999999998886 7899 5888888732   2    2233455755433322323333355555443


Q ss_pred             c-CCCccEEEeCCCh
Q 019196          215 K-LKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~-~~~~d~vid~~g~  228 (344)
                      . ..++|.+|+++|.
T Consensus       607 ~~~~~id~lVnnAGv  621 (795)
T 3slk_A          607 PDEHPLTAVVHAAGV  621 (795)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCEEEEECCCc
Confidence            2 2379999999884

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.36  E-value=0.02  Score=50.75  Aligned_cols=84  Identities=20%  Similarity=0.180  Sum_probs=52.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHH-HHHHcCCeEEEEecCHHH----------------HHHHHhcCCcE-EEeCCCCCchh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQ-IGKVCGATIIAVARGAEK----------------IKFLKSLGVDH-VVDLSNESVIP  205 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~-~~~~~g~~v~~~~~~~~~----------------~~~~~~~g~~~-v~~~~~~~~~~  205 (344)
                      ...++++||+|+++++|++++. +|...|+.++++....+.                .+.+++.|... .++.+-.+. +
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~-e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD-E  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH-H
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH-H
Confidence            3467899999999999998664 454679998887754321                13445566443 444443332 2


Q ss_pred             hHHHHHHH--hcCCCccEEEeCCCh
Q 019196          206 SVKEFLKA--RKLKGVDVLYDPVGG  228 (344)
Q Consensus       206 ~~~~~~~~--~~~~~~d~vid~~g~  228 (344)
                      ..+++.+.  ...+++|+++.+++.
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeccc
Confidence            22222222  135689999999885

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.33  E-value=0.0045  Score=52.68  Aligned_cols=89  Identities=16%  Similarity=0.178  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.+ .. ...     .    ..+....  -..+|+||+
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-----~----~~~~~~~--~~~aDiVIn  181 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-----N----LSHAESH--LDEFDIIIN  181 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-----C----HHHHHHT--GGGCSEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-----c----HhhHHHH--hcCCCEEEE
Confidence            4678999999 9999999999999999 89999999876543321 11 111     1    2222221  136899999


Q ss_pred             CCChhhHHH-----HHhcccCCCEEEEEe
Q 019196          225 PVGGKLTKE-----SLKLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~~~~~-----~~~~l~~~G~~v~~g  248 (344)
                      |++..+...     -...++++..++++.
T Consensus       182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          182 TTPAGMNGNTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             CCC-------CCSSCCTTCCSSCEEEESC
T ss_pred             CccCCCCCCCcCCCCHHHcCCCCEEEEec
Confidence            997533211     134567776666654

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.33  E-value=0.018  Score=47.75  Aligned_cols=104  Identities=14%  Similarity=0.197  Sum_probs=65.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHh-
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKAR-  214 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~-  214 (344)
                      ....+.++||-+|+  +.|..+..+++.+  +.++++++.+++..+.+++    .|...-+.....+..+......... 
T Consensus        66 ~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  143 (237)
T 3c3y_A           66 LKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQE  143 (237)
T ss_dssp             HHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTT
T ss_pred             HHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccC
Confidence            34456789999986  5688888888886  5799999999987777753    3543111111222211111111100 


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEE
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (344)
                      ....||+||-....    ..++.+.+.|+++|.++.-
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            13579999865543    3457788999999998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.30  E-value=0.0051  Score=53.86  Aligned_cols=78  Identities=14%  Similarity=0.126  Sum_probs=48.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +.+|||+|++|.+|..++..+...|++|++++++.... +.++.+.....+..+-.+. +.+.++.+   +..+|+||+|
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~-~~~~~~~~---~~~~D~vih~   96 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADH-ALVNQLIG---DLQPDAVVHT   96 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH-HHHHHHHH---HHCCSEEEEC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCH-HHHHHHHh---ccCCcEEEEC
Confidence            56899999999999999998888899999999875321 1111111112233322221 12333322   2359999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      ++.
T Consensus        97 A~~   99 (333)
T 2q1w_A           97 AAS   99 (333)
T ss_dssp             CCC
T ss_pred             cee
Confidence            874

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.30  E-value=0.036  Score=45.33  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCC------c-EEEeCCCCCchhhHHH
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGV------D-HVVDLSNESVIPSVKE  209 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~------~-~v~~~~~~~~~~~~~~  209 (344)
                      .++++.+||-+|+ | .|..+..+++..|  .+|++++.+++..+.+++    .+.      . .+...+....   .  
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~--  146 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG---Y--  146 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC---C--
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC---c--
Confidence            3788999999997 3 4888888888775  599999999987777643    221      1 1222211110   0  


Q ss_pred             HHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEec
Q 019196          210 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  249 (344)
                          .....||+|+..... .....+.+.|+++|+++..-.
T Consensus       147 ----~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          147 ----AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             ----GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ----ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence                113469999877654 455788999999999988643

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.29  E-value=0.0082  Score=53.68  Aligned_cols=88  Identities=18%  Similarity=0.163  Sum_probs=65.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++++.|+|. |.+|..+++.++..|++|++.+++.++.+.++++|+...   .  +    .+++.     ...|+|+.+
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~---~--~----l~ell-----~~aDvV~l~  254 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH---A--T----REDMY-----PVCDVVTLN  254 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC---S--S----HHHHG-----GGCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec---C--C----HHHHH-----hcCCEEEEe
Confidence            5789999999 999999999999999999999988665566667775321   1  1    22322     357999998


Q ss_pred             CCh-----hhH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-----KLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-----~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++.     ..+ ...+..|+++..++.++
T Consensus       255 ~Plt~~t~~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          255 CPLHPETEHMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cCCchHHHHHhhHHHHhhCCCCCEEEECC
Confidence            873     223 56778889988888776

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.29  E-value=0.024  Score=50.16  Aligned_cols=90  Identities=17%  Similarity=0.203  Sum_probs=64.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ..+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|+..     ..+    ..+.....  ...|+||.|+
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-----~~s----~~e~~~~a--~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG-----ARS----IEEFCAKL--VKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC-----CSS----HHHHHHHS--CSSCEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE-----eCC----HHHHHhcC--CCCCEEEEeC
Confidence            357999998 99999999999999999999999999888887776431     111    23333222  2469999998


Q ss_pred             ChhhH----HHHHhcccCCCEEEEEe
Q 019196          227 GGKLT----KESLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~~~~----~~~~~~l~~~G~~v~~g  248 (344)
                      +....    ......++++..++.++
T Consensus        90 p~~~v~~vl~~l~~~l~~g~iiId~s  115 (358)
T 4e21_A           90 PAAVVDSMLQRMTPLLAANDIVIDGG  115 (358)
T ss_dssp             CGGGHHHHHHHHGGGCCTTCEEEECS
T ss_pred             CHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence            86533    34445666776776655

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.27  E-value=0.044  Score=48.01  Aligned_cols=101  Identities=14%  Similarity=0.150  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHhc----C------------Cc-EEEeCCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKSL----G------------VD-HVVDLSN  200 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~----g------------~~-~v~~~~~  200 (344)
                      ....+.++++||-.|+ |. |..+..+++..|  .+|++++.+++..+.+++.    +            .. .+...+-
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            5567889999999997 43 888888888765  6899999999877777542    1            11 2222222


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEec
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .+.   ...+    ....||+|+-....  ..+..+.+.|+++|+++....
T Consensus       177 ~~~---~~~~----~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          177 SGA---TEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             TCC---C-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             HHc---cccc----CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            221   1011    12359999865544  357889999999999997653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.25  E-value=0.0078  Score=52.11  Aligned_cols=69  Identities=16%  Similarity=0.121  Sum_probs=39.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +.+|||+|++|.+|..+++.+...|++|++++++.++ .     + ....|..+.+.   +.+..+.   .++|+||+|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~-----~-~~~~Dl~d~~~---~~~~~~~---~~~d~vih~A   68 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-P-----K-FEQVNLLDSNA---VHHIIHD---FQPHVIVHCA   68 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHH---HCCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-C-----C-eEEecCCCHHH---HHHHHHh---hCCCEEEECC
Confidence            4689999999999999999988889999999976543 0     1 11123332221   2222221   1589999998


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      +.
T Consensus        69 ~~   70 (315)
T 2ydy_A           69 AE   70 (315)
T ss_dssp             --
T ss_pred             cc
Confidence            74

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.25  E-value=0.024  Score=49.63  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=48.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH--HH---HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EK---IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~--~~---~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+|||+|++|.+|..+++.+...|++|++++++.  ..   .+.++..+....+..+-.+. +.+.++.+.   .++|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~-~~~~~~~~~---~~~d~v   77 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK-NDVTRLITK---YMPDSC   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHH---HCCSEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCH-HHHHHHHhc---cCCCEE
Confidence            3699999999999999998888999999998632  11   22223323223333322221 223333322   259999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |+|++.
T Consensus        78 ih~A~~   83 (347)
T 1orr_A           78 FHLAGQ   83 (347)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.24  E-value=0.0071  Score=52.50  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=48.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+..+|||+||+|.+|..+++.+...|++|++++++.++ +.   ++. ..+..+-.+. +.+.++.+   +.++|+||+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~-~~~~~Dl~d~-~~~~~~~~---~~~~d~vih   80 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNV-EMISLDIMDS-QRVKKVIS---DIKPDYIFH   80 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTE-EEEECCTTCH-HHHHHHHH---HHCCSEEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---cee-eEEECCCCCH-HHHHHHHH---hcCCCEEEE
Confidence            456799999999999999999988889999999988654 21   222 2222222221 22333322   235899999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      |++.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9874

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.24  E-value=0.015  Score=48.95  Aligned_cols=96  Identities=18%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             ccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          127 LPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      +||....+...+.+..---.+++++|+|++.-+|..+++++...  |++|++..+..                   .+  
T Consensus       138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------------~~--  196 (281)
T 2c2x_A          138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------------RD--  196 (281)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------------SC--
T ss_pred             CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------------hH--
Confidence            34444444444433221236889999999556799999999999  88998875432                   11  


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        +.+..     ..+|++|.++|.+.+ --.++++++..++++|...
T Consensus       197 --L~~~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          197 --LPALT-----RQADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             --HHHHH-----TTCSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             --HHHHH-----hhCCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence              22221     468999999998654 3336689998999888653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.23  E-value=0.02  Score=54.42  Aligned_cols=104  Identities=18%  Similarity=0.217  Sum_probs=65.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-H-HHHHHHhcCCcEEEeCCCC--CchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-E-KIKFLKSLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~-~~~~~~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .++.+||+|+++++|.+.++.+...|++|++.++.. + -.+.+++.|...+....+.  +..+.++++.+..  +++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~--G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY--GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH--SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc--CCCCE
Confidence            367899999999999999999999999999987432 2 2234445554443332222  1111122222222  46999


Q ss_pred             EEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccC
Q 019196          222 LYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFAS  251 (344)
Q Consensus       222 vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  251 (344)
                      ++|++|..                          ..+.++..|+  .+|+++.++...
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~a  456 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS  456 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence            99998831                          0134455553  458999988653

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.22  E-value=0.028  Score=46.16  Aligned_cols=99  Identities=15%  Similarity=0.147  Sum_probs=67.8

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHh
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .....+.++.+||-+|+ | .|..+..+++. +.+|++++.+++..+.+++.    +...+...+....   .      .
T Consensus        63 ~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~---~------~  130 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIGT-G-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG---Y------E  130 (231)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC---C------G
T ss_pred             HHhcCCCCCCEEEEEcC-C-CCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccc---c------c
Confidence            35667889999999997 4 48888888876 48999999999888887653    2112222221110   0      1


Q ss_pred             cCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEec
Q 019196          215 KLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       215 ~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ....||+|+.+..-. ....+.+.|+++|+++..-.
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            135799999766543 34678899999999988753

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.22  E-value=0.009  Score=52.25  Aligned_cols=88  Identities=22%  Similarity=0.213  Sum_probs=66.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++.++.+.++++|+..    .  +    ..++..     ..|+|+.+
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~--~----l~ell~-----~aDvV~l~  207 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ----V--A----CSELFA-----SSDFILLA  207 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE----C--C----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee----C--C----HHHHHh-----hCCEEEEc
Confidence            4679999999 99999999999999999999998875555666666421    1  1    333332     47999999


Q ss_pred             CCh-----hhH-HHHHhcccCCCEEEEEec
Q 019196          226 VGG-----KLT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~-----~~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      ++.     ..+ ...+..|+++..++.++.
T Consensus       208 ~P~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          208 LPLNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            873     123 568899999999988763

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.21  E-value=0.041  Score=46.63  Aligned_cols=98  Identities=14%  Similarity=0.136  Sum_probs=67.6

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhc-----CCcE--EEeCCCCCchhhHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL-----GVDH--VVDLSNESVIPSVKE  209 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~-----g~~~--v~~~~~~~~~~~~~~  209 (344)
                      .....++++++||-.|+  +.|..+..+++..  +.+|++++.+++..+.+++.     |.+.  +...+-.+.      
T Consensus       103 ~~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~------  174 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF------  174 (275)
T ss_dssp             ---CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC------
T ss_pred             HHHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc------
Confidence            35567889999999987  4688888888873  67999999999888777542     4321  221111111      


Q ss_pred             HHHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          210 FLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                          .....||+|+-....  ..+..+.+.|+++|+++...
T Consensus       175 ----~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          175 ----ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             ----CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ----CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence                123469999976654  46788999999999998865

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.20  E-value=0.023  Score=49.97  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=49.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH----HHHHHH-hc-----CCcEEEeCCCCCchhhHHHHHHHhcC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLK-SL-----GVDHVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~----~~~~~~-~~-----g~~~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      +.+|||+|++|.+|..++..+...|++|++++++..    +.+.+. .+     ..-..+..+-.+    ...+....  
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~--  100 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN----LDDCNNAC--  100 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS----HHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC----HHHHHHHh--
Confidence            468999999999999999998888999999998642    233222 11     111233332222    12232322  


Q ss_pred             CCccEEEeCCCh
Q 019196          217 KGVDVLYDPVGG  228 (344)
Q Consensus       217 ~~~d~vid~~g~  228 (344)
                      .++|+||+|++.
T Consensus       101 ~~~d~vih~A~~  112 (352)
T 1sb8_A          101 AGVDYVLHQAAL  112 (352)
T ss_dssp             TTCSEEEECCSC
T ss_pred             cCCCEEEECCcc
Confidence            279999999873

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.20  E-value=0.028  Score=51.61  Aligned_cols=93  Identities=14%  Similarity=0.188  Sum_probs=59.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +++|+|+|+ |++|..++..+... +.+|++.+++.++.+.+.+ .+.. .+..+-.+. +.+.+..     .++|+|++
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~-~~~~D~~d~-~~l~~~l-----~~~DvVIn   94 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSK-AISLDVTDD-SALDKVL-----ADNDVVIS   94 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCE-EEECCTTCH-HHHHHHH-----HTSSEEEE
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCc-EEEEecCCH-HHHHHHH-----cCCCEEEE
Confidence            568999998 99999999888877 6799999999887765543 3332 222222222 1122222     26899999


Q ss_pred             CCChhhHH-HHHhcccCCCEEEEE
Q 019196          225 PVGGKLTK-ESLKLLNWGAQILVI  247 (344)
Q Consensus       225 ~~g~~~~~-~~~~~l~~~G~~v~~  247 (344)
                      |++..... ....+++++-.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CCchhhhHHHHHHHHhcCCEEEEe
Confidence            99864322 233455666666654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.20  E-value=0.022  Score=50.20  Aligned_cols=87  Identities=20%  Similarity=0.245  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..+++.++..|++|++.+++. +.+.+.+.|+..+     .+    .+++..     ..|+|+.+
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~-----~~----l~ell~-----~aDiV~l~  222 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA-----ES----KDALFE-----QSDVLSVH  222 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC-----SS----HHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe-----CC----HHHHHh-----hCCEEEEe
Confidence            3679999999 9999999999999999999999875 3455666776321     11    333332     47999998


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++. +    .+ ...+..|+++..++.++
T Consensus       223 ~Plt~~t~~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          223 LRLNDETRSIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            863 1    22 56789999999999887

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.20  E-value=0.044  Score=46.39  Aligned_cols=88  Identities=19%  Similarity=0.220  Sum_probs=59.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ...+++++|+|+ |+.|.+++..+...|+ +|++..++.+|.+.+ ++++..  +.  . ..           ....+|+
T Consensus       116 ~~~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~--~-~~-----------~~~~~Di  178 (271)
T 1npy_A          116 LNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YI--N-SL-----------ENQQADI  178 (271)
T ss_dssp             CCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EE--S-CC-----------TTCCCSE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cc--h-hh-----------hcccCCE
Confidence            445678999999 9999999999999998 899999998875544 566642  11  0 11           0136899


Q ss_pred             EEeCCChhhHH--------HHHhcccCCCEEEEEe
Q 019196          222 LYDPVGGKLTK--------ESLKLLNWGAQILVIG  248 (344)
Q Consensus       222 vid~~g~~~~~--------~~~~~l~~~G~~v~~g  248 (344)
                      |++|++.....        .....++++..++++.
T Consensus       179 vInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv  213 (271)
T 1npy_A          179 LVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV  213 (271)
T ss_dssp             EEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC
T ss_pred             EEECCCCCccCccccCCCCCCHHHcCCCCEEEEee
Confidence            99999864321        1123455666666553

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.18  E-value=0.026  Score=48.91  Aligned_cols=91  Identities=15%  Similarity=0.255  Sum_probs=57.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH------HHHHHHH---hcCCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA------EKIKFLK---SLGVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~------~~~~~~~---~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      .+|||+|++|.+|..+++.+...|.+|++++++.      ++.+.++   ..+.. ++..+-.+    .+.+....  .+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d----~~~l~~a~--~~   77 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEE----HEKMVSVL--KQ   77 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTC----HHHHHHHH--TT
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCC----HHHHHHHH--cC
Confidence            5699999999999999998888899999999875      3333332   33443 33333222    22333333  35


Q ss_pred             ccEEEeCCChh---hHHHHHhcccCC---CEEE
Q 019196          219 VDVLYDPVGGK---LTKESLKLLNWG---AQIL  245 (344)
Q Consensus       219 ~d~vid~~g~~---~~~~~~~~l~~~---G~~v  245 (344)
                      +|+||+|++..   ....+++.++..   ++++
T Consensus        78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           78 VDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            99999999852   223444444433   3666

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.17  E-value=0.013  Score=51.51  Aligned_cols=70  Identities=26%  Similarity=0.225  Sum_probs=47.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|||+||+|.+|..+++.+...|++|++++++.++      .+... +..+-.+    ...+....  .++|+||.+
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~-~~~Dl~d----~~~~~~~~--~~~d~vih~   84 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEE-VVGSLED----GQALSDAI--MGVSAVLHL   84 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSE-EESCTTC----HHHHHHHH--TTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccE-EecCcCC----HHHHHHHH--hCCCEEEEC
Confidence            45689999999999999999999999999999988654      23322 2222222    22233332  279999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      ++.
T Consensus        85 A~~   87 (347)
T 4id9_A           85 GAF   87 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.17  E-value=0.048  Score=45.37  Aligned_cols=77  Identities=23%  Similarity=0.278  Sum_probs=54.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|+|.|++|.+|...++.+... +.++++.....+..+.+...+++.++|+..++.   ..+........+.++|+-++|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a---~~~~~~~a~~~g~~~VigTTG   78 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDV---VMGNLEFLIDNGIHAVVGTTG   78 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTT---HHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHH---HHHHHHHHHHcCCCEEEcCCC
Confidence            5899999999999999988765 788876665443333333346788888877665   444444444467888888887


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      -
T Consensus        79 ~   79 (245)
T 1p9l_A           79 F   79 (245)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.15  E-value=0.012  Score=51.26  Aligned_cols=88  Identities=17%  Similarity=0.127  Sum_probs=65.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|.|+|. |.+|...++.++..|++|++.++ +.++ ..++++|+..   .  .+    .+++.     ...|+|+.
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~---~--~~----l~ell-----~~aDvVil  208 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF---H--DS----LDSLL-----SVSQFFSL  208 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE---C--SS----HHHHH-----HHCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE---c--CC----HHHHH-----hhCCEEEE
Confidence            4679999999 99999999999999999999998 7665 3556677631   1  11    23333     24799999


Q ss_pred             CCChh-----hH-HHHHhcccCCCEEEEEec
Q 019196          225 PVGGK-----LT-KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (344)
                      +++..     .+ ...+..+++++.++.++.
T Consensus       209 ~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          209 NAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             eccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            98742     23 457788999988888764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.15  E-value=0.028  Score=48.27  Aligned_cols=85  Identities=18%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+++.|...   ..  +    ..+..     ..+|+||.|++.
T Consensus         7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~---~~--~----~~~~~-----~~~D~vi~~v~~   71 (299)
T 1vpd_A            7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET---AS--T----AKAIA-----EQCDVIITMLPN   71 (299)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE---CS--S----HHHHH-----HHCSEEEECCSS
T ss_pred             eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee---cC--C----HHHHH-----hCCCEEEEECCC
Confidence            6999998 99999999988888999999999998888777766421   11  1    22222     247999999984


Q ss_pred             -hhHHHHH-------hcccCCCEEEEEe
Q 019196          229 -KLTKESL-------KLLNWGAQILVIG  248 (344)
Q Consensus       229 -~~~~~~~-------~~l~~~G~~v~~g  248 (344)
                       ......+       ..++++..++.++
T Consensus        72 ~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           72 SPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence             4444333       5677777776654

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.15  E-value=0.013  Score=51.33  Aligned_cols=87  Identities=16%  Similarity=0.159  Sum_probs=62.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+.+|.|+|. |.+|...++.++..|.+|++.+++.++.+.+.+.|....      +    ..+..     ...|+|+.+
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~----l~e~l-----~~aDvVi~~  217 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------S----TPELA-----AQSDFIVVA  217 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------C----HHHHH-----HHCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------C----HHHHH-----hhCCEEEEe
Confidence            3679999999 999999999999999999999987765555666654321      1    22322     247999998


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++..     .+ ...+..++++..++.++
T Consensus       218 vp~~~~t~~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          218 CSLTPATEGLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             CCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8742     22 45667888888777654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.15  E-value=0.021  Score=49.04  Aligned_cols=75  Identities=20%  Similarity=0.199  Sum_probs=51.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHH--HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKI--KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .++|||+|++|.+|..+++.+...| .+|+++++++++.  +.+...+.. ++..+-.+    ...+....  .++|.||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~-~~~~D~~d----~~~l~~~~--~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE-VVQGDQDD----QVIMELAL--NGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCE-EEECCTTC----HHHHHHHH--TTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCE-EEEecCCC----HHHHHHHH--hcCCEEE
Confidence            4689999999999999998887778 8999999987653  233344543 33332222    22333333  3699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      ++++.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            99874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.15  E-value=0.014  Score=49.67  Aligned_cols=90  Identities=16%  Similarity=0.133  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|||+|+ |.+|..++..+...|.+|+++++++++...+...+... +..+-.+.    .       -.++|+||.|++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~D~~d~----~-------~~~~d~vi~~a~   72 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEP-LLWPGEEP----S-------LDGVTHLLISTA   72 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEE-EESSSSCC----C-------CTTCCEEEECCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeE-EEeccccc----c-------cCCCCEEEECCC
Confidence            57999998 99999999999888999999999998877776665433 33332222    1       257999999987


Q ss_pred             hh-----hHHHHHhcccC----CCEEEEEecc
Q 019196          228 GK-----LTKESLKLLNW----GAQILVIGFA  250 (344)
Q Consensus       228 ~~-----~~~~~~~~l~~----~G~~v~~g~~  250 (344)
                      ..     .....++.++.    -.+++.++..
T Consensus        73 ~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           73 PDSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             CBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             ccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence            41     22334444433    3688887743

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.14  E-value=0.014  Score=51.17  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=48.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|||+|++|.+|..+++.+...|++|++++++.++.+.+...+.. .+..+-.+    ...+.+..  .++|+||+|++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d----~~~~~~~~--~~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE-CRVAEMLD----HAGLERAL--RGLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCE-EEECCTTC----HHHHHHHT--TTCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeE-EEEecCCC----HHHHHHHH--cCCCEEEECCc
Confidence            3799999999999999999888899999999987654333332332 33332222    22333333  36999999987


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.14  E-value=0.037  Score=46.69  Aligned_cols=102  Identities=14%  Similarity=0.262  Sum_probs=69.4

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC---cEEEeCCCCCchhhHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEF  210 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~  210 (344)
                      +.....+.++.+||-+|+  |.|..+..+++..+++|++++.+++..+.+++    .|.   ..+...+-.+.   .   
T Consensus        53 l~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~---  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL---P---  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C---
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC---C---
Confidence            345667889999999997  45888888998889999999999887776653    232   12222222111   0   


Q ss_pred             HHHhcCCCccEEEeCCC-----h--hhHHHHHhcccCCCEEEEEecc
Q 019196          211 LKARKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                         .....||+|+-...     .  ..+..+.+.|+|+|+++.....
T Consensus       125 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~  168 (273)
T 3bus_A          125 ---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFV  168 (273)
T ss_dssp             ---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred             ---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence               12347999985322     1  3567788999999999876643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.14  E-value=0.029  Score=48.98  Aligned_cols=37  Identities=27%  Similarity=0.223  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .+++|||+||+|.+|..++..+...|++|++++++.+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   40 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT   40 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            3578999999999999999888888999999888765

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.13  E-value=0.038  Score=43.56  Aligned_cols=98  Identities=10%  Similarity=0.158  Sum_probs=65.1

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ...++++++||=+|+  |.|..+..+++. +.+|++++.+++..+.+++    .|..  .++. .+  .    ..+... 
T Consensus        17 ~~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~--~----~~l~~~-   85 (185)
T 3mti_A           17 AEVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG--H----ENLDHY-   85 (185)
T ss_dssp             HTTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC--G----GGGGGT-
T ss_pred             HHhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc--H----HHHHhh-
Confidence            445788999999886  458888888887 8899999999987777643    3432  2222 11  1    111111 


Q ss_pred             cCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEec
Q 019196          215 KLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       215 ~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ....||+|+-+.+.                ..+..+.+.|+|+|+++.+..
T Consensus        86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            23569999765321                234777899999999988653

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.12  E-value=0.017  Score=49.19  Aligned_cols=89  Identities=26%  Similarity=0.328  Sum_probs=60.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+.+++|+|+ |++|.+++..+...|++|++..++.++.+.+ +++|.. +  ..  +.    .+.     -..+|+|++
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~--~~--~~----~~~-----~~~aDiVi~  192 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-V--VN--SP----EEV-----IDKVQVIVN  192 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-E--CS--CG----GGT-----GGGCSEEEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-e--eh--hH----Hhh-----hcCCCEEEE
Confidence            4678999998 9999999999988899999999998876554 345531 1  11  11    111     136899999


Q ss_pred             CCChhhHH---HH--HhcccCCCEEEEEec
Q 019196          225 PVGGKLTK---ES--LKLLNWGAQILVIGF  249 (344)
Q Consensus       225 ~~g~~~~~---~~--~~~l~~~G~~v~~g~  249 (344)
                      |++.....   ..  ...++++..++++..
T Consensus       193 atp~~~~~~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          193 TTSVGLKDEDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             CSSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred             eCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99864321   11  355677777766543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.12  E-value=0.027  Score=45.41  Aligned_cols=98  Identities=11%  Similarity=0.078  Sum_probs=62.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CC-----------------cEEEeCCCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GV-----------------DHVVDLSNE  201 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~-----------------~~v~~~~~~  201 (344)
                      ....+.++.+||-.|+  |.|..+..+++. |++|++++.+++-.+.+++. +.                 -.....+-.
T Consensus        16 ~~l~~~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            4445678899999986  557777788875 89999999999887777542 11                 112211212


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCCh-----h----hHHHHHhcccCCCEEEEEe
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGG-----K----LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-----~----~~~~~~~~l~~~G~~v~~g  248 (344)
                      +..  ..      ....||+|++...-     +    .+..+.+.|+|+|+++.+.
T Consensus        93 ~l~--~~------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           93 ALT--AR------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             SST--HH------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cCC--cc------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            210  00      00369999974321     1    3467889999999944443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.10  E-value=0.031  Score=47.41  Aligned_cols=71  Identities=21%  Similarity=0.280  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCC--c-EEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--D-HVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+++++|+|+ |++|.+++..+...|++|++..++.++.+.+ ++++.  . ...+..         ++   .. ..+|+
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~---------~~---~~-~~~Di  183 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD---------SI---PL-QTYDL  183 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---------GC---CC-SCCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHH---------Hh---cc-CCCCE
Confidence            5689999999 9999999999998999999999998876555 34432  1 122210         00   01 36999


Q ss_pred             EEeCCChhh
Q 019196          222 LYDPVGGKL  230 (344)
Q Consensus       222 vid~~g~~~  230 (344)
                      +++|++...
T Consensus       184 vIn~t~~~~  192 (272)
T 1p77_A          184 VINATSAGL  192 (272)
T ss_dssp             EEECCCC--
T ss_pred             EEECCCCCC
Confidence            999998644

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=96.10  E-value=0.027  Score=48.84  Aligned_cols=35  Identities=26%  Similarity=0.266  Sum_probs=31.3

Q ss_pred             CCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~--~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .++++||+|+  ++++|..+++.+...|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            4688999998  8999999999998899999998864

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.09  E-value=0.072  Score=43.01  Aligned_cols=97  Identities=12%  Similarity=0.047  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ..+.++.+||-+|+  |.|..+..+++. |+++++++.+++..+.+++.+...  +...+-.+.          .....|
T Consensus        42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~----------~~~~~~  108 (218)
T 3ou2_A           42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW----------TPDRQW  108 (218)
T ss_dssp             TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC----------CCSSCE
T ss_pred             hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC----------CCCCce
Confidence            34778889999997  448888888877 889999999999888887765221  222222111          134579


Q ss_pred             cEEEeCCCh---------hhHHHHHhcccCCCEEEEEeccC
Q 019196          220 DVLYDPVGG---------KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      |+|+....-         ..+..+.+.|+++|.++......
T Consensus       109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  149 (218)
T 3ou2_A          109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD  149 (218)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred             eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            999865431         23567789999999999876543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.08  E-value=0.023  Score=48.54  Aligned_cols=86  Identities=20%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|....     .+    ..+..     ...|+||.|++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~----~~~~~-----~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----AT----PCEVV-----ESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SS----HHHHH-----HHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CC----HHHHH-----hcCCEEEEEcC
Confidence            47899999 999999999999999999999999998888877765321     11    22222     23689999988


Q ss_pred             h-hhHHHH-------HhcccCCCEEEEEe
Q 019196          228 G-KLTKES-------LKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~-~~~~~~-------~~~l~~~G~~v~~g  248 (344)
                      . ......       ...++++..++.++
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            4 344333       35667776666653

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.07  E-value=0.036  Score=46.22  Aligned_cols=98  Identities=14%  Similarity=0.138  Sum_probs=67.8

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHH
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...+.++.+||-+|+  |.|..+..+++..+.+|++++.+++..+.+++    .|..   .+...+-.+.   .      
T Consensus        41 l~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~------  109 (257)
T 3f4k_A           41 INELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL---P------  109 (257)
T ss_dssp             SCCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---S------
T ss_pred             HhcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC---C------
Confidence            336788899999997  46889999999887799999999987776643    3422   2222222221   0      


Q ss_pred             hcCCCccEEEeCCC-----h-hhHHHHHhcccCCCEEEEEec
Q 019196          214 RKLKGVDVLYDPVG-----G-KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       214 ~~~~~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .....||+|+....     . ..+..+.+.|+|+|+++....
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  151 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA  151 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            12357999975322     1 356788899999999988764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.07  E-value=0.024  Score=49.10  Aligned_cols=91  Identities=21%  Similarity=0.261  Sum_probs=57.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHHHH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFL---KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      ++|||+|++|.+|..++..+...|.+|++++++.+ +.+.+   ...+.. ++..+-.+    .+.+....  .++|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~d----~~~l~~a~--~~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDE----HEKLVELM--KKVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCE-EEECCTTC----HHHHHHHH--TTCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCE-EEEecCCC----HHHHHHHH--cCCCEEE
Confidence            46999999999999999998888999999998864 33333   334543 33333222    22333333  3699999


Q ss_pred             eCCChh---hHHHHHhcccCC---CEEE
Q 019196          224 DPVGGK---LTKESLKLLNWG---AQIL  245 (344)
Q Consensus       224 d~~g~~---~~~~~~~~l~~~---G~~v  245 (344)
                      .+++..   ....+++.++..   ++++
T Consensus        85 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           85 SALAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             ECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             ECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            999852   223344444332   3665

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.07  E-value=0.027  Score=49.40  Aligned_cols=91  Identities=12%  Similarity=0.046  Sum_probs=62.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|.|+|. |.+|...+..++..|.+|++.++++++.+.++++|+...     .+    ..+..... ....|+||-|++
T Consensus         9 ~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~-----~~----~~e~~~~a-~~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS-----AD----LEATLQRA-AAEDALIVLAVP   77 (341)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE-----SC----HHHHHHHH-HHTTCEEEECSC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee-----CC----HHHHHHhc-ccCCCEEEEeCC
Confidence            46999998 999999999999999999999999999988888887421     11    22222111 124699999998


Q ss_pred             hhhHHHHH---hcccCCCEEEEEec
Q 019196          228 GKLTKESL---KLLNWGAQILVIGF  249 (344)
Q Consensus       228 ~~~~~~~~---~~l~~~G~~v~~g~  249 (344)
                      .......+   ..++++..+++++.
T Consensus        78 ~~~~~~vl~~l~~~~~~~iv~Dv~S  102 (341)
T 3ktd_A           78 MTAIDSLLDAVHTHAPNNGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEECCS
T ss_pred             HHHHHHHHHHHHccCCCCEEEEcCC
Confidence            64433222   22356666666653

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.07  E-value=0.018  Score=50.97  Aligned_cols=85  Identities=19%  Similarity=0.281  Sum_probs=63.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      |++|.|+|. |.+|..+++.++..|++|++.+++. +.+.+.+.|+..    .  +    ++++.     ...|+|+.++
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~~-~~~~~~~~g~~~----~--~----l~ell-----~~aDvV~l~~  238 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPWL-PRSMLEENGVEP----A--S----LEDVL-----TKSDFIFVVA  238 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSSS-CHHHHHHTTCEE----C--C----HHHHH-----HSCSEEEECS
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCCEEEEECCCC-CHHHHhhcCeee----C--C----HHHHH-----hcCCEEEEcC
Confidence            779999999 9999999999999999999999874 344556667531    1  1    33333     2479999887


Q ss_pred             Chh-----hH-HHHHhcccCCCEEEEEe
Q 019196          227 GGK-----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~~-----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      +..     .+ ...+..|++++.++.++
T Consensus       239 Plt~~T~~li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          239 AVTSENKRFLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             CSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred             cCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence            642     22 56788899999888876

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.06  E-value=0.049  Score=47.36  Aligned_cols=87  Identities=14%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ..+|.|+|. |.+|...++.+...|.+|++.++++++.+.+.+.|+...-     +    ..+..     ...|+||.|+
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~-----~----~~e~~-----~~aDvVi~~v   95 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHE-----Q----ARAAA-----RDADIVVSML   95 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEES-----S----HHHHH-----TTCSEEEECC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeC-----C----HHHHH-----hcCCEEEEEC
Confidence            358999999 9999999999998999999999999988888777753211     1    22221     3578999888


Q ss_pred             Ch-hhHHH------HHhcccCCCEEEEEe
Q 019196          227 GG-KLTKE------SLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~-~~~~~------~~~~l~~~G~~v~~g  248 (344)
                      +. .....      .+..++++..++.++
T Consensus        96 p~~~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           96 ENGAVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             SSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence            85 33333      334567777776654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.05  E-value=0.023  Score=48.69  Aligned_cols=90  Identities=21%  Similarity=0.236  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc---E---EEeCCCCCchhhHHHHHHHhcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD---H---VVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~---~---v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      .+++++|+|+ |++|.+++..+...| +|+++.++.++.+.+ ++++..   .   .++..+  +         ...-..
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~--~---------~~~~~~  193 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--L---------DVDLDG  193 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC--T---------TCCCTT
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee--H---------HHhhCC
Confidence            4689999999 799999999999899 999999988776544 333210   0   011111  0         011246


Q ss_pred             ccEEEeCCChhhHH------H-HHhcccCCCEEEEEe
Q 019196          219 VDVLYDPVGGKLTK------E-SLKLLNWGAQILVIG  248 (344)
Q Consensus       219 ~d~vid~~g~~~~~------~-~~~~l~~~G~~v~~g  248 (344)
                      +|++++|+|.....      . ....++++..++++.
T Consensus       194 ~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          194 VDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             CCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            99999999864321      1 134566776677665

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.05  E-value=0.015  Score=50.50  Aligned_cols=101  Identities=22%  Similarity=0.327  Sum_probs=67.6

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .....++++++||-+|+ |. |..+..+++..+  .+|++++.+++..+.+++    .|...+ .....+..+..     
T Consensus        68 ~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d~~~~~-----  139 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGDGYYGV-----  139 (317)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCC-----
T ss_pred             HHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECChhhcc-----
Confidence            35677889999999997 43 888888887653  469999999988777754    343321 11111221100     


Q ss_pred             HhcCCCccEEEeCCChhh-HHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||+|+.....+. ...+.+.|+|+|+++..-
T Consensus       140 -~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          140 -PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             -GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             -ccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence             01246999998766533 367789999999988763

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.05  E-value=0.047  Score=46.66  Aligned_cols=86  Identities=17%  Similarity=0.079  Sum_probs=56.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+|.|+|+ |.+|...+..+...  +.+|++.++++++.+.+++.|.. .... +..+.   +         ...|+||.
T Consensus         7 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-~~~~~---~---------~~aDvVil   72 (290)
T 3b1f_A            7 KTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATA-DFKVF---A---------ALADVIIL   72 (290)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEES-CTTTT---G---------GGCSEEEE
T ss_pred             ceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccC-CHHHh---h---------cCCCEEEE
Confidence            47999998 99999998887766  57999999999888888777753 2221 11111   0         25788888


Q ss_pred             CCChhhHHH----HHhc-ccCCCEEEEE
Q 019196          225 PVGGKLTKE----SLKL-LNWGAQILVI  247 (344)
Q Consensus       225 ~~g~~~~~~----~~~~-l~~~G~~v~~  247 (344)
                      |+.......    .... ++++..++.+
T Consensus        73 avp~~~~~~v~~~l~~~~l~~~~ivi~~  100 (290)
T 3b1f_A           73 AVPIKKTIDFIKILADLDLKEDVIITDA  100 (290)
T ss_dssp             CSCHHHHHHHHHHHHTSCCCTTCEEECC
T ss_pred             cCCHHHHHHHHHHHHhcCCCCCCEEEEC
Confidence            888644333    3334 5555555543

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.05  E-value=0.05  Score=48.13  Aligned_cols=88  Identities=20%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEE-ecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAV-ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      -+|.|+|. |.+|...+..++.. +++++++ ++++++.+.++++|...   +.  +    .++++.   ...+|+|+.|
T Consensus         6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~--~----~~~ll~---~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YE--S----YEAVLA---DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CS--C----HHHHHH---CTTCCEEEEC
T ss_pred             CcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eC--C----HHHHhc---CCCCCEEEEc
Confidence            37899999 99998888777766 6787654 66777777677777531   11  2    344432   3479999999


Q ss_pred             CChh-hHHHHHhcccCCCEEEEEec
Q 019196          226 VGGK-LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ++.. ..+.+..+++.+ +-|++..
T Consensus        73 tp~~~h~~~~~~al~aG-khVl~EK   96 (359)
T 3e18_A           73 TPNDSHKELAISALEAG-KHVVCEK   96 (359)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEES
T ss_pred             CCcHHHHHHHHHHHHCC-CCEEeeC
Confidence            9874 556666777654 5555553

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.05  E-value=0.036  Score=46.43  Aligned_cols=94  Identities=23%  Similarity=0.289  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      +.++++||-+|+ |. |..+..+++ .|++|++++.++...+.+++    .+..  +.....+.    .+.   .....|
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~----~~~---~~~~~f  185 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSL----EAA---LPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCH----HHH---GGGCCE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECCh----hhc---CcCCCC
Confidence            678899999997 43 777777776 57799999999987777754    3432  11111222    111   123579


Q ss_pred             cEEEeCCCh----hhHHHHHhcccCCCEEEEEec
Q 019196          220 DVLYDPVGG----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       220 d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      |+|+.+...    ..+..+.+.|+|+|+++..+.
T Consensus       186 D~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          186 DLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            999976543    345778899999999998664

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=96.02  E-value=0.054  Score=47.42  Aligned_cols=88  Identities=22%  Similarity=0.264  Sum_probs=63.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcE---------EEeCCCCCchhhHHHHHHHhcCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH---------VVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~---------v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ..+|.|+|+ |.+|.+.+..+...|.+|++.++++++.+.+++.|...         ... .  +.    .      .-.
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~-~--~~----~------~~~   79 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRAT-N--DL----E------EIK   79 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEE-S--CG----G------GCC
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEe-C--CH----H------Hhc
Confidence            457999999 99999999888888999999999988888777655311         010 0  11    0      014


Q ss_pred             CccEEEeCCChhhHHHHHhccc-CCCEEEEEe
Q 019196          218 GVDVLYDPVGGKLTKESLKLLN-WGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l~-~~G~~v~~g  248 (344)
                      ..|+||-|+....+..++..++ ++..++.+.
T Consensus        80 ~aDvVil~vk~~~~~~v~~~l~~~~~~vv~~~  111 (335)
T 1z82_A           80 KEDILVIAIPVQYIREHLLRLPVKPSMVLNLS  111 (335)
T ss_dssp             TTEEEEECSCGGGHHHHHTTCSSCCSEEEECC
T ss_pred             CCCEEEEECCHHHHHHHHHHhCcCCCEEEEEe
Confidence            6899999999888888777666 444566554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.01  E-value=0.041  Score=49.22  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=30.9

Q ss_pred             CEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAE  182 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~-~~g~~v~~~~~~~~  182 (344)
                      .+|||+|++|.+|..+++.+. ..|++|++++++..
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            479999999999999998887 88999999987643

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.00  E-value=0.033  Score=46.66  Aligned_cols=98  Identities=16%  Similarity=0.222  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc--EEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD--HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ......++.+||-+|+  |.|..+..+++. +.+|++++.+++..+.+++    .+..  .....+....   .      
T Consensus        31 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l---~------   98 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM---P------   98 (260)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC---C------
T ss_pred             HHhCCCCCCEEEEEeC--CCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC---C------
Confidence            4556778999999997  367777777775 4599999999987777654    2322  2222222111   0      


Q ss_pred             hcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          214 RKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       214 ~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .....||+|+.+..-       ..+..+.+.|+|+|.++....
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            123579999976442       356788899999999988654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=95.99  E-value=0.032  Score=59.04  Aligned_cols=81  Identities=17%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEE-ecCHHHHHHH-----Hhc---CCcE-EEeCCCCCchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAV-ARGAEKIKFL-----KSL---GVDH-VVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~-~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~-----~~~---g~~~-v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .++++||+|++++ +|..++..+...|++|+++ .++.++.+.+     +++   |... ++..+-. -.+.++.+....
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVs-d~~sV~alv~~i  752 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQG-SKQDVEALIEFI  752 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCC-CHHHHHHHHHHH
Confidence            5789999999998 9999999998899999988 4655544322     222   3332 2222222 223344444432


Q ss_pred             cC-------C-CccEEEeCCC
Q 019196          215 KL-------K-GVDVLYDPVG  227 (344)
Q Consensus       215 ~~-------~-~~d~vid~~g  227 (344)
                      ..       + .+|++|+++|
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCC
T ss_pred             HHhccccccCCCCeEEEECCC
Confidence            11       2 5999999987

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.98  E-value=0.033  Score=45.91  Aligned_cols=100  Identities=19%  Similarity=0.245  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ....++||++||=+|+  +.|..+..+++..|.  +|++++.+++..+.+++.    +--..+..+......    .  .
T Consensus        71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~----~--~  142 (233)
T 4df3_A           71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK----Y--R  142 (233)
T ss_dssp             SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG----G--T
T ss_pred             hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc----c--c
Confidence            4567899999999997  568889999998764  899999999877777542    211122222222100    0  0


Q ss_pred             hcCCCccEEEeCCCh-----hhHHHHHhcccCCCEEEEE
Q 019196          214 RKLKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       214 ~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  247 (344)
                      .....+|+||.....     ..+..+.+.|+|+|+++..
T Consensus       143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            112468998865543     2456778899999999875

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.97  E-value=0.02  Score=50.14  Aligned_cols=86  Identities=22%  Similarity=0.339  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+.+|.|+|. |.+|...++.++..|.+|++.+++.++ +.++++|...    .  +    ..+..     ...|+|+.|
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~--~----l~~~l-----~~aDvVil~  211 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF----K--P----LEDLL-----RESDFVVLA  211 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE----C--C----HHHHH-----HHCSEEEEC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc----C--C----HHHHH-----hhCCEEEEC
Confidence            4679999999 999999999999999999999998776 5556666521    1  2    23322     247999999


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++..     .+ ...+..++++..++.++
T Consensus       212 vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          212 VPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            8752     22 45678889988887765

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.96  E-value=0.078  Score=45.32  Aligned_cols=97  Identities=20%  Similarity=0.090  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC---cEEEeCCCCCchhhHHHHHHHhc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .+.++.+||-+|+  |.|..+..+++..|+++++++.+++..+.+++    .|.   ..+...+-.+.   .      ..
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~------~~  147 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI---P------CE  147 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC---S------SC
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC---C------CC
Confidence            7789999999997  47888888888878999999999887766643    232   12222221111   0      12


Q ss_pred             CCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEecc
Q 019196          216 LKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       216 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ...||+|+....-       ..+..+.+.|+|+|+++.....
T Consensus       148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  189 (297)
T 2o57_A          148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  189 (297)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence            3469999865432       3467888999999999887643

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=95.96  E-value=0.035  Score=58.66  Aligned_cols=82  Identities=22%  Similarity=0.246  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEe-cCHHHHHH----H-Hhc---CCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAVA-RGAEKIKF----L-KSL---GVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~-~G~~~~~~~~~~g~~v~~~~-~~~~~~~~----~-~~~---g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .++++||+|++++ +|..++..+...|++|++++ ++.++...    + +++   |....+-.-+..-.+.+.++.....
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5789999999998 99999999988999999885 54444321    1 333   4332222122222233444444322


Q ss_pred             -----CC-CccEEEeCCC
Q 019196          216 -----LK-GVDVLYDPVG  227 (344)
Q Consensus       216 -----~~-~~d~vid~~g  227 (344)
                           .+ .+|++|+++|
T Consensus       731 ~~~~~~G~~IDiLVnNAG  748 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAA  748 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCC
T ss_pred             HhhcccCCCCcEEEeCcc
Confidence                 22 5999999987

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.96  E-value=0.086  Score=40.75  Aligned_cols=99  Identities=17%  Similarity=0.086  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .++++.+||-+|+ |. |..+..+++..  +.++++++.++ ..+    ..-..+...+-.+. ...+.+........||
T Consensus        19 ~~~~~~~vLd~G~-G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~----~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~D   90 (180)
T 1ej0_A           19 LFKPGMTVVDLGA-AP-GGWSQYVVTQIGGKGRIIACDLLP-MDP----IVGVDFLQGDFRDE-LVMKALLERVGDSKVQ   90 (180)
T ss_dssp             CCCTTCEEEEESC-TT-CHHHHHHHHHHCTTCEEEEEESSC-CCC----CTTEEEEESCTTSH-HHHHHHHHHHTTCCEE
T ss_pred             CCCCCCeEEEeCC-CC-CHHHHHHHHHhCCCCeEEEEECcc-ccc----cCcEEEEEcccccc-hhhhhhhccCCCCcee
Confidence            3678899999997 43 88888888885  47999999876 222    11112222222221 1112222223446799


Q ss_pred             EEEeCC-----C-------------hhhHHHHHhcccCCCEEEEEec
Q 019196          221 VLYDPV-----G-------------GKLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       221 ~vid~~-----g-------------~~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      +|+...     +             ...+..+.+.|+++|.++....
T Consensus        91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            999732     2             1345667889999999987654

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.95  E-value=0.085  Score=43.13  Aligned_cols=98  Identities=19%  Similarity=0.260  Sum_probs=64.7

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHHhc
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ...++++.+||=.|+ |..|..+..+++..+.+|++++.+++..+.+++    .+. ..++..+.....    .    ..
T Consensus        50 ~~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~----~----~~  120 (230)
T 3evz_A           50 KTFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK----G----VV  120 (230)
T ss_dssp             HTTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSST----T----TC
T ss_pred             HhhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhh----h----cc
Confidence            344678999999987 446888888887768899999999987777653    342 223333211110    0    12


Q ss_pred             CCCccEEEeCCC--------------------------hhhHHHHHhcccCCCEEEEE
Q 019196          216 LKGVDVLYDPVG--------------------------GKLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       216 ~~~~d~vid~~g--------------------------~~~~~~~~~~l~~~G~~v~~  247 (344)
                      ...||+|+-.-.                          ...+..+.+.|+++|+++.+
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            357999985421                          23457778899999998875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.91  E-value=0.048  Score=44.97  Aligned_cols=94  Identities=9%  Similarity=0.119  Sum_probs=62.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      ....+++|.|+ |.+|..+++.+...|. |+++++++++.+.++ .|.. ++..+..+     .+.+....-.++|.++-
T Consensus         7 ~~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~-~i~gd~~~-----~~~l~~a~i~~ad~vi~   77 (234)
T 2aef_A            7 AKSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGAN-FVHGDPTR-----VSDLEKANVRGARAVIV   77 (234)
T ss_dssp             ---CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCE-EEESCTTC-----HHHHHHTTCTTCSEEEE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCe-EEEcCCCC-----HHHHHhcCcchhcEEEE
Confidence            44568999999 9999999999888888 999999888877777 6643 44433322     12333334467999999


Q ss_pred             CCChhhH----HHHHhcccCCCEEEEE
Q 019196          225 PVGGKLT----KESLKLLNWGAQILVI  247 (344)
Q Consensus       225 ~~g~~~~----~~~~~~l~~~G~~v~~  247 (344)
                      +++.+..    ....+.+.+..+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~~~iia~  104 (234)
T 2aef_A           78 DLESDSETIHCILGIRKIDESVRIIAE  104 (234)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             cCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence            9987432    2334555666566554

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.91  E-value=0.1  Score=45.42  Aligned_cols=87  Identities=16%  Similarity=0.233  Sum_probs=53.9

Q ss_pred             EEEEecCCChHHHHH-HHHHHHcCCeEE-EEecCHHHHHH-HHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          149 VLLVLGAAGGVGVAA-VQIGKVCGATII-AVARGAEKIKF-LKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~-~~~~~~~g~~v~-~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +|.|+|+ |.+|... +..++..+.+++ +.++++++.+. ++++|...++  .  +    .+++.   ....+|+|+.|
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~--~----~~~~l---~~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T--S----VEELV---GDPDVDAVYVS   69 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S--C----HHHHH---TCTTCCEEEEC
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C--C----HHHHh---cCCCCCEEEEe
Confidence            5889999 9999876 544433778876 55667666654 4566653211  1  1    23332   23469999999


Q ss_pred             CChh-hHHHHHhcccCCCEEEEEe
Q 019196          226 VGGK-LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~~~G~~v~~g  248 (344)
                      ++.. ..+.+..+++. |+-+.+.
T Consensus        70 tp~~~h~~~~~~al~~-Gk~v~~e   92 (332)
T 2glx_A           70 TTNELHREQTLAAIRA-GKHVLCE   92 (332)
T ss_dssp             SCGGGHHHHHHHHHHT-TCEEEEC
T ss_pred             CChhHhHHHHHHHHHC-CCeEEEe
Confidence            9874 44556666666 4545554

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.89  E-value=0.014  Score=48.65  Aligned_cols=105  Identities=15%  Similarity=0.216  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHH----HHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIK----FLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ....++++||-+|+  +.|..+..+++..  +++|++++.+++..+    .++..|...-+.....+..+..........
T Consensus        56 ~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~  133 (242)
T 3r3h_A           56 IRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGG  133 (242)
T ss_dssp             HHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHC
T ss_pred             HhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccC
Confidence            34456789999986  5677888888875  579999999876433    334455421111111222111222111111


Q ss_pred             CCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          216 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...||+||-....    ..++.+.+.|+|+|.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          134 EHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             SSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence            3579999854443    24677889999999998754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=95.89  E-value=0.034  Score=48.55  Aligned_cols=76  Identities=18%  Similarity=0.221  Sum_probs=47.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC----HHHHHHHHhc-CC-cEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----AEKIKFLKSL-GV-DHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~----~~~~~~~~~~-g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      +|||+|++|.+|..+++.+...|++|+++++.    .+..+.++++ +. ...+..+-.+. +.+.+..+.   .++|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~---~~~D~v   77 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE-ALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH-HHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCH-HHHHHHhhc---cCCCEE
Confidence            68999999999999999888889999988643    2223333332 21 12333322221 223333322   369999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      |++++.
T Consensus        78 ih~A~~   83 (338)
T 1udb_A           78 IHFAGL   83 (338)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999873

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.88  E-value=0.053  Score=45.40  Aligned_cols=94  Identities=17%  Similarity=0.108  Sum_probs=61.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCC---------------------c-EEEeCCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV---------------------D-HVVDLSN  200 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~---------------------~-~v~~~~~  200 (344)
                      ..++.+||..|+  |.|..+..+++. |++|++++.+++-.+.+++ .+.                     . .....+-
T Consensus        66 ~~~~~~vLD~GC--G~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~  142 (252)
T 2gb4_A           66 GQSGLRVFFPLC--GKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI  142 (252)
T ss_dssp             TCCSCEEEETTC--TTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred             CCCCCeEEEeCC--CCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence            467889999987  557777777764 9999999999988887753 321                     1 1111111


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCC-----h----hhHHHHHhcccCCCEEEEEe
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .+.   .     ......||+|++...     .    ..+..+.+.|+|+|+++.+.
T Consensus       143 ~~l---~-----~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          143 FDL---P-----RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             TTG---G-----GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccC---C-----cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            111   0     011257999997532     1    13566789999999987554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.88  E-value=0.027  Score=48.71  Aligned_cols=35  Identities=17%  Similarity=0.136  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~  181 (344)
                      +++|||+||+|.+|..++..+...|++|+++++ +.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence            468999999999999999988888999999887 54

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.87  E-value=0.25  Score=43.47  Aligned_cols=89  Identities=16%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             CEEEEecCCChHHH-HHHHHHHHc-CCeEE-EEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          148 QVLLVLGAAGGVGV-AAVQIGKVC-GATII-AVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       148 ~~vlI~g~~g~~G~-~~~~~~~~~-g~~v~-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      -+|.|+|. |.+|. ..+..++.. +++++ +.++++++.+.+ +++|....-     +    .++++   ....+|+|+
T Consensus        28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~-----~----~~~ll---~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE-----G----YPALL---ERDDVDAVY   94 (350)
T ss_dssp             EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEE-----S----HHHHH---TCTTCSEEE
T ss_pred             eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcC-----C----HHHHh---cCCCCCEEE
Confidence            37999999 99997 556655555 77876 446666665544 567765431     2    33333   235799999


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEecc
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .|+... ..+.+..+++.+ +-|++..+
T Consensus        95 i~tp~~~h~~~~~~al~aG-k~Vl~EKP  121 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAG-KHVLAEKP  121 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred             ECCCcHHHHHHHHHHHHCC-CcEEEeCC
Confidence            999874 455566666554 44556543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.87  E-value=0.045  Score=49.31  Aligned_cols=95  Identities=17%  Similarity=0.168  Sum_probs=60.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC---CeEEEEecCHHHHHHH-HhcCC-----cEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCG---ATIIAVARGAEKIKFL-KSLGV-----DHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g---~~v~~~~~~~~~~~~~-~~~g~-----~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      .+|+|+|+ |++|..+++.+...|   .+|++.+++.++.+.+ ++++.     -..+..+-.+ .+.+.++.+..   +
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-~~~l~~~l~~~---~   76 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-IEELVALINEV---K   76 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-HHHHHHHHHHH---C
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-HHHHHHHHHhh---C
Confidence            37999999 999999999888777   4899999998877655 33321     1222222222 12244444332   5


Q ss_pred             ccEEEeCCChhh-HHHHHhcccCCCEEEEE
Q 019196          219 VDVLYDPVGGKL-TKESLKLLNWGAQILVI  247 (344)
Q Consensus       219 ~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (344)
                      +|+|++|++... ...+..+++.+-.++.+
T Consensus        77 ~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           77 PQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            899999998632 23344555666666654

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.86  E-value=0.018  Score=49.25  Aligned_cols=83  Identities=12%  Similarity=-0.011  Sum_probs=56.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|+ |.+|...+..+.. |.+|++.++++++.+.+.+.|... .+  ..+.            -..+|+||.|+..
T Consensus         3 ~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~-~~--~~~~------------~~~~D~vi~~v~~   65 (289)
T 2cvz_A            3 KVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSE-AV--PLER------------VAEARVIFTCLPT   65 (289)
T ss_dssp             CEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCE-EC--CGGG------------GGGCSEEEECCSS
T ss_pred             eEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcc-cC--HHHH------------HhCCCEEEEeCCC
Confidence            5889998 9999998888877 999999999988877776655432 11  1111            0257999999886


Q ss_pred             hh-HHHH----HhcccCCCEEEEEe
Q 019196          229 KL-TKES----LKLLNWGAQILVIG  248 (344)
Q Consensus       229 ~~-~~~~----~~~l~~~G~~v~~g  248 (344)
                      +. ....    ...++++..++.++
T Consensus        66 ~~~~~~v~~~l~~~l~~~~~vv~~s   90 (289)
T 2cvz_A           66 TREVYEVAEALYPYLREGTYWVDAT   90 (289)
T ss_dssp             HHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred             hHHHHHHHHHHHhhCCCCCEEEECC
Confidence            42 4433    34566666666553

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.85  E-value=0.05  Score=49.73  Aligned_cols=93  Identities=13%  Similarity=0.128  Sum_probs=56.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++|+|+|+ |++|..++..+...|++|++.+++.++.+.+. +++....+..+-.+.    ..+....  .++|+|++|
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~----~~l~~~l--~~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD----AALDAEV--AKHDLVISL   75 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH----HHHHHHH--TTSSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH----HHHHHHH--cCCcEEEEC
Confidence            568999985 99999999988888999999999887665443 333222222222221    2222222  269999999


Q ss_pred             CChhhH-HHHHhcccCCCEEEE
Q 019196          226 VGGKLT-KESLKLLNWGAQILV  246 (344)
Q Consensus       226 ~g~~~~-~~~~~~l~~~G~~v~  246 (344)
                      ++.... .....+++++-.++.
T Consensus        76 a~~~~~~~i~~a~l~~g~~vvd   97 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQKKHVVT   97 (450)
T ss_dssp             CC--CHHHHHHHHHHHTCEEEE
T ss_pred             CccccchHHHHHHHhCCCeEEE
Confidence            986322 223344455445544

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.84  E-value=0.071  Score=44.86  Aligned_cols=94  Identities=15%  Similarity=0.210  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~---g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ++++.+||=+|+  |.|..+..+++..   |++|++++.+++-++.+++    .+..   ..+..+-.++          
T Consensus        68 ~~~~~~vLDlGc--GtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~----------  135 (261)
T 4gek_A           68 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI----------  135 (261)
T ss_dssp             CCTTCEEEEETC--TTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----------
T ss_pred             CCCCCEEEEEeC--CCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----------
Confidence            789999999997  5677888888764   6799999999987777653    3322   1222221111          


Q ss_pred             hcCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEecc
Q 019196          214 RKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       214 ~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                       ....+|+|+-+..-         ..+..+.+.|+|||.++.....
T Consensus       136 -~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~  180 (261)
T 4gek_A          136 -AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF  180 (261)
T ss_dssp             -CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             -cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence             23468888754321         2357788999999999886543

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.84  E-value=0.2  Score=44.26  Aligned_cols=108  Identities=17%  Similarity=0.171  Sum_probs=68.6

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC----HHH---------HHHHHhcCCcEE
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG----AEK---------IKFLKSLGVDHV  195 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~----~~~---------~~~~~~~g~~~v  195 (344)
                      .++.-+.++.....--++.+|+|+|+ |..|..+++++..+|+ +|++++++    .+|         ..++++...   
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GA-GaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---  250 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---  250 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---
Confidence            44444445532332225679999999 9999999999999999 89999987    544         333343221   


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEEeccC
Q 019196          196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  251 (344)
                        ......   +.+..     .++|++|-+++...+ ++.++.|+++..+..+..+.
T Consensus       251 --~~~~~~---L~eav-----~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          251 --ERLSGD---LETAL-----EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             --TCCCSC---HHHHH-----TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             --cCchhh---HHHHH-----ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence              111111   33332     357999998874433 66778888877666655544

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.84  E-value=0.017  Score=50.52  Aligned_cols=85  Identities=21%  Similarity=0.254  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|...++.++..|.+|++.+++.++ +.++++|...    .  +    ..++.     ...|+|+.|
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~--~----l~e~l-----~~aDiVil~  207 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY----M--D----IDELL-----EKSDIVILA  207 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE----C--C----HHHHH-----HHCSEEEEC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee----c--C----HHHHH-----hhCCEEEEc
Confidence            4679999999 999999999999999999999988765 5555555321    1  1    22222     146788887


Q ss_pred             CChh-----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGGK-----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~~-----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++..     .+ ...+..++++ .++.++
T Consensus       208 vp~~~~t~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          208 LPLTRDTYHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             CCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred             CCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence            7642     22 3456677777 665554

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.84  E-value=0.016  Score=51.12  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=63.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+++|.|+|. |.+|...++.++ ..|.+|++.+++.++.+.++++|...+     .+    ..++.     ...|+|+.
T Consensus       162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell-----~~aDvVil  226 (348)
T 2w2k_A          162 RGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DS----LEELA-----RRSDCVSV  226 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SS----HHHHH-----HHCSEEEE
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CC----HHHHh-----ccCCEEEE
Confidence            4779999999 999999999999 999999999988766666666665321     11    23332     24799999


Q ss_pred             CCChh-----hH-HHHHhcccCCCEEEEEe
Q 019196          225 PVGGK-----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~-----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++...     .+ ...+..++++..++.++
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred             eCCCChHHHHHhhHHHHhcCCCCCEEEECC
Confidence            98742     22 45677888888777654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.83  E-value=0.057  Score=46.59  Aligned_cols=95  Identities=12%  Similarity=0.117  Sum_probs=61.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCC-----CCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-----ESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|+|+ |.+|...+..+...|.+|++.++++++.+.+++.|.... ....     ..... ..+...  .-..+|+||
T Consensus         5 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~-~~~~~~--~~~~~d~vi   79 (316)
T 2ew2_A            5 KIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIAD-FNGEEVVANLPIFS-PEEIDH--QNEQVDLII   79 (316)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEE-ETTEEEEECCCEEC-GGGCCT--TSCCCSEEE
T ss_pred             eEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEE-eCCCeeEecceeec-chhhcc--cCCCCCEEE
Confidence            6999999 999999999888889999999999988887776663321 1100     00000 000000  012689999


Q ss_pred             eCCChhhHHH----HHhcccCCCEEEEEe
Q 019196          224 DPVGGKLTKE----SLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~~~~~----~~~~l~~~G~~v~~g  248 (344)
                      -|+.......    ....++++..++++.
T Consensus        80 ~~v~~~~~~~v~~~l~~~l~~~~~iv~~~  108 (316)
T 2ew2_A           80 ALTKAQQLDAMFKAIQPMITEKTYVLCLL  108 (316)
T ss_dssp             ECSCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred             EEeccccHHHHHHHHHHhcCCCCEEEEec
Confidence            9999754444    334566666777664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.82  E-value=0.022  Score=48.57  Aligned_cols=37  Identities=19%  Similarity=0.159  Sum_probs=31.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      -++..+|||+|++|.+|..+++.+...|++|++++++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            3466799999999999999999988889999999875

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.82  E-value=0.036  Score=46.71  Aligned_cols=85  Identities=20%  Similarity=0.277  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .+ +++|+|+ |.+|...+..+...|++|++..++.++.+.+ ++++..  +  .  +.    .+     . ..+|+|++
T Consensus       116 ~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~--~~----~~-----~-~~~Divi~  177 (263)
T 2d5c_A          116 KG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--V--PL----EK-----A-REARLLVN  177 (263)
T ss_dssp             CS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--C--CG----GG-----G-GGCSEEEE
T ss_pred             CC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--h--hH----hh-----c-cCCCEEEE
Confidence            45 8999999 9999999999998999999999998875544 556653  1  1  11    11     1 36899999


Q ss_pred             CCChhhHH---H--HHhcccCCCEEEEEe
Q 019196          225 PVGGKLTK---E--SLKLLNWGAQILVIG  248 (344)
Q Consensus       225 ~~g~~~~~---~--~~~~l~~~G~~v~~g  248 (344)
                      |++.....   .  ...+++++..++.++
T Consensus       178 ~tp~~~~~~~~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          178 ATRVGLEDPSASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             CSSTTTTCTTCCSSCGGGSCSSSEEEESC
T ss_pred             ccCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            99865321   1  145677777777654

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.82  E-value=0.071  Score=42.04  Aligned_cols=97  Identities=19%  Similarity=0.190  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc----EEEeCCCCCchhhHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD----HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~----~v~~~~~~~~~~~~~~~~  211 (344)
                      .....+++.+||-.|+  |.|..+..+++. +.++++++.+++..+.+++    .+..    .+...+-.+.        
T Consensus        46 ~~~~~~~~~~vLdiG~--G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--------  114 (194)
T 1dus_A           46 ENVVVDKDDDILDLGC--GYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--------  114 (194)
T ss_dssp             HHCCCCTTCEEEEETC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--------
T ss_pred             HHcccCCCCeEEEeCC--CCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc--------
Confidence            5556778899999987  457777788877 8899999999987777753    2322    2332222211        


Q ss_pred             HHhcCCCccEEEeCCC----h----hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVG----G----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g----~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                        .....||+|+-...    .    ..+..+.+.|+++|.++....
T Consensus       115 --~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          115 --VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             --CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence              11357999987543    1    345677789999999988653

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.81  E-value=0.091  Score=46.29  Aligned_cols=94  Identities=19%  Similarity=0.175  Sum_probs=60.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC-----CC-CchhhHHHHHHHhcCCCccE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS-----NE-SVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~-----~~-~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+++.+...+....     .. .......+..     ..+|+
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~D~   78 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV   78 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH-----hcCCE
Confidence            47999999 9999999988888899999999998888777654311111100     00 0111122221     36899


Q ss_pred             EEeCCChhhHHH----HHhcccCCCEEEEE
Q 019196          222 LYDPVGGKLTKE----SLKLLNWGAQILVI  247 (344)
Q Consensus       222 vid~~g~~~~~~----~~~~l~~~G~~v~~  247 (344)
                      ||.|+.......    ....++++..++..
T Consensus        79 vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           79 ILIVVPAIHHASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             EEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             EEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence            999998754433    33456666656655

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.80  E-value=0.025  Score=49.20  Aligned_cols=75  Identities=12%  Similarity=0.171  Sum_probs=48.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      .+|||+|++|.+|..+++.+...|++|++++++..+..  +.+. .-..+..+-.+. +.+.+..+.   .++|+||+|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~-~~~~~~~~~---~~~d~vih~a   75 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNGDLRDK-AFLRDVFTQ---ENIEAVMHFA   75 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEECCTTCH-HHHHHHHHH---SCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEECCCCCH-HHHHHHHhh---cCCCEEEECC
Confidence            36999999999999999999888999999987643211  1221 112333322221 223333322   3799999998


Q ss_pred             Ch
Q 019196          227 GG  228 (344)
Q Consensus       227 g~  228 (344)
                      +.
T Consensus        76 ~~   77 (330)
T 2c20_A           76 AD   77 (330)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.78  E-value=0.11  Score=42.16  Aligned_cols=96  Identities=17%  Similarity=0.103  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC--cEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ......++.+||-+|+  |.|..+..+++. ++++++++.+++-.+.+++...  ..+...+-.+.          ....
T Consensus        39 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~----------~~~~  105 (220)
T 3hnr_A           39 EDVVNKSFGNVLEFGV--GTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF----------EVPT  105 (220)
T ss_dssp             HHHHHTCCSEEEEECC--TTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC----------CCCS
T ss_pred             HHhhccCCCeEEEeCC--CCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc----------CCCC
Confidence            3334457889999997  457777777776 8899999999988888865421  12222222211          0115


Q ss_pred             CccEEEeCCCh-----h----hHHHHHhcccCCCEEEEEe
Q 019196          218 GVDVLYDPVGG-----K----LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid~~g~-----~----~~~~~~~~l~~~G~~v~~g  248 (344)
                      .||+|+.+..-     +    .+..+.+.|+|+|.++...
T Consensus       106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            79999865432     1    5677889999999998864

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.77  E-value=0.043  Score=50.67  Aligned_cols=39  Identities=21%  Similarity=0.189  Sum_probs=33.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGAEK  183 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~---g~~v~~~~~~~~~  183 (344)
                      ..+++|||+|++|.+|..++..+...   |++|++++++.+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            45789999999999999999777766   8999999987654

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=95.77  E-value=0.048  Score=47.14  Aligned_cols=94  Identities=17%  Similarity=0.166  Sum_probs=59.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|+|+|+ |.+|.+.+..+. .|.+|+++++++++.+.+++.|.... .. .......... . ......+|+||-|+-
T Consensus         3 mkI~IiGa-Ga~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~-~~-~~~~~~~~~~-~-~~~~~~~D~vilavK   76 (307)
T 3ego_A            3 LKIGIIGG-GSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLY-KG-GEEFRADCSA-D-TSINSDFDLLVVTVK   76 (307)
T ss_dssp             CEEEEECC-SHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEE-ET-TEEEEECCEE-E-SSCCSCCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEe-cC-CCeecccccc-c-ccccCCCCEEEEEeC
Confidence            47999999 999999988888 88999999999888877777664322 11 0000000000 0 001246899999988


Q ss_pred             hhhHHHHHhcccC--CCEEEEE
Q 019196          228 GKLTKESLKLLNW--GAQILVI  247 (344)
Q Consensus       228 ~~~~~~~~~~l~~--~G~~v~~  247 (344)
                      ...+..++..+++  .+.++++
T Consensus        77 ~~~~~~~l~~l~~~~~~~ivs~   98 (307)
T 3ego_A           77 QHQLQSVFSSLERIGKTNILFL   98 (307)
T ss_dssp             GGGHHHHHHHTTSSCCCEEEEC
T ss_pred             HHHHHHHHHHhhcCCCCeEEEe
Confidence            7666666665553  2344443

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.76  E-value=0.1  Score=43.83  Aligned_cols=97  Identities=13%  Similarity=0.140  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC---cEEEeCCCCCchhhHHHHHHHhc
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .+.++.+||-+|+  |.|..+..+++..+++|++++.+++..+.+++    .|.   ..+...+-.+.   .      ..
T Consensus        43 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~  111 (267)
T 3kkz_A           43 NLTEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL---P------FR  111 (267)
T ss_dssp             CCCTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------CC
T ss_pred             cCCCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC---C------CC
Confidence            4778999999997  46888888888866699999999987776643    332   12222222221   0      12


Q ss_pred             CCCccEEEeCCCh------hhHHHHHhcccCCCEEEEEecc
Q 019196          216 LKGVDVLYDPVGG------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       216 ~~~~d~vid~~g~------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ...||+|+....-      ..+..+.+.|+|+|.++.....
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  152 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECS  152 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence            3579999865432      3467788999999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	344
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	1e-29
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	7e-25
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-20
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	6e-19
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-18
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	6e-18
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-17
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	6e-17
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	7e-17
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-16
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-16
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	3e-16
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	7e-16
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	1e-14
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-14
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	2e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-14
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-14
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-14
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	1e-12
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-12
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-12
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	3e-12
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	6e-12
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	1e-11
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-11
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	4e-11
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	7e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-10
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	6e-10
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-09
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	4e-09
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	6e-09
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-09
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	8e-09
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	2e-08
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	2e-08
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-08
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	9e-08
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	1e-07
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-07
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-06
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	4e-06
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	5e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-05
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-04
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-04
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-04
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-04
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	5e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-04
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.001
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	0.001
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	0.001
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.001
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	0.001
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	0.001
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	0.002
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	0.002
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.002
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	0.002
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	0.002
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.002
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	0.002
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	0.003
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.003
d1xtoa_	304	d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P	0.003
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	0.004
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	0.004
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.004
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	0.004
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	0.004
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	0.004
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	0.004

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score =  110 bits (275), Expect = 1e-29
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 7/183 (3%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQ-VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 182
            A + V   T+++ L H  +L+ G+   +  G    VG  A QIGK+     I+V R   
Sbjct: 6   GATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP 65

Query: 183 KIKFLK----SLGVDHVVDLSNESVIPSVKEF--LKARKLKGVDVLYDPVGGKLTKESLK 236
            +  +      LG   V+     +             +      +  + VGGK +    +
Sbjct: 66  NLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIAR 125

Query: 237 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWA 296
            LN    +L  G  S +   IP ++ + KN+T  G +      +   +   +L +++ W 
Sbjct: 126 KLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWY 185

Query: 297 AKG 299
            +G
Sbjct: 186 EEG 188

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 97.4 bits (241), Expect = 7e-25
 Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
           AA   VA+ T+  +L    +LS G+ +L+  A GGVG+AAV I K+ GA I   A    K
Sbjct: 3   AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
            + L  LGV++V D  +        E L+     GVDV+ + + G+  +  +++L  G +
Sbjct: 63  REMLSRLGVEYVGDSRSVDF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGR 119

Query: 244 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 303
            + +G             AL K+ +   +        +P      L+ +L   A G + +
Sbjct: 120 FIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV 179

Query: 304 H 304
            
Sbjct: 180 L 180

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 84.6 bits (208), Expect = 3e-20
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 4/160 (2%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
              L     T + A V+ A+L  G V  V G  G      +       + II V    +K
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA- 242
               K  G    ++  +      ++E L      GVD  ++ +G      +         
Sbjct: 66  FARAKEFGATECINPQDF--SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW 123

Query: 243 -QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 281
              +V+G A+    +      LV   T  G  +G +K   
Sbjct: 124 GVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVE 163

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 80.8 bits (198), Expect = 6e-19
 Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 3/160 (1%)

Query: 123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 182
               L     T   A V+ A++  G    V G       A +         IIAV    +
Sbjct: 5   TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD 64

Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWG 241
           K +  K  G    V+ ++ S      + L      GVD   + VG       +L+    G
Sbjct: 65  KFEKAKVFGATDFVNPNDHSEPI--SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 122

Query: 242 AQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 281
             + V+   +    V    I L+   T  G  +G +K   
Sbjct: 123 WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKD 162

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 3/162 (1%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
           DL   A    +  T++ A     +  +G+ +++ GA        V    +    +I +A 
Sbjct: 2   DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLL 238
              ++K  + +G D  ++    SV    K  +     +G D + +  G      E  +LL
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 239 NWGAQILVIGFASG--EIPVIPANIALVKNWTVHGLYWGSYK 278
             G    V G A     +P       ++KN T  G++     
Sbjct: 122 RRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTS 163

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.1 bits (191), Expect = 6e-18
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 6/168 (3%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
              +   F T + + V  A+++ G    V G  G      +       A II V    +K
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLNWGA 242
               K +G    V+  +      ++E L      GVD  ++ +G   T   +L       
Sbjct: 66  FAKAKEVGATECVNPQDYK--KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAY 123

Query: 243 -QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLED 287
              +++G       +    + L+   T  G  +G +K     P ++ D
Sbjct: 124 GVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVAD 171

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 77.4 bits (189), Expect = 1e-17
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)

Query: 122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 181
           LA   + +   T++  L+    +  G+ +LV  AAG VG    QI K+ G  ++  A   
Sbjct: 5   LALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD 64

Query: 182 EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWG 241
           EKI +LK +G D   +      + S++E LK     G D  +D VGG+     L  +   
Sbjct: 65  EKIAYLKQIGFDAAFNYKT---VNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDF 121

Query: 242 AQILVIGFA-----SGEIPVIPANIALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLW 295
            +I + G         ++P  P+  +++ K   + G     +   +  V E +LR+L+ W
Sbjct: 122 GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW---QGDVREKALRDLMKW 178

Query: 296 AAKG 299
             +G
Sbjct: 179 VLEG 182

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 75.3 bits (184), Expect = 6e-17
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 6/160 (3%)

Query: 122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG 180
           L +  +   F T + A V+ A+++ G    V G  GGVG +A+   K  GA  II V   
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 181 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES--LKLL 238
            +K      LG    ++  +      + E +  +   GVD   +  G   T  +      
Sbjct: 62  KDKFPKAIELGATECLNPKDYD--KPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK 278
                 +V+G AS    +    + L+   ++ G  +G +K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK 159

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 75.4 bits (184), Expect = 7e-17
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 5/178 (2%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
           AAA  +   T +  L    ++   +  L   AAGGVG+ A Q  K  GA +I     A+K
Sbjct: 6   AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK 65

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
            +     G   V++   E ++  +KE       K V V+YD VG    + SL  L     
Sbjct: 66  AQSALKAGAWQVINYREEDLVERLKEITGG---KKVRVVYDSVGRDTWERSLDCLQRRGL 122

Query: 244 ILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 300
           ++  G +SG +  +   I   K +  V       Y I     L ++  EL    A G+
Sbjct: 123 MVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGV 179

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 73.8 bits (180), Expect = 2e-16
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 20/183 (10%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
            L A A L  A  T++  L    Q   G+ + V+G  GG+G   +++    GA ++A   
Sbjct: 5   QLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT 62

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV-GGKLTKESLKLL 238
              K +  K+LG D VV+        S      A  LK  D + + V       +   LL
Sbjct: 63  SEAKREAAKALGADEVVN--------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLL 114

Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 298
                + ++G  +           ++K   + G   G              +E+L + A+
Sbjct: 115 KRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP---------ETQEMLDFCAE 165

Query: 299 GLI 301
             I
Sbjct: 166 HGI 168

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 14/179 (7%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE 182
              L     T   A ++  +++     +    AG VG++A+   KVCGA  IIAV     
Sbjct: 6   LGPLGCGIQTGAGACINALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAVDIVES 64

Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD-VLYDPVGGKLTKESLKLLNWG 241
           +++  K LG  HV++   +  + ++KE        GV+  L      ++ K+ +  L   
Sbjct: 65  RLELAKQLGATHVINSKTQDPVAAIKEITD----GGVNFALESTGSPEILKQGVDALGIL 120

Query: 242 AQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 299
            +I V+G            N  L+   T+ G+  GS    +       + EL+    +G
Sbjct: 121 GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKK------FIPELVRLYQQG 173

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.5 bits (179), Expect = 3e-16
 Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 17/189 (8%)

Query: 122 LAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
               A+ +   TS + +  +  +S+G  Q ++V GAAG  G  A QIG + G + +    
Sbjct: 4   YFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC 63

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 239
           G ++      L  +   D +      +V E L+     GVDV +D VGG ++   +  +N
Sbjct: 64  GTQEKCL--FLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 240 WGAQILVIGFASGEIPVIPAN---------IALVKNWTVHGLYWGSYKIHRPHVLEDSLR 290
             + I++ G  S     +P           I   +N T       +Y        E  + 
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNY----KDKFEPGIL 177

Query: 291 ELLLWAAKG 299
           +L  W  +G
Sbjct: 178 QLSQWFKEG 186

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 71.8 bits (175), Expect = 7e-16
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 23/163 (14%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  K      +               +  L     V VRV  +S+NY + L  +  
Sbjct: 4   FQAFVVNKTETEFTAGVQTI---------SMDDLPEGD-VLVRVHYSSVNYKDGLASIPD 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG------FAALGSFAQFIVAD--- 111
            +     PFVPG D +G V +       F+ GD V            G ++++       
Sbjct: 54  GKIVKTYPFVPGIDLAGVVVSSQH--PRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW 111

Query: 112 QFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 154
             P+PKG +   A  + +A     +  + R +L  G+ ++ L 
Sbjct: 112 LVPLPKGLER-IAQEISLAELPQALKRILRGEL-RGRTVVRLA 152

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 68.9 bits (167), Expect = 1e-14
 Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 11/177 (6%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
           AAA PV+F T+++AL  RAQ   G+ +LV  AAG +G AAVQ+ +  G  ++A A   EK
Sbjct: 6   AAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK 64

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
           +    +LG +     +            +  K  G   L   V GK  +ESL LL  G +
Sbjct: 65  LALPLALGAEEAATYAEVP---------ERAKAWGGLDLVLEVRGKEVEESLGLLAHGGR 115

Query: 244 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL 300
           ++ IG A GE+  IP    + +N  V G +     +    ++E++L  LL    + L
Sbjct: 116 LVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGREL 171

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 68.8 bits (167), Expect = 1e-14
 Identities = 32/140 (22%), Positives = 48/140 (34%), Gaps = 5/140 (3%)

Query: 132 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG 191
             S   L           +LV GA GGVG  AV +    G  ++A     E   +LK LG
Sbjct: 9   ALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLG 68

Query: 192 VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 251
              V+   +                +      DPVGGK     L  + +G  + V G   
Sbjct: 69  ASEVISREDVYDGTLKALS-----KQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTG 123

Query: 252 GEIPVIPANIALVKNWTVHG 271
           G          +++  ++ G
Sbjct: 124 GGEVPATVYPFILRGVSLLG 143

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 68.3 bits (166), Expect = 2e-14
 Identities = 35/151 (23%), Positives = 59/151 (39%), Gaps = 8/151 (5%)

Query: 124 AAALPVAFGTSHV---ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG 180
           A A+  A  T+ +    L           +LV GA GGVG  AV +    G T+ A    
Sbjct: 6   AMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK 65

Query: 181 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNW 240
           A +  +L+ LG   V+          + E ++    +      DPVGG+     L  + +
Sbjct: 66  AAEHDYLRVLGAKEVLAR-----EDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRY 120

Query: 241 GAQILVIGFASGEIPVIPANIALVKNWTVHG 271
           G  + V G   G       +  +++  ++ G
Sbjct: 121 GGAVAVSGLTGGAEVPTTVHPFILRGVSLLG 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 68.0 bits (165), Expect = 3e-14
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 17/182 (9%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA 178
            L+  A L  A  T++ A+   A+ L  G  + ++G  G   +A   +  +  AT+IA+ 
Sbjct: 5   KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALD 64

Query: 179 RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKL 237
              EK+K  + LG DHVVD   +     VK+ ++  + +GV+V  D VG + T + +  L
Sbjct: 65  VKEEKLKLAERLGADHVVDARRD----PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYL 120

Query: 238 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 297
           L    +++++G+  G     P    +    +  G   G+Y           L EL+  A 
Sbjct: 121 LGRMGRLIIVGY--GGELRFPTIRVISSEVSFEGSLVGNYV---------ELHELVTLAL 169

Query: 298 KG 299
           +G
Sbjct: 170 QG 171

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 3e-14
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 6/168 (3%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAE 182
              +   F T + A V   ++  G   +V G  GGVG++ +   K  GA+ II +    +
Sbjct: 7   VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKD 65

Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 242
           K +   ++G    +    +S  P  +   +                +   ++L   +   
Sbjct: 66  KFEKAMAVGATECIS-PKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNY 124

Query: 243 QILV-IGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLED 287
              V +G       +    + L    T  G  +G  K     P ++ +
Sbjct: 125 GTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTE 172

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.4 bits (161), Expect = 3e-14
 Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 30/157 (19%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILG 59
           M+A V ++LG P            L   + P P+      V +RV+A  LN+A++L  LG
Sbjct: 1   MKAWVLKRLGGP------------LELVDLPEPEAEEGE-VVLRVEAVGLNFADHLMRLG 47

Query: 60  KYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVP 116
            Y  +   PF+PG +                 G         G  A+ +   +    P+P
Sbjct: 48  AYLTRLHPPFIPGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLP 96

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 153
           +G  ++           +  AL+ R     G+V++ L
Sbjct: 97  EGRPVVGPVFPFAEAEAAFRALLDRGHT--GKVVVRL 131

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (152), Expect = 1e-12
 Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 5/174 (2%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
           D    AA+ + + T++ AL+H A + +G+ +LV GA+GGVG+AA QI +  G  I+  A 
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 239
             E  K +   G   V +    + I  +K++      KG+D++ + +      + L LL+
Sbjct: 62  TEEGQKIVLQNGAHEVFNHREVNYIDKIKKY---VGEKGIDIIIEMLANVNLSKDLSLLS 118

Query: 240 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL 293
            G +++V+G + G I + P +  + K  ++ G+   S           +L+  +
Sbjct: 119 HGGRVIVVG-SRGTIEINPRDT-MAKESSIIGVTLFSSTKEEFQQYAAALQAGM 170

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 2e-12
 Identities = 29/204 (14%), Positives = 62/204 (30%), Gaps = 64/204 (31%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  + G P +SI +            +     +  VR+++ AT++ + +   + G 
Sbjct: 7   CKAAVAWEAGKP-LSIEEI----------EVAPP-KAHEVRIKIIATAVCHTDAYTLSGA 54

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
             E    P + G   +G V++VG  V+  K GDTV                         
Sbjct: 55  DPEGCF-PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKI 113

Query: 97  ------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
                                    +    +F+++ V        +     +       +
Sbjct: 114 RVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNL 173

Query: 130 AFGTSHVALVHRAQLSSGQVLLVL 153
           +F   + A        S + ++ +
Sbjct: 174 SFDEINKAFELMHSGKSIRTVVKI 197

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 24/159 (15%), Positives = 44/159 (27%), Gaps = 35/159 (22%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPP--LPFVPGSDYSGTVDAVGPNVS 87
           PIP+      V +++    +  ++                P V G + SGTV  VG NV 
Sbjct: 19  PIPEP-KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK 77

Query: 88  NFKVGDTVCGFAALG-------------------------------SFAQFIVADQFPVP 116
           + K GD V     +                                 +          +P
Sbjct: 78  HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLP 137

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA 155
             C++            +  A    A+  +   + V+ +
Sbjct: 138 DNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (148), Expect = 3e-12
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 13/157 (8%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   + G P V        + L     +P       V ++V A  +N        G 
Sbjct: 3   MRAVRVFEFGGPEV--------LKLRSDIAVPIP-KDHQVLIKVHACGVNPVETYIRSGT 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD-TVCGFAALGSFAQFIVADQFPVPKGC 119
           Y  KP LP+ PGSD +G ++AVG N S FK GD         G +A++ +A    V K  
Sbjct: 54  YSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLP 113

Query: 120 DLL---AAAALPVAFGTSHVALVHRAQLSSGQVLLVL 153
           + L     +  P+         +     ++G+++L+L
Sbjct: 114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.2 bits (147), Expect = 6e-12
 Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 16/181 (8%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
           +    A +  A  T +  L  +     GQ + +    GG+G  AVQ  +  G  + A+  
Sbjct: 2   EFAEIAPILCAGVTVYKGL-KQTNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAIDI 59

Query: 180 GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLN 239
              K++  + LG    V+   E  + +++            VL   V      +++ +  
Sbjct: 60  DDAKLELARKLGASLTVNARQEDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMAR 115

Query: 240 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG 299
            G  I ++G   G+ P    ++ ++K   + G   G+            L+E L +A +G
Sbjct: 116 RGGTIALVGLPPGDFPTPIFDV-VLKGLHIAGSIVGTRA---------DLQEALDFAGEG 165

Query: 300 L 300
           L
Sbjct: 166 L 166

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 45/184 (24%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V    G P + I +            +P       V V+++A+ + + +     G 
Sbjct: 6   MKAAVVHAYGAP-LRIEEV----------KVPLP-GPGQVLVKIEASGVCHTDLHAAEGD 53

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS----------------- 103
           +  KPPLPF+PG +  G V AVG  V+  K GD V       +                 
Sbjct: 54  WPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES 113

Query: 104 -----------FAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
                      +A++++AD      +PK                    +  RA    G++
Sbjct: 114 QQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM--RAGQIEGRI 171

Query: 150 LLVL 153
           +L +
Sbjct: 172 VLEM 175

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 59.9 bits (144), Expect = 1e-11
 Identities = 26/168 (15%), Positives = 42/168 (25%), Gaps = 18/168 (10%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +AL   K  D            V  KT     L     V ++V  + +NY + L     
Sbjct: 4   FQALQAEKNADDVS---------VHVKTISTEDLPKDG-VLIKVAYSGINYKDGLAGKAG 53

Query: 61  YQEKPPLPFVP-----GSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ--F 113
                  P +      G+  S                  +      G      V      
Sbjct: 54  GNIVREYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLV 113

Query: 114 PVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGV 161
           P+P+   L  A    +         +      + + +L     G V V
Sbjct: 114 PLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRVIV 160

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 59.1 bits (142), Expect = 4e-11
 Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
              L     T +      A +  G  + V GA      AA     +  A +I       +
Sbjct: 4   LTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG--------------- 228
           +   K+ G +      +  +   +   L       VD   D VG                
Sbjct: 63  LAHAKAQGFEIADLSLDTPLHEQIAALLGEP---EVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 229 -KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVH-GLYWG 275
             +    +++     +I + G    E P      A + + ++  GL W 
Sbjct: 120 ATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 59.2 bits (142), Expect = 4e-11
 Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 64/204 (31%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  +   P + I +            +     +  +R+++ AT + +   L  L +
Sbjct: 9   CKAAVAWEANKP-LVIEEI----------EVDVP-HANEIRIKIIATGVCH-TDLYHLFE 55

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
            + K   P V G + +G V++VGP V+ F+ G+ V                         
Sbjct: 56  GKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKG 115

Query: 97  ------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
                                    F    +F+Q+ V +Q     +     L       +
Sbjct: 116 WANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRM 175

Query: 130 AFGTSHVALVHRAQLSSGQVLLVL 153
              + + A+         + +L L
Sbjct: 176 PLESVNDAIDLMKHGKCIRTVLSL 199

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 58.2 bits (139), Expect = 7e-11
 Identities = 28/178 (15%), Positives = 50/178 (28%), Gaps = 20/178 (11%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A++  + G+P   +  +   I          L     V V+   + +N ++  QI G 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEI------DDDNLAP-NEVIVKTLGSPVNPSDINQIQGV 56

Query: 61  Y---------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVAD 111
           Y                   G++    V  VG NVS+ + GD V          +     
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 112 Q--FPVPKGCDLLAAAALPVAFGTSHVALVH-RAQLSSGQVLLVLGAA-GGVGVAAVQ 165
                +       + A       T   ++            L   G A    G   + 
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 4e-10
 Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 6/154 (3%)

Query: 122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 181
               AL         A   R  ++ G  +LV GA G +G+  + + K  GA  + V   +
Sbjct: 3   FEEGALIEPLSVGIHA-CRRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 182 EKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE-SLKLLN 239
                  K +G D V+   ++     +   ++ +     +V  +  G + + +  +    
Sbjct: 61  ATRLSKAKEIGADLVLQ-ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATR 119

Query: 240 WGAQILVIGFASGEIPVIPANIALVKNWTVHGLY 273
            G  ++++G  S     +P   A ++   + G++
Sbjct: 120 SGGTLVLVGLGSEMTT-VPLLHAAIREVDIKGVF 152

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.4 bits (132), Expect = 6e-10
 Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 16/179 (8%)

Query: 123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 182
            AA L     T +  LV R     G+ + ++G  GG+G     I K  GA    ++R + 
Sbjct: 5   LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSR 62

Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGA 242
           K +    +G DH +    E                 + V    +         K +  G 
Sbjct: 63  KREDAMKMGADHYIATLEEGDWGEKYFDTFDL----IVVCASSLTDIDFNIMPKAMKVGG 118

Query: 243 QILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 301
           +I+ I        +      L K  ++     GS K          L +LL   ++  I
Sbjct: 119 RIVSISIPEQHEMLSLKPYGL-KAVSISYSALGSIK---------ELNQLLKLVSEKDI 167

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 54.6 bits (130), Expect = 1e-09
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 24/187 (12%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M A+   ++G P +S+ +            +P+      V ++V+A  + +++     G+
Sbjct: 1   MRAVRLVEIGKP-LSLQEI----------GVPKP-KGPQVLIKVEAAGVCHSDVHMRQGR 48

Query: 61  Y-------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVAD-- 111
           +            LP   G + +G ++ VG  V  +  GD V      G    +      
Sbjct: 49  FGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGE 108

Query: 112 --QFPVPKGCDLLAAAALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGK 168
                 P+   +    A        H   +++  ++       +        +  ++  K
Sbjct: 109 EHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFK 168

Query: 169 VCGATII 175
             G  ++
Sbjct: 169 AIGRQVL 175

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 50.7 bits (121), Expect = 4e-09
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 120 DLLAAAALPVAFGT---SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 176
           D   A  +  A  T     +AL           ++V GA+GGVG  AV +    G  ++A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 177 VARGAEKIKFLKSLG 191
           V+      ++LKSLG
Sbjct: 62  VSGRESTHEYLKSLG 76

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 52.2 bits (124), Expect = 6e-09
 Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 25/160 (15%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           ++AL+  +    T++                 +L     V V V  +SLNY + L I GK
Sbjct: 1   LQALLLEQQDGKTLASVQTL---------DESRLPEGD-VTVDVHWSSLNYKDALAITGK 50

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV------CGFAALGSFAQFIVADQ-- 112
            +     P +PG D++GTV         F  G  V       G    G  A+        
Sbjct: 51  GKIIRNFPMIPGIDFAGTVRTSEDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW 108

Query: 113 -FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 151
              +P+G      +          +   ++ Q   G+ L+
Sbjct: 109 LVAMPQGQAAKEISLSEAPNFAEAII-NNQIQ---GRTLV 144

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (125), Expect = 8e-09
 Identities = 24/176 (13%), Positives = 52/176 (29%), Gaps = 41/176 (23%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY 75
           I   +      KT+  P+      + ++++A  +  ++     G +     +P V G + 
Sbjct: 12  IQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEI 70

Query: 76  SGTVDAVGPN-VSNFKVGDTVCGFA----------------------------------- 99
            G V  +GP   S  KVG  V   A                                   
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV 130

Query: 100 ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
           + G +A ++   +    P+P+   +            +    + +  +     L+ 
Sbjct: 131 SQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERMEKGDVRYRFTLVG 185

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 52.2 bits (124), Expect = 8e-09
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 13/176 (7%)

Query: 123 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 182
            A  +     T        A +  G  ++V+G      +            II V     
Sbjct: 5   NAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPI 63

Query: 183 KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWG 241
            ++  K  G   +++  N  +   V +    +   GVD +    GG  T  +++K++  G
Sbjct: 64  CVEAAKFYGATDILNYKNGHIEDQVMKLTNGK---GVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 242 AQILVIGFASGEIPV-IPAN--IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLL 294
             I  I +      + IP       + + T+ G      ++       + LR++++
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRA-----ERLRDMVV 171

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 51.3 bits (121), Expect = 2e-08
 Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 14/181 (7%)

Query: 120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 179
           + + AA L  +  T++ A+  +A L   + LLV+GA GG+G  AVQI K      I    
Sbjct: 2   NAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 180 GAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 238
             E+     K  G D+V++ S +  +  ++   +++ +  V         K      K L
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVI--DLNNSEKTLSVYPKAL 118

Query: 239 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAK 298
               + +++G    ++      I  +      G   G+               ++  A  
Sbjct: 119 AKQGKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGNQS---------DFLGIMRLAEA 168

Query: 299 G 299
           G
Sbjct: 169 G 169

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 51.3 bits (121), Expect = 2e-08
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 16/178 (8%)

Query: 124 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 183
           AA +  A  T++ AL        G+ + +    GG+G  AVQ  K  G  ++AV  G EK
Sbjct: 6   AAPIFCAGVTTYKAL-KVTGAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAVDIGDEK 63

Query: 184 IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQ 243
           ++  K LG D VV+           +F+K +       +   V     + +   +  G  
Sbjct: 64  LELAKELGADLVVNPLK----EDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGA 119

Query: 244 ILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 301
            +++G    E+P IP    ++    + G   G+ K          L+E L +AA+G +
Sbjct: 120 CVLVGLPPEEMP-IPIFDTVLNGIKIIGSIVGTRK---------DLQEALQFAAEGKV 167

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 50.7 bits (120), Expect = 4e-08
 Identities = 24/213 (11%), Positives = 52/213 (24%), Gaps = 54/213 (25%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
              +V    G   V    +     +         +    V ++V +T++  ++   + G+
Sbjct: 2   NRGVVYLGSGKVEV---QKIDYPKMQDPRGKKIEHG---VILKVVSTNICGSDQHMVRGR 55

Query: 61  YQEKPPLPFVPG------------------------------------SDYSGTVDAVGP 84
              +  L                                           ++G    V P
Sbjct: 56  TTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNP 115

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQ-----FPVPKGCDLLAAAALPVAFGTSHVALV 139
             +    G    G    G  A++++          +P     +    +    G   ++L 
Sbjct: 116 ARAGGAYGYVDMGDWTGG-QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL- 173

Query: 140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 172
             A    G+       AG      +   K   A
Sbjct: 174 DDAPRGYGEF-----DAGVPKKFVIDPHKTFSA 201

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 49.2 bits (116), Expect = 9e-08
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 47/185 (25%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           M+A V  +  +P + I +             P + S   V VR+KA  + + +     G 
Sbjct: 1   MKAAVVEQFKEP-LKIKEV----------EKPTI-SYGEVLVRIKACGVCHTDLHAAHGD 48

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG----------------------- 97
           +  KP LP +PG +  G V+ VGP V++ KVGD V                         
Sbjct: 49  WPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH 108

Query: 98  -----FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQV 149
                ++  G +A++  A       +P    +       +         + + Q+ +G+V
Sbjct: 109 QKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEV---FDRMLKGQI-NGRV 164

Query: 150 LLVLG 154
           +L L 
Sbjct: 165 VLTLE 169

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 21/145 (14%), Positives = 41/145 (28%), Gaps = 8/145 (5%)

Query: 14  VSIHDEKSPIVLSKTE-PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPG 72
           +  H    P VL   E       +   ++V  KA  +N+ +     G Y        +  
Sbjct: 4   IEFHKHGGPEVLQAVEFTPADP-AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGT 62

Query: 73  SDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-----FPVPKGCDLLAAAAL 127
                                 V   +ALG+++             P     D+      
Sbjct: 63  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKY 122

Query: 128 PVAFGTSHVALVHRAQLSSGQVLLV 152
           P+        ++  ++ + G  LL+
Sbjct: 123 PLKDAQRAHEIL-ESRATQGSSLLI 146

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 48.8 bits (115), Expect = 1e-07
 Identities = 38/205 (18%), Positives = 61/205 (29%), Gaps = 41/205 (20%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           + A V    G     +              I Q      V V+V AT + + + +     
Sbjct: 4   IIAAVTPCKGAD-FELQAL----------KIRQP-QGDEVLVKVVATGMCHTDLIVR--D 49

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV--------------------CGFAA 100
            +   PLP V G + SG ++A+GPNV+  +VGD V                    C    
Sbjct: 50  QKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFF 109

Query: 101 LGSFAQFIVADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS------SGQVLLVLG 154
             +F+         +      +           +  AL                 L+   
Sbjct: 110 GRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFY 169

Query: 155 AAGGVGVAAVQIGKVCGAT-IIAVA 178
           A   +  AA+   K      II +A
Sbjct: 170 AFDEINQAAIDSRKGITLKPIIKIA 194

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 37/156 (23%)

Query: 30  PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPL--PFVPGSDYSGTVDAVGPNVS 87
           PIP+      V +R+ +  +  ++             +  P V G + SGTV+ VG +V 
Sbjct: 25  PIPEP-GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK 83

Query: 88  NFKVGDTVC----------------------------GFAALGSFAQFIVADQ---FPVP 116
           + K GD V                                  G+  +F   +    + +P
Sbjct: 84  HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLP 143

Query: 117 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
                L     P+      +      +   G  +++
Sbjct: 144 DNVKPLVTHRFPLEKA---LEAFETFKKGLGLKIML 176

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 44.3 bits (103), Expect = 4e-06
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 35/169 (20%)

Query: 16  IHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGS 73
           +H+   P+ + +    P+L     V VR+    + + +   + G + E  +P LP+  G 
Sbjct: 5   LHEYNKPLRI-EDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGH 63

Query: 74  DYSGTVDAVGPNVSNFKVGDTVC---------------------------GFAALGSFAQ 106
           +  G ++ V   V   + GD V                            G    G FA+
Sbjct: 64  ENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAE 123

Query: 107 FIV---ADQFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 152
           F+         +PK   +                L  + ++  G+ +L+
Sbjct: 124 FMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 44.5 bits (104), Expect = 5e-06
 Identities = 36/210 (17%), Positives = 67/210 (31%), Gaps = 72/210 (34%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A +  K G P + I +            +     +  VR++V AT +   +       
Sbjct: 9   CKAAIAWKTGSP-LCIEEI----------EVSPP-KACEVRIQVIATCVCPTDINAT--D 54

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGD--------------------------- 93
            ++K   P V G + +G V++VGP V+NFK GD                           
Sbjct: 55  PKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKL 114

Query: 94  -------------------------TVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAA 125
                                    ++  F  + SF+Q+ V  +     V    DL    
Sbjct: 115 RNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV 174

Query: 126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGA 155
              + F + + A+     +  G+ +  +  
Sbjct: 175 THALPFESINDAI---DLMKEGKSIRTILT 201

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVI 204
           +G+ +LV G A G+G A  Q     GA +       E  +  +++G     VDL +E   
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDER-- 61

Query: 205 PSVKEFLKA--RKLKGVDVL 222
                F++     L  VDVL
Sbjct: 62  -ERVRFVEEAAYALGRVDVL 80

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR----GAEKIKFLKSLGVDHVVDLSNE 201
           SG+ +LV GAA G+G AA+ +    GA+++AV R     AE +  L++  +  V D+S+ 
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDP 63

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVG 227
             + +V           +  +    G
Sbjct: 64  KAVEAVFAEALEE-FGRLHGVAHFAG 88

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVD---HVVDL 198
            G+  ++ GA  G+G          GA+++     A+     +  ++ LG        D+
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI 69

Query: 199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
           ++E  + ++ +F  + KL  VD+L +  GG
Sbjct: 70  TSEQELSALADFAIS-KLGKVDILVNNAGG 98

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDH---VVDL 198
            G   LV G + G+G A V+     GA +   +R  ++    ++  +  G++    V DL
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL 64

Query: 199 SNESVIPSVKEFLKARKLKGVDVL 222
            + +    + + +       +++L
Sbjct: 65  LSRTERDKLMQTVAHVFDGKLNIL 88

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVV-DLSNESV 203
             + +L+ GAA G+G A +++    GA ++A       ++   +++G   VV D+++ + 
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPAS 63

Query: 204 IPSVKEFLKARKLKGVDVL 222
           +        A  L  +D +
Sbjct: 64  VERGFAEALA-HLGRLDGV 81

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLKSLGVD---HVVD 197
            G+V LV G + G+G    Q     G +++  +R  E+      K  +  GV+      D
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD 63

Query: 198 LSNESVIPSVKEFLKARKLKGVDVL 222
           +SN   +  + E +K  K   +D +
Sbjct: 64  VSNYEEVKKLLEAVKE-KFGKLDTV 87

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDLS 199
            +V LV GA  G+G+   +     G  +   ARG E +    K L+  GV+      D+ 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 200 NESVIPSVKEFLKARKLKGVDVLYDPVG 227
           +   I ++   +  R    VDVL +  G
Sbjct: 62  SVPEIEALVAAVVER-YGPVDVLVNNAG 88

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKE 209
           +V       G+ +       G T+       ++   L++    +  +   +E       E
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQ---EPAE 60

Query: 210 FLKA--RKLKGVDVL 222
            ++A       VDVL
Sbjct: 61  LIEAVTSAYGQVDVL 75

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVD---HVVDL 198
             + +LV G   G+G A V+     GA I   AR   +    +   +  G      V D 
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA 66

Query: 199 SNESVIPSVKEFLKARKLKGVDVL 222
           S       + + + +     +D+L
Sbjct: 67  SLRPEREKLMQTVSSMFGGKLDIL 90

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 38.2 bits (88), Expect = 9e-04
 Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 13/150 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----IKFLKSLGVDHV---VD 197
            G+V+++ G++ G+G +         A ++   R  E      ++ +K +G + +    D
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD 65

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLY--DPVGGKLTKESLKLLNWGAQIL--VIGFASGE 253
           ++ ES + ++ +     +   +DV+     +   ++   + L +W   I   + G   G 
Sbjct: 66  VTVESDVINLVQSAIK-EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 254 IPVIPANIALVKNWTVHGLYWGSYKIHRPH 283
              I   +      TV  +     KI  P 
Sbjct: 125 REAIKYFVENDIKGTVINMSSVHEKIPWPL 154

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD---HVVDLSNE 201
           SG+ +++ G A G+G  A +     GA ++      E+     + LG       +D++ E
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE 63

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVG 227
                V  + +      VD L +  G
Sbjct: 64  EDWQRVVAYAREE-FGSVDGLVNNAG 88

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHV-VDLSNES 202
           SG   LV GA  G+G   V+     GA ++AV R    +  L     G++ V VDL +  
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD 63

Query: 203 VIPSVKEFLKARKLKGVDVL 222
              + ++ L    +  VD+L
Sbjct: 64  ---ATEKALG--GIGPVDLL 78

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHV-VDLSNES 202
           +G+ +LV GA  G+G   VQ     GA ++AV+R    +  L     G++ V VDL +  
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE 65

Query: 203 VIPSVKEFLKARKLKGVDVLYDPVG 227
              + +  L    +  VD+L +   
Sbjct: 66  ---ATERALG--SVGPVDLLVNNAA 85

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 10/91 (10%)

Query: 147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD-----HVVD 197
            ++ LV GA+GG+G A  +     G  ++  AR    I       KS G       +  D
Sbjct: 10  DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD 69

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
           LSNE  I S+   ++++   GVD+  +  G 
Sbjct: 70  LSNEEDILSMFSAIRSQ-HSGVDICINNAGL 99

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV---VDLSNE 201
            G+V LV G A GVG+  V++    GA +          + L   LG   +    D+S+E
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSE 64

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVG 227
           +    V   ++ R L  ++VL +  G
Sbjct: 65  ADWTLVMAAVQRR-LGTLNVLVNNAG 89

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 68/205 (33%)

Query: 1   MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
            +A V  +   P  SI +            +     +  VR+++ AT +  ++   + G 
Sbjct: 9   CKAAVLWEEKKP-FSIEEV----------EVAPP-KAHEVRIKMVATGICRSDDHVVSGT 56

Query: 61  YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVC------------------------ 96
                PLP + G + +G V+++G  V+  + GD V                         
Sbjct: 57  LV--TPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKN 114

Query: 97  ------------------------GFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV 129
                                    F    +F+Q+ V D+     +     L       +
Sbjct: 115 DLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVL 174

Query: 130 AFGTSHVALVHRAQLSSGQVLLVLG 154
            F            L SG+ +  + 
Sbjct: 175 PFEK---INEGFDLLRSGESIRTIL 196

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK----IKFLKSLGVDHVVDLSNE 201
           +G+V LV G A G+G + V+     GA ++      E+       L        +D++  
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQP 64

Query: 202 SVIPSVKEFLKARKLKGVDVL 222
           +   +  +        G+ VL
Sbjct: 65  AQWKAAVDTAVTA-FGGLHVL 84

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDL 198
           +G+++L+ GA  G+G           + ++        +       K LG      VVD 
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC 65

Query: 199 SNESVIPSVKEFLKARKLKGVDVL 222
           SN   I S  + +KA  +  V +L
Sbjct: 66  SNREDIYSSAKKVKAE-IGDVSIL 88

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.8 bits (84), Expect = 0.002
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGAT--IIAVARGAEKIKFLKSLGVDHV----VDLS 199
           S   ++V GA  G+G+  VQ          IIA AR  EK   LKS+    V    + ++
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT 61

Query: 200 NESVIPSVKEFLKAR-KLKGVDVLYDPVGG 228
            +  + +    +       G+ +L +  G 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGV 91

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 16/138 (11%), Positives = 31/138 (22%), Gaps = 11/138 (7%)

Query: 27  KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY--SGTVDAVGP 84
           +   +    +   V+VR    S++     ++          P+         G       
Sbjct: 28  EEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGIVEES 87

Query: 85  NVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFG----TSHVA 137
                  GD V  F     +    + D      V             VA G         
Sbjct: 88  KHQKLAKGDFVTSF--YWPWQTKAILDGNGLEKVDPQLVDGLKVKETVAKGLENMGVAFQ 145

Query: 138 LVHRAQLSSGQVLLVLGA 155
            +        Q++ +   
Sbjct: 146 SMMTGGNVGKQIVCISED 163

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 1  MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK 60
           +A V  +   P +S+              +     +  VR+++ A+ +  ++   +  K
Sbjct: 9  CKAAVAWEPHKP-LSLETI----------TVAPP-KAHEVRIKILASGICGSDSSVL--K 54

Query: 61 YQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF 98
                 P + G +  G V+++G  V+  K GD V   
Sbjct: 55 EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPL 92

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSLGVD---HVVDLSNE 201
            G+  L+ G+A G+G A  +     GA +       E  +     +G       +D++++
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQ 63

Query: 202 SVIPSVKEFLKARKLKGVDV 221
           + I      L   +   +D+
Sbjct: 64  ASIDRCVAELLD-RWGSIDI 82

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 26/133 (19%), Positives = 40/133 (30%), Gaps = 8/133 (6%)

Query: 149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK----FLKSLGVD---HVVDLSNE 201
           V LV GA  G+G A        G  +          K     +   G       VD+S+ 
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANI 261
             + +  E  +   L G DV+ +  G   +     +       +      G I  I A +
Sbjct: 63  DQVFAAVEQARKT-LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 262 ALVKNWTVHGLYW 274
              K     G   
Sbjct: 122 EAFKKEGHGGKII 134

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVDH---VVDL 198
            G   LV G + G+G   V+     GA++   +R  +++       +S G      V DL
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL 66

Query: 199 SNESVIPSVKEFLKARKLKGVDV 221
           S+ S    +   +       +++
Sbjct: 67  SSRSERQELMNTVANHFHGKLNI 89

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 15/95 (15%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD------HV 195
           S + +++ G++ G+G     +    GA +    R +E++    + +   GV        V
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 196 VDLSNESVIPSVKEFLKA--RKLKGVDVLYDPVGG 228
            D++ E       + + +  ++   +DVL +  G 
Sbjct: 64  ADVTTED---GQDQIINSTLKQFGKIDVLVNNAGA 95

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 270 HGLYWGSYKIHRPHV-LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIG 328
            G   G    H         L  L  +  +  + IHI++T    + N    A   R+   
Sbjct: 234 VGTRTGREMGHLAQNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRR--- 290

Query: 329 KVMIAFDDMK 338
            V +AFD M 
Sbjct: 291 GVEVAFDGMS 300

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-----KFLKSLGVD---HVVD 197
             + ++V G   G+G+A  +     GA +  + R A        K  K  GV    +  D
Sbjct: 8   VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 67

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLY 223
           +SN  ++    + + A  L  +  L 
Sbjct: 68  VSNTDIVTKTIQQIDA-DLGPISGLI 92

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI--KFLKSLGVD---HVVDLSN 200
             ++ ++ G A G+G A  +   V GA I              +++LG        D+S 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ 63

Query: 201 ESVIPSVKEFLKA--RKLKGVDVL 222
                 V+ F K         D+L
Sbjct: 64  PG---DVEAFGKQVISTFGRCDIL 84

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-----IKFLKSLGVDHV---VD 197
           +G+V L  GA  G+G          GA+++     + K     +  LK LG   V    D
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 64

Query: 198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG 228
           +S  S + ++ +   +    G+D +    G 
Sbjct: 65  ISKPSEVVALFDKAVSH-FGGLDFVMSNSGM 94

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 11/87 (12%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD------HV 195
           SG+ +++ G++ G+G +A  I    GA +    R  +++    + +   GV        V
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 196 VDLSNESVIPSVKEFLKARKLKGVDVL 222
            D++  S    +     A+    +D+L
Sbjct: 63  ADVTEASGQDDIINTTLAK-FGKIDIL 88

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD---HVVDLSNES 202
           +G+V++V G   G+G   V+     GA ++   +     + L+         + D++ E 
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQED 64

Query: 203 VIPSVKEFLKA 213
               VK  +  
Sbjct: 65  ---DVKTLVSE 72

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD---HVVDL 198
           +G+V LV GA G +G+A        G  I  +    E +      ++  GV+   +V D+
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV 63

Query: 199 SNESVIPSVKEFLKAR 214
           ++E  +    + +   
Sbjct: 64  TSEEAVIGTVDSVVRD 79

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVD-----HVVDLS 199
            G+V ++ G   G+G+A        GA ++   R ++   K  KS+G          D S
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSS 64

Query: 200 NESVIPSVKEFLKARKLKGVDVL 222
           +E     + +  +      V  L
Sbjct: 65  DEDGWTKLFDATEK-AFGPVSTL 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	344
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.95
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.95
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.92
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.91
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.91
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.61
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.52
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.33
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.32
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.25
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.24
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.2
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.12
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.07
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.05
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.02
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.01
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.01
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.99
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.98
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.97
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.96
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.95
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.94
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.93
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.93
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.92
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.92
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.9
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.88
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.85
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.84
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.83
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.83
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.79
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.78
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.77
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.76
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.76
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.76
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.76
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.75
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.75
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.75
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.74
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.72
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.72
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.72
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.71
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.69
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.69
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.69
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.69
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.68
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.67
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.66
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.65
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.64
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.61
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.56
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.51
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.5
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.45
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.43
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.41
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.4
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.4
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.4
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.39
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.33
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.32
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.3
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.29
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.26
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.25
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.24
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.21
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.19
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.19
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.16
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.15
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.12
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.12
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.11
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.09
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.03
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.97
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.92
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.91
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.89
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.89
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.87
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.86
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.85
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	96.84
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.81
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.75
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.74
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.68
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.62
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.62
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.53
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.51
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.49
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.44
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.43
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.42
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.42
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.33
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	96.3
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.23
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.23
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.06
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.05
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.03
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.91
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.9
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.88
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.87
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.83
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	95.82
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.79
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.75
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.75
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.73
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.72
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.66
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.64
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.62
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.61
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.52
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.47
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.45
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.39
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.37
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.36
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.28
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.21
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	95.17
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.16
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.15
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.13
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.12
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.08
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.02
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.99
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	94.98
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.92
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.91
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.86
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.86
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.85
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.79
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	94.79
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.78
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.75
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.75
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.75
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.71
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.63
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.59
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.56
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.52
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.49
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	94.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.45
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.44
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.42
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	94.36
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.35
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.19
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.12
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.98
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.76
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.69
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.62
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	93.58
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.58
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.53
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.44
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.44
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.4
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	93.37
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.36
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.32
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.22
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.2
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.2
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.2
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.18
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.15
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.04
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.91
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.85
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.78
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.67
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	92.48
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	92.43
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.4
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.32
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.28
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.22
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.2
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.18
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.16
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.13
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.12
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	92.08
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.04
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.01
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.0
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.0
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	91.91
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	91.87
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	91.78
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.76
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.71
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.68
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	91.66
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.64
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	91.6
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	91.51
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	91.5
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	91.49
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	91.48
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.32
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.11
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.07
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.9
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.85
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	90.83
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.7
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.67
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.64
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.4
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.33
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.23
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	90.05
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.01
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	89.81
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.72
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.66
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.65
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.62
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.58
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.57
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	89.49
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	89.44
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.35
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	89.34
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	89.3
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	89.3
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.28
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	89.24
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.14
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	89.14
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.06
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	88.77
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.52
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.5
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	88.44
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.42
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	88.36
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	87.97
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.68
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.66
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.58
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.54
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.54
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.5
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	87.48
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.46
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	87.33
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.32
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	87.08
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	86.82
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.82
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	86.68
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	86.62
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	86.57
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	86.38
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	86.17
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.12
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.97
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.66
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.66
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	85.42
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.25
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	85.23
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.18
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	84.97
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	84.87
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.77
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	84.68
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.5
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	84.05
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	83.79
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.73
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.69
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.68
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.49
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	83.44
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	83.4
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.2
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.2
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	83.18
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.16
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.08
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.04
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.02
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	83.02
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	82.95
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.75
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	82.66
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.44
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	82.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	81.88
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.73
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	81.54
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.49
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	81.04
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	80.69
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	80.23
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	80.15
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.11

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.1e-31  Score=207.11  Aligned_cols=144  Identities=28%  Similarity=0.488  Sum_probs=131.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|++++        +.+.++++.|+ |++|||+|||.+++||++|++.+.|.++....+|.++|||++|+|+
T Consensus         3 MkAv~~~~~G~p~~--------l~~~~~~~~P~-~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~   73 (150)
T d1yb5a1           3 MRAVRVFEFGGPEV--------LKLRSDIAVPI-PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIE   73 (150)
T ss_dssp             EEEEEESSCSSGGG--------EEEEEEEECCC-CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEE
T ss_pred             eeEEEEEccCCcce--------EEEEeecCCCC-CCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeE
Confidence            99999999998864        33345789999 6999999999999999999999999887777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196           81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                      ++|+++++|++||||++.. .+|+|+||+.+++   +++|+++++++||+++..+.|+|+++...+....|+++||+
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecceeeccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999998764 4699999999999   99999999999999999999999999888889999999984

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=1.2e-30  Score=210.93  Aligned_cols=180  Identities=27%  Similarity=0.339  Sum_probs=161.5

Q ss_pred             HHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCC
Q 019196          122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE  201 (344)
Q Consensus       122 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~  201 (344)
                      +|||+++++++|||+++.+.++++++++|||+||+|++|++++|+|+..|++++++++++++.+.++++|+++++++++.
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccccccC
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR  281 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (344)
                      ++   .+++.+.+.+.|+|++|||+|++.++.++++++++|+++.+|..............+.+++++.++.+.......
T Consensus        81 ~~---~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (183)
T d1pqwa_          81 DF---ADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQ  157 (183)
T ss_dssp             TH---HHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHC
T ss_pred             CH---HHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccC
Confidence            88   778888888999999999999999999999999999999999776543333334456889999998877766677


Q ss_pred             chhHHHHHHHHHHHHHCCceeEe
Q 019196          282 PHVLEDSLRELLLWAAKGLITIH  304 (344)
Q Consensus       282 ~~~~~~~~~~~~~~l~~g~i~~~  304 (344)
                      ++..++.++++++++++|+++|+
T Consensus       158 ~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         158 PARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCcee
Confidence            88888999999999999999974

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-29  Score=201.91  Aligned_cols=168  Identities=25%  Similarity=0.354  Sum_probs=145.6

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +|+++||+++++++|||+++.+.++++++++|||+|++|++|++++|+|+.+|++|+++++++++.+.++++|+++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            68999999999999999999888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  278 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (344)
                      ++.++   .+.+.+.+.+.++|++|||+|++.++.++++++++|+++.+|....  ...+...++.+++++.|+.++.. 
T Consensus        81 ~~~~~---~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~k~~~i~g~~~~~~-  154 (174)
T d1yb5a2          81 REVNY---IDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFSS-  154 (174)
T ss_dssp             TSTTH---HHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGGC-
T ss_pred             ccccH---HHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC--CCCCHHHHHHCCCEEEEEEecCC-
Confidence            99888   7778888899999999999999999999999999999999986442  23555677899999999875442 


Q ss_pred             ccCchhHHHHHHHHHHHHHC
Q 019196          279 IHRPHVLEDSLRELLLWAAK  298 (344)
Q Consensus       279 ~~~~~~~~~~~~~~~~~l~~  298 (344)
                        .+    +.++++.+++++
T Consensus       155 --~~----~~~~~~~~~l~~  168 (174)
T d1yb5a2         155 --TK----EEFQQYAAALQA  168 (174)
T ss_dssp             --CH----HHHHHHHHHHHH
T ss_pred             --CH----HHHHHHHHHHHH
Confidence              22    344555555443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=9.2e-29  Score=199.03  Aligned_cols=178  Identities=26%  Similarity=0.281  Sum_probs=150.5

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +|+++||+++++++|||++|.+.++++++++|||+|++|++|++++|+|+..|++|+++++++++.++++++|+++++|+
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~   80 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY   80 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence            58999999999999999999988999999999999998999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhcc-ceEEEEEEeccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVK-NWTVHGLYWGSY  277 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  277 (344)
                      +++++   .+++.+.+++.++|+++||++++.+..++.+++++|+++.++.........+...+..+ .+.+....+..+
T Consensus        81 ~~~d~---~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          81 REEDL---VERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             TTSCH---HHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             CCCCH---HHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeee
Confidence            99988   67788889999999999999999999999999999999999877766555554444333 333333332222


Q ss_pred             cccCchhHHHHHHHHHHHHHCCc
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                       ...++...+.++++++++++|.
T Consensus       158 -~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         158 -ITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHTTS
T ss_pred             -cCCHHHHHHHHHHHHHHHHCcC
Confidence             2345566778888999998873

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=1.1e-29  Score=203.70  Aligned_cols=142  Identities=21%  Similarity=0.251  Sum_probs=124.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (344)
                      |.|++++++++            +.++++|.|+ |+++||+||+.+++||++|++.+.+....  ....|+++|||++|+
T Consensus         2 ~maAVl~g~~~------------l~~~e~~~P~-~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~   68 (178)
T d1e3ja1           2 NLSAVLYKQND------------LRLEQRPIPE-PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGT   68 (178)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             ceEEEEEcCCc------------EEEEEeECCC-CCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceE
Confidence            56777777765            4568999999 69999999999999999999999875432  246789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhc
Q 019196           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAAL  127 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l  127 (344)
                      |+++|+++++|++||||+..                            ..+|+|+||+++++   +++|++++++++|++
T Consensus        69 Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~  148 (178)
T d1e3ja1          69 VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTH  148 (178)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEE
T ss_pred             EEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHH
Confidence            99999999999999999632                            23589999999999   999999999999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGAA  156 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  156 (344)
                      ++++.|||+++ +.++++++++|+|+|++
T Consensus       149 ~~~~~ta~~a~-~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         149 SFKLEQTVDAF-EAARKKADNTIKVMISC  176 (178)
T ss_dssp             EEEGGGHHHHH-HHHHHCCTTCSEEEEEC
T ss_pred             HhHHHHHHHHH-HHhCCCCCCEEEEEccc
Confidence            99999999998 68899999999999974

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2e-29  Score=190.27  Aligned_cols=128  Identities=29%  Similarity=0.500  Sum_probs=117.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|++           +.+++++.|+ |+++||+||+.+++||++|++.+.|.++....+|+++|||++|+| 
T Consensus         1 MkA~~~~~~G~~-----------l~~~e~~~p~-p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP-----------LELVDLPEPE-AEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-   67 (131)
T ss_dssp             CEEEEECSTTSC-----------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-
T ss_pred             CcEEEEccCCCC-----------CEEEEccCCC-CCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-
Confidence            999999999975           5678999999 699999999999999999999999988777789999999999999 


Q ss_pred             EeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196           81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                                +||+|+++..+|+|+||+.+++   +++|+++++++||++++.+.|||+++.+.+  +.+++||++
T Consensus        68 ----------vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 ----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             ----------TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ----------ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence                      3999999999999999999999   999999999999999999999999996655  458888864

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.9e-29  Score=196.58  Aligned_cols=172  Identities=23%  Similarity=0.262  Sum_probs=141.4

Q ss_pred             CCHHHHhhccchHHHHHHHHH---HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE
Q 019196          119 CDLLAAAALPVAFGTSHVALV---HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  195 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v  195 (344)
                      ||++|||++|.+++|||++++   ...+.+++++|||+|++|++|.+++|+|+..|++|+++++++++.++++++|++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            689999999999999997754   45778889999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      +++++.     ..+..+.+.++++|+|||++|++.++.++++|+++|+++.+|...+....++...++.|++++.|....
T Consensus        81 i~~~~~-----~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~  155 (176)
T d1xa0a2          81 LAREDV-----MAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSV  155 (176)
T ss_dssp             EECC--------------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSS
T ss_pred             eecchh-----HHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCC
Confidence            998653     234455677889999999999999999999999999999999988877778889999999999997532


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCceeE
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLITI  303 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~~  303 (344)
                      ..    |   .+...++++.++ +.++|
T Consensus       156 ~~----~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         156 YC----P---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SC----C---HHHHHHHHHHHH-TTTCC
T ss_pred             cC----C---HHHHHHHHHHHh-cccCC
Confidence            21    1   244445555553 66654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.96  E-value=8.6e-29  Score=200.49  Aligned_cols=182  Identities=23%  Similarity=0.289  Sum_probs=154.4

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe-cCCChHHHHHHHHHHHcCCeEEEEecCHH----HHHHHHhcCCc
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL-GAAGGVGVAAVQIGKVCGATIIAVARGAE----KIKFLKSLGVD  193 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~-g~~g~~G~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~~g~~  193 (344)
                      +|+++||+++++++|||++|.+.++++++++|+|+ |++|++|++++|+||.+|++|++++++.+    +.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            68999999999999999999989999999988886 77899999999999999999999886543    45667899999


Q ss_pred             EEEeCCCCCchhhHHHHHHH--hcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEE
Q 019196          194 HVVDLSNESVIPSVKEFLKA--RKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG  271 (344)
Q Consensus       194 ~v~~~~~~~~~~~~~~~~~~--~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (344)
                      ++++++..+..+..+.+.+.  ..+.++|++|||+|++.+..++++|+++|+++.+|..++....++...++.|++++.|
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~G  160 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAG  160 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEEE
Confidence            99987654332223333332  2467899999999999999999999999999999987766666788888999999999


Q ss_pred             EEeccccccCchhHHHHHHHHHHHHHCCc
Q 019196          272 LYWGSYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      +++..+...+++...+.++++.+++++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         161 FWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99888888888888899999999999886

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=9.7e-29  Score=196.36  Aligned_cols=138  Identities=20%  Similarity=0.361  Sum_probs=122.3

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTV   79 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V   79 (344)
                      ||+++.++|++           +.+++++.|++|+++||+|||.+++||++|++.+.|.++.  ...+|+++|||++|+|
T Consensus         1 kA~~~~~~g~p-----------l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V   69 (171)
T d1h2ba1           1 KAARLHEYNKP-----------LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI   69 (171)
T ss_dssp             CEEEESSTTSC-----------CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEE
T ss_pred             CEEEEEeCCCC-----------CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeee
Confidence            79999999976           5678999998667899999999999999999999886542  3467999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEe---------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           80 DAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      +++|++++++++||||...                           ..+|+|+||++++.   +++|++++++.++++.+
T Consensus        70 ~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~  149 (171)
T d1h2ba1          70 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLD  149 (171)
T ss_dssp             EEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGG
T ss_pred             ecccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHh
Confidence            9999999999999999642                           23489999999998   99999999988888889


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEE
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      +++|+|+++ +.+.+ .|++|||
T Consensus       150 ~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         150 EINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             GHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             HHHHHHHHH-HhcCC-CCCEEEe
Confidence            999999998 56777 8999998

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1.9e-28  Score=196.01  Aligned_cols=139  Identities=26%  Similarity=0.410  Sum_probs=122.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|++           +.++++|.|+ |+++||+|||.+++||++|++.++|.++....+|+++|||++|+|+
T Consensus         6 MkA~v~~~~g~p-----------l~l~evp~P~-~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~   73 (175)
T d1llua1           6 MKAAVVHAYGAP-----------LRIEEVKVPL-PGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVA   73 (175)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEECCC-CCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             cEEEEEEeCCCC-----------CEEEEeECCC-CCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEE
Confidence            999999999875           4568999999 6999999999999999999999999887667889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++++++++||||...                            ..+|+|+||+++++   +++|++++++.++++..
T Consensus        74 ~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~  153 (175)
T d1llua1          74 AVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLD  153 (175)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGG
T ss_pred             EeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHh
Confidence            999999999999999631                            23479999999999   99999999998888889


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEe
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                      .+.|+++.+ +.. ..+|++|||+
T Consensus       154 ~~~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         154 DINQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             GHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred             HHHHHHHHH-HhC-CCCCCEEEeC
Confidence            999999887 344 4479999985

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.95  E-value=1.5e-27  Score=192.05  Aligned_cols=169  Identities=27%  Similarity=0.400  Sum_probs=148.1

Q ss_pred             hhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          125 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       125 a~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      ++++++++|||++|.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.++++++|+++++++++.++ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~-   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS-   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSC-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccH-
Confidence            4578899999999999999999999999999999999999999999999999999999999999999999999999888 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCC------CCCcchhhhhccceEEEEEEecccc
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE------IPVIPANIALVKNWTVHGLYWGSYK  278 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  278 (344)
                        .+.+.+.+.+.|+|+||||+|++.++.++++++++|+++.+|..+..      ........++.|++++.|++..++ 
T Consensus        87 --~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~-  163 (182)
T d1v3va2          87 --LEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRW-  163 (182)
T ss_dssp             --HHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGC-
T ss_pred             --HHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEecc-
Confidence              67777788889999999999999999999999999999999965431      222444568899999999876554 


Q ss_pred             ccCchhHHHHHHHHHHHHHCC
Q 019196          279 IHRPHVLEDSLRELLLWAAKG  299 (344)
Q Consensus       279 ~~~~~~~~~~~~~~~~~l~~g  299 (344)
                        .++..++.++++++++++|
T Consensus       164 --~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         164 --QGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             --CHHHHHHHHHHHHHHHHTT
T ss_pred             --ChHHHHHHHHHHHHHHhCc
Confidence              3445567889999999876

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2.8e-28  Score=194.02  Aligned_cols=165  Identities=33%  Similarity=0.467  Sum_probs=132.9

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +|++|||+++++++|||+++. .++++++++|||+|++|++|++++|+|+.+|++|+++++++++++.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence            689999999999999999995 5899999999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  278 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (344)
                      .+.        ..+.+.+.|+|+||||+| +.++.++++++++|+++.+|...+....++...++.|++++.|++...+.
T Consensus        80 ~~~--------~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~~  150 (171)
T d1iz0a2          80 AEV--------PERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL  150 (171)
T ss_dssp             GGH--------HHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             hhh--------hhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcChh
Confidence            431        223345779999999988 67899999999999999999887666667778889999999999876653


Q ss_pred             ccCchhHHHHHHHHHH
Q 019196          279 IHRPHVLEDSLRELLL  294 (344)
Q Consensus       279 ~~~~~~~~~~~~~~~~  294 (344)
                      + .++...+.+..+.+
T Consensus       151 ~-~~~~~~~~~~~l~p  165 (171)
T d1iz0a2         151 R-EGALVEEALGFLLP  165 (171)
T ss_dssp             T-CHHHHHHHHHHHGG
T ss_pred             h-hHHHHHHHHHHHHH
Confidence            3 33333344444333

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=3.5e-28  Score=193.78  Aligned_cols=139  Identities=29%  Similarity=0.481  Sum_probs=118.8

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|++           +.+++++.|+ |+++||+|||.+++||++|++.+++.+.....+|+++|||++|+|+
T Consensus         1 MkA~v~~~~g~p-----------l~i~~v~~P~-~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv   68 (171)
T d1rjwa1           1 MKAAVVEQFKEP-----------LKIKEVEKPT-ISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVE   68 (171)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEE
T ss_pred             CeEEEEecCCCC-----------cEEEEeECCC-CCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEE
Confidence            999999999875           5568999999 6999999999999999999999988766667889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEE----------------------------ecCCCceeeEEeecc---cCCCCCCCHHHHhhccc
Q 019196           81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQ---FPVPKGCDLLAAAALPV  129 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~  129 (344)
                      ++|++++++++||||+.                            ...+|+|+||+++++   +++|++++++.|+ + .
T Consensus        69 ~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l-~  146 (171)
T d1rjwa1          69 EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-L-E  146 (171)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-G-G
T ss_pred             EecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-H-H
Confidence            99999999999999952                            123489999999998   9999999987655 4 3


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                      ...++++++. .+.+ +|++|||+|.
T Consensus       147 ~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         147 KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            5677777763 4555 5999999985

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=7.9e-28  Score=186.37  Aligned_cols=139  Identities=23%  Similarity=0.346  Sum_probs=121.1

Q ss_pred             ceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEEE
Q 019196            2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA   81 (344)
Q Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~   81 (344)
                      +.+.+.++|++++         +.+++.+.|+ |+++||+|||.++++|++|++.+.|.++. ..+|+++|||++|+|++
T Consensus         2 ~~i~~~~~G~pe~---------l~~~e~~~P~-p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~   70 (147)
T d1qora1           2 TRIEFHKHGGPEV---------LQAVEFTPAD-PAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSK   70 (147)
T ss_dssp             EEEEBSSCCSGGG---------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEE
T ss_pred             eEEEEcccCCCce---------eEEEEecCCC-CCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceee
Confidence            4678889999876         7788999999 69999999999999999999999998763 57899999999999999


Q ss_pred             eCCCCCCCCCCCEEEEe-cCCCceeeEEeecc---cCCCCCCCHHHH--hhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196           82 VGPNVSNFKVGDTVCGF-AALGSFAQFIVADQ---FPVPKGCDLLAA--AALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus        82 ~g~~~~~~~~Gd~V~~~-~~~g~~~~~~~~~~---~~~P~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      +|+++++|++||||+.. ...|+|+||+.++.   +++|++++++++  ++++...+++++++. ..++++|++|||
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~-~~~~~~G~~VLI  146 (147)
T d1qora1          71 VGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI  146 (147)
T ss_dssp             ECTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHH-HTTCCCBCCEEE
T ss_pred             eeeecccccccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEe
Confidence            99999999999999754 45699999999988   999999988644  556777788888885 468999999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=4.6e-28  Score=197.26  Aligned_cols=140  Identities=19%  Similarity=0.313  Sum_probs=125.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++.+           +.++|++.|+ |+++||+|||.++|||++|++.+.|... ...+|.++|||++|+|+
T Consensus         9 ~kAav~~~~~~p-----------l~i~ev~~P~-p~~~eVlIkv~a~giCgsD~~~~~g~~~-~~~~p~i~GhE~~G~v~   75 (199)
T d1cdoa1           9 CKAAVAWEANKP-----------LVIEEIEVDV-PHANEIRIKIIATGVCHTDLYHLFEGKH-KDGFPVVLGHEGAGIVE   75 (199)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTTCC-TTSCSEECCCCEEEEEE
T ss_pred             EEEEEEecCCCC-----------cEEEEEECCC-CCCCEEEEEEEEEEEecchhhhhhhccc-ccccccccccccceEEE
Confidence            579999998876           5678999999 6999999999999999999999998654 34689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++.+|++||||....                                                .+|+|+||++++.
T Consensus        76 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~  155 (199)
T d1cdoa1          76 SVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQ  155 (199)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEG
T ss_pred             EEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEch
Confidence            9999999999999995321                                                1389999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                         +++|++++++++|++.+++.|++.++....+.+.+++|||+
T Consensus       156 ~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         156 IAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             GGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence               99999999999999999999999999888889999999985

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=3.2e-27  Score=188.15  Aligned_cols=168  Identities=27%  Similarity=0.340  Sum_probs=151.0

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      +++.|||++++.+.|||+++ +..+++++++|+|+|++|++|++++++++..|+ +|++++++++|++.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999998 678999999999999889999999999999996 8999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  276 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (344)
                      +++.++   .+++.+.+.+.++|++|||+|+ ..++.++.+++++|+++.+|....+. .++...++.+++++.|++.++
T Consensus        80 ~~~~~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQDP---LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSCH---HHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCC
T ss_pred             cCCcCH---HHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCcc-ccCHHHHHhCCcEEEEEecCC
Confidence            988887   7778888888899999999997 46788999999999999999876554 466778899999999988655


Q ss_pred             ccccCchhHHHHHHHHHHHHHCCc
Q 019196          277 YKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                               .++++++++++++||
T Consensus       156 ---------~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 ---------QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---------HHHHHHHHHHHHTTS
T ss_pred             ---------HHHHHHHHHHHHcCC
Confidence                     477999999999986

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=9.9e-28  Score=186.81  Aligned_cols=140  Identities=25%  Similarity=0.381  Sum_probs=124.2

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++++...         +.+++++.|+ |++|||+|||.++|||++|+..+.|.++.....|+++|+|++|+|+
T Consensus         4 ~KA~v~~~~~~~~~---------~~i~~v~~P~-~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~   73 (152)
T d1xa0a1           4 FQAFVVNKTETEFT---------AGVQTISMDD-LPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (152)
T ss_dssp             EEEEEEEEETTEEE---------EEEEEEEGGG-SCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             eEEEEEEecCCceE---------EEEEEccCCC-CCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeee
Confidence            79999999998643         5578999999 6999999999999999999999999887777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                      +  +++..+++||+|++..      ++|+|+||+.++.   +++|+++++ +||++++..+|+|.++....+++ |++||
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL  149 (152)
T d1xa0a1          74 S--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVV  149 (152)
T ss_dssp             E--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEE
T ss_pred             c--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEE
Confidence            8  5677899999998653      3599999999999   999999985 68889999999999988888886 99999


Q ss_pred             Eec
Q 019196          152 VLG  154 (344)
Q Consensus       152 I~g  154 (344)
                      |+|
T Consensus       150 ~l~  152 (152)
T d1xa0a1         150 RLA  152 (152)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            986

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=2.2e-27  Score=192.43  Aligned_cols=140  Identities=19%  Similarity=0.259  Sum_probs=123.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.+           +.++++|.|+ |+++||+|||.++|||++|++++.|.+. ...+|+++|||++|+|+
T Consensus         7 ~kAav~~~~g~~-----------l~i~evp~P~-p~~~eVLVkv~a~gic~sD~~~~~G~~~-~~~~p~v~GhE~~G~V~   73 (197)
T d2fzwa1           7 CKAAVAWEAGKP-----------LSIEEIEVAP-PKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGIVE   73 (197)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEecCCCCcHHHHcCCcc-cccccccCCcceeeEEE
Confidence            899999999886           6679999999 6999999999999999999999999764 35689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|++++.+++||||+...                                                .+|+|+||+++++
T Consensus        74 ~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~  153 (197)
T d2fzwa1          74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (197)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             eecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEech
Confidence            9999999999999995310                                                1389999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                         +++|++++++++|++++++.|++.++.....-+.+++|||+
T Consensus       154 ~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         154 ISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             GGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence               99999999999999999999999998655555678888874

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=3e-26  Score=182.88  Aligned_cols=171  Identities=25%  Similarity=0.349  Sum_probs=146.7

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      ++++.|+.++|.+.|||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            4678899999999999999989999999999999998 9999999999999999 5667788899999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCC-CCCcchhhhhccceEEEEEEec
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      ++++++   .+++.+.+++ ++|++|||+|. +.++.++++++++|+++.+|..... ...++...++.+++++.|++.+
T Consensus        80 ~~~~~~---~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          80 SKTQDP---VAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TTTSCH---HHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CCCcCH---HHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            998877   5666666655 89999999997 5678899999999999999976533 3347777889999999998765


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCc
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      +..   +   +++++++++++++|+
T Consensus       156 ~~~---~---~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGS---P---KKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSC---H---HHHHHHHHHHHHTTS
T ss_pred             CCC---h---HHHHHHHHHHHHcCC
Confidence            532   1   467899999999986

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=4.5e-27  Score=188.22  Aligned_cols=138  Identities=17%  Similarity=0.329  Sum_probs=113.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC-------CCCCCcccCc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-------KPPLPFVPGS   73 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~   73 (344)
                      |||++++++|++           +.+++++.|+ |+++||+|||.+++||++|++.++|.++.       ..++|+++||
T Consensus         1 MKA~~~~~~G~p-----------l~i~dv~~P~-p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~Gh   68 (177)
T d1jvba1           1 MRAVRLVEIGKP-----------LSLQEIGVPK-PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH   68 (177)
T ss_dssp             CEEEEECSTTSC-----------CEEEECCCCC-CCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCC
T ss_pred             CeEEEEEeCCCC-----------CEEEEeeCCC-CCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccc
Confidence            999999999976           5568999999 69999999999999999999999987542       3468999999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEe---------------------------cCCCceeeEEeecc----cCCCCCCCHH
Q 019196           74 DYSGTVDAVGPNVSNFKVGDTVCGF---------------------------AALGSFAQFIVADQ----FPVPKGCDLL  122 (344)
Q Consensus        74 e~~G~V~~~g~~~~~~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~----~~~P~~~~~~  122 (344)
                      |++|+|+++|+++++|++||||...                           ..+|+|+||++++.    +++|+..+.+
T Consensus        69 E~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~  148 (177)
T d1jvba1          69 EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMI  148 (177)
T ss_dssp             EEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCC
T ss_pred             eEEEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHH
Confidence            9999999999999999999999632                           23489999999976    4555555544


Q ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEE
Q 019196          123 AAAALPVAFGTSHVALVHRAQLSSGQVLLV  152 (344)
Q Consensus       123 ~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI  152 (344)
                      .|+....++.++++++ +..++ .|++|||
T Consensus       149 ~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         149 TKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            4444457889999988 56666 5889987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=4.6e-26  Score=183.38  Aligned_cols=170  Identities=22%  Similarity=0.309  Sum_probs=145.7

Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +++.+|.+.|+++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~   80 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR   80 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEec
Confidence            356677888999999999988889999999999998 9999999999999999 79999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCC--CCcchhhhhccceEEEEEEec
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      ++.+..+..+++.+.+.+.|+|+||||+|. ..++.++++++++|+++.+|...+..  +..+...++.|++++.|++.+
T Consensus        81 ~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          81 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             cccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            988876667778888888999999999997 46788999999999999999765432  223334578899999998866


Q ss_pred             cccccCchhHHHHHHHHHHHHHCC
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKG  299 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g  299 (344)
                      +         .+.+++++++++++
T Consensus       161 ~---------~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 D---------TSHFVKTVSITSRN  175 (182)
T ss_dssp             C---------HHHHHHHHHHHHTC
T ss_pred             C---------HHHHHHHHHHHHHC
Confidence            5         36677788887765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=3.8e-26  Score=181.77  Aligned_cols=169  Identities=21%  Similarity=0.230  Sum_probs=141.7

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      +|+++|++++++++|+|+++ +.++++++++|+|+|+ |++|++++|+||.+|+ +|++++++++|++.++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence            58999999999999999998 6799999999999988 9999999999999998 7999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCC-Ccch--hhhhccceEEEEEE
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPA--NIALVKNWTVHGLY  273 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~--~~~~~~~~~~~~~~  273 (344)
                      +++.++   .+++.+.+++.|+|++|||+|. ..++.++++++++|+++.+|.+..... ..+.  .....+++++.+..
T Consensus        79 ~~~~~~---~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          79 YKNGHI---EDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GGGSCH---HHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             ccchhH---HHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            988877   6778888889999999999997 567999999999999999997654322 1111  12345678888876


Q ss_pred             eccccccCchhHHHHHHHHHHHHHCCc
Q 019196          274 WGSYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      .+..        +..++++.+++..|+
T Consensus       156 ~~~~--------r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--------RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--------HHHHHHHHHHHHTTS
T ss_pred             CCCC--------cccHHHHHHHHHcCC
Confidence            5442        345677888888775

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=8.3e-26  Score=179.18  Aligned_cols=165  Identities=22%  Similarity=0.344  Sum_probs=140.2

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +|+++||.++++++|||+++ +.++++++++|+|.|+ |++|++++|++|.+|++|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence            58999999999999999998 5689999999999998 999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  278 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (344)
                      ++.+.   .+.+.+.+. +..++++++.+.+.++.++++++++|+++.+|...+.. .++...++.+++++.|+..++  
T Consensus        79 ~~~~~---~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~~~i~Gs~~~~--  151 (166)
T d1llua2          79 RQEDP---VEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDF-PTPIFDVVLKGLHIAGSIVGT--  151 (166)
T ss_dssp             TTSCH---HHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEE-EEEHHHHHHTTCEEEECCSCC--
T ss_pred             cchhH---HHHHHHhhc-CCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCc-cCCHHHHHhCCcEEEEEeecC--
Confidence            88877   444544443 33444444455678899999999999999999776543 467778899999999987655  


Q ss_pred             ccCchhHHHHHHHHHHHHHCC
Q 019196          279 IHRPHVLEDSLRELLLWAAKG  299 (344)
Q Consensus       279 ~~~~~~~~~~~~~~~~~l~~g  299 (344)
                             .++++++++++++|
T Consensus       152 -------~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 -------RADLQEALDFAGEG  165 (166)
T ss_dssp             -------HHHHHHHHHHHHTT
T ss_pred             -------HHHHHHHHHHHHCc
Confidence                   46788999999887

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.94  E-value=5.5e-27  Score=191.61  Aligned_cols=137  Identities=26%  Similarity=0.380  Sum_probs=119.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|.+           +.++++|.|+ |+++||+|||.++|||++|++.++|.++  ..+|+++|||++|+|+
T Consensus         9 ~KAaV~~~~g~p-----------l~i~evp~P~-p~~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~v~GHE~~G~V~   74 (202)
T d1e3ia1           9 CKAAIAWKTGSP-----------LCIEEIEVSP-PKACEVRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECAGIVE   74 (202)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHTTCTTSC--CCSSBCCCCEEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEEEeccccceeeeecc--cccccccccccceEEe
Confidence            899999999876           6678999999 6999999999999999999999998765  4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec----------------------------------------------------CCCceeeEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA----------------------------------------------------ALGSFAQFI  108 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~----------------------------------------------------~~g~~~~~~  108 (344)
                      ++|++++++++||||+...                                                    ..|+|+||+
T Consensus        75 ~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~  154 (202)
T d1e3ia1          75 SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYT  154 (202)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEE
T ss_pred             eecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEE
Confidence            9999999999999996421                                                    128999999


Q ss_pred             eecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196          109 VADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus       109 ~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                      ++++   +++|++++++.++++.+++.++++++. .  +++|++|.|..
T Consensus       155 ~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~-~--~k~G~~V~vi~  200 (202)
T d1e3ia1         155 VVSEANLARVDDEFDLDLLVTHALPFESINDAID-L--MKEGKSIRTIL  200 (202)
T ss_dssp             EEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH-H--HHTTCCSEEEE
T ss_pred             EEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH-h--CCCCCEEEEEE
Confidence            9998   999999999999989899999988873 2  46788887753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-25  Score=178.26  Aligned_cols=169  Identities=18%  Similarity=0.277  Sum_probs=144.0

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      +|+++||.+ .++++||+++ +.++++++++|+|+|+ |++|++++|+++.+|+ +|++++++++|++.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            588999855 7999999998 6789999999999998 9999999999999999 7999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  276 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (344)
                      .++.+..+. .+....+.+.++|++|||+|.+ .++.++++++++|+++.+|.+.... .++...++.|++++.|++.+.
T Consensus        78 ~~~~~~~~~-~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~-~~~~~~~~~k~l~i~Gs~~~~  155 (171)
T d1pl8a2          78 ISKESPQEI-ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMT-TVPLLHAAIREVDIKGVFRYC  155 (171)
T ss_dssp             CSSCCHHHH-HHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCC-CCCHHHHHHTTCEEEECCSCS
T ss_pred             ccccccccc-cccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCC-ccCHHHHHHCCcEEEEEeCCH
Confidence            888776333 3334445677999999999975 6788999999999999999877654 477888899999999975321


Q ss_pred             ccccCchhHHHHHHHHHHHHHCCcee
Q 019196          277 YKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                                +.++++++++++|+++
T Consensus       156 ----------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         156 ----------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             ----------SCHHHHHHHHHTTSCC
T ss_pred             ----------hHHHHHHHHHHcCCCC
Confidence                      3578899999999874

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-26  Score=186.81  Aligned_cols=138  Identities=21%  Similarity=0.284  Sum_probs=115.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCC--CCCCCcccCcceeEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT   78 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~   78 (344)
                      |.|++++++++            +.+++++.|+ |+++||+|||.+++||++|++.+.+....  ....|+++|||++|+
T Consensus         8 ~~a~V~~gp~~------------l~l~evp~P~-p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~   74 (185)
T d1pl8a1           8 NLSLVVHGPGD------------LRLENYPIPE-PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (185)
T ss_dssp             CEEEEEEETTE------------EEEEECCCCC-CCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             CEEEEEeCCCe------------EEEEEeECCC-CCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeee
Confidence            67889988775            4558999999 69999999999999999999999864322  246789999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEeecc---cCCCCCCCHHHHhhc
Q 019196           79 VDAVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQ---FPVPKGCDLLAAAAL  127 (344)
Q Consensus        79 V~~~g~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~---~~~P~~~~~~~aa~l  127 (344)
                      |+++|+++++|++||||+..                            ..+|+|+||++++.   +++|+++++++|+++
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~  154 (185)
T d1pl8a1          75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF  154 (185)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE
T ss_pred             EEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH
Confidence            99999999999999999632                            13478999999998   999999999998765


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019196          128 PVAFGTSHVALVHRAQLSSGQVLLVLGA  155 (344)
Q Consensus       128 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~  155 (344)
                        ++++|++++ +..+++++++||| |+
T Consensus       155 --pl~~a~~a~-~~~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         155 --PLEKALEAF-ETFKKGLGLKIML-KC  178 (185)
T ss_dssp             --EGGGHHHHH-HHHHTTCCSEEEE-EC
T ss_pred             --HHHHHHHHH-HHhCCCCCCEEEE-Ee
Confidence              455677776 6778899999998 54

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.6e-26  Score=186.20  Aligned_cols=142  Identities=15%  Similarity=0.270  Sum_probs=116.6

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++..++....         +.+.+++.+. ++++||+|||.++|||++|++.+.|.++ ...+|+++|||++|+|+
T Consensus         7 ~ka~~~~~~~~~~~---------~~~~~~~p~p-~~~~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE~~G~Vv   75 (192)
T d1piwa1           7 FEGIAIQSHEDWKN---------PKKTKYDPKP-FYDHDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEIVGKVV   75 (192)
T ss_dssp             EEEEEECCSSSTTS---------CEEEEECCCC-CCTTEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCEEEEEE
T ss_pred             eEEEEEeCCCcCCc---------ceEeeccCCC-CCCCeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCcccccccchh
Confidence            78999988877532         2233455555 4999999999999999999999998765 35789999999999999


Q ss_pred             EeCCCC-CCCCCCCEEE-----------------------------------EecCCCceeeEEeecc---cCCCCCCCH
Q 019196           81 AVGPNV-SNFKVGDTVC-----------------------------------GFAALGSFAQFIVADQ---FPVPKGCDL  121 (344)
Q Consensus        81 ~~g~~~-~~~~~Gd~V~-----------------------------------~~~~~g~~~~~~~~~~---~~~P~~~~~  121 (344)
                      ++|+++ +.+++||||.                                   ++..+|+|+||+++++   +++|+++++
T Consensus        76 ~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~  155 (192)
T d1piwa1          76 KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWV  155 (192)
T ss_dssp             EECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCE
T ss_pred             hcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCH
Confidence            999987 6799999994                                   1223589999999998   999999999


Q ss_pred             HHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196          122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus       122 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                      ++|+.+...+.|||+++ +.++++++++|+|..
T Consensus       156 e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         156 ETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             EEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence            88775544467999998 689999999999864

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=7.2e-26  Score=179.63  Aligned_cols=165  Identities=20%  Similarity=0.182  Sum_probs=140.9

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++.+.||.+.|++.|+|+++ ..++++++++|+|+|+ |++|++++|++|.+|++|++++++++|+++++++|+++++++
T Consensus         1 lp~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeec
Confidence            45678999999999999999 4689999999999998 999999999999999999999999999999999999999987


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChh---hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGK---LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      .+...   ..   + ....++|.++||++..   .++.++++++++|+++.+|...+.. .++...++.|++++.|+..+
T Consensus        79 ~~~~~---~~---~-~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          79 LEEGD---WG---E-KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHE-MLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             GGTSC---HH---H-HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSC-CEEECGGGCBSCEEEECCCC
T ss_pred             cchHH---HH---H-hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccc-cccHHHHHhCCcEEEEEeeC
Confidence            65433   11   1 1245799999998863   4678999999999999999776554 46777889999999998876


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCcee
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                      +         .++++++++++++|+|+
T Consensus       151 ~---------~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---------IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---------HHHHHHHHHHHHHTTCC
T ss_pred             C---------HHHHHHHHHHHHhCCCC
Confidence            6         47889999999999885

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=5.1e-25  Score=175.32  Aligned_cols=168  Identities=21%  Similarity=0.301  Sum_probs=138.9

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +|+++||.+ .++++||+++ +.++++++++|+|+|+ |++|++++|+|+.+|++|++++++++|++.++++|++..+.+
T Consensus         1 VS~e~Aal~-ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            578999855 7899999998 6789999999999986 999999999999999999999999999999999999988776


Q ss_pred             CCCCc-hhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc
Q 019196          199 SNESV-IPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  276 (344)
Q Consensus       199 ~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (344)
                      +.... .....+....+.+.++|++|||+|.+ .++.++++++++|+++.+|.+.... .++...++.|++++.|++...
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~-~~~~~~~~~k~i~i~gs~~~~  156 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMV-TVPLVNACAREIDIKSVFRYC  156 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCC-CCCHHHHHTTTCEEEECCSCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCC-CcCHHHHHHCCCEEEEEECCH
Confidence            54322 22233444455678999999999985 5789999999999999999876543 477788899999999975322


Q ss_pred             ccccCchhHHHHHHHHHHHHHCCc
Q 019196          277 YKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                                ++++++++++++|+
T Consensus       157 ----------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         157 ----------NDYPIALEMVASGR  170 (170)
T ss_dssp             ----------SCHHHHHHHHHTTS
T ss_pred             ----------HHHHHHHHHHHcCC
Confidence                      34677889998885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=3.2e-25  Score=176.63  Aligned_cols=164  Identities=31%  Similarity=0.423  Sum_probs=143.4

Q ss_pred             HHHHhhccchHHHHHHHHHHhc-CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          121 LLAAAALPVAFGTSHVALVHRA-QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       121 ~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      +.++|+++++++|||+++.+.. .++++++|||.|+ |++|++++|+++.+|+ +|++++++++|++.++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            5788999999999999997766 4899999999998 9999999999999997 77888999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  277 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (344)
                      ++..    .++..+.+.+.++|++|||+|.. .++.++++++++|+++.+|... + ..++...++.+++++.|++.++ 
T Consensus        85 ~~~~----~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~-~~~~~~~l~~k~~~i~Gs~~~~-  157 (172)
T d1h2ba2          85 RRDP----VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-E-LRFPTIRVISSEVSFEGSLVGN-  157 (172)
T ss_dssp             TSCH----HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-C-CCCCHHHHHHTTCEEEECCSCC-
T ss_pred             cccH----HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-c-ccCCHHHHHhCCcEEEEEEecC-
Confidence            7643    56677888889999999999985 6899999999999999999643 3 3467788899999999998766 


Q ss_pred             cccCchhHHHHHHHHHHHHHCCc
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                              .++++++++++++||
T Consensus       158 --------~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 --------YVELHELVTLALQGK  172 (172)
T ss_dssp             --------HHHHHHHHHHHHTTS
T ss_pred             --------HHHHHHHHHHHHcCC
Confidence                    467899999999986

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.93  E-value=4.9e-26  Score=183.88  Aligned_cols=137  Identities=28%  Similarity=0.303  Sum_probs=113.9

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |+|+++.+.+.+           +.+++++.|+ |+++||+||+.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         4 ~~Aav~~~~g~~-----------l~l~~v~~P~-p~~geVlVkv~a~gic~sD~~~~~G~~~--~~~P~i~GHE~~G~V~   69 (194)
T d1f8fa1           4 IIAAVTPCKGAD-----------FELQALKIRQ-PQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIE   69 (194)
T ss_dssp             EEEEEBCSTTCC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEE
T ss_pred             eEEEEEcCCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEEEecCchHhhhhhccc--ccCCcccccceEEEee
Confidence            789999998875           6678999999 6999999999999999999999998875  4689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCceeeEEeec
Q 019196           81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD  111 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~  111 (344)
                      ++|+++++|++||||....                                                 ..|+|+||.+++
T Consensus        70 ~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~  149 (194)
T d1f8fa1          70 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  149 (194)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             ecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEe
Confidence            9999999999999995311                                                 015677888777


Q ss_pred             c---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE
Q 019196          112 Q---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV  177 (344)
Q Consensus       112 ~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~  177 (344)
                      +   +++|++++++++                         +++.|+ |++|++++|+++.+|+..++.
T Consensus       150 ~~~~~~ip~~i~~~~~-------------------------~~i~g~-g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         150 ENNTVKVTKDFPFDQL-------------------------VKFYAF-DEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGGEEEECTTCCGGGG-------------------------EEEEEG-GGHHHHHHHHHHTSCSEEEEE
T ss_pred             hHHEEECCCCCCcccE-------------------------EEEeCc-HHHHHHHHHHHHHcCCCEEEE
Confidence            7   777877775543                         445566 999999999999999965443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=3.2e-25  Score=176.28  Aligned_cols=168  Identities=26%  Similarity=0.339  Sum_probs=143.8

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ||+++||++++++.|||+++ ...+++++++|||+|+ |++|++++++++..|++|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            68999999999999999998 5788999999999987 999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK  278 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (344)
                      .+.+.   ...+...+. +..|+++++.+.+.++.++++++++|+++.+|...... .++...++.+++++.|+..++  
T Consensus        79 ~~~~~---~~~~~~~~~-~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~-~~~~~~~~~~~~~i~gs~~~~--  151 (168)
T d1rjwa2          79 LKEDA---AKFMKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEM-PIPIFDTVLNGIKIIGSIVGT--  151 (168)
T ss_dssp             TTSCH---HHHHHHHHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEE-EEEHHHHHHTTCEEEECCSCC--
T ss_pred             ccchh---hhhcccccC-CCceEEeecCCHHHHHHHHHHhccCCceEecccccCCC-CCCHHHHHHCCcEEEEEeeCC--
Confidence            88877   444555553 34555555555577899999999999999999876554 367777899999999987654  


Q ss_pred             ccCchhHHHHHHHHHHHHHCCcee
Q 019196          279 IHRPHVLEDSLRELLLWAAKGLIT  302 (344)
Q Consensus       279 ~~~~~~~~~~~~~~~~~l~~g~i~  302 (344)
                             .++++++++++++|+++
T Consensus       152 -------~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 -------RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             -------HHHHHHHHHHHHTTSCC
T ss_pred             -------HHHHHHHHHHHHhCCCC
Confidence                   47799999999999985

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=7.2e-26  Score=174.19  Aligned_cols=126  Identities=23%  Similarity=0.282  Sum_probs=110.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|+.+.         +.+++++.|+ |+++||+|||.|++||++|+....|.++....+|+++|+|++|+|+
T Consensus         1 MkA~v~~~~~~~~~---------l~i~~v~~p~-~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~   70 (146)
T d1o89a1           1 LQALLLEQQDGKTL---------ASVQTLDESR-LPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVR   70 (146)
T ss_dssp             CEEEEEECC---CE---------EEEEECCGGG-SCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEE
T ss_pred             CeEEEEEcCCCceE---------EEEEEcCCCC-CCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccce
Confidence            99999999998754         7788999999 5999999999999999999999999887777889999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHH
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVAL  138 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l  138 (344)
                      ++|.  ..+++||+|+...      .+|+|+||+++++   +++|+++|+++||++++.+.||+.++
T Consensus        71 ~~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          71 TSED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             EECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             eecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9765  4799999998643      3599999999999   99999999999999998888887544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.93  E-value=3.8e-25  Score=176.02  Aligned_cols=169  Identities=24%  Similarity=0.331  Sum_probs=137.4

Q ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCC
Q 019196          121 LLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLS  199 (344)
Q Consensus       121 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  199 (344)
                      +.+||++.|.+.|+|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            45789999999999999988899999999999998 9999999999999998 799999999999999999999999976


Q ss_pred             CCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccC-CCEEEEEeccCCCCCCcchh-hhhccceEEEEEEecc
Q 019196          200 NESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNW-GAQILVIGFASGEIPVIPAN-IALVKNWTVHGLYWGS  276 (344)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  276 (344)
                      +.+..  ..+..+.+.++++|++|||+|. +.+..++..+++ +|+++.+|....... ++.+ ..+.+++++.|+.+++
T Consensus        81 ~~d~~--~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~-~~~~~~~~~~~~~i~Gs~~G~  157 (174)
T d1p0fa2          81 DYDKP--IYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER-LPLDPLLLLTGRSLKGSVFGG  157 (174)
T ss_dssp             GCSSC--HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCC-EEECTHHHHTTCEEEECSGGG
T ss_pred             CchhH--HHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccc-cccCHHHHhCCCEEEEEEeCC
Confidence            64421  4556666677899999999997 466777777766 599999998664422 3332 3456788999988765


Q ss_pred             ccccCchhHHHHHHHHHHHHHCCc
Q 019196          277 YKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      +.       .+++.++++++++||
T Consensus       158 ~~-------~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         158 FK-------GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CC-------GGGHHHHHHHHHTTS
T ss_pred             CC-------HHHHHHHHHHHHcCC
Confidence            32       246788888888875

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=3.2e-28  Score=193.57  Aligned_cols=138  Identities=19%  Similarity=0.174  Sum_probs=110.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++++.+            ++++|.|+ |+++||+||+.+++||++|++.+.+.... ..+|+++|||++|+|+
T Consensus         1 MKa~v~~~~~~l~------------i~e~p~P~-~~~~eVlIkv~a~gic~sD~~~~~~~~~~-~~~P~i~GhE~~G~V~   66 (177)
T d1jqba1           1 MKGFAMLGINKLG------------WIEKERPV-AGSYDAIVRPLAVSPCTSDIHTVFEGALG-DRKNMILGHEAVGEVV   66 (177)
T ss_dssp             CEEEEEEETTEEE------------EEECCCCC-CCTTCEEEEEEEECCCHHHHHHHHHCTTC-CCSSEECCCCEEEEEE
T ss_pred             CeEEEEEeCCCeE------------EEEeeCCC-CCCCEEEEEEEEEecCCCcccccccCCCC-CCCCccCcceeeEEee
Confidence            9999999999854            48899999 69999999999999999999888765432 4679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------cCCCceeeEEeecc-----cCCCCCCCHHHHh
Q 019196           81 AVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQ-----FPVPKGCDLLAAA  125 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~-----~~~P~~~~~~~aa  125 (344)
                      ++|+++++|++||||...                              ..+|+|+||++++.     +++|+++++++++
T Consensus        67 ~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~  146 (177)
T d1jqba1          67 EVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLV  146 (177)
T ss_dssp             EECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGE
T ss_pred             ecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHH
Confidence            999999999999999521                              13489999999885     8999999998887


Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHH
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV  164 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~  164 (344)
                      ......   +..+        ++.++|.|+ |++|++++
T Consensus       147 ~~~~~~---~~~~--------~~~vlv~g~-gp~gl~aa  173 (177)
T d1jqba1         147 THVYHG---FDHI--------EEALLLMKD-KPKDLIKA  173 (177)
T ss_dssp             EEEEES---GGGH--------HHHHHHHHH-CCTTCSEE
T ss_pred             HHHHHH---HHHh--------cCceEEECC-CHHHhhee
Confidence            554332   2222        123677777 77776543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=7.7e-25  Score=173.90  Aligned_cols=169  Identities=24%  Similarity=0.356  Sum_probs=140.6

Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++||.++|.+.|+|+++.+.++++++++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.++++|++.++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            568999999999999999988999999999999998 9999999999999999 78899999999999999999999986


Q ss_pred             CCCC-chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCC-CEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          199 SNES-VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      ...+ .   .....+.+.+.|+|++|||+|. ..++.++++++++ |+++.+|...++.. ++...++ .+.++.|++++
T Consensus        81 ~~~~~~---~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~-i~~~~~~-~~k~i~Gs~~G  155 (174)
T d1e3ia2          81 RELDKP---VQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMT-IPTVDVI-LGRSINGTFFG  155 (174)
T ss_dssp             GGCSSC---HHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEE-EEHHHHH-TTCEEEECSGG
T ss_pred             ccchhh---hhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccc-cchHHHh-ccCEEEEEEee
Confidence            5433 3   5556666778899999999998 5778999999996 99999998765543 4444433 35688888776


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCc
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      ++.   +   .+++.++++++++||
T Consensus       156 s~~---~---~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         156 GWK---S---VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GCC---H---HHHHHHHHHHHHTTS
T ss_pred             CCC---h---HHHHHHHHHHHHCcC
Confidence            542   2   467888889888875

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=1.2e-28  Score=200.06  Aligned_cols=152  Identities=18%  Similarity=0.255  Sum_probs=124.7

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCC------CCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQL------NSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD   74 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e   74 (344)
                      +||+++++++..+            +++++.|++      |+++||+|||.+++||++|++.+.|.++  ..+|+++|||
T Consensus         2 ~kA~v~~~~~~le------------~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~--~~~P~v~GHE   67 (201)
T d1kola1           2 NRGVVYLGSGKVE------------VQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHE   67 (201)
T ss_dssp             EEEEEEEETTEEE------------EEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCC
T ss_pred             cEEEEEeCCCceE------------EEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc--cccceeccce
Confidence            5899999998754            478888764      3569999999999999999999998775  4689999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEe-------------------------------------cCCCceeeEEeecc-----
Q 019196           75 YSGTVDAVGPNVSNFKVGDTVCGF-------------------------------------AALGSFAQFIVADQ-----  112 (344)
Q Consensus        75 ~~G~V~~~g~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~-----  112 (344)
                      ++|+|+++|+++++|++||||...                                     ..+|+|+||+++|.     
T Consensus        68 ~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          68 ITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHC
T ss_pred             eeeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeE
Confidence            999999999999999999999511                                     12489999999974     


Q ss_pred             cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC
Q 019196          113 FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA  172 (344)
Q Consensus       113 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~  172 (344)
                      +++|++.+..+++++..++.++++++ ...+.+.+    ++|+ |++|++++|+||.+|+
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHH-TCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEee-CHHHHHHHHHHHHcCC
Confidence            89999877777777777888888776 33443333    3577 9999999999998885

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3e-25  Score=176.06  Aligned_cols=165  Identities=24%  Similarity=0.287  Sum_probs=137.3

Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      +.+++.+|.++|.+.|+|+++ +.++++++++|+|.|+ |++|++++|+||.+|+++++++++++++++++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEE
Confidence            345778888999999999999 6799999999999998 99999999999999999999999999999999999999998


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEecc
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS  276 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (344)
                      +.+...        .....+++|++|||+|.+ .+..++.+++++|+++.+|...+.....+...++.+++++.|++.++
T Consensus        81 ~~~~~~--------~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          81 SRNADE--------MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TTCHHH--------HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             CchhhH--------HHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            776432        123456899999999974 68999999999999999998776655567777889999999988766


Q ss_pred             ccccCchhHHHHHHHHHHHHHCCce
Q 019196          277 YKIHRPHVLEDSLRELLLWAAKGLI  301 (344)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~l~~g~i  301 (344)
                               .++++++++++++++|
T Consensus       153 ---------~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---------IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---------HHHHHHHHHHHHHHTC
T ss_pred             ---------HHHHHHHHHHHHHcCC
Confidence                     4778889999887664

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=2.5e-24  Score=172.32  Aligned_cols=171  Identities=26%  Similarity=0.314  Sum_probs=140.1

Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++||.++|.+.|+|+++.+.++++++++|||+|+ |++|++++|+++.+|+ +|++++++++|+++++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            588999999999999999988899999999999998 8999999999999997 78888899999999999999999987


Q ss_pred             CCC-CchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC-CCCCcchhhhhccceEEEEEEec
Q 019196          199 SNE-SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~~~-~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      .+. +.   ..+..+.+.+.++|++|||+|. ..++.+..+++++|.++.++.... .....+....+.+++++.|+.++
T Consensus        81 ~~~~~~---~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2fzwa2          81 QDFSKP---IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG  157 (176)
T ss_dssp             GGCSSC---HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CchhhH---HHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeee
Confidence            643 34   5556666677899999999997 456788999999988887765443 22333334456788999998876


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCc
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      +..   +   .+++.++++++++||
T Consensus       158 ~~~---~---~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         158 GWK---S---VESVPKLVSEYMSKK  176 (176)
T ss_dssp             GCC---H---HHHHHHHHHHHHTTS
T ss_pred             CCc---H---HHHHHHHHHHHHcCC
Confidence            542   1   467889999999886

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=1.4e-25  Score=178.99  Aligned_cols=133  Identities=19%  Similarity=0.254  Sum_probs=112.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.+++.+           +.+++++.|+ |+++||+|||.++|||++|++.++|.++. .++|+++|||++|+|+
T Consensus         5 ~kA~v~~~~~~p-----------l~i~ev~~P~-~~~~evlVkv~a~gIC~sD~~~~~G~~~~-~~~P~vlGHE~~G~V~   71 (184)
T d1vj0a1           5 AHAMVLEKFNQP-----------LVYKEFEISD-IPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVV   71 (184)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEE
T ss_pred             EEEEEEecCCCC-----------cEEEEeeCCC-CCCCEEEEEEEEECCCCCchhheeccCCc-cccccccceeeeeeee
Confidence            799999998875           5678999999 59999999999999999999999987653 4689999999999999


Q ss_pred             EeCCCCC-----CCCCCCEEEEe------------------------------------cCCCceeeEEeec-c---cCC
Q 019196           81 AVGPNVS-----NFKVGDTVCGF------------------------------------AALGSFAQFIVAD-Q---FPV  115 (344)
Q Consensus        81 ~~g~~~~-----~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~-~---~~~  115 (344)
                      ++|++++     .+++||+|...                                    ..+|+|+||++++ +   +++
T Consensus        72 ~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~i  151 (184)
T d1vj0a1          72 EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKV  151 (184)
T ss_dssp             EESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEE
T ss_pred             EEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEEC
Confidence            9999886     46899999521                                    0158999999885 3   889


Q ss_pred             CCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEe
Q 019196          116 PKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL  153 (344)
Q Consensus       116 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~  153 (344)
                      |+++++++      ++++|++++ ..++++++++|||+
T Consensus       152 p~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         152 SEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             CTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             CCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            99998653      456788887 67899999999997

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=1.1e-24  Score=175.60  Aligned_cols=173  Identities=27%  Similarity=0.384  Sum_probs=133.1

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCC--CEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCHHHHH-HHHhcCCcE
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIK-FLKSLGVDH  194 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~--~~vlI~g~~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~-~~~~~g~~~  194 (344)
                      +|+.+.| ++++++|||++|.+.++++++  ++|||+||+|++|++++|+||.+|++ |++++.++++.. .++++|++.
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            5666665 778999999999999999987  88999999999999999999999995 555666766555 446899999


Q ss_pred             EEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCC---------cchhhhhcc
Q 019196          195 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV---------IPANIALVK  265 (344)
Q Consensus       195 v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---------~~~~~~~~~  265 (344)
                      ++|+.++++   .+.+.+.+ +.|+|++|||+|++.++.++++++++|+++.+|..++....         .....+..|
T Consensus        81 vi~~~~~~~---~~~~~~~~-~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k  156 (187)
T d1vj1a2          81 AVNYKTGNV---AEQLREAC-PGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKER  156 (187)
T ss_dssp             EEETTSSCH---HHHHHHHC-TTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHT
T ss_pred             EeeccchhH---HHHHHHHh-ccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhc
Confidence            999999887   44444445 57999999999999999999999999999999975432111         112235678


Q ss_pred             ceEEEEEEeccccccCchhHHHHHHHHHHHHHCCc
Q 019196          266 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      ++++.++....+.    +..++.++++.+++++|+
T Consensus       157 ~i~~~g~~~~~~~----~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         157 NITRERFTVLNYK----DKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TCEEEECCGGGCG----GGHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEeEecchH----HHHHHHHHHHHHHHHCcC
Confidence            9999987655433    334578889999998885

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=2.1e-27  Score=186.98  Aligned_cols=146  Identities=21%  Similarity=0.220  Sum_probs=126.4

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++.++|+...         +.+++++.|+ +++|||+|||.|++||++|++.+.|.++.....|.++|+|++|+|+
T Consensus         4 ~ka~~~~~~g~~~~---------l~~~~v~~p~-l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~   73 (162)
T d1tt7a1           4 FQALQAEKNADDVS---------VHVKTISTED-LPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVV   73 (162)
T ss_dssp             EEEEEECCGGGSCC---------CEEEEEESSS-SCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEE
T ss_pred             EEEEEEEecCCCeE---------EEEEEcCCCC-CCCCEEEEEEEEecccchhhheeeecccccccceeeeeeecccccc
Confidence            79999999888654         7789999999 5999999999999999999999999887666788999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEE
Q 019196           81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL  151 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vl  151 (344)
                      +  +.++++++||+|+...      .+|+|+||+++++   +++|+++|+++||+++..++|||.++. ..+...+++||
T Consensus        74 ~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vl  150 (162)
T d1tt7a1          74 S--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDIL  150 (162)
T ss_dssp             E--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTT
T ss_pred             c--ccccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEE
Confidence            8  5677899999998654      3599999999999   999999999999999999999997653 33445567899


Q ss_pred             EecCCChH
Q 019196          152 VLGAAGGV  159 (344)
Q Consensus       152 I~g~~g~~  159 (344)
                      |+|++|++
T Consensus       151 i~ga~G~v  158 (162)
T d1tt7a1         151 QNRIQGRV  158 (162)
T ss_dssp             TTCCSSEE
T ss_pred             EECCcceE
Confidence            99887653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.5e-25  Score=175.87  Aligned_cols=169  Identities=22%  Similarity=0.229  Sum_probs=137.5

Q ss_pred             CCHHHHhhccchHHHHHHHHHH--hcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE
Q 019196          119 CDLLAAAALPVAFGTSHVALVH--RAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV  195 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~--~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v  195 (344)
                      +|+.+||+++++++|||++++.  ... ..++++|||+|++|++|.+++|+||.+|++|+++++++++.+.++++|++++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v   80 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV   80 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence            5889999999999999987642  233 3445699999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          196 VDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      +++++.+..+.       .....+|.++|+++++.+..++++++++|+++.+|...+.....+...++.|++++.|++..
T Consensus        81 i~~~~~~~~~~-------l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~  153 (177)
T d1o89a2          81 LPRDEFAESRP-------LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSV  153 (177)
T ss_dssp             EEGGGSSSCCS-------SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSS
T ss_pred             cccccHHHHHH-------HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecc
Confidence            99887655221       13456899999999999999999999999999999888766667778889999999997643


Q ss_pred             cccccCchhHHHHHHHHHHHHH
Q 019196          276 SYKIHRPHVLEDSLRELLLWAA  297 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~  297 (344)
                      .   ..++...+.++++.+.+.
T Consensus       154 ~---~~~~~~~~~~~~L~~~l~  172 (177)
T d1o89a2         154 M---TPPERRAQAWQRLVADLP  172 (177)
T ss_dssp             S---CCHHHHHHHHHHHHHHSC
T ss_pred             c---CCHHHHHHHHHHHHHhcc
Confidence            2   234444455555555443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.92  E-value=7.8e-24  Score=169.17  Aligned_cols=172  Identities=25%  Similarity=0.270  Sum_probs=140.5

Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++||.++|.+.|+|+++.+.++++++++|+|+|+ |++|++++++++..|+ +|++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            689999999999999999988899999999999998 9999999999999987 79999999999999999999999998


Q ss_pred             CCCCchhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEeccc
Q 019196          199 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY  277 (344)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (344)
                      .+.+..  .++..+.+.+.|+|++||++|. ..+..+..+++++|.++.++...+.....+....+.+++++.|+..+++
T Consensus        81 ~~~~~~--~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          81 NDHSEP--ISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GGCSSC--HHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             CCcchh--HHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            765431  4566777778899999999997 4567788887777555544444434344555566778899999887664


Q ss_pred             cccCchhHHHHHHHHHHHHHCCc
Q 019196          278 KIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      ..      ++++.++++++++||
T Consensus       159 ~~------~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KG------KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CH------HHHHHHHHHHHHTTS
T ss_pred             cH------HHHHHHHHHHHHcCC
Confidence            21      478889999999886

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.91  E-value=1.1e-23  Score=168.44  Aligned_cols=171  Identities=23%  Similarity=0.285  Sum_probs=140.0

Q ss_pred             CHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeC
Q 019196          120 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL  198 (344)
Q Consensus       120 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  198 (344)
                      ++++||+++|.+.|+|+++.+.+++++|++|||+|+ |++|++++++++..|+ +|++++++++|.++++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            578999999999999999989999999999999999 9999999999999986 89999999999999999999999986


Q ss_pred             CC-CCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEEecc-CCCCCCcchhhhhccceEEEEEEec
Q 019196          199 SN-ESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFA-SGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       199 ~~-~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      .+ .+.   ..+..+.+.+.|+|++|||+|.+ .++.++.+++++|..+.++.. ...........++.+++++.|+..+
T Consensus        81 ~~~~~~---~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G  157 (176)
T d2jhfa2          81 QDYKKP---IQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFG  157 (176)
T ss_dssp             GGCSSC---HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             CCchhH---HHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEe
Confidence            54 334   56677777788999999999975 567788889887555555443 3333333434567899999998876


Q ss_pred             cccccCchhHHHHHHHHHHHHHCCc
Q 019196          276 SYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                      ++.   +   .+++.++++++.+||
T Consensus       158 ~~~---~---~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         158 GFK---S---KDSVPKLVADFMAKK  176 (176)
T ss_dssp             GCC---H---HHHHHHHHHHHHTTS
T ss_pred             CCC---H---HHHHHHHHHHHHCcC
Confidence            542   1   467888999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=7.7e-24  Score=168.59  Aligned_cols=170  Identities=19%  Similarity=0.263  Sum_probs=136.4

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      .++++||.++|.+.|+|+++.+.++++++++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.++++|+++++|
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in   80 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS   80 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEEC
Confidence            3589999999999999999988899999999999998 9999999999999996 8999999999999999999999999


Q ss_pred             CCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccC-CCEEEEEeccCCCCCCcchhhhhccceEEEEEEec
Q 019196          198 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNW-GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG  275 (344)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (344)
                      +.+.+..  .+.+.+.+.+.|+|++|||+|.. .+..++..+.+ +|+++.+|..............+.++.++.|++.+
T Consensus        81 ~~~~~~~--~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          81 PKDSTKP--ISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFG  158 (176)
T ss_dssp             GGGCSSC--HHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             ccccchH--HHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEe
Confidence            7765431  44566667788999999999975 56666766655 59999999876554332223345678899998766


Q ss_pred             cccccCchhHHHHHHHHHHHHH
Q 019196          276 SYKIHRPHVLEDSLRELLLWAA  297 (344)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~  297 (344)
                      +..   |   .+++.++++++.
T Consensus       159 ~~~---~---~~dip~li~~~~  174 (176)
T d1d1ta2         159 GLK---S---RDDVPKLVTEFL  174 (176)
T ss_dssp             GCC---H---HHHHHHHHHHHT
T ss_pred             CCC---c---HHHHHHHHHHHh
Confidence            532   1   356666666543

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.91  E-value=1.7e-24  Score=176.06  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=113.0

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||+++++++++           +.+++++.|+ |+++||+|||.++|||++|++.++|.++.  .+|+++|||++|+|+
T Consensus         9 ~KAavl~~~~~~-----------l~i~ev~~P~-p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv   74 (198)
T d2jhfa1           9 CKAAVLWEEKKP-----------FSIEEVEVAP-PKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVE   74 (198)
T ss_dssp             EEEEEBCSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEE
T ss_pred             EEEEEEecCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEE
Confidence            899999998876           5678999999 69999999999999999999999998764  679999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|++++++++||||+...                                                ..|+|+||+++++
T Consensus        75 ~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~  154 (198)
T d2jhfa1          75 SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEG
T ss_pred             ecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCH
Confidence            9999999999999995210                                                1278999999998


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEec
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG  154 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g  154 (344)
                         +++|+.++++.+++...++.+...+.   ..+++|++|+|..
T Consensus       155 ~~~~~~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         155 ISVAKIDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             GGEEECCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             HHeEECCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence               89999999887766555554443322   2356788887753

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.9e-24  Score=169.61  Aligned_cols=128  Identities=18%  Similarity=0.253  Sum_probs=106.1

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++.+.++++           +.++|++.|+ |+++||+|||.+++||++|++.+.|.+.. ..+|+++|||++|+|+
T Consensus         1 m~a~~~~~~~~p-----------l~i~ev~~P~-pg~geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~   67 (179)
T d1uufa1           1 IKAVGAYSAKQP-----------LEPMDITRRE-PGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVV   67 (179)
T ss_dssp             CEEEEBSSTTSC-----------CEEEECCCCC-CCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEE
T ss_pred             CeEEEEccCCCC-----------CEEEEecCCC-CCCCEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccch
Confidence            999999999987           7789999999 79999999999999999999999987653 5789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEe------------------------------------cCCCceeeEEeecc---cCCCCCCCH
Q 019196           81 AVGPNVSNFKVGDTVCGF------------------------------------AALGSFAQFIVADQ---FPVPKGCDL  121 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~~~---~~~P~~~~~  121 (344)
                      ++|++++++++||+|...                                    ..+|+|+||+++++   +++|++...
T Consensus        68 ~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~  147 (179)
T d1uufa1          68 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIE  147 (179)
T ss_dssp             EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEE
T ss_pred             hhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcC
Confidence            999999999999999411                                    11388999999998   888866532


Q ss_pred             HHHhhccchHHHHHHHHHHhcCCC
Q 019196          122 LAAAALPVAFGTSHVALVHRAQLS  145 (344)
Q Consensus       122 ~~aa~l~~~~~ta~~~l~~~~~~~  145 (344)
                      ..   +..++.++++++ ..+.++
T Consensus       148 ~~---~a~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         148 MI---RADQINEAYERM-LRGDVK  167 (179)
T ss_dssp             EE---CGGGHHHHHHHH-HTTCSS
T ss_pred             hh---HhchhHHHHHHH-HHhCcc
Confidence            22   235677888887 345543

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=4.3e-25  Score=178.99  Aligned_cols=137  Identities=17%  Similarity=0.257  Sum_probs=113.5

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEEE
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD   80 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~   80 (344)
                      |||++++++|++           +.+++++.|+ |+++||+|||.+++||++|++.+.|.++  ..+|+++|||++|+|+
T Consensus         9 ~KAav~~~~g~~-----------l~i~ev~~P~-p~~~eVlVkv~a~gICgsDlh~~~G~~~--~~~P~i~GHE~~G~Vv   74 (198)
T d1p0fa1           9 CKAAVAWEPHKP-----------LSLETITVAP-PKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVE   74 (198)
T ss_dssp             EEEEEBSSTTSC-----------CEEEEEEECC-CCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEE
T ss_pred             EEEEEEccCCCC-----------CEEEEEECCC-CCCCEEEEEEEEEEEecccceeeeeccc--cccccccceeeeeeee
Confidence            899999999865           6678999999 6999999999999999999999998875  4689999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEec------------------------------------------------CCCceeeEEeecc
Q 019196           81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ  112 (344)
Q Consensus        81 ~~g~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~  112 (344)
                      ++|+++.++++||||....                                                .+|+|+||+.+++
T Consensus        75 ~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~  154 (198)
T d1p0fa1          75 SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD  154 (198)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred             ecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecH
Confidence            9999999999999995210                                                1268999999999


Q ss_pred             ---cCCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHH
Q 019196          113 ---FPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVA  162 (344)
Q Consensus       113 ---~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~  162 (344)
                         +++|++++++.++...+...+...          +++|||.|+ |++|++
T Consensus       155 ~~~~kip~~~~~~~~~~~~~~~~~v~~----------~~~vlv~G~-G~iGl~  196 (198)
T d1p0fa1         155 IAVAKIDPKINVNFLVSTKLTLDQINK----------AFELLSSGQ-GVRSIM  196 (198)
T ss_dssp             TSEEEECTTSCGGGGEEEEECGGGHHH----------HHHHTTTSS-CSEEEE
T ss_pred             HHEEECCCCCCHHHHHHhhcchhhcCC----------CCEEEEECC-CcceEE
Confidence               899999998877655555444332          234788888 888763

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.1e-22  Score=164.32  Aligned_cols=165  Identities=19%  Similarity=0.161  Sum_probs=135.7

Q ss_pred             HHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEeCCC
Q 019196          122 LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSN  200 (344)
Q Consensus       122 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~  200 (344)
                      ++.++++..++|||+++ +.++++++++|||+|+ |++|++++++++..|+ +|++++.+++|++.++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence            56778999999999998 6799999999999998 9999999999999998 8999999999999999999999999888


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEeccCCCCC---------
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGFASGEIP---------  255 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~---------  255 (344)
                      .++   .+++.+.+.+.++|++|||+|.                +.++.++++++++|+++.+|.+.+..+         
T Consensus        80 ~~~---~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 TPL---HEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             SCH---HHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHT
T ss_pred             cCH---HHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhc
Confidence            887   6677778889999999999984                367899999999999999997654321         


Q ss_pred             ---CcchhhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCc
Q 019196          256 ---VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGL  300 (344)
Q Consensus       256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~  300 (344)
                         .+++..++.|+.++.+-..         ..++.++++++++.+++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~g~~---------~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHTGQT---------PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEESSC---------CHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceeccCCC---------chHHHHHHHHHHHHcCC
Confidence               2333445677877654111         11455677888887764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=6.7e-26  Score=181.41  Aligned_cols=156  Identities=19%  Similarity=0.156  Sum_probs=126.3

Q ss_pred             CceEEecccCCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCC---------CCCCccc
Q 019196            1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---------PPLPFVP   71 (344)
Q Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~   71 (344)
                      |||++++++|+|..++      .+...++|.|+ |+++||+|||.+++||++|++.++|.++..         ...|+++
T Consensus         4 ~kA~v~~~~G~p~~~l------~l~~~~~p~p~-~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~   76 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVL------FTQSFEIDDDN-LAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC   76 (175)
T ss_dssp             EEEEEESSCSCHHHHC------EEEEEEECTTS-CCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred             eEEEEEccCCCccccc------EEEEEECCCCC-CCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccc
Confidence            7999999999863211      13345788888 599999999999999999999999876532         2467889


Q ss_pred             CcceeEEEEEeCCCCCCCCCCCEEEEec-CCCceeeEEeecc---cCCCCCCCHHHHhhccchHHHHHHHHHH-hcCCCC
Q 019196           72 GSDYSGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQ---FPVPKGCDLLAAAALPVAFGTSHVALVH-RAQLSS  146 (344)
Q Consensus        72 G~e~~G~V~~~g~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~---~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~  146 (344)
                      |+|++|+|++.|.++..++.||+|+... ..|+|+||+++++   +++|++++.+.+  ++...+|||+++.. ..++++
T Consensus        77 G~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~  154 (175)
T d1gu7a1          77 GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKP  154 (175)
T ss_dssp             CSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSC
T ss_pred             ccccccccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999998654 3589999999998   999998754443  45677888888743 457899


Q ss_pred             CCEEEEec-CCChHHHHHHH
Q 019196          147 GQVLLVLG-AAGGVGVAAVQ  165 (344)
Q Consensus       147 ~~~vlI~g-~~g~~G~~~~~  165 (344)
                      +++|||+| |+|++|++++|
T Consensus       155 g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         155 LHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHHHHHHTGGGSCEEEE
T ss_pred             CCEEEEECccchhhhheEEe
Confidence            99999998 55789987765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=7.4e-24  Score=166.49  Aligned_cols=141  Identities=26%  Similarity=0.302  Sum_probs=118.5

Q ss_pred             chHHHHHHH---HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          129 VAFGTSHVA---LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       129 ~~~~ta~~~---l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      +++.|||.+   |.+.....++++|||+|++|++|.+++|+||.+|++|++++++++|.++++++|++.++++++...  
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~--   80 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYD--   80 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCS--
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhc--
Confidence            345677755   444455667888999999999999999999999999999999999999999999999998643211  


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEeccCCCCCCcchhhhhccceEEEEEEe
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYW  274 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (344)
                         +....+.++++|++||++|++.++.++++++++|+++.+|...+.....+...++.|++++.|+..
T Consensus        81 ---~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          81 ---GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             ---SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             ---hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence               222334677899999999999999999999999999999999887666788889999999999753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=5.3e-16  Score=103.23  Aligned_cols=74  Identities=28%  Similarity=0.342  Sum_probs=67.7

Q ss_pred             CCHHHHhhccchHHHHHHHHHH---hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC
Q 019196          119 CDLLAAAALPVAFGTSHVALVH---RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV  192 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~---~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~  192 (344)
                      +|++||++++..+.|||++++.   ....+++++|||+|++|++|.+++|+++.+|++|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            5899999999999999988753   3456889999999999999999999999999999999999999999999984

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.52  E-value=8.6e-14  Score=105.53  Aligned_cols=131  Identities=13%  Similarity=0.070  Sum_probs=91.5

Q ss_pred             ceEEeccc--CCCCccccCCCCceeeecccCCCCCCCCCeEEEEEEEeecChhhHHHHHhcCCCCCCCCcccCcceeEEE
Q 019196            2 EALVCRKL--GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV   79 (344)
Q Consensus         2 ~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V   79 (344)
                      |+|++.+.  |.|.       ..-+.+++.++|+ |++|||+||+.|.++++......   .+  ...+-++..+.+|+|
T Consensus         5 k~~vl~~~P~G~P~-------~~~f~l~e~~ip~-~~~gevLvk~~~~svDp~~R~~~---~~--~~~g~~~~g~~vg~V   71 (147)
T d1v3va1           5 KSWTLKKHFQGKPT-------QSDFELKTVELPP-LKNGEVLLEALFLSVDPYMRIAS---KR--LKEGAVMMGQQVARV   71 (147)
T ss_dssp             EEEEESSCCCSSCC-------GGGEEEEEEECCC-CCTTCEEEEEEEEECCTHHHHHG---GG--SCTTSBCCCCEEEEE
T ss_pred             EEEEEccCCCCCCc-------ccceEEEEEECCC-CCCCEEEEEEEEEeEcccccccc---cc--cccCCccccceEEEE
Confidence            56777664  3332       2236677899999 69999999999999998643221   11  122334556889999


Q ss_pred             EEeCCCCCCCCCCCEEEEecCCCceeeEEeecc---cCCCCCCCH-----HHHhhccchHHH-HHHHHHHhcCCCCCCEE
Q 019196           80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ---FPVPKGCDL-----LAAAALPVAFGT-SHVALVHRAQLSSGQVL  150 (344)
Q Consensus        80 ~~~g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~---~~~P~~~~~-----~~aa~l~~~~~t-a~~~l~~~~~~~~~~~v  150 (344)
                      ++  |++++|++||+|++.   ++|+||.+.+.   .++|++.+.     ...+++...++| ||.++.  ...+.|++|
T Consensus        72 v~--S~~~~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getv  144 (147)
T d1v3va1          72 VE--SKNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAV  144 (147)
T ss_dssp             EE--ESCTTSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEE
T ss_pred             EE--eCCCcccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEE
Confidence            88  778899999999986   67999999988   667665432     234556677777 454664  334679998


Q ss_pred             EE
Q 019196          151 LV  152 (344)
Q Consensus       151 lI  152 (344)
                      ++
T Consensus       145 v~  146 (147)
T d1v3va1         145 VT  146 (147)
T ss_dssp             EE
T ss_pred             Ee
Confidence            86

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.33  E-value=3.1e-05  Score=63.37  Aligned_cols=175  Identities=19%  Similarity=0.211  Sum_probs=99.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .++++||+|+++++|.+.++.+...|++|++++++.++.+.+     ++.|.....-.-+....+.++++.+..  ..++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998876543     334544322112222222233333322  1247


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccCC-CCCCc-chhh-------
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFASG-EIPVI-PANI-------  261 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~-~~~~~-~~~~-------  261 (344)
                      +|++++++|..                          ..+.++..|+  .+|+++.++.... ..... ...+       
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal  163 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  163 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence            99999998841                          1245566664  4679999876432 21111 1111       


Q ss_pred             ----------hhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          262 ----------ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       262 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                                +..+++++.....+.......+.....-+..-.+.+.-    +....-..+|+.++..+|.+.
T Consensus       164 ~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~----pl~R~~~pedvA~~v~fL~S~  232 (251)
T d1vl8a_         164 ASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI----PLGRTGVPEDLKGVAVFLASE  232 (251)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC----TTSSCBCGGGGHHHHHHHHSG
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhCc
Confidence                      23567888887766543221111111111111222221    111223578888888887753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.32  E-value=2.4e-06  Score=65.36  Aligned_cols=104  Identities=22%  Similarity=0.262  Sum_probs=75.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeC-CC---------------CCchh-hHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDL-SN---------------ESVIP-SVKE  209 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~-~~---------------~~~~~-~~~~  209 (344)
                      ..+|+|+|+ |..|+.+++.|+.+|++|++.+.+.++++.+++++...+... ..               .++.. ..+.
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            458999999 999999999999999999999999999999999886543110 00               01111 1222


Q ss_pred             HHHHhcCCCccEEEeCCCh-----h--hHHHHHhcccCCCEEEEEeccCCC
Q 019196          210 FLKARKLKGVDVLYDPVGG-----K--LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      +.+..  ...|+||-++--     +  .-++.++.|+|++.++++....+.
T Consensus       108 l~~~l--~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGG  156 (183)
T d1l7da1         108 VLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTC
T ss_pred             HHHHH--HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCC
Confidence            32323  358999998742     2  237899999999999999876544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.25  E-value=1.9e-06  Score=64.96  Aligned_cols=99  Identities=21%  Similarity=0.266  Sum_probs=73.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +..+|+|+|+ |..|+.+++.|+.+|++|++.+.+.++++.+++.. ........+.      +.+.+..  ..+|+||.
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~------~~l~~~~--~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNS------AEIETAV--AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH------HHHHHHH--HTCSEEEE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhh------hhHHHhh--ccCcEEEE
Confidence            3468999999 99999999999999999999999999999887643 2222222221      1222222  25899999


Q ss_pred             CCCh-----h--hHHHHHhcccCCCEEEEEeccCCC
Q 019196          225 PVGG-----K--LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       225 ~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      |+--     +  ..++.++.|+++..++++....+.
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG  137 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGG  137 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeecCCCC
Confidence            8742     2  237899999999999999876543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.24  E-value=7.7e-06  Score=67.15  Aligned_cols=108  Identities=22%  Similarity=0.224  Sum_probs=74.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+ ++++.....-..+....+..+++.+..  ..+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            578999999999999999999999999999999998887655 567755444333322223333333322  22478999


Q ss_pred             EeCCChh--------------------------hHHHHHhccc-CCCEEEEEeccCCC
Q 019196          223 YDPVGGK--------------------------LTKESLKLLN-WGAQILVIGFASGE  253 (344)
Q Consensus       223 id~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~  253 (344)
                      ++++|..                          ..+.++..|+ .+|+++.++...+.
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~  142 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW  142 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh
Confidence            9999841                          1244555554 57999999866543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.20  E-value=7.5e-06  Score=66.82  Aligned_cols=183  Identities=18%  Similarity=0.227  Sum_probs=104.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+ ++++.... +..+ ..-.+.++++.+..  ..+++|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLN-VTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECC-TTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEE-ecCHHHhhhhhhhhhcccCCcce
Confidence            478999999999999999999999999999999998887765 45553322 2222 11222233333321  2357999


Q ss_pred             EEeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCCCCC--cchh-----------
Q 019196          222 LYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEIPV--IPAN-----------  260 (344)
Q Consensus       222 vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~--~~~~-----------  260 (344)
                      +++++|..                          ..+.++..|  +.+|+++.++...+....  ....           
T Consensus        82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS  161 (243)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence            99998741                          124455555  347999999855422111  1110           


Q ss_pred             -----hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCC---cceeEEE
Q 019196          261 -----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK---VIGKVMI  332 (344)
Q Consensus       261 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~---~~gkvvi  332 (344)
                           ++...++++.....+.....   ......++..+.+.+.   .+....-..+|+.++..+|.+..   ..|.+ |
T Consensus       162 ~~lA~ela~~gIrVN~I~PG~i~T~---~~~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~~s~~itGq~-i  234 (243)
T d1q7ba_         162 KSLAREVASRGITVNVVAPGFIETD---MTRALSDDQRAGILAQ---VPAGRLGGAQEIANAVAFLASDEAAYITGET-L  234 (243)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCH---HHHTSCHHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE-E
T ss_pred             HHHHHHhCccCeEEEEEecceEech---hhhhhhhhHHHHHHhc---CCCCCCCCHHHHHHHHHHHhCchhcCCcCCe-E
Confidence                 12456788887776544221   1111111111222211   11222336789999888887533   34443 4


Q ss_pred             EecC
Q 019196          333 AFDD  336 (344)
Q Consensus       333 ~~~~  336 (344)
                      .+|.
T Consensus       235 ~vdG  238 (243)
T d1q7ba_         235 HVNG  238 (243)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            4443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.12  E-value=8.3e-06  Score=66.73  Aligned_cols=106  Identities=23%  Similarity=0.258  Sum_probs=73.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+++.+... +..+-.+. +.++++.+..  ..+++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~Dv~~~-~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF-FQVDLEDE-RERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEE-EECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeE-EEEeCCCH-HHHHHHHHHHHHhcCCCCeEE
Confidence            5789999999999999999999999999999999988888778777543 33322222 2233333221  124799999


Q ss_pred             eCCChh--------------------------hHHHHHhcccC--CCEEEEEeccCCC
Q 019196          224 DPVGGK--------------------------LTKESLKLLNW--GAQILVIGFASGE  253 (344)
Q Consensus       224 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  253 (344)
                      +++|..                          ..+.++..|++  +|+++.++...+.
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~  139 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL  139 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc
Confidence            998741                          12445556644  6899998866543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.07  E-value=3.2e-05  Score=62.82  Aligned_cols=172  Identities=19%  Similarity=0.175  Sum_probs=101.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.+.++-+...|++|+++.++.++.+.+ ++++.+.....-+..-.+.++++.+..  ..+++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            578999999999999999999999999999999999877655 567754433222222222344433322  12469999


Q ss_pred             EeCCChh--------------------------hHHHHHhcccCCCEEEEEeccCCCCCCcchh----------------
Q 019196          223 YDPVGGK--------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPAN----------------  260 (344)
Q Consensus       223 id~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----------------  260 (344)
                      +++++..                          ..+..+..++..+.++..+............                
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~~lt~~lA  163 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLA  163 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHHHHHHHHH
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHHHHHHHHH
Confidence            9988741                          1244566788888877766544321100000                


Q ss_pred             -hhhccceEEEEEEeccccccCch-hHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 -IALVKNWTVHGLYWGSYKIHRPH-VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                       ++..+++++.....+......-. ...+..++..+   .-.    ....-..+|+.++..++.+.
T Consensus       164 ~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~---~~p----~~r~~~p~dva~~v~fL~S~  222 (241)
T d2a4ka1         164 LELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG---ASP----LGRAGRPEEVAQAALFLLSE  222 (241)
T ss_dssp             HHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHH---TST----TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHh---CCC----CCCCcCHHHHHHHHHHHhcc
Confidence             12455788887776654221100 11222232222   211    11222568899998888854

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.5e-05  Score=65.29  Aligned_cols=81  Identities=19%  Similarity=0.288  Sum_probs=58.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+.+ ++....+..+-. -.+.++++.+..  ...++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVT-QEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTT-SHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCC-CHHHHHHHHHHHHHhcCCCCEE
Confidence            57899999999999999999999999999999999988877754 443333333222 222234433322  12469999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++++|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99987

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.02  E-value=1.5e-05  Score=65.38  Aligned_cols=188  Identities=18%  Similarity=0.142  Sum_probs=105.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+ ++++.......-+..-.+.++++.+..  ..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            578999999999999999999999999999999998877655 566644322222222222233333322  12469999


Q ss_pred             EeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCCCCCcc-hh-------------
Q 019196          223 YDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEIPVIP-AN-------------  260 (344)
Q Consensus       223 id~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~-~~-------------  260 (344)
                      ++++|..                          ..+.++..+  +.+|+++.++...+...... ..             
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  163 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHH
Confidence            9998841                          013344333  34699999986654322111 11             


Q ss_pred             ----hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeee--chhhHHHHHHHHHcCC---cceeEE
Q 019196          261 ----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY--SPSEANLAFSAIEDRK---VIGKVM  331 (344)
Q Consensus       261 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~--~l~~~~ea~~~~~~~~---~~gkvv  331 (344)
                          ++-..++++.....+....       +.+.+...-..+......+..++  ..+|+.++..+|.+..   ..| .+
T Consensus       164 ~lA~e~a~~gIrVN~I~PG~v~T-------~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG-~~  235 (254)
T d1hdca_         164 LAAVELGTDRIRVNSVHPGMTYT-------PMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTG-AE  235 (254)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCC-------HHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCS-CE
T ss_pred             HHHHHhCCCceEEEEeeeCcccC-------ccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCC-ce
Confidence                1235567777776654321       11111110011111111222333  2578888888887533   344 34


Q ss_pred             EEecCCCCcC
Q 019196          332 IAFDDMKSIR  341 (344)
Q Consensus       332 i~~~~~~~~~  341 (344)
                      +.+|.--+..
T Consensus       236 i~vDGG~t~g  245 (254)
T d1hdca_         236 LAVDGGWTTG  245 (254)
T ss_dssp             EEESTTTTTS
T ss_pred             EEeCCCccCC
Confidence            5566544433

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=2.8e-05  Score=63.27  Aligned_cols=107  Identities=18%  Similarity=0.218  Sum_probs=71.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .|+.+||+||++++|...+..+...|++|++++++.++++.+    ++.|.... +..+-.+. +.+++..+..  ..+.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR-EDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH-HHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999887655    34554332 22322222 2233333322  2346


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhcccC--CCEEEEEeccCCC
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLLNW--GAQILVIGFASGE  253 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  253 (344)
                      .|++++|+|..                          ....++..|.+  .|+++.++...+.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  147 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc
Confidence            99999999851                          01344445544  5788888766544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=1.7e-05  Score=64.65  Aligned_cols=167  Identities=17%  Similarity=0.146  Sum_probs=97.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.++++.+...|++|+++++++++.+.+ ++++.....-.-+....+.++++.+..  ...++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            578999999999999999999999999999999999887665 455533222211222222233333221  12469999


Q ss_pred             EeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccCCCCCCcch---------------
Q 019196          223 YDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFASGEIPVIPA---------------  259 (344)
Q Consensus       223 id~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~---------------  259 (344)
                      ++++|..                          ..+.++..+.  .+|+++.++...+.......               
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk  164 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK  164 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHH
Confidence            9999841                          0133444443  46899999876543221111               


Q ss_pred             ---hhhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHc
Q 019196          260 ---NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIED  323 (344)
Q Consensus       260 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~  323 (344)
                         .++...++++.....+.......           +.+.+...+.+....-..+|+.++..+|.+
T Consensus       165 ~lA~el~~~gIrVN~I~PG~i~T~~~-----------~~~~~~~~~~pl~R~~~p~diA~~v~fL~s  220 (244)
T d1nffa_         165 STALELGPSGIRVNSIHPGLVKTPMT-----------DWVPEDIFQTALGRAAEPVEVSNLVVYLAS  220 (244)
T ss_dssp             HHHHHHGGGTEEEEEEEECCBCSGGG-----------TTSCTTCSCCSSSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHhcccCEEEEEEeeCCccChhH-----------hhhhHHHHhccccCCCCHHHHHHHHHHHhC
Confidence               12245567777766554321110           001111111222233457889888888874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.00  E-value=1.4e-05  Score=65.76  Aligned_cols=83  Identities=17%  Similarity=0.199  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+ +++|.....-.-+..-.+.++++.+..  ..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            478999999999999999999999999999999998877655 567755433222222222233333322  12479999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999884

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.7e-05  Score=64.64  Aligned_cols=80  Identities=25%  Similarity=0.307  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+ ++++....+..+-.+ .+.++++.+.  -+++|++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~--~g~iDilVn   82 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGD-WEATERALGS--VGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTT--CCCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCC-HHHHHHHHHH--hCCceEEEe
Confidence            678999999999999999999999999999999999887765 455544444333222 2334444433  247999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      ++|.
T Consensus        83 nAg~   86 (244)
T d1pr9a_          83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=1.9e-05  Score=64.32  Aligned_cols=80  Identities=26%  Similarity=0.270  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      .|+++||+|+++++|.++++.+...|++|+++++++++.+.+ ++++....+..+-.+. +.++++.+.  -+++|++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~--~g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGG--IGPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTT--CCCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHH--cCCCeEEEE
Confidence            478999999999999999999999999999999998887665 4554433443332222 234444432  357999999


Q ss_pred             CCCh
Q 019196          225 PVGG  228 (344)
Q Consensus       225 ~~g~  228 (344)
                      ++|.
T Consensus        81 nAg~   84 (242)
T d1cyda_          81 NAAL   84 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.8e-05  Score=65.74  Aligned_cols=103  Identities=20%  Similarity=0.331  Sum_probs=67.2

Q ss_pred             CCEE-EEecCCChHHHHHHHH-HHHcCCeEEEEecCHHHHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          147 GQVL-LVLGAAGGVGVAAVQI-GKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       147 ~~~v-lI~g~~g~~G~~~~~~-~~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      |++| ||+|+++|+|+++++. ++..|++|++++++.++.+.+    ++.+.. ..+..+-.+. +.++++.+..  ..+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~-~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL-QSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCH-HHHHHHHHHHHHhcC
Confidence            5566 8999999999998865 555689999999999887655    233433 2333322222 2233322221  124


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++|+++|++|..                          ..+.++..|++.|+++.++..
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            799999999841                          124566788899999988753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.97  E-value=4.1e-05  Score=62.88  Aligned_cols=83  Identities=17%  Similarity=0.231  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHH---hcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKA---RKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~---~~~~~  218 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+    ++.+.......-+....+.++++.+.   ..+..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            688999999999999999999999999999999998876654    34554443322222222223333221   22346


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      .|++++++|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999999885

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.96  E-value=1.4e-05  Score=66.56  Aligned_cols=82  Identities=22%  Similarity=0.314  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .|+++||+|+++++|.++++.+...|++|+++++++++++.+ ++++........+....+..+++....  ...++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            578999999999999999999999999999999999887665 456644332222222222233333221  12469999


Q ss_pred             EeCCC
Q 019196          223 YDPVG  227 (344)
Q Consensus       223 id~~g  227 (344)
                      ++++|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99987

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.95  E-value=4.7e-05  Score=61.84  Aligned_cols=81  Identities=21%  Similarity=0.262  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v  222 (344)
                      .++++||+|+++++|.+.++.+...|++|+++++++++.+.+. ++++.. +..+-.+. +.++++.+..  ..+++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~-~~~Dv~~~-~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-VVMDVADP-ASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEE-EECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeE-EEEecCCH-HHHHHHHHHHHHhcCCceEE
Confidence            4789999999999999999999999999999999998877664 455433 33322222 2233332221  12469999


Q ss_pred             EeCCCh
Q 019196          223 YDPVGG  228 (344)
Q Consensus       223 id~~g~  228 (344)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=2.4e-05  Score=64.23  Aligned_cols=83  Identities=20%  Similarity=0.337  Sum_probs=57.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+    ++.|.....-.-+..-.+.++++.+..  ..+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999998876554    345544332222222222233333221  12469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999999874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.95  E-value=4.3e-05  Score=62.78  Aligned_cols=175  Identities=18%  Similarity=0.170  Sum_probs=99.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHH---hcCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKA---RKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~---~~~~~  218 (344)
                      .|+++||+|+++++|.++++.+...|++|+++++++++.+.+    ++.|.......-+..-.+.++++.+.   ..+.+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            588999999999999999999999999999999998877655    23444333222222222223433322   12346


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCCCCCcc-hh---------
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEIPVIP-AN---------  260 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~-~~---------  260 (344)
                      +|++++++|..                          ..+.++..+  +.+|+++.++...+...... ..         
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  166 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMD  166 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHH
Confidence            99999998841                          013344445  45689999986554322111 11         


Q ss_pred             --------hhhccceEEEEEEeccccccCchhH--HHHHHHHH-HHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 --------IALVKNWTVHGLYWGSYKIHRPHVL--EDSLRELL-LWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 --------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                              ++-..++++.....+.......+..  ....++.+ ++.+.-    +....-..+|+.++..+|.+.
T Consensus       167 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~----pl~R~g~pedvA~~v~fL~S~  237 (259)
T d2ae2a_         167 QLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC----ALRRMGEPKELAAMVAFLCFP  237 (259)
T ss_dssp             HHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS----TTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCc
Confidence                    1235578888777655421100000  00111111 222221    122233578898888888753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.94  E-value=6.9e-05  Score=58.48  Aligned_cols=75  Identities=17%  Similarity=0.246  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-c----C-CcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----G-VDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~----g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      .++++||+|++|++|..+++.+...|++|++++++.++.+.+.+ +    . .....+..+.      .++.+..  .++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~--~~i   93 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD------ASRAEAV--KGA   93 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH------HHHHHHT--TTC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH------HHHHHHh--cCc
Confidence            78999999999999999999999999999999999988766532 2    2 2233444332      2233332  468


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++|+|+|.
T Consensus        94 Dilin~Ag~  102 (191)
T d1luaa1          94 HFVFTAGAI  102 (191)
T ss_dssp             SEEEECCCT
T ss_pred             CeeeecCcc
Confidence            999999874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.93  E-value=3.2e-05  Score=63.64  Aligned_cols=106  Identities=19%  Similarity=0.245  Sum_probs=69.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+++||+|+++++|.+++..+...|++|+++++++++.+.+    ++.|.+...-.-+..-.+.++++.+..  ..+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999998877655    334543322212222222233333221  12469


Q ss_pred             cEEEeCCChh---------------------------hHHHHHhcc--cCCCEEEEEeccC
Q 019196          220 DVLYDPVGGK---------------------------LTKESLKLL--NWGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~  251 (344)
                      |++++++|..                           ..+.++..|  +.+|+++.++...
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~  144 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMA  144 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechh
Confidence            9999998731                           013344444  5679999988654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.93  E-value=7.4e-05  Score=61.81  Aligned_cols=106  Identities=21%  Similarity=0.329  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.+ ..+    .+++.|.+......+....+.+++..+..  ..++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999887643 333    23455655444322322322233333221  1246


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|+++++.+..                          ..+.++..|.+.|+++.++...
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence            89999998741                          1355667888899998887543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.92  E-value=3.4e-05  Score=63.39  Aligned_cols=107  Identities=21%  Similarity=0.282  Sum_probs=68.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh---cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR---KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~---~~~~  218 (344)
                      .++++||+|+++++|.++++.+...|++|+++++++++.+.+.    +.+.......-+....+.++++.+..   .+..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999999999999988776552    23333222222222222234433322   1245


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccCC
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFASG  252 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~  252 (344)
                      +|++++++|..                          ..+.++..|+  .+|+++.++...+
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  148 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG  148 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence            99999998841                          0234444553  4689999886543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.92  E-value=4.6e-05  Score=62.65  Aligned_cols=105  Identities=21%  Similarity=0.311  Sum_probs=68.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHH----HHhcCCcEEE-eCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKF----LKSLGVDHVV-DLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~----~~~~g~~~v~-~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++.++. +..+.    +++.|.+... ..+-.+. +.+++..+..  ...
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP-SEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCH-HHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999876544 33333    3456654433 3332222 2222222211  124


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++|++++++|..                          ..+.++..|+++|.++.+....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            699999999851                          1255667888888888876543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.90  E-value=5.6e-05  Score=62.03  Aligned_cols=82  Identities=26%  Similarity=0.406  Sum_probs=56.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d  220 (344)
                      |+.+||+|+++++|.+.+..+...|++|+++++++++.+.+    ++.|.....-.-+..-.+.++++.+..  ..+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            56789999999999999999999999999999998876654    345544332222222222244443322  235799


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      ++++++|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999884

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.88  E-value=0.00072  Score=55.06  Aligned_cols=171  Identities=15%  Similarity=0.127  Sum_probs=97.1

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.++++..+.++    ..+....+..+-.+. +.++++.+..  ...
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD-EELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCH-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCH-HHHHHHHHHHHHhcC
Confidence            578999999976  8999999999999999999988866444442    334444444333322 2233332221  124


Q ss_pred             CccEEEeCCChh------------------------------hHHHHHhcccCCCEEEEEeccCCCCCCcch-h------
Q 019196          218 GVDVLYDPVGGK------------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPA-N------  260 (344)
Q Consensus       218 ~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~------  260 (344)
                      ++|+++++++..                              ..+.++..++++|+++.++........... .      
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  165 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKA  165 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHH
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHH
Confidence            699999998630                              012344577888999998865543221111 1      


Q ss_pred             -----------hhhccceEEEEEEeccccccCchh---HHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 -----------IALVKNWTVHGLYWGSYKIHRPHV---LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 -----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                                 ++-.+++++.....+.........   ..+..+...+...       ....-..+|+.++..+|.+.
T Consensus       166 al~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~p-------l~R~~~pedvA~~v~fL~S~  236 (256)
T d1ulua_         166 ALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP-------LRRNITQEEVGNLGLFLLSP  236 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHST-------TSSCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCC-------CCCCcCHHHHHHHHHHHhCc
Confidence                       124567888777665432211110   0122222222221       11233578999998888754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.85  E-value=5.1e-05  Score=62.03  Aligned_cols=173  Identities=18%  Similarity=0.169  Sum_probs=98.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .++.+||+|+++++|.+++..+...|++|+++++++++.+.+    ++.|.....-.-+..-.+.++++.+..  ..+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            478899999999999999999989999999999998876654    345544332222222222233333321  23579


Q ss_pred             cEEEeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCCCCC--cchh---------
Q 019196          220 DVLYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEIPV--IPAN---------  260 (344)
Q Consensus       220 d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~--~~~~---------  260 (344)
                      |+++++.|..                          ..+.++..|  +++|+++.++...+....  ....         
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  168 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG  168 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHH
Confidence            9999998741                          013344444  446999998854422111  1100         


Q ss_pred             -------hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcC
Q 019196          261 -------IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR  324 (344)
Q Consensus       261 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~  324 (344)
                             ++...++++.....+.......   ....++..+.+.+.   .+....-..+|+.++..+|.+.
T Consensus       169 ltr~lA~el~~~gIrVN~V~PG~v~T~~~---~~~~~~~~~~~~~~---~pl~R~~~pedvA~~v~fL~S~  233 (251)
T d2c07a1         169 FTKSLAKELASRNITVNAIAPGFISSDMT---DKISEQIKKNIISN---IPAGRMGTPEEVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhhhhCeEEEEEccCCEecccc---cccCHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHhCc
Confidence                   1245678888777655432111   11112222222221   1122233578888888887753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.84  E-value=2.3e-05  Score=62.21  Aligned_cols=111  Identities=18%  Similarity=0.277  Sum_probs=77.0

Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCC
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNE  201 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~  201 (344)
                      ++..+...|. . .+.+.++++++||.+|+  +.|+.++.+++..|.+|++++.+++-.+.+    +++|.+.+......
T Consensus        60 ~is~P~~~a~-m-l~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          60 TVSAPHMVAI-M-LEIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             EECCHHHHHH-H-HHHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             hhhhhhhHHH-H-HHhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            4445655555 2 37889999999999995  779999999988888899999987755544    45675543322111


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEE
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  247 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (344)
                      .. .      .......||.|+-+.+.+.. ...++.|+++|+++..
T Consensus       136 ~~-~------g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         136 GS-K------GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             GG-G------CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cc-c------CCcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            11 0      00123579999987766444 6688999999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.83  E-value=4e-05  Score=63.06  Aligned_cols=83  Identities=20%  Similarity=0.263  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+     ++.|.+...-.-+..-.+.++++.+..  ..++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999987765433     334544322222222222233333322  2357


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999873

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.83  E-value=7e-05  Score=62.72  Aligned_cols=82  Identities=15%  Similarity=0.259  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-----HhcCCcE-EEeCCCCCchhhHHHHHHH--hcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-----KSLGVDH-VVDLSNESVIPSVKEFLKA--RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-----~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~~  217 (344)
                      .|+++||+|+++++|.+++..+...|++|++++++.++.+.+     ++.|... .+..+-.+. +.+++....  ....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~-~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP-DMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH-HHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccCh-HHHHHHhhhhhhhcc
Confidence            468999999999999999999999999999999998775543     2334333 333332222 223332221  2345


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999884

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=5.8e-05  Score=61.77  Aligned_cols=106  Identities=23%  Similarity=0.266  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hc-----CCcEE-EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVDHV-VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~v-~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+. ++     +.... +..+- .-.+.++++.+..  ..
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeec-CCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999988766553 22     12222 22222 2222233333322  12


Q ss_pred             CCccEEEeCCChh------------------hHHHHHhcccC-----CCEEEEEeccCC
Q 019196          217 KGVDVLYDPVGGK------------------LTKESLKLLNW-----GAQILVIGFASG  252 (344)
Q Consensus       217 ~~~d~vid~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~  252 (344)
                      +++|++++++|..                  ....++..|++     +|+++.++...+
T Consensus        81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence            4799999999851                  11334444433     488999886553

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.78  E-value=0.00025  Score=58.15  Aligned_cols=99  Identities=16%  Similarity=0.281  Sum_probs=71.6

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHH----hcCCc--EEEeCCCCCchhhHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEF  210 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~  210 (344)
                      ...++++||++||=.|+  |.|.++..+|+..+  ++|++++.+++..+.++    .+|..  ..+...+  ...     
T Consensus        96 i~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~~~-----  166 (266)
T d1o54a_          96 AMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--ISE-----  166 (266)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GGG-----
T ss_pred             HHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--ccc-----
Confidence            47889999999999996  55888889999874  69999999999887774    34532  2222222  210     


Q ss_pred             HHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          211 LKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                        ......+|.|+--.+.  ..++.+.+.|+|+|+++.+.
T Consensus       167 --~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 --GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             --CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             --cccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence              1234568988766654  46789999999999998753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.77  E-value=4.7e-05  Score=61.61  Aligned_cols=101  Identities=19%  Similarity=0.180  Sum_probs=66.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh----HHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS----VKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~~~~~~~~~~d~  221 (344)
                      .+++|||+|+++++|.+.++.+...|++|+++++++.+..      .............+.    ...+.......++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999999999999999999999999999887654211      111221111111111    222223334557999


Q ss_pred             EEeCCCh----h-----------------------hHHHHHhcccCCCEEEEEeccCC
Q 019196          222 LYDPVGG----K-----------------------LTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       222 vid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      +++++|.    .                       ....++..++++|+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            9999873    1                       02445567899999999986653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.76  E-value=9e-05  Score=56.40  Aligned_cols=71  Identities=21%  Similarity=0.301  Sum_probs=55.1

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      +..++.++++|||+|+ |+.+.+++..++..|+ +++++.|+.++.+.+. .++... ++..               ...
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~---------------~~~   72 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSL---------------ENQ   72 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCC---------------TTC
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhcc---------------ccc
Confidence            5666778889999999 9999999999999998 7999999999877664 455432 2211               113


Q ss_pred             CccEEEeCCC
Q 019196          218 GVDVLYDPVG  227 (344)
Q Consensus       218 ~~d~vid~~g  227 (344)
                      .+|+++||++
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            6899999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.76  E-value=5e-05  Score=62.43  Aligned_cols=83  Identities=18%  Similarity=0.300  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH-HHH----HHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++.++.+ +.+    .+++.|.+...-.-+..-.+.++++.+..  ..++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999998754 333    23455644332212222222233333221  1247


Q ss_pred             ccEEEeCCCh
Q 019196          219 VDVLYDPVGG  228 (344)
Q Consensus       219 ~d~vid~~g~  228 (344)
                      +|++++++|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.76  E-value=0.00012  Score=59.81  Aligned_cols=81  Identities=23%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      +.+||+|+++++|.+.+..+...|++|+++++++++.+.+    ++.|.+...-.-+..-.+.++++.+..  ..+++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            3469999999999999999988999999999998876654    344544322212222222233333322  2347999


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      +++++|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7.2e-05  Score=61.30  Aligned_cols=80  Identities=33%  Similarity=0.459  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH----HhcCC--cEE-E--eCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGV--DHV-V--DLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~--~~v-~--~~~~~~~~~~~~~~~~~~--  214 (344)
                      +++++||+|+++++|.+.+..+...|++|+++.++.++.+.+    ++.+.  ... +  |..++   +.++++.+..  
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~---~~v~~~v~~~~~   85 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE---EDILSMFSAIRS   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH---HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCH---HHHHHHHHHHHH
Confidence            478999999999999999999999999999999998876655    33332  222 2  23322   2233332221  


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                      ..+++|++++++|.
T Consensus        86 ~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          86 QHSGVDICINNAGL   99 (257)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hcCCCCEEEecccc
Confidence            12469999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.75  E-value=6.1e-05  Score=61.39  Aligned_cols=107  Identities=19%  Similarity=0.153  Sum_probs=69.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH--HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      .++.+||+|+++++|.++++.+...|++|+++++++++  .+.+++.|.....-.-+..-.+.++++.+..  ..+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999987543  2344567754333222222222233333322  1247999


Q ss_pred             EEeCCChh-----------h---------------HHHHHhccc--CCCEEEEEeccCC
Q 019196          222 LYDPVGGK-----------L---------------TKESLKLLN--WGAQILVIGFASG  252 (344)
Q Consensus       222 vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  252 (344)
                      +++++|..           .               .+.++..|+  .+|+++.++...+
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            99998841           1               134444553  3589999886654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.75  E-value=9.2e-05  Score=60.43  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC--Cc-EEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VD-HVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+. +++  .. ..+..+-.+. +.++++.+..  ..+++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE-DGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCH-HHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCH-HHHHHHHHHHHHHhCCc
Confidence            4789999999999999999999999999999999988777663 333  12 2232222221 2233332221  12479


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999999884

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.75  E-value=9.6e-05  Score=60.57  Aligned_cols=131  Identities=15%  Similarity=0.177  Sum_probs=80.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hc--CCcEE-EeCCCCCchhhHHHHHHHh--cC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SL--GVDHV-VDLSNESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~--g~~~v-~~~~~~~~~~~~~~~~~~~--~~  216 (344)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+.    +.  +.... +..+-.+ .+.++++.+..  ..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999988766542    22  22222 2222111 12233333222  12


Q ss_pred             CCccEEEeCCCh--h-------------------------hHHHHHhccc--CCCEEEEEeccCCCCCCcc-hh------
Q 019196          217 KGVDVLYDPVGG--K-------------------------LTKESLKLLN--WGAQILVIGFASGEIPVIP-AN------  260 (344)
Q Consensus       217 ~~~d~vid~~g~--~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~-~~------  260 (344)
                      +++|++++++|.  .                         ..+.++..++  .+|+++.++...+...... ..      
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  161 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH  161 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence            469999999873  1                         0133444443  5789999886654322111 11      


Q ss_pred             -----------hhhccceEEEEEEeccc
Q 019196          261 -----------IALVKNWTVHGLYWGSY  277 (344)
Q Consensus       261 -----------~~~~~~~~~~~~~~~~~  277 (344)
                                 ++-..++++.....+..
T Consensus       162 al~~lt~~lA~el~~~gIrVN~i~PG~v  189 (258)
T d1iy8a_         162 GVVGLTRNSAVEYGRYGIRINAIAPGAI  189 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred             HHHHHHHHHHHHhCccCceEEEEeeCcc
Confidence                       12355788887776554

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=0.0001  Score=56.22  Aligned_cols=80  Identities=13%  Similarity=0.181  Sum_probs=55.9

Q ss_pred             HHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC---CcEEEeCCCCCchhhHHHHH
Q 019196          136 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       136 ~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~  211 (344)
                      .+|.+..-..++++|||+|+ ||.+.+++..+..+|++|+++.|+.+|.+.+. .+.   ........+           
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----------   74 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----------   74 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----------
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----------
Confidence            34544333457889999999 99999999999999999999999998876653 333   111211111           


Q ss_pred             HHhcCCCccEEEeCCChh
Q 019196          212 KARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~  229 (344)
                        .....+|+++||++..
T Consensus        75 --~~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          75 --LEGHEFDLIINATSSG   90 (170)
T ss_dssp             --GTTCCCSEEEECCSCG
T ss_pred             --ccccccceeecccccC
Confidence              1235689999999743

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=6.5e-05  Score=61.12  Aligned_cols=80  Identities=24%  Similarity=0.287  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++++++++.+.+.+.......- .+....+..+......  .+.|+++++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~--~~id~lVn~   81 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV-LDVTKKKQIDQFANEV--ERLDVLFNV   81 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEE-CCTTCHHHHHHHHHHC--SCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceee-eecccccccccccccc--ccceeEEec
Confidence            5789999999999999999999999999999999988877765543322222 2333333344444333  479999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      .|.
T Consensus        82 ag~   84 (245)
T d2ag5a1          82 AGF   84 (245)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.72  E-value=0.00011  Score=60.66  Aligned_cols=81  Identities=20%  Similarity=0.361  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV  219 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~  219 (344)
                      .|+.+||+|+++++|.+.++.+...|++|++++++.++.+.+. +++   ....+..+-.+ .+.++++.+..  ..+++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999999999988877653 443   22233332222 22233333221  12479


Q ss_pred             cEEEeCCC
Q 019196          220 DVLYDPVG  227 (344)
Q Consensus       220 d~vid~~g  227 (344)
                      |++++++|
T Consensus        84 D~lVnnAG   91 (268)
T d2bgka1          84 DIMFGNVG   91 (268)
T ss_dssp             CEEEECCC
T ss_pred             ceeccccc
Confidence            99999987

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.72  E-value=3.1e-05  Score=63.36  Aligned_cols=82  Identities=29%  Similarity=0.276  Sum_probs=55.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcC-Cc-EEEeCCCCCc---hhhHHHHHHHhcCCCc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLG-VD-HVVDLSNESV---IPSVKEFLKARKLKGV  219 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~---~~~~~~~~~~~~~~~~  219 (344)
                      .++|||+||++++|.++++.+...|+  +|+.++++.++.+.+++.. .. ..+..+-.+.   .+..+.+.+..+..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999988887886  6888999998888777643 22 2232222221   1122233333334469


Q ss_pred             cEEEeCCCh
Q 019196          220 DVLYDPVGG  228 (344)
Q Consensus       220 d~vid~~g~  228 (344)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999983

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=0.00012  Score=61.31  Aligned_cols=83  Identities=25%  Similarity=0.341  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-Hhc--------CCcEEEeCCCCCchhhHHHHHHHh--
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL--------GVDHVVDLSNESVIPSVKEFLKAR--  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--------g~~~v~~~~~~~~~~~~~~~~~~~--  214 (344)
                      .|+++||+|+++++|.++++.+...|++|++++++.++.+.+ +++        +.......-+..-.+.++++.+..  
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998876544 222        222222112222222233333321  


Q ss_pred             cCCCccEEEeCCCh
Q 019196          215 KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 ~~~~~d~vid~~g~  228 (344)
                      ..+++|++++++|.
T Consensus        91 ~~G~iDiLVnnAg~  104 (297)
T d1yxma1          91 TFGKINFLVNNGGG  104 (297)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeEEEEeeccc
Confidence            12469999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.71  E-value=4.5e-05  Score=62.48  Aligned_cols=107  Identities=20%  Similarity=0.197  Sum_probs=66.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC-cE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DH-VVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~-~~-v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .+++|||+|+++++|..++..+...|++|+++.++.++.+.+++    .+. .. .+..+.....+.++++....  ..+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999998877665443422    222 22 22223221212222222211  124


Q ss_pred             CccEEEeCCChh---h---------------HHHHHhccc-----CCCEEEEEeccCC
Q 019196          218 GVDVLYDPVGGK---L---------------TKESLKLLN-----WGAQILVIGFASG  252 (344)
Q Consensus       218 ~~d~vid~~g~~---~---------------~~~~~~~l~-----~~G~~v~~g~~~~  252 (344)
                      ++|++++++|..   .               ...++..|.     ++|+++.++...+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~  141 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG  141 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh
Confidence            799999999851   1               133444442     3588988876554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.69  E-value=0.00012  Score=60.00  Aligned_cols=108  Identities=23%  Similarity=0.304  Sum_probs=69.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH-HHHHHH-----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFL-----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~-----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~  217 (344)
                      .|+++||+|+++++|.+.++.+...|++|+++.+++ ++.+.+     +..|.......-+..-.+.++++.+..  ..+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999864 444333     233544433222322223334433322  124


Q ss_pred             CccEEEeCCChh--------------------------hHHHHHhcccC--CCEEEEEeccCCC
Q 019196          218 GVDVLYDPVGGK--------------------------LTKESLKLLNW--GAQILVIGFASGE  253 (344)
Q Consensus       218 ~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~  253 (344)
                      ++|++++++|..                          ..+.++..|++  +|+++.++...+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            699999998841                          12344555543  6899998866543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.69  E-value=0.00011  Score=59.20  Aligned_cols=99  Identities=19%  Similarity=0.244  Sum_probs=65.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhh----HHHHHHHhcCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS----VKEFLKARKLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~~~~~~~~~~~~~d~v  222 (344)
                      +.+|||+|+++++|.+.++.+...|++|+++++++++..      ........+.+..+.    ...+.......++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357999999999999999999999999999998765321      111221122222111    2222223345679999


Q ss_pred             EeCCCh----h-----------------------hHHHHHhcccCCCEEEEEeccC
Q 019196          223 YDPVGG----K-----------------------LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       223 id~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++++|.    .                       .....+..|+++|+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence            999873    1                       0244566888999999998654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=0.00012  Score=60.40  Aligned_cols=108  Identities=21%  Similarity=0.268  Sum_probs=69.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-----cCCcEEEeCCCCCchhhHHHHHHHh--cCCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDHVVDLSNESVIPSVKEFLKAR--KLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~  218 (344)
                      .|+++||+||++|+|.+++..+...|++|++++++.++++.+.+     .+........+.+............  ..+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988776632     2332222222222222222222211  2346


Q ss_pred             ccEEEeCCChh--------------------------hHHHHHhccc-CCCEEEEEeccCCC
Q 019196          219 VDVLYDPVGGK--------------------------LTKESLKLLN-WGAQILVIGFASGE  253 (344)
Q Consensus       219 ~d~vid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~  253 (344)
                      .|+++++.|..                          ....++..|+ .+|+++.++...+.
T Consensus        93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~  154 (269)
T d1xu9a_          93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK  154 (269)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred             ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc
Confidence            89999887641                          0133333443 47899998876654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00016  Score=58.25  Aligned_cols=74  Identities=28%  Similarity=0.331  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +++++||+|+++++|.++++.+...|++|+++++++++.   ++.+... +..+-.+.   ++.+.+..  +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~~~~~~~-~~~Dv~~~---~~~~~~~~--g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRY-VVCDLRKD---LDLLFEKV--KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEE-EECCTTTC---HHHHHHHS--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HhcCCcE-EEcchHHH---HHHHHHHh--CCCcEEEec
Confidence            478999999999999999999999999999999987644   4444332 22222222   45555444  469999999


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.68  E-value=0.00026  Score=53.22  Aligned_cols=72  Identities=21%  Similarity=0.344  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      -.+++|||+|+ |.+|.++++.+...|+ +++++.++.++.+ +++++|.. +..+++      ..+.+     ..+|+|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~------~~~~l-----~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE------LVDHL-----ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG------HHHHH-----HTCSEE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh------HHHHh-----ccCCEE
Confidence            36789999999 9999999999999998 6999999987765 55677743 322211      22221     369999


Q ss_pred             EeCCChh
Q 019196          223 YDPVGGK  229 (344)
Q Consensus       223 id~~g~~  229 (344)
                      |.|++.+
T Consensus        89 i~atss~   95 (159)
T d1gpja2          89 VSATAAP   95 (159)
T ss_dssp             EECCSSS
T ss_pred             EEecCCC
Confidence            9999863

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.67  E-value=0.00018  Score=58.41  Aligned_cols=168  Identities=17%  Similarity=0.145  Sum_probs=93.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEec-CHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDV  221 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~  221 (344)
                      -+||+|+++++|.+.++.+...|++|++++. ++++.+.+    ++.|.+...-.-+....+.++++.+..  ..+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            5799999999999999999999999988754 55544433    345543322212222222233333322  2357999


Q ss_pred             EEeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCCCCC--cchh-----------
Q 019196          222 LYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGEIPV--IPAN-----------  260 (344)
Q Consensus       222 vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~--~~~~-----------  260 (344)
                      +++++|..                          ..+.++..|  +.+|+++.++...+....  ....           
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~lt  162 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFS  162 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHCh
Confidence            99998841                          124455555  457999998865432111  1100           


Q ss_pred             -----hhhccceEEEEEEeccccccCchhHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHH
Q 019196          261 -----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE  322 (344)
Q Consensus       261 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~  322 (344)
                           ++-..++++.....+.....   ......++..+.+.+.   .+....-..+|+.++..+|.
T Consensus       163 k~lA~el~~~gIrvN~I~PG~i~T~---~~~~~~~~~~~~~~~~---~pl~R~~~p~dvA~~v~fLa  223 (244)
T d1edoa_         163 KTAAREGASRNINVNVVCPGFIASD---MTAKLGEDMEKKILGT---IPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHTTTEEEEEEEECSBCSH---HHHTTCHHHHHHHHTS---CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhCcEEEEEecceeccH---HHHHhhHHHHHHHHhc---CCCCCCcCHHHHHHHHHHHH
Confidence                 12355788887776543211   1111111222222221   11222345789999988874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.66  E-value=8.4e-05  Score=61.47  Aligned_cols=82  Identities=18%  Similarity=0.353  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc----EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD----HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++++.+.    +.+..    ..+..+-.+ .+.++++.+..  .
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999988776553    23321    122222222 12233333222  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      .+++|++++++|.
T Consensus        83 ~g~iDilvnnAG~   95 (272)
T d1xkqa_          83 FGKIDVLVNNAGA   95 (272)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCceEEEeCCcc
Confidence            2469999999773

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.65  E-value=0.00015  Score=59.60  Aligned_cols=82  Identities=23%  Similarity=0.358  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc----EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD----HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .++.+||+|+++++|.+.++.+...|++|++++++.++.+.+.    +.+..    ..+..+-. ..+.++++.+..  .
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt-~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT-TDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCC-CHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999988776553    23321    22222221 122233333322  1


Q ss_pred             CCCccEEEeCCCh
Q 019196          216 LKGVDVLYDPVGG  228 (344)
Q Consensus       216 ~~~~d~vid~~g~  228 (344)
                      .+++|++++++|.
T Consensus        83 ~g~iDilvnnAG~   95 (264)
T d1spxa_          83 FGKLDILVNNAGA   95 (264)
T ss_dssp             HSCCCEEEECCC-
T ss_pred             hCCCCEeeccccc
Confidence            2479999999873

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.64  E-value=0.00012  Score=60.47  Aligned_cols=81  Identities=22%  Similarity=0.402  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc----EEEeCCCCCchhhHHHHHHHh--c
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD----HVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~----~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.++.+.+.    +.+..    ..+..+-.+ .+.++++.+..  .
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999988776552    33321    122222222 12233333222  1


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      .+++|++++++|
T Consensus        82 ~G~iDilVnnAG   93 (274)
T d1xhla_          82 FGKIDILVNNAG   93 (274)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCceEEEeecc
Confidence            247999999987

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.61  E-value=0.00027  Score=57.15  Aligned_cols=105  Identities=19%  Similarity=0.261  Sum_probs=66.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-------EEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--c
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGAT-------IIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--K  215 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~-------v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~  215 (344)
                      -|||+|+++++|.+.+..+...|++       |+..+++.++.+.+    ++.|.....-.-+..-.+.++++.+..  .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3799999999999999988888887       88899998876655    234543222111222222233333221  2


Q ss_pred             CCCccEEEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccCCC
Q 019196          216 LKGVDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFASGE  253 (344)
Q Consensus       216 ~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~  253 (344)
                      .+++|++++++|..                          ..+.++..|+  .+|+++.++...+.
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence            34799999998841                          1244555664  46899998865543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.56  E-value=0.00037  Score=52.70  Aligned_cols=85  Identities=16%  Similarity=0.121  Sum_probs=63.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|.|.|. |.+|...+..++..|.+|++.++++++.+.+++.|. +...+.  .+.            -...|+||-|+.
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~--~~~------------~~~~DiIilavp   66 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD--LSL------------LQTAKIIFLCTP   66 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC--GGG------------GTTCSEEEECSC
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee--ccc------------ccccccccccCc
Confidence            5889999 999999998889999999999999999999988884 333221  111            146899999998


Q ss_pred             hhh----HHHHHhcccCCCEEEEEe
Q 019196          228 GKL----TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~~~----~~~~~~~l~~~G~~v~~g  248 (344)
                      ...    +++....++++-.++.++
T Consensus        67 ~~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          67 IQLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             Hhhhhhhhhhhhhhcccccceeecc
Confidence            643    455556667777776665

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.51  E-value=0.00027  Score=55.93  Aligned_cols=105  Identities=21%  Similarity=0.327  Sum_probs=72.2

Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCCcEEE-eCCC-C
Q 019196          130 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVV-DLSN-E  201 (344)
Q Consensus       130 ~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~v~-~~~~-~  201 (344)
                      +...|.  +.+.+.++++++||-+|+  +.|..++.+++..|  .+|++++.+++..+.+++    .+.+.+. ...+ .
T Consensus        61 P~~~a~--~l~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~  136 (213)
T d1dl5a1          61 PSLMAL--FMEWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY  136 (213)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred             chhhHH--HHHhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchH
Confidence            444444  347888999999999996  55888889998875  489999999887777653    3433222 1111 1


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEE
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  247 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (344)
                      ..   .      .....||.|+.+.+-+.+ +..++.|+|+|+++..
T Consensus       137 ~~---~------~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         137 YG---V------PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GC---C------GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             Hc---c------ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            10   0      122469999987765443 6688999999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.50  E-value=0.00039  Score=58.14  Aligned_cols=104  Identities=24%  Similarity=0.290  Sum_probs=68.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH---------HHHHHH----HhcCCcEEEeCCCCCchh-hHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------EKIKFL----KSLGVDHVVDLSNESVIP-SVKEFL  211 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~---------~~~~~~----~~~g~~~v~~~~~~~~~~-~~~~~~  211 (344)
                      .|+++||+|+++++|.+.++.+...|++|++++++.         ++.+.+    ...+.....+..+.+..+ .++++.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            478999999999999999999999999999986542         222222    234455566665544422 222222


Q ss_pred             HHhcCCCccEEEeCCChh--------------------------hHHHHHhccc--CCCEEEEEeccC
Q 019196          212 KARKLKGVDVLYDPVGGK--------------------------LTKESLKLLN--WGAQILVIGFAS  251 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~  251 (344)
                      +.  .+++|++++++|..                          ..+.++..|+  .+|++|.++...
T Consensus        86 ~~--~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~  151 (302)
T d1gz6a_          86 DT--FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS  151 (302)
T ss_dssp             HH--TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             HH--cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChh
Confidence            22  35799999998841                          1244555553  468999988654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.45  E-value=0.00017  Score=58.65  Aligned_cols=81  Identities=22%  Similarity=0.344  Sum_probs=51.8

Q ss_pred             CEEEEecCCChHHHHHHHHHH---HcCCeEEEEecCHHHHHHHHh---cCCc-EEEe--CCCCCchhh-HHHHHHHhcCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGK---VCGATIIAVARGAEKIKFLKS---LGVD-HVVD--LSNESVIPS-VKEFLKARKLK  217 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~---~~g~~v~~~~~~~~~~~~~~~---~g~~-~v~~--~~~~~~~~~-~~~~~~~~~~~  217 (344)
                      ++|||+|+++++|.++++.+-   ..|++|+++++++++.+.+++   .+.. .++.  ..+.+-.+. .+.+.......
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            589999999999999887653   358899999999887655543   2222 2333  333322111 22222233445


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|++++++|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999999873

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.43  E-value=0.00086  Score=48.52  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=57.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|+|.|+ |.+|..+++.+...|.+|++++.++++.+.+.+ ++.. ++..+..+     .+.++..+-..+|.++-+++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~-----~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTK-----IKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTS-----HHHHHHTTTTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccc-----hhhhhhcChhhhhhhcccCC
Confidence            5899999 999999999999999999999999999887764 5543 44443332     23444455567999999988


Q ss_pred             hhh
Q 019196          228 GKL  230 (344)
Q Consensus       228 ~~~  230 (344)
                      .+.
T Consensus        75 ~d~   77 (132)
T d1lssa_          75 KEE   77 (132)
T ss_dssp             CHH
T ss_pred             cHH
Confidence            753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.41  E-value=0.00055  Score=52.07  Aligned_cols=79  Identities=22%  Similarity=0.228  Sum_probs=54.1

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcC---CcEEEeCCCCCchhhHHHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG---VDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      ++.+.....++++|+|+|+ |+.+.+++..+...+.+|+++.|+.++.+.+ +.++   .......+..           
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-----------   75 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-----------   75 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----------
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-----------
Confidence            4433333347889999999 9999999988887777999999999887655 3333   2222222221           


Q ss_pred             HhcCCCccEEEeCCChh
Q 019196          213 ARKLKGVDVLYDPVGGK  229 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~  229 (344)
                        .-..+|+++||++..
T Consensus        76 --~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 --PLQTYDLVINATSAG   90 (171)
T ss_dssp             --CCSCCSEEEECCCC-
T ss_pred             --cccccceeeeccccc
Confidence              124699999999853

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.40  E-value=0.00075  Score=55.00  Aligned_cols=86  Identities=22%  Similarity=0.307  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHH-------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEK-------IKFLKSLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      .++|+.++||+|+++++|+..+..+...|+ +|+.+.++..+       .+.++..|....+..-+....+...++....
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            478999999999999999999998888899 57777765321       2233455654333222222223344444432


Q ss_pred             -cCCCccEEEeCCCh
Q 019196          215 -KLKGVDVLYDPVGG  228 (344)
Q Consensus       215 -~~~~~d~vid~~g~  228 (344)
                       ...++|.++++.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence             23468999999884

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.40  E-value=0.00013  Score=59.51  Aligned_cols=180  Identities=12%  Similarity=0.011  Sum_probs=101.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCC--cEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++||+|+++++|++.+..+...|++|++.+++.++.+.++..+.  ...-..+..+..+.++++.+..  +++|+++++
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~--G~iDiLVnN   78 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY--GQVDVLVSN   78 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH--SCCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc--CCCCEEEEC
Confidence            378999999999999999999999999999998887776654321  0111123334333344444433  469999987


Q ss_pred             CCh--h----------h---------------HHHHHhccc--CCCEEEEEeccCCCCCCcc-hh---------------
Q 019196          226 VGG--K----------L---------------TKESLKLLN--WGAQILVIGFASGEIPVIP-AN---------------  260 (344)
Q Consensus       226 ~g~--~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~-~~---------------  260 (344)
                      +|.  .          .               .+.++..|+  .+|+++.++...+...... ..               
T Consensus        79 Ag~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  158 (252)
T d1zmta1          79 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANAL  158 (252)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHH
Confidence            653  1          0               133444453  3699999987654322111 11               


Q ss_pred             --hhhccceEEEEEEecccccc-----Cchh----HHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCCc---
Q 019196          261 --IALVKNWTVHGLYWGSYKIH-----RPHV----LEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKV---  326 (344)
Q Consensus       261 --~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~~---  326 (344)
                        ++-.+++++.....+.....     .+..    .++..+.+.+.+.       ....-..+|+.++..+|.+...   
T Consensus       159 A~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~p-------l~R~g~pedvA~~v~fL~S~~s~~i  231 (252)
T d1zmta1         159 SKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA-------LQRLGTQKELGELVAFLASGSCDYL  231 (252)
T ss_dssp             HHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS-------SSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCC-------CCCCcCHHHHHHHHHHHhCchhcCC
Confidence              12455677777776543211     1111    1122222222221       1122357889888888875432   


Q ss_pred             ceeEEEEecCC
Q 019196          327 IGKVMIAFDDM  337 (344)
Q Consensus       327 ~gkvvi~~~~~  337 (344)
                      .|. +|.+|.-
T Consensus       232 TG~-~i~vdGG  241 (252)
T d1zmta1         232 TGQ-VFWLAGG  241 (252)
T ss_dssp             TTC-EEEESTT
T ss_pred             cCC-eEEECCC
Confidence            333 4555543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.40  E-value=0.00071  Score=53.73  Aligned_cols=108  Identities=13%  Similarity=0.142  Sum_probs=73.1

Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-C-Cc--EEEeCCCC
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-G-VD--HVVDLSNE  201 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g-~~--~v~~~~~~  201 (344)
                      ++..+...|.  +.+...++++++||-+|+  |.|..++.+++. +.+|+.++.+++..+.+++. . ..  .+...+..
T Consensus        52 ~~~~p~~~a~--ml~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~  126 (224)
T d1vbfa_          52 NTTALNLGIF--MLDELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT  126 (224)
T ss_dssp             EECCHHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG
T ss_pred             ceehhhhHHH--HHHHhhhcccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchh
Confidence            3444555554  347889999999999996  578888877775 67999999999877777653 1 11  12222111


Q ss_pred             -CchhhHHHHHHHhcCCCccEEEeCCChhh-HHHHHhcccCCCEEEEEe
Q 019196          202 -SVIPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       202 -~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (344)
                       .+          .....||.|+-+.+.+. -...++.|+++|+++..-
T Consensus       127 ~g~----------~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         127 LGY----------EEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             GCC----------GGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hcc----------hhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEE
Confidence             11          11246999987766543 366789999999998753

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.39  E-value=0.00068  Score=56.20  Aligned_cols=101  Identities=14%  Similarity=0.103  Sum_probs=70.2

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      -+.+.+++++|++||=+|+  |.|-.+..+|+..|++|++++.++++.+.++    +.|....+.....++.        
T Consensus        52 ~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~--------  121 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE--------  121 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGG--------
T ss_pred             HHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccc--------
Confidence            3458889999999999996  6777888999999999999999998766653    4453322222222220        


Q ss_pred             HhcCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g  248 (344)
                       .....||.|+..-.-                ..++.+.++|+|+|+++.-.
T Consensus       122 -~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 -EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             -GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             -ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence             123569988642221                23577889999999998644

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.33  E-value=0.0003  Score=56.98  Aligned_cols=100  Identities=16%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cC-CcEEEeCCCCCchhhHHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LG-VDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~~~  211 (344)
                      ...++++||++||=.|+  |.|.++..+|+..|  .+|++++.+++..+.+++    ++ .+.+ .....+..+      
T Consensus        78 i~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~~------  148 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIAD------  148 (250)
T ss_dssp             ---CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTT------
T ss_pred             HHHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeeec------
Confidence            36788999999999986  55888888888764  489999999988887753    22 2221 111112211      


Q ss_pred             HHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          212 KARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ......||.|+--...  ..+..+.+.|+|+|+++.+.
T Consensus       149 -~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         149 -FISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             -ccccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence             1134579999855554  47789999999999998754

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0011  Score=53.43  Aligned_cols=102  Identities=19%  Similarity=0.121  Sum_probs=71.4

Q ss_pred             HHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHH
Q 019196          136 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVK  208 (344)
Q Consensus       136 ~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~  208 (344)
                      ..|....+++|+++||=+|+  |.|..+..+++..|++|++++.+++..+.+++    .|..   .....+-.+.     
T Consensus        23 ~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-----   95 (245)
T d1nkva_          23 ATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-----   95 (245)
T ss_dssp             HHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-----
T ss_pred             HHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-----
Confidence            34557889999999999996  56777888888889999999999887766643    4532   2222222211     


Q ss_pred             HHHHHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          209 EFLKARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                           .....||+|+-.-.-       ..+..+.+.|+|+|+++....
T Consensus        96 -----~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~~  138 (245)
T d1nkva_          96 -----VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP  138 (245)
T ss_dssp             -----CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred             -----cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEec
Confidence                 134579999753221       356778899999999987543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.30  E-value=0.0017  Score=49.65  Aligned_cols=93  Identities=19%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCC------CCCchhhHHHHHHHhcCCCcc
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS------NESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~------~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ++++.|+|+ |.+|++.+..+...|.+|++.++++++.+.+++.+........      .........+..     ..+|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            368999999 9999999999999999999999999988888776532221100      000000122221     4689


Q ss_pred             EEEeCCChhhH----HHHHhcccCCCEEE
Q 019196          221 VLYDPVGGKLT----KESLKLLNWGAQIL  245 (344)
Q Consensus       221 ~vid~~g~~~~----~~~~~~l~~~G~~v  245 (344)
                      ++|-|+.....    ++....+.++-.++
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEGQLII  103 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTTCEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCCCEEE
Confidence            99999987544    44556666666554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.29  E-value=0.0013  Score=50.03  Aligned_cols=95  Identities=12%  Similarity=0.045  Sum_probs=62.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +++|||+|+ |.+|..+++.+...|.+|++++++.++.+.+.+-..................+.   .  ...|.++.++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~---i--~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE---V--AKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHH---H--TTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhh---h--hccceeEeec
Confidence            579999999 999999999998889999999999998887765333333333333331112221   1  3578888888


Q ss_pred             ChhhH-HHHHhcccCCCEEEEE
Q 019196          227 GGKLT-KESLKLLNWGAQILVI  247 (344)
Q Consensus       227 g~~~~-~~~~~~l~~~G~~v~~  247 (344)
                      +.... .....+.+.+-.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          76 PYTFHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             CGGGHHHHHHHHHHHTCEEECS
T ss_pred             cchhhhHHHHHHHhhccceeec
Confidence            76433 3344555555555554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00029  Score=55.33  Aligned_cols=96  Identities=14%  Similarity=0.179  Sum_probs=63.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      .++|+|+||+|.+|..++..+...|.+|+++++++++.......+. .++..+-.+.    +.+.+..  .+.|+||.|+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~gD~~d~----~~l~~al--~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQA----ADVDKTV--AGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTSH----HHHHHHH--TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccc-ccccccccch----hhHHHHh--cCCCEEEEEe
Confidence            4689999999999999998888889999999999887554333344 3344433332    3333333  3689999998


Q ss_pred             Chh-----------hHHHHHhcccCCC--EEEEEec
Q 019196          227 GGK-----------LTKESLKLLNWGA--QILVIGF  249 (344)
Q Consensus       227 g~~-----------~~~~~~~~l~~~G--~~v~~g~  249 (344)
                      |..           .....++.++..|  +++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            741           1223444445543  7777754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.25  E-value=4.9e-05  Score=61.52  Aligned_cols=76  Identities=26%  Similarity=0.297  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~vi  223 (344)
                      .++++||+|+++++|.++++.+...|++|++++++.++.+.+.    ....|..+.+   .++++.+..  ..+++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~---~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSD---AVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHH---HHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHH---HHHHHHHHHHHhcCCceEEE
Confidence            5789999999999999999999999999999999866433211    1122333322   233332221  124699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      +++|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            99874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.0016  Score=53.84  Aligned_cols=105  Identities=20%  Similarity=0.154  Sum_probs=64.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEE---EEecCHHHHH----HHHhc---CCcE-EEeCCCCCchhhHHHHHHHhcC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATII---AVARGAEKIK----FLKSL---GVDH-VVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~---~~~~~~~~~~----~~~~~---g~~~-v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      +-|||+|+++|+|.+++..+...|++++   .+.++.++.+    .++++   +... .+..+-. ..+.+.++......
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~   81 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERVTE   81 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTCTT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc-chHhhhhhhhhccc
Confidence            3468999999999999999988898644   4455443322    22333   2222 2333322 22335555555555


Q ss_pred             CCccEEEeCCChh--------------------------hHHHHHhcc--cCCCEEEEEeccCCC
Q 019196          217 KGVDVLYDPVGGK--------------------------LTKESLKLL--NWGAQILVIGFASGE  253 (344)
Q Consensus       217 ~~~d~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~  253 (344)
                      +..|+++++.|..                          ..+.++..|  +.+|+++.++...+.
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~  146 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL  146 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc
Confidence            6799999998741                          123444555  346899999876543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.0035  Score=46.52  Aligned_cols=104  Identities=18%  Similarity=0.193  Sum_probs=74.4

Q ss_pred             HHHHHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019196          134 SHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       134 a~~~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      .+.++.+..+ .-.|++++|.|- |-+|..+++.++.+|++|++++.++-+.-.+.--|+. +.     .    .++.  
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~-----~----~~~a--   76 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT-----T----MDEA--   76 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----C----HHHH--
T ss_pred             HHHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee-----e----hhhh--
Confidence            3444444444 348999999999 9999999999999999999999998765444444543 21     1    2222  


Q ss_pred             HhcCCCccEEEeCCChh-h-HHHHHhcccCCCEEEEEeccCCC
Q 019196          213 ARKLKGVDVLYDPVGGK-L-TKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                         -...|+++-|+|.. . -.+-++.|+++..++.+|....+
T Consensus        77 ---~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~E  116 (163)
T d1li4a1          77 ---CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVE  116 (163)
T ss_dssp             ---TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTS
T ss_pred             ---hhhccEEEecCCCccchhHHHHHhccCCeEEEEeccccce
Confidence               13579999999973 3 36788999999888777754433

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.19  E-value=0.0017  Score=49.09  Aligned_cols=90  Identities=19%  Similarity=0.129  Sum_probs=66.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +|+|.|. |.+|...+..++..|.  +|++.+++++..+.+++.+. +..... ....           .....|+|+-|
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~-----------~~~~~dlIila   69 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS-IAKV-----------EDFSPDFVMLS   69 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC-GGGG-----------GGTCCSEEEEC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhh-hhhh-----------hcccccccccc
Confidence            6999998 9999999998888875  89999999999999998885 333321 1111           12358999999


Q ss_pred             CChhh----HHHHHhcccCCCEEEEEeccC
Q 019196          226 VGGKL----TKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       226 ~g~~~----~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +....    +......+.++..+++++...
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~~ii~d~~s~k   99 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSEDATVTDQGSVK   99 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             CCchhhhhhhhhhhcccccccccccccccc
Confidence            98643    345567778888888776543

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.0018  Score=53.35  Aligned_cols=102  Identities=13%  Similarity=0.122  Sum_probs=70.0

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~  212 (344)
                      -+.+.+++++|++||=+|+  |.|..+..+++..|++|++++.++++.+.+++    .|...-+.....++.+       
T Consensus        53 ~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~-------  123 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ-------  123 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG-------
T ss_pred             HHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhc-------
Confidence            3457889999999999996  78899999999999999999999998887754    3321111111112210       


Q ss_pred             HhcCCCccEEEe-----CCCh----hhHHHHHhcccCCCEEEEEec
Q 019196          213 ARKLKGVDVLYD-----PVGG----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       213 ~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                        ....||.|+-     .++.    ..+..+.++|+|+|+++.-..
T Consensus       124 --~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~i  167 (285)
T d1kpga_         124 --FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  167 (285)
T ss_dssp             --CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             --ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEEE
Confidence              1246887753     2332    245778899999999986443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.16  E-value=0.00098  Score=54.74  Aligned_cols=82  Identities=20%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHH---Hh-cCCcEEEeCCCCCchhhHHHHHHH--hcCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFL---KS-LGVDHVVDLSNESVIPSVKEFLKA--RKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~-~g~~~v~~~~~~~~~~~~~~~~~~--~~~~  217 (344)
                      .|+++||+|++|  ++|.++++.+...|++|+++.++++..+.+   .+ .+...+...+..+. ....++...  ....
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccch-hhHHHHHHHHHHHcC
Confidence            588999999865  799999999999999999999886433333   22 33323333332222 112222211  1235


Q ss_pred             CccEEEeCCCh
Q 019196          218 GVDVLYDPVGG  228 (344)
Q Consensus       218 ~~d~vid~~g~  228 (344)
                      ++|+++++.+.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999998874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.15  E-value=0.002  Score=52.97  Aligned_cols=114  Identities=13%  Similarity=0.134  Sum_probs=74.7

Q ss_pred             CCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc
Q 019196          118 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD  193 (344)
Q Consensus       118 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~  193 (344)
                      +-++++|..      ..+.-+.+.+++++|++||=+|+  |.|..+..+++..|++|++++.+++..+.+++    .|..
T Consensus        30 ~~tL~~AQ~------~k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~  101 (280)
T d2fk8a1          30 ELTLEEAQY------AKVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN  101 (280)
T ss_dssp             TCCHHHHHH------HHHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred             CCCHHHHHH------HHHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccc
Confidence            345666641      22344567888999999999997  55667788888889999999999998777753    3422


Q ss_pred             EEEeCCCCCchhhHHHHHHHhcCCCccEEEeC-----CCh----hhHHHHHhcccCCCEEEEEe
Q 019196          194 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       194 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ..+.....++.+         ....||.|+-.     ++.    ..++.+.++|+|+|+++.-.
T Consensus       102 ~~~~~~~~d~~~---------~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         102 RSRQVLLQGWED---------FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             SCEEEEESCGGG---------CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             cchhhhhhhhhh---------hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            111111112210         13468888532     232    23577889999999998743

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.0012  Score=53.34  Aligned_cols=48  Identities=25%  Similarity=0.300  Sum_probs=41.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD  193 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~  193 (344)
                      +|+.+||+||++++|.+.++.+...|++|++++++.++.+.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999998876655 566644

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.12  E-value=0.0008  Score=53.42  Aligned_cols=109  Identities=18%  Similarity=0.229  Sum_probs=68.0

Q ss_pred             hccchHHHHHHHHHHhc--CCCCCCEEEEecCCChHHHHHHHHHHHc---C----CeEEEEecCHHHHHHHHh-------
Q 019196          126 ALPVAFGTSHVALVHRA--QLSSGQVLLVLGAAGGVGVAAVQIGKVC---G----ATIIAVARGAEKIKFLKS-------  189 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~--~~~~~~~vlI~g~~g~~G~~~~~~~~~~---g----~~v~~~~~~~~~~~~~~~-------  189 (344)
                      ++..+...|. .+ +..  .++++++||..|.  +.|+.++.+++..   |    .+|+.++.+++-.+.+++       
T Consensus        60 ~is~P~~~a~-~l-~~L~~~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~  135 (223)
T d1r18a_          60 TISAPHMHAF-AL-EYLRDHLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDR  135 (223)
T ss_dssp             EECCHHHHHH-HH-HHTTTTCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred             eeehhhhHHH-HH-HHHhhccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcch
Confidence            3444555554 23 443  7899999999996  5677777666654   3    489999998875555432       


Q ss_pred             --cCCcE--EEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhhH-HHHHhcccCCCEEEEE
Q 019196          190 --LGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI  247 (344)
Q Consensus       190 --~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (344)
                        .+...  +...+....         ......||.|+-+.+-+.+ +..++.|+++|+++..
T Consensus       136 ~~~~~~nv~~~~~d~~~~---------~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         136 SMLDSGQLLIVEGDGRKG---------YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHHHTSEEEEESCGGGC---------CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhcCccEEEEEecccccc---------cccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence              12111  221111110         0123579999887775443 6678999999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.11  E-value=0.0017  Score=45.52  Aligned_cols=89  Identities=9%  Similarity=-0.006  Sum_probs=61.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHHHhcCCcEEEe-CCCCCchhhHHHHHHHhcCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVD-LSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+++|||.|+ |.+|..-++.+...|++|++++....  -..++++-+....-. +...++             .++++|
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl-------------~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL-------------DSCWLA   76 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG-------------TTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHh-------------CCCcEE
Confidence            4789999999 99999999999999999988876543  222333322222211 222221             478999


Q ss_pred             EeCCChhhH-HHHHhcccCCCEEEEEe
Q 019196          223 YDPVGGKLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       223 id~~g~~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      +.|++.+.. .......++.|..+-+.
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeC
Confidence            999988655 46678888899888765

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.0019  Score=51.21  Aligned_cols=108  Identities=15%  Similarity=0.163  Sum_probs=70.9

Q ss_pred             ccchHHHHHHHHHHhc--CCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCC-----c
Q 019196          127 LPVAFGTSHVALVHRA--QLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGV-----D  193 (344)
Q Consensus       127 l~~~~~ta~~~l~~~~--~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~-----~  193 (344)
                      +..+...|. .+ +..  .++++++||-.|+  |.|..++.+++..|  .+|+.++.+++-.+.+++    .+.     .
T Consensus        57 is~P~~~a~-~l-e~L~~~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~  132 (224)
T d1i1na_          57 ISAPHMHAY-AL-ELLFDQLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSG  132 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTTTSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTS
T ss_pred             hhhhHHHHH-HH-HHHhhccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCccccccc
Confidence            444555554 33 444  7899999999996  67888888888765  489999999876665532    221     1


Q ss_pred             --EEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChh-hHHHHHhcccCCCEEEEE
Q 019196          194 --HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVI  247 (344)
Q Consensus       194 --~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  247 (344)
                        .+...+....         ......||.|+.+...+ ..+..++.|+++|+++..
T Consensus       133 ~~~~~~gD~~~~---------~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         133 RVQLVVGDGRMG---------YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             SEEEEESCGGGC---------CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ceEEEEeecccc---------cchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence              1111111100         01234799999877654 446788999999999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.03  E-value=0.0039  Score=47.93  Aligned_cols=99  Identities=11%  Similarity=0.095  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CCc-----------------EEEeCCCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-----------------HVVDLSNE  201 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~-----------------~v~~~~~~  201 (344)
                      ....+.|+++||..|+  |.|..+..+|+ .|++|++++.|++-.+.+++. +..                 ..+..+-.
T Consensus        14 ~~l~~~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            4567899999999997  66888888887 499999999999988888652 110                 01111111


Q ss_pred             CchhhHHHHHHHhcCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEec
Q 019196          202 SVIPSVKEFLKARKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      +..   ..     ....+|+|++...-         ..+..+.++|+|+|+++....
T Consensus        91 ~l~---~~-----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~  139 (201)
T d1pjza_          91 ALT---AR-----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL  139 (201)
T ss_dssp             SST---HH-----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred             ccc---cc-----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEc
Confidence            110   00     11358999875442         234667899999999876543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.0027  Score=51.62  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHH-HH--cCCeEEEEecCHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIG-KV--CGATIIAVARGAEKIKFL  187 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~-~~--~g~~v~~~~~~~~~~~~~  187 (344)
                      .++.++|+|+++++|.++++.+ +.  .|++|++++++.++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHH
Confidence            4678899999999999888765 42  589999999999887665

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.0037  Score=50.62  Aligned_cols=184  Identities=15%  Similarity=0.137  Sum_probs=102.3

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHH-HhcCCC
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK-ARKLKG  218 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~-~~~~~~  218 (344)
                      .++++||+|+++  ++|.+++..+...|++|+++.++++..+.++    ..+.......+..+..+......+ ......
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            578999999988  7889999999899999999999866544443    344444444444333222222222 223456


Q ss_pred             ccEEEeCCChh-------------------------------hHHHHHhcccCCCEEEEEeccCCCCCC--cchh-----
Q 019196          219 VDVLYDPVGGK-------------------------------LTKESLKLLNWGAQILVIGFASGEIPV--IPAN-----  260 (344)
Q Consensus       219 ~d~vid~~g~~-------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~-----  260 (344)
                      .|+.+++++..                               ........+++++.++.++........  ....     
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKa  163 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  163 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHH
Confidence            89999886531                               012334566777888887765432221  1100     


Q ss_pred             -----------hhhccceEEEEEEeccccccCch---hHHHHHHHHHHHHHCCceeEeeeeeechhhHHHHHHHHHcCC-
Q 019196          261 -----------IALVKNWTVHGLYWGSYKIHRPH---VLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK-  325 (344)
Q Consensus       261 -----------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~g~i~~~~~~~~~l~~~~ea~~~~~~~~-  325 (344)
                                 ++-.+++++.....+.......+   ......+...+...-+       ..-..+|+.++..+|.+.. 
T Consensus       164 al~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~-------R~~~peeia~~v~fL~s~~s  236 (258)
T d1qsga_         164 SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR-------RTVTIEDVGNSAAFLCSDLS  236 (258)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS-------SCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC-------CCcCHHHHHHHHHHHhCchh
Confidence                       12356788888776654322211   1122233333222222       2234688888888887543 


Q ss_pred             -cceeEEEEecC
Q 019196          326 -VIGKVMIAFDD  336 (344)
Q Consensus       326 -~~gkvvi~~~~  336 (344)
                       ..--.++.+|.
T Consensus       237 ~~itG~~i~vDG  248 (258)
T d1qsga_         237 AGISGEVVHVDG  248 (258)
T ss_dssp             TTCCSCEEEEST
T ss_pred             cCccCceEEECc
Confidence             22234445554

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.91  E-value=0.0033  Score=45.30  Aligned_cols=73  Identities=19%  Similarity=0.267  Sum_probs=54.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +++|.|. |.+|..+++.+...|.+|++++.++++.+.+++.+...++ .+..+.     +.+...+-..+|.++-+++.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~-----~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-ANATEE-----NELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEE-CCTTCT-----THHHHHTGGGCSEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCccee-eecccc-----hhhhccCCccccEEEEEcCc
Confidence            5788998 9999999999999999999999999999998888764433 322221     12222233468988888875

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.89  E-value=0.0022  Score=51.37  Aligned_cols=92  Identities=18%  Similarity=0.206  Sum_probs=68.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +.++.+||=+|+  |.|..+..+++ .|++|++++.+++..+.+++.+....+..+..+..         .....||+|+
T Consensus        40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~---------~~~~~fD~ii  107 (246)
T d2avna1          40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP---------FPSGAFEAVL  107 (246)
T ss_dssp             CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC---------SCTTCEEEEE
T ss_pred             cCCCCEEEEECC--CCchhcccccc-cceEEEEeecccccccccccccccccccccccccc---------ccccccccee
Confidence            557789998886  57888888876 58999999999999999988776655554443320         1235799998


Q ss_pred             eCCCh--------hhHHHHHhcccCCCEEEEE
Q 019196          224 DPVGG--------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       224 d~~g~--------~~~~~~~~~l~~~G~~v~~  247 (344)
                      .+...        ..+..+.++|+|||.++..
T Consensus       108 ~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         108 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            65442        2456788999999988764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.89  E-value=0.0031  Score=50.28  Aligned_cols=101  Identities=21%  Similarity=0.293  Sum_probs=68.8

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc-E-EEeCCCCCchhhHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-H-VVDLSNESVIPSVKEF  210 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~-v~~~~~~~~~~~~~~~  210 (344)
                      .+.+.+.++|+++||=+|+  |.|..+..+++. +.+|++++.+++-.+.+++    .+.+ . ....+..+. +     
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~-~-----   77 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-P-----   77 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-C-----
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccc-c-----
Confidence            3557889999999999996  668888888774 6899999999886666643    3332 1 122121111 0     


Q ss_pred             HHHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          211 LKARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                         ...+.||+|+-+-.-       ..+..+.+.|+|+|+++....
T Consensus        78 ---~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~~  120 (234)
T d1xxla_          78 ---FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  120 (234)
T ss_dssp             ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEEc
Confidence               023569999864432       346788899999999888643

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.87  E-value=0.0038  Score=50.58  Aligned_cols=100  Identities=19%  Similarity=0.257  Sum_probs=70.7

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----c-C--C-cEEEeCCCCCchhhHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----L-G--V-DHVVDLSNESVIPSVK  208 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~-g--~-~~v~~~~~~~~~~~~~  208 (344)
                      ...++++||++||=.|.  |.|.++..+|+..|  .+|+.++.+++..+.+++    + +  . +..+...+  ..+   
T Consensus        89 i~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d--~~~---  161 (264)
T d1i9ga_          89 VHEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD--LAD---  161 (264)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC--GGG---
T ss_pred             HHHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc--ccc---
Confidence            46789999999999885  67999999999876  489999999998887753    2 1  1 22222221  100   


Q ss_pred             HHHHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          209 EFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                         .......||.||--...  ..+..+.+.|+|+|+++.+-
T Consensus       162 ---~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 ---SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             ---CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence               00124569988765554  56788999999999998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.86  E-value=0.0069  Score=44.64  Aligned_cols=82  Identities=26%  Similarity=0.277  Sum_probs=58.9

Q ss_pred             EEEEecCCChHHHHHHHH-HHHcCCeEEEEecCHHHHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQI-GKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~-~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +|.+.|+ |.+|.+.++- ++.-+.++++.++++++.+.++ ++|... .+ +....             ...|+||-|+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~-~~~~v-------------~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SA-TLPEL-------------HSDDVLILAV   65 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ES-SCCCC-------------CTTSEEEECS
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-cc-ccccc-------------cccceEEEec
Confidence            5889999 9999988774 4544479999999999887775 466532 22 11211             3479999999


Q ss_pred             ChhhHHHHHhcccCCCEEEE
Q 019196          227 GGKLTKESLKLLNWGAQILV  246 (344)
Q Consensus       227 g~~~~~~~~~~l~~~G~~v~  246 (344)
                      ....+...++-+++.+.++.
T Consensus        66 kP~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          66 KPQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             CHHHHHHHHTTCCCTTCEEE
T ss_pred             CHHHHHHhHHHHhhcccEEe
Confidence            87778888877777665543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.85  E-value=0.0022  Score=52.29  Aligned_cols=83  Identities=16%  Similarity=0.264  Sum_probs=52.8

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCHHHHH-HH-HhcCCcE-EEe--CCCCCchhh-HHHHHHH-hc
Q 019196          145 SSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIK-FL-KSLGVDH-VVD--LSNESVIPS-VKEFLKA-RK  215 (344)
Q Consensus       145 ~~~~~vlI~g~~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-~~-~~~g~~~-v~~--~~~~~~~~~-~~~~~~~-~~  215 (344)
                      =.|+++||+|++  .++|.++++.+...|++|+.+.++.++.. .+ ++++... .+.  ..+.+-.+. .+.+.+. ..
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            367899999954  57999999999999999999998877653 23 3455322 222  222211111 2222222 23


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      ....|+++++++
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence            456899999987

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.0016  Score=51.46  Aligned_cols=106  Identities=20%  Similarity=0.255  Sum_probs=72.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...+....++||-+|  ++.|+.++.+|+.+  +.+|+.++.+++..+.++    +.|....+.....+..+...+....
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~  130 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA  130 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhh
Confidence            345556678999999  47788899999876  569999999988766664    3454333333333443334444443


Q ss_pred             hcCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEE
Q 019196          214 RKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       214 ~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (344)
                      .....||+||--...    ..++.+++.|+++|.++.=
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            445579999865543    3567899999999999873

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.81  E-value=0.0069  Score=46.18  Aligned_cols=94  Identities=23%  Similarity=0.321  Sum_probs=58.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH----HhcC--C---cEEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL----KSLG--V---DHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~----~~~g--~---~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .+++|+|+|+ |+.+.+++..+...|+ +++++.+++++.+.+    ++++  .   ....+..+      ...+.... 
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~-   88 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD------QQAFAEAL-   88 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC------HHHHHHHH-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc------ccchhhhh-
Confidence            5689999999 9999999999888898 788888886654433    2332  1   12223322      12222222 


Q ss_pred             CCCccEEEeCCChhhH----H---HHHhcccCCCEEEEEe
Q 019196          216 LKGVDVLYDPVGGKLT----K---ESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 ~~~~d~vid~~g~~~~----~---~~~~~l~~~G~~v~~g  248 (344)
                       ..+|+++||++..+.    +   .-+..++++..++++-
T Consensus        89 -~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          89 -ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             -HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             -cccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence             358999999874221    1   1134567777777663

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.75  E-value=0.0035  Score=50.59  Aligned_cols=93  Identities=25%  Similarity=0.308  Sum_probs=63.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcE-EEeCCCCCchhhHHHHHHHhcCCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-VVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      .+++++||=+|+  |.|.+++.+++ .|++|++++.+++-.+.+++    .|... ++..   +    ..+   ......
T Consensus       118 ~~~g~~VLDiGc--GsG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d----~~~---~~~~~~  184 (254)
T d2nxca1         118 LRPGDKVLDLGT--GSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---S----LEA---ALPFGP  184 (254)
T ss_dssp             CCTTCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---C----HHH---HGGGCC
T ss_pred             cCccCEEEEccc--chhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---c----ccc---cccccc
Confidence            678999999997  34666666554 68999999999987776653    34332 2221   1    111   123457


Q ss_pred             ccEEEeCCCh----hhHHHHHhcccCCCEEEEEec
Q 019196          219 VDVLYDPVGG----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       219 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ||+|+.+...    ..+..+.+.|+|+|+++..|.
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            9999976554    234667799999999997653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.74  E-value=0.0075  Score=44.45  Aligned_cols=100  Identities=22%  Similarity=0.219  Sum_probs=73.0

Q ss_pred             HHHHhcC-CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          137 ALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       137 ~l~~~~~-~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ++.+..+ +-.|++++|.|- |-+|.-.++-+|.+|++|+++..++-+.=++.--|+. +..         .++.     
T Consensus        12 ~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~~---------~~~a-----   75 (163)
T d1v8ba1          12 GLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VVT---------LDEI-----   75 (163)
T ss_dssp             HHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-ECC---------HHHH-----
T ss_pred             HHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cCc---------hhHc-----
Confidence            3334434 458999999999 9999999999999999999999998654444334442 211         2222     


Q ss_pred             CCCccEEEeCCChhh--HHHHHhcccCCCEEEEEeccCC
Q 019196          216 LKGVDVLYDPVGGKL--TKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       216 ~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                      -...|+++-++|...  -.+-++.|+.+..+...|-...
T Consensus        76 ~~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~  114 (163)
T d1v8ba1          76 VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD  114 (163)
T ss_dssp             TTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             cccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccch
Confidence            145799999999843  3667899999998888775443

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.68  E-value=0.004  Score=49.33  Aligned_cols=105  Identities=18%  Similarity=0.265  Sum_probs=71.2

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..+....++||-+|  +.+|+.++.+|+.+  +.+++.++.+++..+.++    +.|...-+.....+..+.+.++....
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~  131 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCG
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhcc
Confidence            34445668899999  58899999999887  569999999988777665    35654333333344433344443321


Q ss_pred             -cCCCccEEEeCCC-h---hhHHHHHhcccCCCEEEEE
Q 019196          215 -KLKGVDVLYDPVG-G---KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 -~~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~  247 (344)
                       ....||+||-=+. .   ..++.+++.++++|.++.=
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence             2357999985433 2   4568899999999998874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.62  E-value=0.0043  Score=50.37  Aligned_cols=79  Identities=14%  Similarity=0.169  Sum_probs=50.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HH-HHh----cCCcEEEe-CC---CCCchhhHHHHHHHh--cC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KF-LKS----LGVDHVVD-LS---NESVIPSVKEFLKAR--KL  216 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~-~~~----~g~~~v~~-~~---~~~~~~~~~~~~~~~--~~  216 (344)
                      ..||+|+++++|.+.+..+...|++|++++++.++. +. +++    .+...... ..   +.+..+...++.+..  ..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            469999999999999999999999999999886543 22 222    23333322 11   122222233332211  12


Q ss_pred             CCccEEEeCCC
Q 019196          217 KGVDVLYDPVG  227 (344)
Q Consensus       217 ~~~d~vid~~g  227 (344)
                      +++|++++++|
T Consensus        83 g~iDilvnnAG   93 (266)
T d1mxha_          83 GRCDVLVNNAS   93 (266)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999988

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.62  E-value=0.0052  Score=47.05  Aligned_cols=99  Identities=21%  Similarity=0.285  Sum_probs=66.0

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ...+++++++||=+|+  |.|..+..+|+. +.+|++++.+++..+.++    ++|.. .+ .....+.    .+..  .
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~gda----~~~~--~   96 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGDA----PEAL--C   96 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESCH----HHHH--T
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEECch----hhcc--c
Confidence            4568899999998886  556667777764 569999999998777774    35532 21 1111121    2221  2


Q ss_pred             cCCCccEEEeCCCh----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||.|+-..+.    +.++.+.+.|+|+|+++...
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            34579999865543    35677889999999988654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.56  E-value=0.011  Score=48.50  Aligned_cols=102  Identities=20%  Similarity=0.104  Sum_probs=70.0

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc---EEEeCCCCCchhhHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEF  210 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~  210 (344)
                      +.....+.++.+||=+|+  |.|..+..+++..|++|++++.++...+.+++    .|..   .+...+-.+..      
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~------  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP------  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS------
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc------
Confidence            345667899999999997  56778888888889999999999887766643    3422   22222222210      


Q ss_pred             HHHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEecc
Q 019196          211 LKARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                         .....||+|+-.-.-       ..+..+.+.|+|+|+++.....
T Consensus       131 ---~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         131 ---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             ---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             ---ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence               023569999753321       3467888999999999886543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.53  E-value=0.0075  Score=43.35  Aligned_cols=32  Identities=31%  Similarity=0.274  Sum_probs=24.5

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKV-CGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~-~g~~v~~~~~~  180 (344)
                      +|.|.|++|.+|..+++.... .+.++.+....
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            589999999999998887655 46677665543

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.011  Score=49.27  Aligned_cols=101  Identities=15%  Similarity=0.163  Sum_probs=67.2

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHh----cC-----------CcE--EEeCC
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKS----LG-----------VDH--VVDLS  199 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~----~g-----------~~~--v~~~~  199 (344)
                      ...++++||++||=.|.  |.|.++..+|+..|.  +|+.++.+++..+.+++    ++           .+.  ....+
T Consensus        91 l~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          91 LSMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            36788999999999886  569999999998764  89999999988777643    11           111  11111


Q ss_pred             CCCchhhHHHHHHHhcCCCccEEEeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          200 NESVIPSVKEFLKARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                      -.+.   ...    .....||.||--.+.  ..+..+.+.|+|+|+++.+-
T Consensus       169 i~~~---~~~----~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         169 ISGA---TED----IKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             TTCC---C-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hhhc---ccc----cCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1111   111    123458988754443  57789999999999999865

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.49  E-value=0.0039  Score=49.40  Aligned_cols=101  Identities=17%  Similarity=0.232  Sum_probs=68.4

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE--EEeCCCCCchhhHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH--VVDLSNESVIPSVKEFL  211 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~~  211 (344)
                      +.+.++++++++||=+|+  |.|..+..+++ .|++|++++.+++-.+.++    +.+...  +...+..+..       
T Consensus         7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-------   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT--GGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-------   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC--TTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-------
T ss_pred             HHHhcCCCCcCEEEEecc--cCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-------
Confidence            447889999999999997  46777777775 4789999999988666664    344332  2222222110       


Q ss_pred             HHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEecc
Q 019196          212 KARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                        .....||+|+-.-.-       ..+..+.+.|+|+|+++.....
T Consensus        77 --~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~  120 (231)
T d1vl5a_          77 --FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS  120 (231)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             --ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence              023469999865331       3568899999999999986543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.44  E-value=0.0068  Score=44.71  Aligned_cols=85  Identities=19%  Similarity=0.270  Sum_probs=64.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|.+.|+ |.+|.+.+.-+...|.++++..++.++.+.+ +++|.....     +    .+++.     ...|+||-|+.
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~----~~~~~-----~~~dvIilavk   66 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----S----HQDLI-----DQVDLVILGIK   66 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----S----HHHHH-----HTCSEEEECSC
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----h----hhhhh-----hccceeeeecc
Confidence            4788999 9999988887777788999999998887765 566754221     1    22222     25899999998


Q ss_pred             hhhHHHHHhcccCCCEEEEEe
Q 019196          228 GKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...+...+..++++..++++.
T Consensus        67 p~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          67 PQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             GGGHHHHHTTSCCCSCEEECC
T ss_pred             hHhHHHHhhhcccceeEeccc
Confidence            888888899999888877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.43  E-value=0.0033  Score=49.88  Aligned_cols=73  Identities=19%  Similarity=0.143  Sum_probs=47.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+|||+||+|.+|..++..+...|.  .|+.+.+++++.+.... +. +.+..+..+.    ....+..  .++|.|+.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~-~~~~~d~~~~----~~~~~~~--~~~d~vi~~   75 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EA-DVFIGDITDA----DSINPAF--QGIDALVIL   75 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CT-TEEECCTTSH----HHHHHHH--TTCSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-Cc-EEEEeeeccc----ccccccc--ccceeeEEE
Confidence            5899999999999999999887775  57777887765543321 22 2333333322    2333333  468999998


Q ss_pred             CCh
Q 019196          226 VGG  228 (344)
Q Consensus       226 ~g~  228 (344)
                      ++.
T Consensus        76 a~~   78 (252)
T d2q46a1          76 TSA   78 (252)
T ss_dssp             CCC
T ss_pred             Eee
Confidence            763

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.00031  Score=47.58  Aligned_cols=36  Identities=19%  Similarity=0.304  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .+++|+|+|. |..|+++++++...|++|++.+.+..
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4678999999 99999999999999999999998543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.01  Score=44.92  Aligned_cols=37  Identities=22%  Similarity=0.238  Sum_probs=33.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ....++|+|+|+ |+.|+.++..+...|.+|++.+..+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345689999999 9999999999999999999999764

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0033  Score=50.01  Aligned_cols=98  Identities=15%  Similarity=0.142  Sum_probs=64.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc---EEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD---HVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      ..++.+||-+|+  |.|..+..+++..+.+|++++.+++-.+.+++....   .+... ..+    ............||
T Consensus        51 ~~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~fD  123 (229)
T d1zx0a1          51 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL-KGL----WEDVAPTLPDGHFD  123 (229)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE-ESC----HHHHGGGSCTTCEE
T ss_pred             ccCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccc-ccc----cccccccccccccc
Confidence            367889999996  678888888887667999999999988888653211   11111 111    22233333445799


Q ss_pred             EEE-eCCCh-----------hhHHHHHhcccCCCEEEEEe
Q 019196          221 VLY-DPVGG-----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       221 ~vi-d~~g~-----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .++ |+...           ..+..+.+.|+|||+++...
T Consensus       124 ~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         124 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            884 65432           13456788999999998743

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.30  E-value=0.0046  Score=49.94  Aligned_cols=35  Identities=20%  Similarity=0.470  Sum_probs=31.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      +.|||+|+++++|.++++.+...|++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35899999999999999999999999999998754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.23  E-value=0.0088  Score=50.01  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=48.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEec-----CHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-----GAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|||+||+|-+|..++..+...|++|+++++     ..++...++..+--..+..+-.+.    ..+.+...+.++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~----~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK----NDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH----HHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH----HHHHHHHHhcCCceEE
Confidence            6999999999999999988888999999863     122333444443333443333222    2233333334689999


Q ss_pred             eCCC
Q 019196          224 DPVG  227 (344)
Q Consensus       224 d~~g  227 (344)
                      .+++
T Consensus        78 h~aa   81 (338)
T d1orra_          78 HLAG   81 (338)
T ss_dssp             ECCC
T ss_pred             eecc
Confidence            9886

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.017  Score=45.64  Aligned_cols=117  Identities=14%  Similarity=0.070  Sum_probs=70.9

Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc-------------EE
Q 019196          129 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-------------HV  195 (344)
Q Consensus       129 ~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~-------------~v  195 (344)
                      .+.+..+.  .+...+.++.+||..|+  |.|..+..+++ .|++|++++.|++-.+.+++....             ..
T Consensus        30 ~~~l~~~~--~~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~  104 (229)
T d2bzga1          30 HQLLKKHL--DTFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKV  104 (229)
T ss_dssp             CHHHHHHH--HHHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEE
T ss_pred             CHHHHHHH--HHhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccce
Confidence            34444442  24556788999999997  55888888876 699999999999888777543211             11


Q ss_pred             EeCCCCCchhhHHHHHH--HhcCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEecc
Q 019196          196 VDLSNESVIPSVKEFLK--ARKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       196 ~~~~~~~~~~~~~~~~~--~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .........-...++..  ......||+|+++..-         ..+..+.++|+|+|+++.....
T Consensus       105 ~~~~~~~v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         105 FKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             EEETTSSEEEEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             eeecCCcEEEEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence            11000000000000011  1123468999987642         2346788999999998776544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.06  E-value=0.012  Score=48.06  Aligned_cols=33  Identities=21%  Similarity=0.142  Sum_probs=28.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      +||+|+++++|.+.++.+...|++|+++.++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   37 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   37 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence            589999999999999999999999998776543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.14  Score=38.85  Aligned_cols=39  Identities=21%  Similarity=0.373  Sum_probs=35.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      ++|.|+|+ |.+|...++++...|++|++.+.+++.++.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            57999999 9999999999999999999999998866555

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.03  E-value=0.013  Score=44.31  Aligned_cols=49  Identities=27%  Similarity=0.249  Sum_probs=37.1

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      +|.+...--.+++|||+|+ |+++.+++..+...| +|++..|+.++.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence            4433333346789999999 999998887776555 999999998887655

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.0078  Score=41.68  Aligned_cols=38  Identities=29%  Similarity=0.439  Sum_probs=33.1

Q ss_pred             CCCC-CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          144 LSSG-QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       144 ~~~~-~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++++ .+|.|+|+ |-+|.+.++-|+.+|+++++.+.+++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 46999999 99999999999999999999998765

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.90  E-value=0.032  Score=44.44  Aligned_cols=96  Identities=11%  Similarity=0.173  Sum_probs=64.0

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc-EEEeCCCCCchhhHHHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~~~~  212 (344)
                      +.......+.++||=+|+  |.|..+..+++ .|++|++++.+++-.+.+++    .+.. .....+-.++         
T Consensus        33 ~~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l---------  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI---------  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC---------
T ss_pred             HHHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc---------
Confidence            334455677789999997  45888777776 68999999999887766653    2322 2232221111         


Q ss_pred             HhcCCCccEEEeCCCh----------hhHHHHHhcccCCCEEEE
Q 019196          213 ARKLKGVDVLYDPVGG----------KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       213 ~~~~~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  246 (344)
                       .....||+|+.+.+.          ..+..+.++|+|+|.++.
T Consensus       101 -~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         101 -AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             -CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             123579999876432          235678899999998876

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.88  E-value=0.02  Score=43.97  Aligned_cols=85  Identities=24%  Similarity=0.278  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..++++++.+|++|++.++......  ...+.    ..  .+    +.++..     ..|+++.+
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~--~~~~~----~~--~~----l~~~l~-----~sDii~~~  103 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL--EKKGY----YV--DS----LDDLYK-----QADVISLH  103 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH--HHTTC----BC--SC----HHHHHH-----HCSEEEEC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc--cccee----ee--cc----cccccc-----cccccccc
Confidence            3789999999 99999999999999999999987654322  12221    11  11    344433     36999988


Q ss_pred             CCh--h---hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG--K---LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~--~---~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++.  +   .+ ...++.|+++..+|-++
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  132 (197)
T d1j4aa1         104 VPDVPANVHMINDESIAKMKQDVVIVNVS  132 (197)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred             CCccccccccccHHHHhhhCCccEEEecC
Confidence            763  1   22 66788999998887764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.87  E-value=0.0083  Score=50.62  Aligned_cols=45  Identities=33%  Similarity=0.377  Sum_probs=38.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  188 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~  188 (344)
                      +.+|++|||+|++|-+|..++..+-..|++|++++++.++....+
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            567899999999999999999888778999999999887665553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.83  E-value=0.015  Score=45.46  Aligned_cols=92  Identities=14%  Similarity=0.115  Sum_probs=61.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC-cEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      ++++.+||=+|+  |.|..+..+++ .|++|++++.+++-.+.+++    .+. ...+..+..+..         .....
T Consensus        35 l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~---------~~~~~  102 (226)
T d1ve3a1          35 MKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS---------FEDKT  102 (226)
T ss_dssp             CCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---------SCTTC
T ss_pred             cCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccccc---------ccCcC
Confidence            578899999997  55888888887 58899999999887777653    332 222222222210         12356


Q ss_pred             ccEEEeCCCh---------hhHHHHHhcccCCCEEEEE
Q 019196          219 VDVLYDPVGG---------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       219 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~  247 (344)
                      ||+|+-...-         ..+..+.+.|+|+|+++..
T Consensus       103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            9998754331         1356788999999998764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.82  E-value=0.0072  Score=47.37  Aligned_cols=103  Identities=20%  Similarity=0.272  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      .+....++||-+|.  +.|..++.+|+.+  +.+|++++.+++..+.++    ..|...-+.....+..+.+.++.....
T Consensus        52 v~~~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~  129 (214)
T d2cl5a1          52 IREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYD  129 (214)
T ss_dssp             HHHHCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSC
T ss_pred             HHhhCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhccc
Confidence            33445578999995  6688888888875  579999999988766664    346432223223333222333333334


Q ss_pred             CCCccEEEeCCChh------hHHHHHhcccCCCEEEE
Q 019196          216 LKGVDVLYDPVGGK------LTKESLKLLNWGAQILV  246 (344)
Q Consensus       216 ~~~~d~vid~~g~~------~~~~~~~~l~~~G~~v~  246 (344)
                      ...||++|--...+      .+..+++.++|+|.++.
T Consensus       130 ~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         130 VDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            45799987544332      23456678999997654

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.79  E-value=0.072  Score=45.61  Aligned_cols=104  Identities=22%  Similarity=0.308  Sum_probs=66.7

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc-----------CC---cEEEeCCCCC
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-----------GV---DHVVDLSNES  202 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~-----------g~---~~v~~~~~~~  202 (344)
                      +.+..++++++++|=+|  +|+|..+.++|+..|+ ++++++.++...+.+++.           |.   ...+......
T Consensus       208 Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred             HHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech
Confidence            34788999999887777  5889999999999987 899999998766666421           11   1111111111


Q ss_pred             c-hhhHHHHHHHhcCCCccEEEeC-C--Ch---hhHHHHHhcccCCCEEEEEe
Q 019196          203 V-IPSVKEFLKARKLKGVDVLYDP-V--GG---KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       203 ~-~~~~~~~~~~~~~~~~d~vid~-~--g~---~~~~~~~~~l~~~G~~v~~g  248 (344)
                      . .+....   .  ...+|+++-. .  +.   ..+...++.|+|||+++...
T Consensus       286 ~~~~~~d~---~--~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         286 VDNNRVAE---L--IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             TTCHHHHH---H--GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             hhcccccc---c--cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1 011111   1  1357888743 2  12   34577889999999998753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.75  E-value=0.054  Score=39.40  Aligned_cols=98  Identities=16%  Similarity=0.199  Sum_probs=64.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHH--H-HHHHHhcCCcEEEeCCCCCchh--------------hHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAE--K-IKFLKSLGVDHVVDLSNESVIP--------------SVK  208 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~--------------~~~  208 (344)
                      ++|.|+|++|.+|..+..+.+..  ..+|++.+....  + .+.++++....++-.+......              ..+
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            78999999999999999999876  457777665433  2 2344678777766444332210              011


Q ss_pred             HHHHHhcCCCccEEEeCCC-hhhHHHHHhcccCCCEEEE
Q 019196          209 EFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILV  246 (344)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~  246 (344)
                      .+.+. ....+|+++++.. ...+...+.+++.+-++.+
T Consensus        83 ~l~~~-~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          83 ALVEA-AMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHH-HTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             chhee-cccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence            11111 1235899998864 4777778888888877665

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.75  E-value=0.0046  Score=49.37  Aligned_cols=36  Identities=31%  Similarity=0.358  Sum_probs=33.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++++||+|+++++|.+.++.+...|++|++++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            478999999999999999999999999999998765

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.73  E-value=0.018  Score=42.72  Aligned_cols=86  Identities=17%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|-|.|. |.+|...+.-+...|.+|++.++++++.+.+++.++...   .  +    ..+..     ...|+||-|+..
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~---~--~----~~e~~-----~~~d~ii~~v~~   66 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA---S--T----AKAIA-----EQCDVIITMLPN   66 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC---S--S----HHHHH-----HHCSEEEECCSS
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc---c--c----HHHHH-----hCCCeEEEEcCC
Confidence            4788999 999999998888889999999999999998888776321   1  1    22222     247899999864


Q ss_pred             -hhHHH-------HHhcccCCCEEEEEec
Q 019196          229 -KLTKE-------SLKLLNWGAQILVIGF  249 (344)
Q Consensus       229 -~~~~~-------~~~~l~~~G~~v~~g~  249 (344)
                       +..+.       .+..++++-.++.++-
T Consensus        67 ~~~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          67 SPHVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHhCCcchhhccCCCCEEEECCC
Confidence             33322       4456667777776553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.72  E-value=0.014  Score=45.10  Aligned_cols=79  Identities=27%  Similarity=0.366  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|.+|+|.|. |.+|..+++.+...|++|++.+.+.++......+|+..+ .  ..+.           -....|+++=|
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~--~~~~-----------~~~~~DI~iPc   90 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-A--LEDV-----------LSTPCDVFAPC   90 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-C--GGGG-----------GGCCCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-C--cccc-----------ccccceeeecc
Confidence            5789999998 999999999999999999999999998888888886432 1  1111           12367888877


Q ss_pred             CChh-hHHHHHhccc
Q 019196          226 VGGK-LTKESLKLLN  239 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~  239 (344)
                      ..+. .-......++
T Consensus        91 A~~~~I~~~~a~~i~  105 (201)
T d1c1da1          91 AMGGVITTEVARTLD  105 (201)
T ss_dssp             SCSCCBCHHHHHHCC
T ss_pred             cccccccHHHHhhhh
Confidence            6543 2234444443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.66  E-value=0.027  Score=44.37  Aligned_cols=101  Identities=17%  Similarity=0.222  Sum_probs=67.9

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ....++||++||=+|+  +.|..+..+++..|  .+|++++.+++..+.+++    .+....+..+.....    ...  
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~----~~~--  138 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE----EYR--  138 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG----GGT--
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc----ccc--
Confidence            4567899999999997  56888999999875  489999999987777743    222222222222220    000  


Q ss_pred             hcCCCccEEEeCCCh-----hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKLKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .....+|+++.....     ..+..+...|+++|+++.+-
T Consensus       139 ~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         139 ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            112468988865542     24677889999999988753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.64  E-value=0.038  Score=36.93  Aligned_cols=71  Identities=18%  Similarity=0.186  Sum_probs=50.0

Q ss_pred             CCCCCEEEEecCCChHHHHH-HHHHHHcCCeEEEEecCH-HHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          144 LSSGQVLLVLGAAGGVGVAA-VQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~-~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      .+..+++.+.|- |++|..+ +++++..|++|.+.+... ...+.+++.|..... ......            -.+.|+
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~-g~~~~~------------i~~~d~   70 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYI-GHAEEH------------IEGASV   70 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEE-SCCGGG------------GTTCSE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEE-CCcccc------------CCCCCE
Confidence            456678999999 9999777 799999999999999763 345666778875433 222221            135788


Q ss_pred             EEeCCCh
Q 019196          222 LYDPVGG  228 (344)
Q Consensus       222 vid~~g~  228 (344)
                      |+-+.+-
T Consensus        71 vV~S~AI   77 (96)
T d1p3da1          71 VVVSSAI   77 (96)
T ss_dssp             EEECTTS
T ss_pred             EEECCCc
Confidence            8866553

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.62  E-value=0.049  Score=45.46  Aligned_cols=38  Identities=13%  Similarity=0.049  Sum_probs=31.6

Q ss_pred             CCEEEEec--CCChHHHHHHHHHHHcCCeEEEEecCHHHH
Q 019196          147 GQVLLVLG--AAGGVGVAAVQIGKVCGATIIAVARGAEKI  184 (344)
Q Consensus       147 ~~~vlI~g--~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~  184 (344)
                      ++..||+|  ++.++|.+.++.+...|++|+++.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            56789999  446999999999999999999988766533

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.61  E-value=0.011  Score=45.25  Aligned_cols=39  Identities=23%  Similarity=0.276  Sum_probs=34.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      +|.|+||+|++|.+.++.+...|++|++..|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            578887779999999999999999999999999887655

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.55  E-value=0.057  Score=43.59  Aligned_cols=93  Identities=11%  Similarity=0.040  Sum_probs=66.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcE-EE--eCCCCCchhhHHHHHHHhcCCCc
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDH-VV--DLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      ..++.+||=+|+  |.|..+..+++.. +.++++++.+++-.+.+++...+. ..  +..+..+           ....|
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~-----------~~~sf  148 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF-----------SDTSM  148 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB-----------CTTCE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC-----------CCCCE
Confidence            456778888886  5677777888765 679999999998888886643222 22  2222222           23569


Q ss_pred             cEEEeCCChhhHHHHHhcccCCCEEEEEec
Q 019196          220 DVLYDPVGGKLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       220 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      |+|+.......+.++.+.|+|+|.++....
T Consensus       149 D~v~~~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         149 DAIIRIYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             EEEEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEeecCCHHHHHHHHHHhCCCcEEEEEee
Confidence            999976666778889999999999998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.52  E-value=0.038  Score=40.88  Aligned_cols=45  Identities=13%  Similarity=0.132  Sum_probs=39.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD  193 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~  193 (344)
                      ++|.+.|. |.+|...+.-+...|++|++.++++++.+.+.+.++.
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcc
Confidence            36889999 9999988888877899999999999998888887753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.47  E-value=0.023  Score=43.04  Aligned_cols=82  Identities=23%  Similarity=0.305  Sum_probs=59.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..++++++.+|++|++.++++.+       +....    ..+    ++++.     ...|+|+.+
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~-------~~~~~----~~~----l~ell-----~~sDiv~~~   99 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE-------GPWRF----TNS----LEEAL-----REARAAVCA   99 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC-------SSSCC----BSC----SHHHH-----TTCSEEEEC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc-------cceee----eec----hhhhh-----hccchhhcc
Confidence            4789999999 999999999999999999999886431       11101    012    23332     457999988


Q ss_pred             CCh--h---hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG--K---LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~--~---~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++-  +   .+ ...++.|+++..+|.++
T Consensus       100 ~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         100 LPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             cccccccccccccceeeeccccceEEecc
Confidence            764  1   22 67889999999998875

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.45  E-value=0.057  Score=35.42  Aligned_cols=65  Identities=20%  Similarity=0.329  Sum_probs=46.9

Q ss_pred             EEEEecCCChHHHHH-HHHHHHcCCeEEEEecCH-HHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAA-VQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~-~~~~~~~g~~v~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +|-++|- |++|..+ +++++..|+.|.+.+... +..+.++++|.......+....             .+.|+|+-+.
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i-------------~~~d~vV~Ss   68 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW-------------YDPDLVIKTP   68 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC-------------CCCSEEEECT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc-------------CCCCEEEEec
Confidence            5777888 8999755 688899999999999886 3556778899764433332222             4688888766


Q ss_pred             C
Q 019196          227 G  227 (344)
Q Consensus       227 g  227 (344)
                      .
T Consensus        69 A   69 (89)
T d1j6ua1          69 A   69 (89)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.0067  Score=45.27  Aligned_cols=91  Identities=16%  Similarity=0.069  Sum_probs=57.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      +|+|+|+ |.+|.+.+..+...|.+|+++++++++.......+.+  ........+.   .+..      ..+|++|-|+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~D~iii~v   71 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND---PDFL------ATSDLLLVTL   71 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC---HHHH------HTCSEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccch---hhhh------cccceEEEee
Confidence            6899999 9999999998888999999999987643322222211  0000000011   1111      3689999999


Q ss_pred             ChhhH----HHHHhcccCCCEEEEEec
Q 019196          227 GGKLT----KESLKLLNWGAQILVIGF  249 (344)
Q Consensus       227 g~~~~----~~~~~~l~~~G~~v~~g~  249 (344)
                      .....    +.+...+.++..++.+..
T Consensus        72 ka~~~~~~~~~l~~~~~~~~~Iv~~qN   98 (167)
T d1ks9a2          72 KAWQVSDAVKSLASTLPVTTPILLIHN   98 (167)
T ss_dssp             CGGGHHHHHHHHHTTSCTTSCEEEECS
T ss_pred             cccchHHHHHhhccccCcccEEeeccC
Confidence            87544    344456666777777643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.37  E-value=0.024  Score=48.01  Aligned_cols=34  Identities=24%  Similarity=0.274  Sum_probs=29.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +.|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999998888899999999854

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.36  E-value=0.065  Score=39.35  Aligned_cols=92  Identities=14%  Similarity=0.293  Sum_probs=56.7

Q ss_pred             CEEEEecCCChHHH-HHHHHHHHcC-CeEEEEec-CHH--HHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGV-AAVQIGKVCG-ATIIAVAR-GAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~-~~~~~~~~~g-~~v~~~~~-~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      -++.|+|+ |.+|. ...++++... .+++++++ +.+  ...+++++|.....  .   .   .+.+.......++|+|
T Consensus         5 irvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--~---~---~d~l~~~~~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--A---G---VEGLIKLPEFADIDFV   75 (157)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--S---H---HHHHHHSGGGGGEEEE
T ss_pred             cEEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--c---c---eeeeeecccccccCEE
Confidence            37899995 99986 5667887664 47776654 333  34667788764321  1   1   3344443344579999


Q ss_pred             EeCCCh-hhHH--HHHhcccCCCEEEEEe
Q 019196          223 YDPVGG-KLTK--ESLKLLNWGAQILVIG  248 (344)
Q Consensus       223 id~~g~-~~~~--~~~~~l~~~G~~v~~g  248 (344)
                      |++++. ...+  ...+.++.|-.+++..
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            999985 3443  3445566665666554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.28  E-value=0.013  Score=44.83  Aligned_cols=86  Identities=14%  Similarity=0.219  Sum_probs=56.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEE----EeC-CCCCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV----VDL-SNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v----~~~-~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .+|.|+|+ |.+|.+.+..+...|.+|++.+++++..+.+.+-+.+..    +.. .+-......++..     .+.|++
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEII   81 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCE
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEE
Confidence            36999999 999999999998888899999999988877754331110    000 0100111122221     368999


Q ss_pred             EeCCChhhHHHHHhccc
Q 019196          223 YDPVGGKLTKESLKLLN  239 (344)
Q Consensus       223 id~~g~~~~~~~~~~l~  239 (344)
                      +-+++...+...++.++
T Consensus        82 iiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EECSCHHHHHHHHHHHC
T ss_pred             EEcCcHHHHHHHHHHHH
Confidence            99999877766665443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.21  E-value=0.028  Score=46.94  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=30.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      +++||+||+|-+|..++..+...|++|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            579999999999999999998899999999974

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=95.17  E-value=0.016  Score=48.89  Aligned_cols=78  Identities=14%  Similarity=0.153  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH-HHHhc----CCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FLKSL----GVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .+++|||+||+|-+|..+++.+...|++|++++++..+.. ..+..    +.. .+..+-.+    ...+.+......+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~-~~~~Dl~d----~~~l~~~~~~~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRD----QNKLLESIREFQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTC----HHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCe-EEEeeccC----hHhhhhhhhhchhh
Confidence            4689999999999999999999999999999998765322 22221    222 22222112    12222233334678


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +++.+++.
T Consensus        82 ~v~~~aa~   89 (356)
T d1rkxa_          82 IVFHMAAQ   89 (356)
T ss_dssp             EEEECCSC
T ss_pred             hhhhhhcc
Confidence            99988863

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.16  E-value=0.028  Score=42.98  Aligned_cols=87  Identities=22%  Similarity=0.302  Sum_probs=60.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .|++|.|+|. |.+|..++++++.+|++|++.++.... ......+...   ..  +    ++++..     ..|+|..+
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~~~~~~~---~~--~----l~~ll~-----~sD~i~~~  111 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVERALGLQR---VS--T----LQDLLF-----HSDCVTLH  111 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHHHHTCEE---CS--S----HHHHHH-----HCSEEEEC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchhhhcccc---cc--c----hhhccc-----cCCEEEEe
Confidence            4789999999 999999999999999999999876442 2223333221   11  1    444443     36888887


Q ss_pred             CCh--h---hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG--K---LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~--~---~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++.  +   .+ ...+..|+++..++-++
T Consensus       112 ~plt~~T~~li~~~~l~~mk~~a~lIN~s  140 (193)
T d1mx3a1         112 CGLNEHNHHLINDFTVKQMRQGAFLVNTA  140 (193)
T ss_dssp             CCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred             ecccccchhhhhHHHHhccCCCCeEEecC
Confidence            763  1   22 56788999998887764

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.15  E-value=0.05  Score=41.23  Aligned_cols=86  Identities=23%  Similarity=0.249  Sum_probs=61.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .++++.|.|. |.+|..++++++..|++|++.++...+. .....+...      .+    .+++..     ..|+|..+
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~-~~~~~~~~~------~~----l~ell~-----~sDiv~~~  105 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA-RAAQLGIEL------LS----LDDLLA-----RADFISVH  105 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH-HHHHHTCEE------CC----HHHHHH-----HCSEEEEC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh-HHhhcCcee------cc----HHHHHh-----hCCEEEEc
Confidence            4679999999 9999999999999999999999765432 333333321      11    344433     36999988


Q ss_pred             CCh-h----hH-HHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----LT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~~-~~~~~~l~~~G~~v~~g  248 (344)
                      ++- +    .+ ...++.|+++..++-++
T Consensus       106 ~Plt~~T~~lin~~~l~~mk~~a~lIN~s  134 (184)
T d1ygya1         106 LPKTPETAGLIDKEALAKTKPGVIIVNAA  134 (184)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             CCCCchhhhhhhHHHHhhhCCCceEEEec
Confidence            763 1    23 67889999998888765

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.13  E-value=0.019  Score=43.26  Aligned_cols=94  Identities=16%  Similarity=0.143  Sum_probs=59.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      .+|-++|. |.+|...+.-+...|.+|++.++++++.+.+.+.++....... ...   ..+.....  ...|.++.++.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-a~~---~~~~~~~~--~~~~~ii~~~~   75 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG-AHS---LEEMVSKL--KKPRRIILLVK   75 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSS---HHHHHHHB--CSSCEEEECSC
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccc-hhh---hhhhhhhh--cccceEEEecC
Confidence            46889999 9999999988888899999999999998888665432100000 001   22333222  34567766665


Q ss_pred             h-h----hHHHHHhcccCCCEEEEEe
Q 019196          228 G-K----LTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~-~----~~~~~~~~l~~~G~~v~~g  248 (344)
                      . +    ..+.....++++-.++.++
T Consensus        76 ~~~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          76 AGQAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             TTHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             chHHHHHHHHHHHhccccCcEEEecC
Confidence            4 2    2344556666666666654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.12  E-value=0.0083  Score=49.47  Aligned_cols=97  Identities=11%  Similarity=0.126  Sum_probs=62.3

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc----CCc------EEEeCCCCCchhhHHHH
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVD------HVVDLSNESVIPSVKEF  210 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~------~v~~~~~~~~~~~~~~~  210 (344)
                      ..+.+++++||=+|+  |.|..+..+++. |++|++++.+++-++.|++.    +..      .+.+.   ++   ...-
T Consensus        51 ~l~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~---~~~~  121 (292)
T d1xvaa_          51 LLRQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NW---LTLD  121 (292)
T ss_dssp             HHHHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CG---GGHH
T ss_pred             HhhhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cc---cccc
Confidence            344456789999986  668888888875 89999999999877666432    211      11111   11   0001


Q ss_pred             HHHhcCCCccEEEeCCCh---------------hhHHHHHhcccCCCEEEE
Q 019196          211 LKARKLKGVDVLYDPVGG---------------KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  246 (344)
                      ........||.|+.....               ..+..+.+.|+|+|.++.
T Consensus       122 ~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         122 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            112234579999864321               146788899999999886

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.2  Score=41.51  Aligned_cols=103  Identities=15%  Similarity=0.231  Sum_probs=66.0

Q ss_pred             HHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh-----------cC----CcEEEeCCC
Q 019196          137 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-----------LG----VDHVVDLSN  200 (344)
Q Consensus       137 ~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-----------~g----~~~v~~~~~  200 (344)
                      .+.+..+++++++||=+|+  |.|..+.++|+..++ ++++++.+++..+.+++           +|    .-.....+-
T Consensus       142 ~~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~  219 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF  219 (328)
T ss_dssp             HHHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT
T ss_pred             HHHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc
Confidence            3447888999999888885  789999999998888 79999999876655532           12    112222222


Q ss_pred             CCchhhHHHHHHHhcCCCccEEEeC-CC--h---hhHHHHHhcccCCCEEEEEe
Q 019196          201 ESVIPSVKEFLKARKLKGVDVLYDP-VG--G---KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~-~g--~---~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .+. +    .....  ..+|+|+-. .-  .   ..+...++.|+|||+++..-
T Consensus       220 ~~~-~----~~~~~--~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         220 LSE-E----WRERI--ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TSH-H----HHHHH--HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccc-c----ccccc--CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            211 0    11111  135787742 21  1   24567888999999998753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.02  E-value=0.016  Score=47.05  Aligned_cols=32  Identities=22%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      +|||+||+|-+|..++..++..|.+|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            59999999999999999999999999999875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.99  E-value=0.034  Score=38.81  Aligned_cols=41  Identities=15%  Similarity=0.233  Sum_probs=36.5

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +.....++++|+|.|+ |.+|+-.+..++.+|.+|+++.+.+
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            5566778899999999 9999999999999999999999864

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=94.98  E-value=0.081  Score=44.26  Aligned_cols=38  Identities=18%  Similarity=0.376  Sum_probs=33.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      ..++|||+||+|.+|..++..+...|++|++++++.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            45789999999999999999998899999999987653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.92  E-value=0.049  Score=41.52  Aligned_cols=87  Identities=16%  Similarity=0.085  Sum_probs=60.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      ++++.|+|. |.+|...+++++..|++|++.++...........+..   ...  +    ++++..     ..|+|..++
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~---~~~--~----l~~ll~-----~sD~v~l~~  111 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT---FHD--S----LDSLLS-----VSQFFSLNA  111 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE---ECS--S----HHHHHH-----HCSEEEECC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccccc---ccC--C----HHHHHh-----hCCeEEecC
Confidence            689999999 9999999999999999999998765433332222221   111  1    334432     368998877


Q ss_pred             Ch-----hhH-HHHHhcccCCCEEEEEe
Q 019196          227 GG-----KLT-KESLKLLNWGAQILVIG  248 (344)
Q Consensus       227 g~-----~~~-~~~~~~l~~~G~~v~~g  248 (344)
                      +-     ..+ ...++.|+++..+|-++
T Consensus       112 plt~~T~~li~~~~l~~mk~~a~lIN~s  139 (191)
T d1gdha1         112 PSTPETRYFFNKATIKSLPQGAIVVNTA  139 (191)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             CCCchHhheecHHHhhCcCCccEEEecC
Confidence            53     122 67889999998888764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.91  E-value=0.16  Score=38.65  Aligned_cols=93  Identities=17%  Similarity=0.202  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCcE-EEe-CCCCCchhhHHHHHHHhcCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVD-LSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~~-v~~-~~~~~~~~~~~~~~~~~~~~  217 (344)
                      +++ .+||=+|+  |.|..+..+++ .|++|++++.+++-++.++    +.+.+. .+. .+-...          ....
T Consensus        29 ~~~-grvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~----------~~~~   94 (198)
T d2i6ga1          29 VAP-GRTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL----------TFDG   94 (198)
T ss_dssp             SCS-CEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC----------CCCC
T ss_pred             CCC-CcEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc----------cccc
Confidence            444 48999997  47888887776 5899999999988777654    334432 121 221111          1234


Q ss_pred             CccEEEeCCCh---------hhHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .||+|+...--         ..++.+.++|+++|.++.....
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            69999863321         2456777899999998886543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.86  E-value=0.087  Score=42.23  Aligned_cols=95  Identities=19%  Similarity=0.199  Sum_probs=63.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCC---cEEEeCCCCCchhhHHHHHHHh
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..++++++||-.++  ++|..++.+|+.-+++|++++.+++..+.+++    .|.   -.++..+..++          .
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~----------~  170 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----------P  170 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----------C
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh----------c
Confidence            34689999998886  56777777777655699999999998877753    343   23443333332          1


Q ss_pred             cCCCccEEEeC-C--ChhhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDP-V--GGKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~-~--g~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||.|+-. -  +...+..+++.++++|.+....
T Consensus       171 ~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         171 GENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             CCSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            23468966543 2  2256678999999999775543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.86  E-value=0.064  Score=40.06  Aligned_cols=97  Identities=19%  Similarity=0.171  Sum_probs=59.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEec-C-HHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh---------cC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVAR-G-AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR---------KL  216 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~-~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~---------~~  216 (344)
                      +|.|.|- |.+|..+...+.... .+++.+.. + .+....+.+.+.+......  +.   ........         ..
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASE--EF---IPRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSG--GG---HHHHHHHTCCCSCBHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccc--cc---eeeecccCccccchhhhhh
Confidence            6899998 999998888776543 46665543 2 2344556666655433111  11   11111110         01


Q ss_pred             CCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          217 KGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       217 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      .++|+|+||+|. ...+.+-.++..+-+.|..+.+.
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            369999999997 34455667788888888877654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.85  E-value=0.1  Score=40.29  Aligned_cols=100  Identities=17%  Similarity=0.217  Sum_probs=64.1

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ...++||++||=+|+  +.|..+..+++..+ .+|++++.+++..+.++    ..+-...+..+.... ...     ...
T Consensus        51 ~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~-~~~-----~~~  122 (209)
T d1nt2a_          51 RLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-WKY-----SGI  122 (209)
T ss_dssp             CCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-GGT-----TTT
T ss_pred             cCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCc-ccc-----ccc
Confidence            467899999999997  45677778888764 48999999998776663    333222221221111 000     011


Q ss_pred             CCCccEEEeCCCh-----hhHHHHHhcccCCCEEEEEe
Q 019196          216 LKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       216 ~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ...+|+++.....     ..+..+.+.|+++|.++.+.
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            2357888765432     24577889999999998764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.79  E-value=0.12  Score=40.62  Aligned_cols=101  Identities=16%  Similarity=0.192  Sum_probs=65.2

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHh
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      +...++||++||=+|+  +.|..+..+++.. +.+|++++.+++-.+.+++.    +....+..+......    ..  .
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~----~~--~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YA--N  139 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GT--T
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc----cc--c
Confidence            5667899999999998  4577778888764 45999999999877777543    222222222222210    00  1


Q ss_pred             cCCCccEEEeCCCh-----hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG-----KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....+|+++.....     ..+..+...|+|+|.++..-
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            12346667765542     23577889999999988754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.79  E-value=0.042  Score=46.97  Aligned_cols=32  Identities=22%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEe
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA  178 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~  178 (344)
                      |.+|||+|++|-+|..++..+...|++|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            57899999999999999999988999999986

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.78  E-value=0.019  Score=40.73  Aligned_cols=73  Identities=16%  Similarity=0.141  Sum_probs=48.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCCh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG  228 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (344)
                      +|.|+|++|.+|.+..+++...+.++++......                  ...            -..+|+++|.+..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~------------------~~~------------~~~~DVvIDFS~p   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG------------------VEE------------LDSPDVVIDFSSP   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE------------------EEE------------CSCCSEEEECSCG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc------------------HHH------------hccCCEEEEecCH
Confidence            5899999999999999999988887765432110                  000            1346888888777


Q ss_pred             hhHHHHHhcccCCCEEEEEeccC
Q 019196          229 KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +.....++.....+.=+.+|-++
T Consensus        52 ~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          52 EALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             GGHHHHHHHHHHHTCEEEECCCS
T ss_pred             HHHHHHHHHHHhcCCCEEEEcCC
Confidence            76666665555555555555443

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.75  E-value=0.22  Score=37.69  Aligned_cols=96  Identities=20%  Similarity=0.219  Sum_probs=62.9

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc----EEEeCCCCCchhhHHHH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD----HVVDLSNESVIPSVKEF  210 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~----~v~~~~~~~~~~~~~~~  210 (344)
                      .+.....++++||=+|+  |.|..+..+++ .+.+|++++.++...+.+++    .+..    .++..+..+.       
T Consensus        45 i~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~-------  114 (194)
T d1dusa_          45 VENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-------  114 (194)
T ss_dssp             HHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-------
T ss_pred             HHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh-------
Confidence            35667888999999986  56777777765 46799999999887777753    2321    2222221111       


Q ss_pred             HHHhcCCCccEEEeCCC----hh----hHHHHHhcccCCCEEEEE
Q 019196          211 LKARKLKGVDVLYDPVG----GK----LTKESLKLLNWGAQILVI  247 (344)
Q Consensus       211 ~~~~~~~~~d~vid~~g----~~----~~~~~~~~l~~~G~~v~~  247 (344)
                         .....||+|+-...    .+    .+..+.+.|+|+|+++.+
T Consensus       115 ---~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         115 ---VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---hccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               12457999986422    22    356788999999988653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.75  E-value=0.013  Score=43.11  Aligned_cols=83  Identities=16%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCChhh
Q 019196          151 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL  230 (344)
Q Consensus       151 lI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (344)
                      -+.|. |.+|...+..++..+..+.+..++.++.+.+.+.+.....+.  .+.            -...|+||-|+..+.
T Consensus         3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~--~~~------------~~~~DiVil~v~d~~   67 (153)
T d2i76a2           3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATL--EKH------------PELNGVVFVIVPDRY   67 (153)
T ss_dssp             EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSS--CCC------------CC---CEEECSCTTT
T ss_pred             EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccch--hhh------------hccCcEEEEeccchh
Confidence            46788 999988887765533334578999998888766554332221  111            145799999999988


Q ss_pred             HHHHHhcccCCC-EEEEEe
Q 019196          231 TKESLKLLNWGA-QILVIG  248 (344)
Q Consensus       231 ~~~~~~~l~~~G-~~v~~g  248 (344)
                      +...+..++..+ .++.+.
T Consensus        68 i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          68 IKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHHTTTCCSSCCEEECC
T ss_pred             hhHHHhhhcccceeeeecc
Confidence            888888886544 445543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.75  E-value=0.037  Score=42.17  Aligned_cols=88  Identities=18%  Similarity=0.163  Sum_probs=61.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+.++.|.|. |.+|...++.++..|.+|...++........+..+...   ..  +    ..++.     ...|+|..+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~---~~--~----l~~~l-----~~sD~v~~~  107 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTW---HA--T----REDMY-----PVCDVVTLN  107 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEE---CS--S----HHHHG-----GGCSEEEEC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccc---cC--C----HHHHH-----Hhccchhhc
Confidence            4679999999 99999999999999999999998654444444444321   11  1    23332     357899887


Q ss_pred             CCh-h----h-HHHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----L-TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~-~~~~~~~l~~~G~~v~~g  248 (344)
                      ++- +    . -...+..|+++..+|-++
T Consensus       108 ~plt~~T~~li~~~~l~~mk~ga~lIN~a  136 (188)
T d2naca1         108 CPLHPETEHMINDETLKLFKRGAYIVNTA  136 (188)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             ccccccchhhhHHHHHHhCCCCCEEEecC
Confidence            763 1    2 267889998888777654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.72  E-value=0.14  Score=37.06  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=63.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHH--HH-HHHHhcCCcEEEeCCCCCchhh----------------
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAE--KI-KFLKSLGVDHVVDLSNESVIPS----------------  206 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~--~~-~~~~~~g~~~v~~~~~~~~~~~----------------  206 (344)
                      ++|.|+|++|.+|..+..+.+..  ..+|.+.+....  .+ +.++++....++-.++..+...                
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            36999999999999999999987  357776654432  22 3445677776665443221100                


Q ss_pred             HHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEE
Q 019196          207 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  246 (344)
                      .+.+.+......+|+|+.+..+ ..+...+..++.+-++.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence            1122223334568999998754 677777777777766655

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=94.71  E-value=0.092  Score=43.73  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=46.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC----HHHHHHHHh---cCCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----AEKIKFLKS---LGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~----~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      +|||+||+|-+|..++..+...|.+|+++++.    .+.....+.   -+.. .+..+-.+.    +.+.+.....++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~----~~l~~~~~~~~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNE----ALMTEILHDHAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCH----HHHHHHHHHTTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeecCCH----HHHHHHHhccCCCE
Confidence            59999999999999999998899999998642    222222222   2232 223332222    22333333347999


Q ss_pred             EEeCCC
Q 019196          222 LYDPVG  227 (344)
Q Consensus       222 vid~~g  227 (344)
                      ||.+++
T Consensus        77 ViHlAa   82 (338)
T d1udca_          77 VIHFAG   82 (338)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999875

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.63  E-value=0.49  Score=33.95  Aligned_cols=95  Identities=14%  Similarity=0.116  Sum_probs=59.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHH-hcC-CCccEEEeC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA-RKL-KGVDVLYDP  225 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~-~~~d~vid~  225 (344)
                      ++|.|+|+.|.+|...+..++..|++|.+.+++.+........+++.++.......   ....... ... ..=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINL---TLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGG---HHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhh---heeeeecccccccCCceEEEe
Confidence            47999996699999999999999999999999877655555566776665544332   2222222 111 112477788


Q ss_pred             CCh--hhHHHHHhcccCCCEEEEE
Q 019196          226 VGG--KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       226 ~g~--~~~~~~~~~l~~~G~~v~~  247 (344)
                      ++.  +..+.....+.  ++++..
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v~~  108 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVLGL  108 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEEEe
Confidence            764  33344444332  355543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.59  E-value=0.079  Score=39.04  Aligned_cols=96  Identities=19%  Similarity=0.145  Sum_probs=65.8

Q ss_pred             hccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchh
Q 019196          126 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP  205 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  205 (344)
                      .+|+.....+..|.+..---.|++|+|.|.+.-+|.-++.++...|+.|+...+....                      
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~----------------------   73 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN----------------------   73 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC----------------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccch----------------------
Confidence            3455545555444333223468999999999999999999999999998877643321                      


Q ss_pred             hHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                       ..+..     ..+|+++-++|.+.+-. -++++++..++.+|..
T Consensus        74 -l~~~~-----~~ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          74 -LRHHV-----ENADLLIVAVGKPGFIP-GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -HHHHH-----HHCSEEEECSCCTTCBC-TTTSCTTCEEEECCCE
T ss_pred             -hHHHH-----hhhhHhhhhccCccccc-ccccCCCcEEEecCce
Confidence             11111     24799999999754322 3688999999998864

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.051  Score=44.86  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      ++|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999888888999999875

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.52  E-value=0.14  Score=39.83  Aligned_cols=92  Identities=12%  Similarity=0.127  Sum_probs=61.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH---cCCeEEEEecCHHHHHHHHh----cCCcE---EEeCCCCCchhhHHHHHHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKV---CGATIIAVARGAEKIKFLKS----LGVDH---VVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~---~g~~v~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~~~~~~  213 (344)
                      ++++.+||=+|+  |.|..+..+++.   .+++|++++.+++-++.+++    .+...   ....+..++          
T Consensus        37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~----------  104 (225)
T d1im8a_          37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV----------  104 (225)
T ss_dssp             CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC----------
T ss_pred             cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc----------
Confidence            688999999996  668777778775   47899999999987777754    23221   122111111          


Q ss_pred             hcCCCccEEEeCCCh---------hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ....+|+++-+..-         ..++.+.++|+|+|.++...
T Consensus       105 -~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 -EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             -CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence             22456776543221         24678889999999999864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.49  E-value=0.45  Score=35.45  Aligned_cols=88  Identities=20%  Similarity=0.250  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEE-ecCHHHHHHH-HhcCCc---EEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAV-ARGAEKIKFL-KSLGVD---HVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~-~~~~~~~~~~-~~~g~~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      ++.|.|. |.+|...+..++.. +++++++ +++.++.+.+ ++++..   .+++    +    .+++..   ...+|+|
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~----~----~~~ll~---~~~iD~v   70 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG----S----YESLLE---DPEIDAL   70 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES----S----HHHHHH---CTTCCEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC----c----HHHhhh---cccccee
Confidence            5889998 99999888888776 5687755 5566654443 555532   2221    1    344443   3469999


Q ss_pred             EeCCCh-hhHHHHHhcccCCCEEEEEec
Q 019196          223 YDPVGG-KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       223 id~~g~-~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      +.|++. ..++.+..++..+ +=+++..
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g-~~v~~EK   97 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKG-KHILLEK   97 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTT-CEEEECS
T ss_pred             eecccchhhcchhhhhhhcc-ceeeccc
Confidence            999987 4566677777754 5555543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=94.49  E-value=0.29  Score=35.38  Aligned_cols=94  Identities=12%  Similarity=0.087  Sum_probs=61.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHH-HH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-FL---KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~-~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      ..+++|.|. |.+|..+++.+...|.++++++.++++.. .+   ...|.. ++..+..+     .+.++..+-..+|.+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d-----~~~L~~a~i~~a~~v   75 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND-----SSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS-----HHHHHHHTTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcc-----hHHHHHhccccCCEE
Confidence            356899999 99999999999999999999998876432 22   233443 33333322     234444555679999


Q ss_pred             EeCCChhhH----HHHHhcccCCCEEEEE
Q 019196          223 YDPVGGKLT----KESLKLLNWGAQILVI  247 (344)
Q Consensus       223 id~~g~~~~----~~~~~~l~~~G~~v~~  247 (344)
                      +-+++.+..    -...+.+.+.-+++..
T Consensus        76 i~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          76 LALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            999886422    2233455566555543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.016  Score=45.80  Aligned_cols=76  Identities=18%  Similarity=0.240  Sum_probs=46.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      .+++|||+||+|-+|..+++.+...|.  +|+++++++.+...-+.-... ....+-.+    .+++...  -.++|+++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~-~~~~D~~~----~~~~~~~--~~~~d~vi   85 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEK----LDDYASA--FQGHDVGF   85 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGG----GGGGGGG--GSSCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceee-eeeecccc----ccccccc--cccccccc
Confidence            346899999999999999988876675  799999875432211111111 11111111    1222222  24699999


Q ss_pred             eCCCh
Q 019196          224 DPVGG  228 (344)
Q Consensus       224 d~~g~  228 (344)
                      .|++.
T Consensus        86 ~~~~~   90 (232)
T d2bkaa1          86 CCLGT   90 (232)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99874

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.44  E-value=0.086  Score=43.81  Aligned_cols=104  Identities=16%  Similarity=0.218  Sum_probs=63.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcC
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKL  216 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~  216 (344)
                      ..++++++||=.++  +.|..++.+++. |+ +|+.++.+++..+.+++    .|...-+.....+..+......  ..+
T Consensus       141 ~~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~--~~~  215 (324)
T d2as0a2         141 KWVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQ--KKG  215 (324)
T ss_dssp             GGCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH--HTT
T ss_pred             hhcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHH--hcc
Confidence            33678999887765  556566666654 65 89999999998877753    4542111112222211121111  235


Q ss_pred             CCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEecc
Q 019196          217 KGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       217 ~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ..||+|+---+.                ..+..++++|+|+|.++.+...
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            689999853221                1346678899999999987543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.42  E-value=0.1  Score=42.49  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++|||+||+|-+|..++..+...|.+|++++++.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            45699999999999999998888999999998863

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.36  E-value=0.029  Score=46.02  Aligned_cols=38  Identities=24%  Similarity=0.273  Sum_probs=33.3

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCHHH
Q 019196          146 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEK  183 (344)
Q Consensus       146 ~~~~vlI~g~~g--~~G~~~~~~~~~~g~~v~~~~~~~~~  183 (344)
                      .|+++||+|++|  ++|.+.++.+...|++|+++.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            578999999865  89999999999999999999886543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.35  E-value=0.042  Score=38.23  Aligned_cols=39  Identities=21%  Similarity=0.336  Sum_probs=34.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ..++..++|+|.|+ |.+|+-++..++.+|.+|+++.+++
T Consensus        17 ~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             hccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            34555689999999 9999999999999999999999864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.019  Score=36.68  Aligned_cols=34  Identities=32%  Similarity=0.435  Sum_probs=30.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++|.|+|+ |-+|.+.++.++.+|.++.+.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999999 99999999999999999999997654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.19  E-value=0.12  Score=43.05  Aligned_cols=75  Identities=19%  Similarity=0.154  Sum_probs=46.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----HHHHHHH---HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----AEKIKFL---KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~----~~~~~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      +.|||+||+|-+|..++..+...|.+|+++++.    .+.....   ..-+... +..+-.+    .+.+.......++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~-~~~Dl~d----~~~l~~~~~~~~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPF-YEVDLCD----RKGLEKVFKEYKID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCE-EECCTTC----HHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeE-EEeecCC----HHHHHHHHhccCCC
Confidence            579999999999999998888889999998642    1111212   2223322 2222222    23333333334799


Q ss_pred             EEEeCCC
Q 019196          221 VLYDPVG  227 (344)
Q Consensus       221 ~vid~~g  227 (344)
                      +||.+++
T Consensus        77 ~VihlAa   83 (347)
T d1z45a2          77 SVIHFAG   83 (347)
T ss_dssp             EEEECCS
T ss_pred             EEEEccc
Confidence            9999876

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.12  E-value=0.071  Score=37.32  Aligned_cols=42  Identities=14%  Similarity=0.218  Sum_probs=35.0

Q ss_pred             HHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          139 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       139 ~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .+...-...++|+|.|+ |.+|+-+++.++.+|.+|+++.+.+
T Consensus        22 ~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          22 KQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            34444456789999999 9999999999999999999998764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.16  Score=37.58  Aligned_cols=95  Identities=16%  Similarity=0.139  Sum_probs=67.1

Q ss_pred             hccchHHHHHHHHHHhcCC-CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCch
Q 019196          126 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI  204 (344)
Q Consensus       126 ~l~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  204 (344)
                      .+|+.....+..|. ..++ -.|++|.|.|.+.-+|.-++.++...|+.|+..........                   
T Consensus        18 ~~PcTp~aii~lL~-~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~-------------------   77 (170)
T d1a4ia1          18 FIPCTPKGCLELIK-ETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------   77 (170)
T ss_dssp             CCCHHHHHHHHHHH-TTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCChHHHHHHHHH-HhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH-------------------
Confidence            35555555555553 3343 37899999999999999999999999999998775432111                   


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCChhhHHHHHhcccCCCEEEEEecc
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                          +.   +  +..|+++-++|.+.+-. -++++++-.++++|..
T Consensus        78 ----~~---~--~~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          78 ----EE---V--NKGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ----HH---H--TTCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             ----HH---H--hhccchhhccccccccc-cccccCCCeEeccCcc
Confidence                11   1  35789998888755422 4688999999998854

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.76  E-value=0.44  Score=34.88  Aligned_cols=89  Identities=12%  Similarity=0.184  Sum_probs=55.7

Q ss_pred             EEEEecCCChHHHH-HHHHHHHc-CCeEEEEecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          149 VLLVLGAAGGVGVA-AVQIGKVC-GATIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~-~~~~~~~~-g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +|.|.|+ |.+|.. ....++.. +.++++.+.++++.+.+ ++++....+  .  ++    +++.   . ..+|+|+.|
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~--~~----~~ll---~-~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC--T--DY----RDVL---Q-YGVDAVMIH   69 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC--S--ST----TGGG---G-GCCSEEEEC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc--c--cH----HHhc---c-cccceeccc
Confidence            5889998 999854 45555555 55777777887776655 456654332  1  11    1111   1 358999999


Q ss_pred             CChh-hHHHHHhcccCCCEEEEEeccC
Q 019196          226 VGGK-LTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       226 ~g~~-~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      ++.. ..+.+..++..+ +=+++..+.
T Consensus        70 tp~~~H~~~~~~al~~g-k~V~~EKP~   95 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLG-IPTFVDKPL   95 (167)
T ss_dssp             SCGGGHHHHHHHHHHTT-CCEEEESCS
T ss_pred             ccccccccccccccccc-cccccCCCC
Confidence            9874 556666666654 546665443

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.69  E-value=0.057  Score=37.38  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=31.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .++++|+|+ |.+|+-+++.+..+|.+|+++.+.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999999 99999999999999999999997653

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.62  E-value=1.4  Score=35.37  Aligned_cols=109  Identities=13%  Similarity=0.217  Sum_probs=70.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec---CHHHHHHHHhcCCcEEEeCCCCCch------------
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVVDLSNESVI------------  204 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~---~~~~~~~~~~~g~~~v~~~~~~~~~------------  204 (344)
                      +...+++..+| |...+|..|++++..++.+|.+++++..   ++.+.+.++.+|+..+....+....            
T Consensus        53 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSEE-EEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCcee-eeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            44556666654 4455599999999999999997666554   4567788889998654432211110            


Q ss_pred             -------------------h-hHHHHHHHhcCCCccEEEeCCChh----hHHHHHhcccCCCEEEEEecc
Q 019196          205 -------------------P-SVKEFLKARKLKGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       205 -------------------~-~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~~  250 (344)
                                         . ...++.+..+ ..+|.++-++|+.    .+...++...+..+++.+...
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~-~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep~  200 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTG-GRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPE  200 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTT-TCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEEC
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcC-CCCCcccccCCCccchhhhhhhhhhccCcceEEEeccc
Confidence                               0 1233333333 3589999888752    345677778888888777643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.58  E-value=0.081  Score=44.49  Aligned_cols=75  Identities=17%  Similarity=0.190  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+-+|||+||+|-+|..++..+...|.+|+++++..... .............+-.+    .+.+....  .++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~D~~~----~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-MTEDMFCDEFHLVDLRV----MENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-SCGGGTCSEEEECCTTS----HHHHHHHH--TTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-hhhhcccCcEEEeechh----HHHHHHHh--hcCCeEeec
Confidence            467899999999999999999998999999987653321 11122222333333332    23333333  478999998


Q ss_pred             CC
Q 019196          226 VG  227 (344)
Q Consensus       226 ~g  227 (344)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.58  E-value=0.029  Score=42.68  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=30.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~  181 (344)
                      +++|+|+|| |..|+.++..|+..|+ .|+++++++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            568999999 9999999999999999 588988764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.53  E-value=0.77  Score=34.35  Aligned_cols=84  Identities=14%  Similarity=0.222  Sum_probs=59.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..++++++..|++|++.++.....       ........  +    ++++..     ..|++..+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-------~~~~~~~~--~----l~ell~-----~sDii~i~  103 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLP-------LGNATQVQ--H----LSDLLN-----MSDVVSLH  103 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCC-------CTTCEECS--C----HHHHHH-----HCSEEEEC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccch-------hhhhhhhh--h----HHHHHh-----hccceeec
Confidence            4679999999 9999999999999999999998753311       01111111  1    444443     36899888


Q ss_pred             CCh-h----h-HHHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----L-TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~-~~~~~~~l~~~G~~v~~g  248 (344)
                      ++- +    . -.+.++.|+++..+|.++
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  132 (188)
T d1sc6a1         104 VPENPSTKNMMGAKEISLMKPGSLLINAS  132 (188)
T ss_dssp             CCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred             ccCCcchhhhccHHHHhhCCCCCEEEEcC
Confidence            763 1    2 267889999988888764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.44  E-value=0.32  Score=36.02  Aligned_cols=97  Identities=14%  Similarity=0.098  Sum_probs=56.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEecC--HHHHHHHHhcCCcEEEeCCCCCchhhHH--------HHHHHhcCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARG--AEKIKFLKSLGVDHVVDLSNESVIPSVK--------EFLKARKLK  217 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~--~~~~~~~~~~g~~~v~~~~~~~~~~~~~--------~~~~~~~~~  217 (344)
                      +|.|.|- |.+|..+.+.+...+ .+++++...  ......+...+.+......+...  ...        ++.+..  .
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~v~g~~~~~~--~   77 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVK--LFEKAGIEVAGTVDDML--D   77 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHH--HHHHTTCCCCEEHHHHH--H
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccce--eecccCcccCCChhHhh--c
Confidence            6899998 999999998876655 466655432  23445555666554332211100  000        001111  3


Q ss_pred             CccEEEeCCCh-hhHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++|+|+||+|. ...+.+-..+..+-+++..+..
T Consensus        78 ~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            68999999997 3345566677777787776543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.44  E-value=0.081  Score=36.89  Aligned_cols=38  Identities=21%  Similarity=0.417  Sum_probs=34.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ++++++++|.|+ |.+|.-++..++..|.+|+++.+++.
T Consensus        27 ~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            567899999999 99999999999999999999998753

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.44  E-value=0.17  Score=36.40  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=30.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKI  184 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~  184 (344)
                      .+|.|.||+|.+|..++.++...+.  ++...+.++.+.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~   39 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG   39 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch
Confidence            3689999889999999999988776  688888766543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.40  E-value=0.082  Score=44.02  Aligned_cols=75  Identities=19%  Similarity=0.098  Sum_probs=45.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|||+||+|-+|..+++.+...| .+|++++....+........--..+..+-.+..+ ..+..  .  .++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~-~~~~~--~--~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE-WIEYH--V--KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSH-HHHHH--H--HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHH-HHHHH--H--hCCCccccccc
Confidence            59999999999999998777777 5899988765544333222111223322112111 22211  1  25899999887


Q ss_pred             h
Q 019196          228 G  228 (344)
Q Consensus       228 ~  228 (344)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.37  E-value=0.19  Score=40.87  Aligned_cols=94  Identities=16%  Similarity=0.133  Sum_probs=61.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcC---------Cc-EEEeCCCCCchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG---------VD-HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..++|||+|+  |-|..+-.+++..+. +|++++.+++-.+.++++-         .. .++..   +    ..+..+.+
T Consensus        80 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~---D----a~~~l~~~  150 (290)
T d1xj5a_          80 NPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG---D----GVAFLKNA  150 (290)
T ss_dssp             CCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES---C----HHHHHHTS
T ss_pred             CCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc---c----HHHHHhhc
Confidence            4578999996  446666778887665 8999999988777776532         11 11111   1    23344444


Q ss_pred             cCCCccEEE-eCCCh----------hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ..+.||+|| |+...          +.++.+.+.|+++|.++.=.
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            456899886 44431          24578889999999998743

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.36  E-value=0.18  Score=37.77  Aligned_cols=82  Identities=13%  Similarity=0.069  Sum_probs=48.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHHHhcCCcEEEe--CCC--CCchhhHHHHHHHhcCCCccEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVD--LSN--ESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g~~~v~~--~~~--~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      +|.|+|+ |.+|.+.+..+...|.+|....+..+  ..+...+-+.+..+.  ...  .......++.   .  ...|+|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~---~--~~ad~I   75 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC---L--ENAEVV   75 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH---H--TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHH---H--hccchh
Confidence            5889999 99999999999888999999887433  233333221110000  000  0001112222   1  468999


Q ss_pred             EeCCChhhHHHHHh
Q 019196          223 YDPVGGKLTKESLK  236 (344)
Q Consensus       223 id~~g~~~~~~~~~  236 (344)
                      +.++....+...++
T Consensus        76 i~avps~~~~~~~~   89 (180)
T d1txga2          76 LLGVSTDGVLPVMS   89 (180)
T ss_dssp             EECSCGGGHHHHHH
T ss_pred             hcccchhhhHHHHH
Confidence            99999866554443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.32  E-value=0.045  Score=43.63  Aligned_cols=34  Identities=18%  Similarity=0.250  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++|+|+|| |..|++++..++..|.+|+++++++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999999 9999999999999999999998753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.22  E-value=0.33  Score=33.86  Aligned_cols=92  Identities=10%  Similarity=0.138  Sum_probs=62.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      ++++|.|. |.+|..+++.++  +..+++++.++++.+.++..|... +..+..+     .+.++..+-..++.++-+++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~-i~Gd~~~-----~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANF-VHGDPTR-----VSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEE-EESCTTS-----HHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccc-cccccCC-----HHHHHHhhhhcCcEEEEecc
Confidence            35889998 999998888775  456888898888888888888654 3333322     24444455567899998887


Q ss_pred             hhh----HHHHHhcccCCCEEEEEe
Q 019196          228 GKL----TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       228 ~~~----~~~~~~~l~~~G~~v~~g  248 (344)
                      .+.    .-...+.+.|..+++...
T Consensus        72 ~d~~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          72 SDSETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             SHHHHHHHHHHHHHHCSSSCEEEEC
T ss_pred             chhhhHHHHHHHHHHCCCceEEEEE
Confidence            642    233445667776666543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.20  E-value=0.073  Score=37.18  Aligned_cols=34  Identities=18%  Similarity=0.286  Sum_probs=31.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++|+|+ |.+|+-.++.+..+|++|+++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            478999999 9999999999999999999999864

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.20  E-value=0.57  Score=34.79  Aligned_cols=135  Identities=16%  Similarity=0.027  Sum_probs=74.2

Q ss_pred             EEEEecCCChHHHH-HHHHHHHcC--CeEEE-EecCHHHHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVA-AVQIGKVCG--ATIIA-VARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~-~~~~~~~~g--~~v~~-~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|.|. |.+|.- ....++..+  .++++ .++++++.+.+ ++++...+++    +    .+++++   ...+|+|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~----~----~~ell~---~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----S----YEELLE---SGLVDAVD   72 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----C----HHHHHH---SSCCSEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee----e----eecccc---ccccceee
Confidence            6889998 999864 466666543  36665 45556665544 5677655442    1    344433   35699999


Q ss_pred             eCCChh-hHHHHHhcccCCCEEEEEeccCCCCCCcchhh---hh-ccceEE-EEEEeccccccCchhHHHHHHHHHHHHH
Q 019196          224 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANI---AL-VKNWTV-HGLYWGSYKIHRPHVLEDSLRELLLWAA  297 (344)
Q Consensus       224 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~---~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~  297 (344)
                      .|++.. +.+.+..++.. |+=+++..+..... .....   +. .++..+ .+... ++   .  .....+..+.++++
T Consensus        73 I~tp~~~h~~~~~~al~~-gk~V~~EKPl~~~~-~e~~~l~~~~~~~~~~~~v~~~~-R~---~--~~~~~~~~~~~~i~  144 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRK-GVHVICEKPISTDV-ETGKKVVELSEKSEKTVYIAENF-RE---N--SYQKEFEDFYQVVA  144 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSSSSH-HHHHHHHHHHHHCSSCEEEECGG-GC---C--HHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccc-chhhhcCCCCcCCH-HHHHHHHHHHHHhCCeEEEEeec-cc---c--ccCHHHHHHHHHHH
Confidence            999874 45556566665 56666665432111 11111   11 122222 22111 11   1  12456778888899


Q ss_pred             CCceeE
Q 019196          298 KGLITI  303 (344)
Q Consensus       298 ~g~i~~  303 (344)
                      +|++..
T Consensus       145 ~G~ig~  150 (181)
T d1zh8a1         145 EGKPND  150 (181)
T ss_dssp             SCCCCS
T ss_pred             CCCCcc
Confidence            888753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.20  E-value=0.15  Score=39.84  Aligned_cols=47  Identities=21%  Similarity=0.247  Sum_probs=40.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH-hcCCc
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD  193 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~  193 (344)
                      .+.+|+|.|- |.+|..+++.+...|+++++++.+..+...+. ..|+.
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            5789999999 99999999999999999999999988877664 45543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.18  E-value=0.52  Score=33.82  Aligned_cols=37  Identities=30%  Similarity=0.372  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEK  183 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~  183 (344)
                      .+.+|.|.|+ |.+|..++..+...+.  ++...+.++++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4568999998 9999999988877664  79999988765

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.15  E-value=0.15  Score=40.29  Aligned_cols=89  Identities=15%  Similarity=0.078  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      ++++||=+|+  |.|..+..+++ .|.+|++++.|++-++.|++    .+...-+...+  .       ......+.||+
T Consensus        37 ~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d--~-------~~~~~~~~fD~  104 (246)
T d1y8ca_          37 VFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD--I-------SNLNINRKFDL  104 (246)
T ss_dssp             CTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC--G-------GGCCCSCCEEE
T ss_pred             CCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccc--h-------hhhcccccccc
Confidence            4578999997  45777777766 58899999999987766643    34322221111  1       11112457999


Q ss_pred             EEeCCCh-----------hhHHHHHhcccCCCEEEE
Q 019196          222 LYDPVGG-----------KLTKESLKLLNWGAQILV  246 (344)
Q Consensus       222 vid~~g~-----------~~~~~~~~~l~~~G~~v~  246 (344)
                      |+...+.           ..++.+.++|+|+|.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9864332           135778899999999885

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.04  E-value=0.073  Score=36.79  Aligned_cols=34  Identities=24%  Similarity=0.156  Sum_probs=31.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++|.|+ |.+|+-+++.++.+|.+|+++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            468999999 9999999999999999999999874

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.91  E-value=0.09  Score=36.50  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ..++++|+|+ |.+|+-.++.++.+|.+|+++.+++
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3478999999 9999999999999999999999764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.85  E-value=0.05  Score=44.29  Aligned_cols=34  Identities=26%  Similarity=0.353  Sum_probs=30.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +++|+|+|+ |..|+.++..++..|.+|++++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            478999999 9999999999999999999998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.78  E-value=0.07  Score=37.36  Aligned_cols=36  Identities=25%  Similarity=0.355  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ..++++|+|+ |-+|+-.++.++.+|.+|+++.+++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4578999999 99999999999999999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.67  E-value=0.15  Score=36.16  Aligned_cols=39  Identities=21%  Similarity=0.334  Sum_probs=34.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ..++++++++|+|+ |.+|+-++..++..|.+|+++.+.+
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            34567789999999 9999999999999999999999864

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.48  E-value=0.15  Score=42.39  Aligned_cols=33  Identities=18%  Similarity=0.224  Sum_probs=29.6

Q ss_pred             EE-EEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VL-LVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~v-lI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +| ||+||+|-+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            47 9999999999999998888999999999854

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.43  E-value=2.2  Score=35.30  Aligned_cols=109  Identities=24%  Similarity=0.294  Sum_probs=70.7

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC---HHHHHHHHhcCCcEEEeCCCC------Cc-------
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---AEKIKFLKSLGVDHVVDLSNE------SV-------  203 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~~~~g~~~v~~~~~~------~~-------  203 (344)
                      +...+++.+.| |...+|..|.+++..|+.+|.+.+++...   ++|.+.++.+|++.+......      ..       
T Consensus        90 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceE-EEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            45556666654 45555999999999999999976665543   568888899998755421100      00       


Q ss_pred             -----------------------hhhHHHHHHHhcCCCccEEEeCCChh----hHHHHHhcccCCCEEEEEecc
Q 019196          204 -----------------------IPSVKEFLKARKLKGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       204 -----------------------~~~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~~  250 (344)
                                             .....++.+..++ .+|.++-++|+.    .+...++...+.-+++.+...
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~-~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~  241 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDG-KLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPE  241 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCC-CCCeeEecccCCchHHHHHHHHhhcCCcceEEeeccc
Confidence                                   0012344444443 489999999862    335566677788888877643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.40  E-value=0.088  Score=36.26  Aligned_cols=34  Identities=26%  Similarity=0.313  Sum_probs=30.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++|.|+ |.+|+-+++.++.+|++|+++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            378999999 9999999999999999999998764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.32  E-value=0.43  Score=35.52  Aligned_cols=96  Identities=16%  Similarity=0.134  Sum_probs=53.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEecC-H-HHHHHHHhcCCcEEEeCCC--------CCchhhHHHHHHHhcCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARG-A-EKIKFLKSLGVDHVVDLSN--------ESVIPSVKEFLKARKLK  217 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~-~-~~~~~~~~~g~~~v~~~~~--------~~~~~~~~~~~~~~~~~  217 (344)
                      +|.|.|- |.+|..+.+.+.... .+++++... + .....+...+.......+.        ...........     .
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            5899997 999999999888664 577776543 2 2333333333221111000        00000011111     2


Q ss_pred             CccEEEeCCChh-hHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      ++|+|+||+|.- ..+.+-.+++.+-+++..+..
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            589999999973 344555666666677765443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.28  E-value=0.085  Score=36.84  Aligned_cols=33  Identities=21%  Similarity=0.213  Sum_probs=29.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .++++|+|+ |.+|+-.++.++.+|.+|+++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357999999 999999999999999999999764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.22  E-value=0.32  Score=40.03  Aligned_cols=100  Identities=15%  Similarity=0.163  Sum_probs=58.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCcc
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      .++++||=.++  +.|..++++++ .+.+|++++.+++..+.+++    .|.+.+ ..-..+..+..+...  ..+..||
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~-~~i~~d~~~~~~~~~--~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNV-RVLEANAFDLLRRLE--KEGERFD  217 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTE-EEEESCHHHHHHHHH--HTTCCEE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCc-ceeeccHHHHhhhhH--hhhcCCC
Confidence            46888887765  33444555554 35699999999998887753    454321 111112211122111  2356799


Q ss_pred             EEEeCCC-----h-----------hhHHHHHhcccCCCEEEEEecc
Q 019196          221 VLYDPVG-----G-----------KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       221 ~vid~~g-----~-----------~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      +|+---+     .           ..+..++++|+|+|.++.....
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            9984221     1           1345678899999999887643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.37  Score=39.40  Aligned_cols=96  Identities=19%  Similarity=0.324  Sum_probs=56.0

Q ss_pred             HHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHH---HHHhcCCc---EEEeCCCCCchhhHHHH
Q 019196          138 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK---FLKSLGVD---HVVDLSNESVIPSVKEF  210 (344)
Q Consensus       138 l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~---~~~~~g~~---~v~~~~~~~~~~~~~~~  210 (344)
                      +.+.....++++||-+|+  |.|+++..+|+ .|+ +|++++.++.-..   ..++.+..   .++..+..+..      
T Consensus        27 i~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~------   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH------   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC------
T ss_pred             HHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc------
Confidence            444455678999999997  36777776666 476 8999998865322   12233321   23333322220      


Q ss_pred             HHHhcCCCccEEEeC-CCh----h-hH----HHHHhcccCCCEEE
Q 019196          211 LKARKLKGVDVLYDP-VGG----K-LT----KESLKLLNWGAQIL  245 (344)
Q Consensus       211 ~~~~~~~~~d~vid~-~g~----~-~~----~~~~~~l~~~G~~v  245 (344)
                         .....+|+|+-. .+.    + ..    ...-+.|+|+|+++
T Consensus        98 ---~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 ---LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             ---CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ---CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence               123579999752 222    1 22    22346899999886

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.18  E-value=0.088  Score=43.32  Aligned_cols=44  Identities=20%  Similarity=0.191  Sum_probs=34.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH--HHHHHHhcC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLG  191 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~g  191 (344)
                      ++|||+|++|-+|..++..+...|++|+++++...  ....++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc
Confidence            47999999999999999988778999999987543  234444444

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.16  E-value=0.99  Score=32.28  Aligned_cols=39  Identities=13%  Similarity=0.170  Sum_probs=31.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK  188 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~  188 (344)
                      +|-|+|. |.+|...+.-+...|.+|++..+.+++....+
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            5788898 99999999999889999988887765554443

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.13  E-value=0.087  Score=41.36  Aligned_cols=37  Identities=22%  Similarity=0.329  Sum_probs=32.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      ...++|+|+|+ |..|+.++..++..|.+|++++.+++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            45689999999 99999999999999999999987643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.12  E-value=0.56  Score=38.72  Aligned_cols=76  Identities=16%  Similarity=0.120  Sum_probs=47.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----------HHHHHHHHhc--CCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG----------AEKIKFLKSL--GVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~----------~~~~~~~~~~--g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ++|||+||+|-+|..++..+-..|.+|+++++.          .+.....+.+  .--.++..+-.+    .+.+.+...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~l~~~~~   78 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD----QGALQRLFK   78 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC----HHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccc----ccccccccc
Confidence            689999999999999999888889999998631          1222322222  112334333233    233333333


Q ss_pred             CCCccEEEeCCC
Q 019196          216 LKGVDVLYDPVG  227 (344)
Q Consensus       216 ~~~~d~vid~~g  227 (344)
                      +...|+++.+++
T Consensus        79 ~~~~~~i~h~Aa   90 (346)
T d1ek6a_          79 KYSFMAVIHFAG   90 (346)
T ss_dssp             HCCEEEEEECCS
T ss_pred             cccccccccccc
Confidence            456888888765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=92.08  E-value=0.35  Score=37.44  Aligned_cols=95  Identities=17%  Similarity=0.070  Sum_probs=60.0

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCc--EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD--HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ...+.-.+.+||=+|+  |.|..+..+++ .|.+|++++.+++-.+.+++...+  ..+..+-.+.          ....
T Consensus        14 ~~~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~----------~~~~   80 (225)
T d2p7ia1          14 AFTPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA----------QLPR   80 (225)
T ss_dssp             HHGGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC----------CCSS
T ss_pred             HhhhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccccc----------cccc
Confidence            3444456678999986  55777766654 588999999999988888754222  2222211111          1235


Q ss_pred             CccEEEeCCCh-------hhHHHHH-hcccCCCEEEEE
Q 019196          218 GVDVLYDPVGG-------KLTKESL-KLLNWGAQILVI  247 (344)
Q Consensus       218 ~~d~vid~~g~-------~~~~~~~-~~l~~~G~~v~~  247 (344)
                      .||+|+-.---       ..+.... ++|+|+|.++..
T Consensus        81 ~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          81 RYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            79999853221       1245555 689999988875

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.04  E-value=0.74  Score=34.99  Aligned_cols=93  Identities=15%  Similarity=0.118  Sum_probs=60.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      ..||=+|+  |.|..++.+|+.. +..+++++.+......+    ++.+.+.+.-... +.    ..+........+|.|
T Consensus        31 PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~-Da----~~l~~~~~~~~~d~v  103 (204)
T d2fcaa1          31 PIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI-DA----DTLTDVFEPGEVKRV  103 (204)
T ss_dssp             CEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC-CG----GGHHHHCCTTSCCEE
T ss_pred             ceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc-ch----hhhhcccCchhhhcc
Confidence            35666675  7788899999876 67999999998876655    3456543322221 11    123333445568877


Q ss_pred             EeCCCh---------------hhHHHHHhcccCCCEEEEE
Q 019196          223 YDPVGG---------------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       223 id~~g~---------------~~~~~~~~~l~~~G~~v~~  247 (344)
                      +-....               +.++.+.+.|+|+|.+...
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            654432               2457788999999998775

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=0.06  Score=39.80  Aligned_cols=90  Identities=21%  Similarity=0.189  Sum_probs=55.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcC----C----cEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLG----V----DHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g----~----~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      +|.|+|++|.+|.++++++... ++++++...++.....-+.+|    .    ..+.+ +....            ...+
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~-~~~~~------------~~~~   72 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQS-SLDAV------------KDDF   72 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEES-CSTTT------------TTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeec-cHHHH------------hccc
Confidence            6899999999999999988765 667665543322111101111    0    01111 11111            2468


Q ss_pred             cEEEeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          220 DVLYDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      |+++|.+..+.....++.....|.=+.+|-++
T Consensus        73 DViIDFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          73 DVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             ceEEEeccHHHHHHHHHHHHhccceeEEecCC
Confidence            99999999888777777777777777777444

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.00  E-value=0.075  Score=39.83  Aligned_cols=42  Identities=17%  Similarity=0.067  Sum_probs=36.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG  191 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g  191 (344)
                      +|-|.|. |.+|...+.-+...|++|++.++++++.+.+.+.+
T Consensus         3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            3778899 99999999888888999999999999988776554

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.00  E-value=0.11  Score=36.38  Aligned_cols=34  Identities=21%  Similarity=0.230  Sum_probs=31.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++++|+|+ |.+|+-++..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378999999 9999999999999999999999864

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.91  E-value=0.23  Score=38.41  Aligned_cols=96  Identities=13%  Similarity=0.042  Sum_probs=64.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc----CCc--EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL----GVD--HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----g~~--~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ..++.+||=+|+  |.|..+..+++..+.+|++++.+++-.+.+++.    +..  .....+-.++         .....
T Consensus        58 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~---------~~~~~  126 (222)
T d2ex4a1          58 KTGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF---------TPEPD  126 (222)
T ss_dssp             CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC---------CCCSS
T ss_pred             CCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccc---------ccccc
Confidence            466789999986  678888888777777999999999888877653    221  1222221111         01235


Q ss_pred             CccEEEeCCC-----h----hhHHHHHhcccCCCEEEEEecc
Q 019196          218 GVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       218 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      .||+|+....     .    ..+..+.+.|+|+|.++.....
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~~  168 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM  168 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEcc
Confidence            7999986432     2    2456778999999999886543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.87  E-value=0.31  Score=35.38  Aligned_cols=91  Identities=19%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCHHHHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCCccE
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDV  221 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~---~v~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (344)
                      |-+|.|+||+|-+|.-.++++..+..   ++....++...-... ......  ..+..+.+             ....|+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~-~~~~~~~~~~~~~~~~-------------~~~~d~   66 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL-KFKDQDITIEETTETA-------------FEGVDI   66 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEE-EETTEEEEEEECCTTT-------------TTTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccc-cccCCcccccccchhh-------------hhhhhh
Confidence            34799999999999999999987743   444444332111000 011111  11122222             246899


Q ss_pred             EEeCCChhhH-HHHHhcccCCCEEEEEeccC
Q 019196          222 LYDPVGGKLT-KESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       222 vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +|-|.+.... +.......++-++++.+..-
T Consensus        67 ~f~~~~~~~s~~~~~~~~~~~~~VIDlSsdf   97 (154)
T d2gz1a1          67 ALFSAGSSTSAKYAPYAVKAGVVVVDNTSYF   97 (154)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             hhhccCccchhhHHhhhccccceehhcChhh
Confidence            9999987544 44556777788888877543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.78  E-value=0.33  Score=39.25  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=60.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcC---------Cc-EEEeCCCCCchhhHHHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG---------VD-HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...++|||+|+  |-|..+-.+++..+. +|++++-+++=.+.++++-         .. .++.   .+    ..+.++.
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~---~D----a~~~l~~  147 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GD----GFEFMKQ  147 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SC----HHHHHHT
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE---cc----HHHHHhc
Confidence            34578999996  446667777777654 8999999988777776532         11 1111   11    3344444


Q ss_pred             hcCCCccEEE-eCCCh----------hhHHHHHhcccCCCEEEEEe
Q 019196          214 RKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       214 ~~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      + ...||+|+ |....          +.++.+.+.|+++|.++.-.
T Consensus       148 ~-~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         148 N-QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             C-SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             C-CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            3 45799997 44321          24577889999999988743

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.76  E-value=0.13  Score=40.58  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=31.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      +..++|+|+|+ |..|++++..+...|.+|+++++.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            45568999999 999999999999999999999974

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.71  E-value=0.44  Score=37.56  Aligned_cols=92  Identities=15%  Similarity=0.136  Sum_probs=59.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh----cCCc-EE--EeCCC--CCchhhHHHHHHHh
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--VDLSN--ESVIPSVKEFLKAR  214 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~g~~-~v--~~~~~--~~~~~~~~~~~~~~  214 (344)
                      ++++++||=+|+  |.|..+..+++.-..+|++++.+++-++.|++    .+.. .+  ...+.  ...          .
T Consensus        22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~   89 (252)
T d1ri5a_          22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------D   89 (252)
T ss_dssp             CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------C
T ss_pred             CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------c
Confidence            578999999997  44666677777644589999999998777753    3322 11  11111  111          1


Q ss_pred             cCCCccEEEeCCChh-----------hHHHHHhcccCCCEEEEE
Q 019196          215 KLKGVDVLYDPVGGK-----------LTKESLKLLNWGAQILVI  247 (344)
Q Consensus       215 ~~~~~d~vid~~g~~-----------~~~~~~~~l~~~G~~v~~  247 (344)
                      ....||+|+..-.-.           .+..+.+.|+|+|.++..
T Consensus        90 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          90 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            235699997643321           345567899999998764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.68  E-value=0.13  Score=35.95  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ..++++|+|+ |.+|+-.++.++.+|.+|+++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3578999999 9999999999999999999998764

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.66  E-value=0.61  Score=38.04  Aligned_cols=96  Identities=17%  Similarity=0.079  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcC-Cc-EEEe-----CCCCCchhhHHHHHHHhcCC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLG-VD-HVVD-----LSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g-~~-~v~~-----~~~~~~~~~~~~~~~~~~~~  217 (344)
                      ..++|||+|+  |-|..+-.+++.... +|++++.+++=.+.++++- .. ..++     ....+    ..+.++.+ ..
T Consensus       106 ~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~D----a~~~l~~~-~~  178 (312)
T d2b2ca1         106 DPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD----GFEFLKNH-KN  178 (312)
T ss_dssp             SCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC----HHHHHHHC-TT
T ss_pred             CCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEch----HHHHHHhC-CC
Confidence            4578999996  456667788887664 8999999998888887642 10 0000     01112    33444443 46


Q ss_pred             CccEEEeCCCh-----------hhHHHHHhcccCCCEEEEEe
Q 019196          218 GVDVLYDPVGG-----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       218 ~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      .||+||--...           +.++.+.+.|+++|.++.-+
T Consensus       179 ~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         179 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             CEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            79999843221           23577888999999998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.64  E-value=0.08  Score=38.44  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      .+++|||.|| |.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5789999999 99999999999889999998864

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=91.60  E-value=0.16  Score=40.89  Aligned_cols=93  Identities=19%  Similarity=0.164  Sum_probs=61.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhc-----CC--c---EEEeCCCCCchhhHHHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSL-----GV--D---HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~-----g~--~---~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ...++|||+|+  |-|..+..+++..+. +|++++.+++=.+.++++     ++  +   .++.   .+.    .+.++.
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~---~D~----~~~l~~  144 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDG----FMHIAK  144 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCS----HHHHHT
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe---chH----HHHHhh
Confidence            34578999996  557777788887665 899999999877777653     21  1   1221   122    233333


Q ss_pred             hcCCCccEEE-eCCCh----------hhHHHHHhcccCCCEEEEE
Q 019196          214 RKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       214 ~~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~  247 (344)
                      + ...+|+|+ |....          +.++.+.+.|+++|.++.=
T Consensus       145 ~-~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         145 S-ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             C-CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             c-CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            3 45799997 43221          2467888999999998864

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=91.51  E-value=0.16  Score=38.14  Aligned_cols=90  Identities=20%  Similarity=0.158  Sum_probs=54.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|+|++|-+|+-.++++..+ ..++..+.++...-+...+    +.....  .......        .....+.|++|
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~Dvvf   76 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDL--PNLVAVK--------DADFSNVDAVF   76 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCC--CCCBCGG--------GCCGGGCSEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcccccccccccccc--ccchhhh--------hhhhcccceee
Confidence            7899999999999999999876 4466655443321111111    111100  0000000        00124689999


Q ss_pred             eCCChhhHHHHHhcccCCCEEEEEe
Q 019196          224 DPVGGKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      -|.+..........+...+.++...
T Consensus        77 ~alp~~~s~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          77 CCLPHGTTQEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             ECCSSSHHHHHHHTSCSSCEEEECS
T ss_pred             eccccchHHHHHHHHHhcCcccccc
Confidence            9999877777777788888887654

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.33  Score=38.96  Aligned_cols=103  Identities=23%  Similarity=0.180  Sum_probs=59.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-----C--CeEEEEecCHHHHHHHHhc-C-----CcEEEeCCCCCchhhHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVC-----G--ATIIAVARGAEKIKFLKSL-G-----VDHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~-----g--~~v~~~~~~~~~~~~~~~~-g-----~~~v~~~~~~~~~~~~~~~~  211 (344)
                      +++-+||=+|+  |.|..+..+++.+     +  .++++++.++.-++.+++. .     ....++.......+......
T Consensus        39 ~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          39 KSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             CSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            44447898886  4455555554432     2  3678999988877777542 1     11223333332211111111


Q ss_pred             HHhcCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .......||+|+-.-.-       ..+..+.++|+|+|.++....
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            12245679999864431       356788899999998877653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=91.49  E-value=0.54  Score=37.77  Aligned_cols=95  Identities=11%  Similarity=0.125  Sum_probs=64.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCHHHHHHHHh----cCCcEEEeC-CCCCchhhHHHHHHHh
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDL-SNESVIPSVKEFLKAR  214 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~--g~~v~~~~~~~~~~~~~~~----~g~~~v~~~-~~~~~~~~~~~~~~~~  214 (344)
                      .++.++.+||=+|+  |.|..+..+++..  +++|++++.+++-.+.+++    .+.+..+.. +....          .
T Consensus        23 ~~~~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~----------~   90 (281)
T d2gh1a1          23 WKITKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI----------E   90 (281)
T ss_dssp             SCCCSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC----------C
T ss_pred             hccCCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc----------c
Confidence            35677789998886  4688888888765  5799999999887777753    343322221 11111          1


Q ss_pred             cCCCccEEEeCCCh-------hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      ....||+|+-...-       ..++.+.+.|+|+|.++...
T Consensus        91 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          91 LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            13469999864331       34678889999999998765

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.48  E-value=0.034  Score=40.40  Aligned_cols=88  Identities=16%  Similarity=0.110  Sum_probs=48.6

Q ss_pred             EEEEecCCChHHHHHHH-HHHHc---CCeEEEEecCHHHHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQ-IGKVC---GATIIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~-~~~~~---g~~v~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|+||+|-+|+-.++ ++.+.   -.+++...++..........+ ...+.+.  .+    ...+      .++|++|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~--~~----~~~~------~~~DivF   70 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA--FD----LEAL------KALDIIV   70 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET--TC----HHHH------HTCSEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc--cc----hhhh------hcCcEEE
Confidence            68999999999999997 45543   236666665532111111111 1111111  11    1111      3699999


Q ss_pred             eCCChhhHHHHHhcccCCC---EEEEEe
Q 019196          224 DPVGGKLTKESLKLLNWGA---QILVIG  248 (344)
Q Consensus       224 d~~g~~~~~~~~~~l~~~G---~~v~~g  248 (344)
                      -|++.+........+...|   .+++.+
T Consensus        71 ~a~~~~~s~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          71 TCQGGDYTNEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             EecCchHHHHhhHHHHhcCCCeecccCC
Confidence            9999877666555554444   355543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.32  E-value=0.084  Score=42.69  Aligned_cols=35  Identities=20%  Similarity=0.330  Sum_probs=31.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++|||+||+|-+|..++..+...|.+|++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            35799999999999999999988899999999864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.11  E-value=0.12  Score=42.53  Aligned_cols=37  Identities=19%  Similarity=0.328  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ....++|+|+|+ |..|+.++..+...|.+|++++.++
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            445679999999 9999999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.07  E-value=0.15  Score=35.41  Aligned_cols=35  Identities=20%  Similarity=0.332  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ..++++|.|+ |.+|+-+++.++..|.+|+++.+++
T Consensus        31 ~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            4578999999 9999999999999999999998764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.90  E-value=0.54  Score=35.59  Aligned_cols=91  Identities=13%  Similarity=0.042  Sum_probs=49.5

Q ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCC-cEEE
Q 019196          119 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGV-DHVV  196 (344)
Q Consensus       119 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~-~~v~  196 (344)
                      +.++|..|-+.-...-+..+.....+ .|++||=.|+  |.|.+++.+++ .|+ +|++++.+++..+.+++.-. ..++
T Consensus        22 ~~leQy~T~~~~a~~~~~~~~~~~dl-~Gk~VLDlGc--GtG~l~i~a~~-~ga~~V~~vDid~~a~~~ar~N~~~~~~~   97 (197)
T d1ne2a_          22 NYLEQYPTDASTAAYFLIEIYNDGNI-GGRSVIDAGT--GNGILACGSYL-LGAESVTAFDIDPDAIETAKRNCGGVNFM   97 (197)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHTSS-BTSEEEEETC--TTCHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCTTSEEE
T ss_pred             cccccCCCCHHHHHHHHHHHHHcCCC-CCCEEEEeCC--CCcHHHHHHHH-cCCCcccccccCHHHHHHHHHccccccEE
Confidence            44666664322221222234445555 5889998887  34655554444 565 79999999988888876432 2333


Q ss_pred             eCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          197 DLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      ..+-..            -.+.||+||-.
T Consensus        98 ~~D~~~------------l~~~fD~Vi~N  114 (197)
T d1ne2a_          98 VADVSE------------ISGKYDTWIMN  114 (197)
T ss_dssp             ECCGGG------------CCCCEEEEEEC
T ss_pred             EEehhh------------cCCcceEEEeC
Confidence            322111            13579999854

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=90.83  E-value=0.38  Score=38.07  Aligned_cols=102  Identities=15%  Similarity=-0.044  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc-CCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      ......++.+||=+|+  |.|..+..++.....+|++++.+++-.+.+++. .....+++...+..    ++  ......
T Consensus        87 ~~l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~----~~--~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASME----TA--TLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG----GC--CCCSSC
T ss_pred             hhCCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEcccc----cc--ccCCCc
Confidence            3444567778988886  678888888877667999999999888888653 22112221111110    00  012356


Q ss_pred             ccEEEeCCCh---------hhHHHHHhcccCCCEEEEEec
Q 019196          219 VDVLYDPVGG---------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       219 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ||+|+-.-.-         ..+..+.+.|+++|.++....
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~  198 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN  198 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence            9999764321         135678899999999987643

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.70  E-value=0.1  Score=42.31  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=30.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .|+|+|| |..|++++..++..|.+|++++++++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4999999 99999999999999999999998753

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.67  E-value=0.31  Score=37.74  Aligned_cols=91  Identities=21%  Similarity=0.261  Sum_probs=54.3

Q ss_pred             EEEEecCCChHHH-HHHHHHHHc-CCeEEE-EecCHHHHHHH-HhcCCc--EEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          149 VLLVLGAAGGVGV-AAVQIGKVC-GATIIA-VARGAEKIKFL-KSLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       149 ~vlI~g~~g~~G~-~~~~~~~~~-g~~v~~-~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      +|.|+|+ |.+|. ..+...+.. +.++++ .++++++.+.+ +++|..  .+..+++  +    +++   .....+|+|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~----~el---l~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--F----DKI---AKDPKIDAV  104 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--G----GGG---GGCTTCCEE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--h----hhh---cccccceee
Confidence            8899998 98886 344444433 667775 45566665544 566643  2322322  2    122   234579999


Q ss_pred             EeCCChh-hHHHHHhcccCCCEEEEEecc
Q 019196          223 YDPVGGK-LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       223 id~~g~~-~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      +.|+... +.+.+..+++. |+=+++..+
T Consensus       105 ~I~tp~~~H~~~~~~al~~-gk~v~~EKP  132 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA-GKHVMCEKP  132 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT-TCEEEECSS
T ss_pred             eeccchhhhhhHHHHhhhc-chhhhcCCC
Confidence            9999874 45666677765 455556543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.64  E-value=0.12  Score=39.52  Aligned_cols=84  Identities=26%  Similarity=0.350  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      .+++|.|+|. |.+|..++++++..|++|++.++...+..   ....    ..  .+    ++++..     ..|++..+
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~----~~--~~----l~~l~~-----~~D~v~~~  104 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDF----DY--VS----LEDLFK-----QSDVIDLH  104 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTC----EE--CC----HHHHHH-----HCSEEEEC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccchhh---hcch----hH--HH----HHHHHH-----hcccceee
Confidence            3679999999 99999999999999999999997643210   0011    11  11    344443     36888887


Q ss_pred             CCh-h----h-HHHHHhcccCCCEEEEEe
Q 019196          226 VGG-K----L-TKESLKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~-~----~-~~~~~~~l~~~G~~v~~g  248 (344)
                      +.. +    . -...+..|+++..++-++
T Consensus       105 ~plt~~T~~li~~~~l~~mk~~a~lIN~a  133 (199)
T d1dxya1         105 VPGIEQNTHIINEAAFNLMKPGAIVINTA  133 (199)
T ss_dssp             CCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred             ecccccccccccHHHhhccCCceEEEecc
Confidence            763 1    2 266888999998888765

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.40  E-value=0.27  Score=41.17  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=25.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeE-EEEe
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATI-IAVA  178 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v-~~~~  178 (344)
                      +|||+||+|-+|..++..+...|.++ ++++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            69999999999999998888888864 4444

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.33  E-value=0.24  Score=39.87  Aligned_cols=96  Identities=21%  Similarity=0.224  Sum_probs=58.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcC-C------------cEEEeCCCCCchhhHHHHH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG-V------------DHVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g-~------------~~v~~~~~~~~~~~~~~~~  211 (344)
                      ...++|||+|+  |-|..+-.+++....+|++++.+++=.+.++++- .            +.-+.....+    ..+.+
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~D----a~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD----GFEFI  144 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC----HHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEECh----HHHHH
Confidence            44578999997  3455556666654458999999988777776532 1            1001111112    22333


Q ss_pred             HHhcCCCccEEE-eCCCh----------hhHHHHHhcccCCCEEEEEe
Q 019196          212 KARKLKGVDVLY-DPVGG----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       212 ~~~~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                      +.  .++||+|| |+...          +.++.+.+.|+++|.++.-.
T Consensus       145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            32  36799997 44432          24577889999999987643

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=90.23  E-value=0.79  Score=38.59  Aligned_cols=106  Identities=13%  Similarity=0.171  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC---HHHHHHHHhcCCcEEEeCCCCCchh--------------
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---AEKIKFLKSLGVDHVVDLSNESVIP--------------  205 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~~~~g~~~v~~~~~~~~~~--------------  205 (344)
                      +++++.+ +|...+|..|++++..|+.+|.+++++...   ++|.+.++.+|++.+..........              
T Consensus       140 ~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~~~  218 (382)
T d1wkva1         140 RVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGF  218 (382)
T ss_dssp             TSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHHCC
T ss_pred             ccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCcchhhHHHHHHHhhhccccCc
Confidence            4667765 555666999999999999999987766653   4677888999987665432211111              


Q ss_pred             ------------------hHHHHHHHh--cCCCccEEEeCCChh----hHHHHHhcccCCCEEEEEec
Q 019196          206 ------------------SVKEFLKAR--KLKGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       206 ------------------~~~~~~~~~--~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  249 (344)
                                        ...++.++.  .+..+|.++-++|+.    .+...++...|.-+++.+..
T Consensus       219 ~~~~q~~N~~~~~~h~~ttg~EI~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep  286 (382)
T d1wkva1         219 VHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQP  286 (382)
T ss_dssp             EECCTTTCHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             cccccccccceeeehhhcchHHHHHHhhcCCCceeEEEEecccccccccceeehhhhCCccceeEecc
Confidence                              012222222  233578888777652    23445566667777777654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=90.05  E-value=0.82  Score=37.30  Aligned_cols=92  Identities=20%  Similarity=0.248  Sum_probs=59.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCHHHHHHHHhc------CC-----cEEEeCCCCCchhhHHHHHHH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSL------GV-----DHVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~------g~-----~~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ..++|||+|+  |.|..+-++++... .+|++++.+++-.+.++++      +.     -.++.   .+    ..+.++.
T Consensus        77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~---~D----a~~~l~~  147 (312)
T d1uira_          77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DD----ARAYLER  147 (312)
T ss_dssp             CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SC----HHHHHHH
T ss_pred             CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE---ch----HHHHhhh
Confidence            4578999997  45677777777664 5899999998877777653      10     01221   12    3344444


Q ss_pred             hcCCCccEEE-eCC---Ch----------hhHHHHHhcccCCCEEEEE
Q 019196          214 RKLKGVDVLY-DPV---GG----------KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       214 ~~~~~~d~vi-d~~---g~----------~~~~~~~~~l~~~G~~v~~  247 (344)
                      + ...||+|| |..   +.          +.++.+.+.|+++|.++.-
T Consensus       148 ~-~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         148 T-EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             C-CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             c-CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            4 45799997 432   21          2357788999999988763

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.01  E-value=0.18  Score=37.26  Aligned_cols=96  Identities=18%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH--HHHHHHHhc----C-CcEEEe---------------CCCCCchhh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFLKSL----G-VDHVVD---------------LSNESVIPS  206 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~~----g-~~~v~~---------------~~~~~~~~~  206 (344)
                      +|.|.|- |.+|.++.+.+...+.+++++-...  +....+-++    | ....+.               +...+.   
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p---   77 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP---   77 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG---
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh---
Confidence            5889998 9999999998887788887766442  233333221    2 010000               111111   


Q ss_pred             HHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          207 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                       +++-+  ...++|+|+||+|. ...+.+...++.+-+=|.+..+.
T Consensus        78 -~~i~W--~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          78 -KEIPW--AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             -GGCCT--GGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             -HHCcc--cccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence             11111  12479999999997 34455666777666555555443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=89.81  E-value=2.1  Score=30.17  Aligned_cols=32  Identities=31%  Similarity=0.269  Sum_probs=26.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEec
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVAR  179 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~  179 (344)
                      .+|.|.|++|.+|..++..+...+.  ++...+.
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di   34 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI   34 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEec
Confidence            3689999779999999988887765  6777774

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.72  E-value=0.21  Score=36.84  Aligned_cols=35  Identities=20%  Similarity=0.401  Sum_probs=29.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~  181 (344)
                      .|++|+|+|+ |..|+.+++.++..+.  +|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3789999999 9999999999988774  788887654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.66  E-value=1.8  Score=33.70  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=28.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG  180 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~  180 (344)
                      +.+|+|.|+ |++|..++..+...|. ++++++.+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            468999999 9999999999999999 77777644

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.65  E-value=0.76  Score=37.76  Aligned_cols=92  Identities=22%  Similarity=0.284  Sum_probs=53.2

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH----HhcCCc---EEEeCCCCCchhhHHHHHH
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL----KSLGVD---HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~~  212 (344)
                      .....++++||-+|+  |.|+++..+++ .|+ +|++++.++. ...+    ++.+..   .++..+..+.         
T Consensus        33 ~~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l---------   99 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDV---------   99 (328)
T ss_dssp             HHHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTS---------
T ss_pred             ccccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhc---------
Confidence            344568899999987  45777665555 576 8999998752 3333    334422   2333322222         


Q ss_pred             HhcCCCccEEEeCC-Ch-----h----hHHHHHhcccCCCEEE
Q 019196          213 ARKLKGVDVLYDPV-GG-----K----LTKESLKLLNWGAQIL  245 (344)
Q Consensus       213 ~~~~~~~d~vid~~-g~-----~----~~~~~~~~l~~~G~~v  245 (344)
                      ......+|+|+... +.     .    .+...-++|+|+|+++
T Consensus       100 ~~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         100 HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cCcccceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            01235799987532 21     1    2233447899999874

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.62  E-value=0.78  Score=36.06  Aligned_cols=96  Identities=16%  Similarity=0.147  Sum_probs=60.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHH----HhcCCc---EEEeCCCCCchhhHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVD---HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~  211 (344)
                      ....+.+.++||=+|+  |.|..+..+++.. +.++++++.+ +..+.+    .+.|..   .....+-.+.        
T Consensus        74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D~~~~--------  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGDFFEP--------  142 (253)
T ss_dssp             HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECCTTSC--------
T ss_pred             hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccccchhh--------
Confidence            4455677789998885  6788899999877 5688888864 333333    233321   1221111111        


Q ss_pred             HHhcCCCccEEEeCCC-----h----hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                         ...++|+|+-..-     .    ..+..+.+.|+|+|+++....
T Consensus       143 ---~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 ---LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             ---CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             ---cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence               1246999974322     2    235778899999999998754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.58  E-value=0.17  Score=40.30  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=28.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~  181 (344)
                      .|+|+|| |..|++++..++..|. +|+++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            6999999 9999999999999996 888877764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.57  E-value=0.19  Score=41.33  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=30.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .++|+|+|| |..|+.++..+...|.+|++++.++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            578999999 9999999999998899999999874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=89.49  E-value=0.13  Score=41.40  Aligned_cols=62  Identities=24%  Similarity=0.324  Sum_probs=37.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|||+||+|-+|..++..+...| +++++......      +-    .|..+.   +.++++.+   ..++|+||+|++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~------~~----~Dl~~~---~~~~~~i~---~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE------FC----GDFSNP---KGVAETVR---KLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS------SC----CCTTCH---HHHHHHHH---HHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc------cc----CcCCCH---HHHHHHHH---HcCCCEEEEecc
Confidence            59999999999999888777666 45555543221      10    122221   11333332   236899999986

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.44  E-value=2.1  Score=34.20  Aligned_cols=100  Identities=18%  Similarity=0.164  Sum_probs=59.6

Q ss_pred             hcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHH----HhcCCcEEE-eCCCCCchhhHHHHHHHh
Q 019196          141 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVV-DLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       141 ~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~~~~~~~  214 (344)
                      ....+++++||=..+ ++=|. +.+++..+ +.+|++.+.+..|...+    +.+|...+. ...+...   .    ...
T Consensus        97 ~L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~---~----~~~  167 (284)
T d1sqga2          97 WLAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYP---S----QWC  167 (284)
T ss_dssp             HHCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCT---H----HHH
T ss_pred             ccCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccccc---c----hhc
Confidence            456788999887655 22232 23334333 36899999999987666    457765333 2333222   1    112


Q ss_pred             cCCCccEEE-e--CCChh--------------------------hHHHHHhcccCCCEEEEEec
Q 019196          215 KLKGVDVLY-D--PVGGK--------------------------LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       215 ~~~~~d~vi-d--~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ....||.|+ |  |+|..                          .+..++..++++|++|....
T Consensus       168 ~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTC  231 (284)
T d1sqga2         168 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  231 (284)
T ss_dssp             TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             ccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeee
Confidence            345799886 4  77642                          13556677888888876543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.35  E-value=0.63  Score=38.09  Aligned_cols=91  Identities=22%  Similarity=0.325  Sum_probs=53.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHH----HhcCCc---EEEeCCCCCchhhHHHHHHH
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL----KSLGVD---HVVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~~~  213 (344)
                      ..+.++++||-+|+  |.|+++..+++ .|+ +|++++.++. ...+    +..+..   .++..+..+..         
T Consensus        29 ~~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~---------   95 (316)
T d1oria_          29 RHLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE---------   95 (316)
T ss_dssp             HHHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC---------
T ss_pred             cccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc---------
Confidence            34568899999987  35777776666 576 7999998754 2222    233321   23333322220         


Q ss_pred             hcCCCccEEEeC-CCh-----hh----HHHHHhcccCCCEEE
Q 019196          214 RKLKGVDVLYDP-VGG-----KL----TKESLKLLNWGAQIL  245 (344)
Q Consensus       214 ~~~~~~d~vid~-~g~-----~~----~~~~~~~l~~~G~~v  245 (344)
                      .....+|+|+.. .+.     ..    +...-++|+|+|+++
T Consensus        96 ~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          96 LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            123579999753 322     12    234557999999885

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=89.34  E-value=3.1  Score=30.73  Aligned_cols=40  Identities=23%  Similarity=0.144  Sum_probs=34.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL  187 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~  187 (344)
                      =++|.|+|+ |.+|...+.++...|++|++.+.+++..+.+
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            357999999 9999999988888999999999998866554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.30  E-value=0.22  Score=41.28  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      ..+++||+||+|-+|..++..+...|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            3468999999999999999999999999999875

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.30  E-value=2.2  Score=30.25  Aligned_cols=70  Identities=23%  Similarity=0.277  Sum_probs=41.0

Q ss_pred             EEEEecCCChHHHHHHHHHH-Hc--CCeEEEEecCHHHHHHHHhc---C-CcEEEe-CCCCCchhhHHHHHHHhcCCCcc
Q 019196          149 VLLVLGAAGGVGVAAVQIGK-VC--GATIIAVARGAEKIKFLKSL---G-VDHVVD-LSNESVIPSVKEFLKARKLKGVD  220 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~-~~--g~~v~~~~~~~~~~~~~~~~---g-~~~v~~-~~~~~~~~~~~~~~~~~~~~~~d  220 (344)
                      +|.|+|++|.+|..++.++. ..  ..++...+..+.....+..+   . ....-. ....++    +++      .+.|
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~----~~~------~~aD   71 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT----PAL------EGAD   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH----HHH------TTCS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc----ccc------CCCC
Confidence            58899977999988887654 33  34788888754333333332   1 111111 122222    222      4789


Q ss_pred             EEEeCCCh
Q 019196          221 VLYDPVGG  228 (344)
Q Consensus       221 ~vid~~g~  228 (344)
                      +|+-|.|.
T Consensus        72 vvvitaG~   79 (145)
T d2cmda1          72 VVLISAGV   79 (145)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99999984

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.28  E-value=0.42  Score=34.48  Aligned_cols=47  Identities=11%  Similarity=0.065  Sum_probs=38.5

Q ss_pred             HHHHHHHHHhcCCCCCCEEEEe--cCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          132 GTSHVALVHRAQLSSGQVLLVL--GAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       132 ~ta~~~l~~~~~~~~~~~vlI~--g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .|....+  ..+..+++.++|+  |+ |-+|+-+++.+...|++|+++.+.+
T Consensus        26 ~t~~d~l--~~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM--DGKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH--HTCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHh--cCccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC
Confidence            3556555  4567788888887  66 9999999999999999999999864

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=89.24  E-value=0.41  Score=36.33  Aligned_cols=89  Identities=21%  Similarity=0.185  Sum_probs=59.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          144 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       144 ~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +.++.+||=+|+  |.|..+..+     .++++++.+++-.+.+++.+.. ++..+..+..         .....||+|+
T Consensus        34 ~~~~~~vLDiGc--G~G~~~~~~-----~~~~giD~s~~~~~~a~~~~~~-~~~~d~~~l~---------~~~~~fD~I~   96 (208)
T d1vlma_          34 LLPEGRGVEIGV--GTGRFAVPL-----KIKIGVEPSERMAEIARKRGVF-VLKGTAENLP---------LKDESFDFAL   96 (208)
T ss_dssp             HCCSSCEEEETC--TTSTTHHHH-----TCCEEEESCHHHHHHHHHTTCE-EEECBTTBCC---------SCTTCEEEEE
T ss_pred             hCCCCeEEEECC--CCccccccc-----ceEEEEeCChhhcccccccccc-cccccccccc---------cccccccccc
Confidence            456778999987  345554444     3578999999988888876643 3333322220         1235699998


Q ss_pred             eCCCh-------hhHHHHHhcccCCCEEEEEec
Q 019196          224 DPVGG-------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       224 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      ..-.-       ..+..+.+.|+|+|.++....
T Consensus        97 ~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          97 MVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhcCCCCceEEEEec
Confidence            65432       246788899999999988654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.14  E-value=0.21  Score=36.83  Aligned_cols=97  Identities=16%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC---HHHHHHHHh----cC---CcEEE-------e------CCCCCchh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---AEKIKFLKS----LG---VDHVV-------D------LSNESVIP  205 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~~~----~g---~~~v~-------~------~~~~~~~~  205 (344)
                      +|.|.|- |.+|.++...+-..+.+++++-..   .+....+-+    .|   .+...       +      ++..+.  
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p--   78 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP--   78 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG--
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh--
Confidence            5889998 999999998887778887776542   344444433    22   11100       0      011111  


Q ss_pred             hHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                        .++-+  ...++|+|+||+|. ...+.+...+..+-+-|.+..+..
T Consensus        79 --~~i~W--~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          79 --ENIPW--SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             --GGCCH--HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             --HHCCc--cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence              11111  11379999999997 455667788888877777765543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=89.14  E-value=1.5  Score=31.19  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=30.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCHHHH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKI  184 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~  184 (344)
                      ..+|.|.|+ |.+|..++..+...|  .+++.++.++++.
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            458999998 999999988887766  3899999887643

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.06  E-value=0.23  Score=40.83  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=31.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      ++..+|+|+|+ |-.|+.++..+...|.+|++...++
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            45567999999 9999999999999999999988753

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.77  E-value=1.1  Score=36.68  Aligned_cols=97  Identities=16%  Similarity=0.171  Sum_probs=64.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCC-eEEEEecCHHHHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKG  218 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~~~-~g~-~v~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~  218 (344)
                      +..+++.|+|+ |..+...++.+.. ... +|.+..++.++.+.+    +..+.....+     .   .+.+      .+
T Consensus       123 ~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~-----~---~~a~------~~  187 (320)
T d1omoa_         123 KNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ-----P---AEEA------SR  187 (320)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC-----C---HHHH------TS
T ss_pred             CCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc-----h---hhhh------cc
Confidence            34468899998 9998887776654 455 899999998876544    3344443321     1   1121      46


Q ss_pred             ccEEEeCCCh--hhHHHHHhcccCCCEEEEEeccCCCCCCcc
Q 019196          219 VDVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPVIP  258 (344)
Q Consensus       219 ~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~  258 (344)
                      .|+|+-|+++  +.+.  .++++++-.+..+|........++
T Consensus       188 aDiV~taT~s~~P~~~--~~~l~~G~hv~~iGs~~p~~~Eld  227 (320)
T d1omoa_         188 CDVLVTTTPSRKPVVK--AEWVEEGTHINAIGADGPGKQELD  227 (320)
T ss_dssp             SSEEEECCCCSSCCBC--GGGCCTTCEEEECSCCSTTCCCBC
T ss_pred             ccEEEEeccCcccccc--hhhcCCCCeEeecCCccccccccC
Confidence            8999999876  3443  257899999999997764433333

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.52  E-value=0.057  Score=39.05  Aligned_cols=88  Identities=13%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP  225 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~---g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (344)
                      +|.|+|++|-+|+-.++++..+   ..++..+.++...-+... .... -+.....+.          ....+.|++|-|
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~-~~~~~~~~~----------~~~~~~d~vf~a   71 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAES-SLRVGDVDS----------FDFSSVGLAFFA   71 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTE-EEECEEGGG----------CCGGGCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccc-cchhccchh----------hhhccceEEEec
Confidence            6899999999999999999643   346666554432111110 0111 011100000          112468999999


Q ss_pred             CChhhHHHH-HhcccCCCEEEEEe
Q 019196          226 VGGKLTKES-LKLLNWGAQILVIG  248 (344)
Q Consensus       226 ~g~~~~~~~-~~~l~~~G~~v~~g  248 (344)
                      .+....... -.....+.++++.+
T Consensus        72 ~p~~~s~~~~~~~~~~g~~VID~S   95 (144)
T d2hjsa1          72 AAAEVSRAHAERARAAGCSVIDLS   95 (144)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             CCcchhhhhccccccCCceEEeec
Confidence            998655544 45555666666644

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.50  E-value=0.19  Score=37.33  Aligned_cols=34  Identities=18%  Similarity=0.159  Sum_probs=28.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .+++|+|.|+ |.+|+-++..++.+|.++.++...
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence            5789999999 999999999999999876555443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=88.44  E-value=1.9  Score=31.49  Aligned_cols=97  Identities=21%  Similarity=0.208  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          143 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       143 ~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      .+..+.+||=.++  |.|...+..++ .|++++.++.+++..+.++    .++.. .+...+...+    . ......+.
T Consensus        38 ~~~~g~~vLDl~~--G~G~~~i~a~~-~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~----~-~~~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFA--GSGAVGLEAAS-EGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVF----L-PEAKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETC--SSCHHHHHHHH-TTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHH----H-HHHHHTTC
T ss_pred             cccCCCeEEEecc--ccchhhhhhhh-ccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcc----c-ccccccCC
Confidence            4667788876554  34444445444 5899999999988777664    34543 3332221111    1 11123446


Q ss_pred             CccEEEeC----CCh-hhHHHHH--hcccCCCEEEEE
Q 019196          218 GVDVLYDP----VGG-KLTKESL--KLLNWGAQILVI  247 (344)
Q Consensus       218 ~~d~vid~----~g~-~~~~~~~--~~l~~~G~~v~~  247 (344)
                      .||+||-.    .+. +.+...+  .+++++|.++.-
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            79999842    121 2333332  578999987753

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.42  E-value=0.86  Score=33.49  Aligned_cols=100  Identities=21%  Similarity=0.143  Sum_probs=61.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHH-HHHH--hcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEE
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLK--SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL  222 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~-~~~~--~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (344)
                      .|++|+|.|-+.-+|.=++.++...|+.|+....+.... ..-.  ..-...+-+..... .+.+++..     ...|++
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lk~~~-----~~aDIv  101 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYS-EDLLKKCS-----LDSDVV  101 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECC-HHHHHHHH-----HHCSEE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccc-hhHHhhcc-----ccCCEE
Confidence            578999999989999999999988999988666442110 0000  00011111111100 01122221     248999


Q ss_pred             EeCCChhhHHHHHhcccCCCEEEEEeccC
Q 019196          223 YDPVGGKLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       223 id~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +.++|.+.+.---++++++..++++|...
T Consensus       102 IsavG~p~~~i~~d~ik~GavvIDvGi~~  130 (171)
T d1edza1         102 ITGVPSENYKFPTEYIKEGAVCINFACTK  130 (171)
T ss_dssp             EECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             EEccCCCccccChhhcccCceEeeccccc
Confidence            99999876544457889999999988653

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.36  E-value=0.31  Score=39.58  Aligned_cols=93  Identities=15%  Similarity=0.143  Sum_probs=59.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCC-------c---EEEeCCCCCchhhHHHHHHHh
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGV-------D---HVVDLSNESVIPSVKEFLKAR  214 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~-------~---~v~~~~~~~~~~~~~~~~~~~  214 (344)
                      ..++|||+|+  |-|..+-.+++..+. +|++++.+++-.+.++++-.       +   .++.   .+    ..+.++.+
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~---~D----a~~~l~~~  159 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---AN----GAEYVRKF  159 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SC----HHHHGGGC
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh---hh----HHHHHhcC
Confidence            3478999997  445667777777654 89999999887777765320       0   1221   11    23334333


Q ss_pred             cCCCccEEE-eCCCh-----------hhHHHHHhcccCCCEEEEEe
Q 019196          215 KLKGVDVLY-DPVGG-----------KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       215 ~~~~~d~vi-d~~g~-----------~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ...||+|| |+...           +.++.+.+.|+++|.++.-.
T Consensus       160 -~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         160 -KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             -SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             -CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence             45799997 43221           24577889999999988743

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=87.97  E-value=0.25  Score=36.71  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=28.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .|+|+|+ |+.|+.++..+...|.+|.++.+.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            4899999 999999999999999999999853

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.68  E-value=0.21  Score=39.35  Aligned_cols=32  Identities=22%  Similarity=0.376  Sum_probs=28.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~  181 (344)
                      +|+|+|| |..|+.++..++..|. +|++++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            4899999 9999999999999997 699988763

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.66  E-value=3  Score=31.05  Aligned_cols=104  Identities=22%  Similarity=0.304  Sum_probs=63.4

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcE-EEeCCCCCchhhHHHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDH-VVDLSNESVIPSVKEFLKA  213 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~~~~~  213 (344)
                      .....+++..+ |-++ .|.|-.+-.+++.. +++|++++.+++..+.+++    ++... .+..+   +. .+..+...
T Consensus        17 ~~l~~~~~~~~-lD~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~---f~-~~~~~~~~   90 (192)
T d1m6ya2          17 EFLKPEDEKII-LDCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS---YR-EADFLLKT   90 (192)
T ss_dssp             HHHCCCTTCEE-EETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECC---GG-GHHHHHHH
T ss_pred             HhhCCCCCCEE-EEec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHH---Hh-hHHHHHHH
Confidence            45567788753 4443 56666666676654 6799999999998888864    23222 22221   21 14445555


Q ss_pred             hcCCCccEEEeCCCh----------------hhHHHHHhcccCCCEEEEEec
Q 019196          214 RKLKGVDVLYDPVGG----------------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       214 ~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                      .....+|.|+--.|-                ..+..+.+.++++|+++.+..
T Consensus        91 ~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f  142 (192)
T d1m6ya2          91 LGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISF  142 (192)
T ss_dssp             TTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred             cCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecc
Confidence            555689887532321                134566788888888877653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.58  E-value=2.5  Score=30.41  Aligned_cols=86  Identities=14%  Similarity=0.104  Sum_probs=52.1

Q ss_pred             EEEEecCCChHHHH-HHHHHHHc-CCeEEEEe-cCHHHHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          149 VLLVLGAAGGVGVA-AVQIGKVC-GATIIAVA-RGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       149 ~vlI~g~~g~~G~~-~~~~~~~~-g~~v~~~~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +|.|.|. |.+|.- ....++.. +.++++++ ++.++.. .+++++...   ++   .   .+++.     ..+|+|+.
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~---~---~~~l~-----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD---S---LSSLA-----ASCDAVFV   67 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS---S---HHHHH-----TTCSEEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc---c---chhhh-----hhcccccc
Confidence            5889998 998864 45555544 66776554 5455544 345666531   11   1   33332     35899999


Q ss_pred             CCChh-hHHHHHhcccCCCEEEEEecc
Q 019196          225 PVGGK-LTKESLKLLNWGAQILVIGFA  250 (344)
Q Consensus       225 ~~g~~-~~~~~~~~l~~~G~~v~~g~~  250 (344)
                      |+... ..+.+..+++.+ +=+++..+
T Consensus        68 ~tp~~~h~~~~~~al~~g-k~V~~EKP   93 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG-VHVCVDKP   93 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT-CEEEEESS
T ss_pred             cccchhcccccccccccc-ceeecccc
Confidence            99864 456666666665 55666543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.54  E-value=0.55  Score=35.63  Aligned_cols=41  Identities=22%  Similarity=0.319  Sum_probs=36.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHhc
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL  190 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~  190 (344)
                      +|.|.|. |-+|+..+..+...|.+|++.+.++++.+.+.+-
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc
Confidence            4789999 9999999999988999999999999888877653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.54  E-value=0.84  Score=35.73  Aligned_cols=34  Identities=29%  Similarity=0.368  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .+.+|+|.|. |.+|..+++++...|++|++++.+
T Consensus        30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            6789999998 999999999999999999877643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.50  E-value=0.24  Score=38.87  Aligned_cols=32  Identities=25%  Similarity=0.488  Sum_probs=28.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      |+|+|+ |..|+.++..+...|.+|+++++++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            899999 99999999999889999999997653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=87.48  E-value=0.24  Score=39.14  Aligned_cols=33  Identities=18%  Similarity=0.349  Sum_probs=29.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .|+|+|+ |+.|++++..|...|.+|++++++++
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            3899999 99999999999999999999998764

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.46  E-value=0.89  Score=33.32  Aligned_cols=97  Identities=14%  Similarity=0.159  Sum_probs=56.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEec---CHHHHHHHHh----cC---CcEEEe-------------CCCCCch
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVAR---GAEKIKFLKS----LG---VDHVVD-------------LSNESVI  204 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~---~~~~~~~~~~----~g---~~~v~~-------------~~~~~~~  204 (344)
                      +|.|.|- |.+|.++...+-.. ..+++++-.   +.+....+-+    .|   ....++             ++..+. 
T Consensus         3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p-   80 (169)
T d1u8fo1           3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP-   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh-
Confidence            6899998 99999999766544 567777643   2344544433    22   111010             011111 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccCC
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG  252 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  252 (344)
                         .++-+  ...++|+|+||+|. ...+.+...+..+-+-|.+..+..
T Consensus        81 ---~~i~W--~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          81 ---SKIKW--GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             ---GGCCT--TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             ---hhCCc--cccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence               11100  23479999999997 445566677887776677665543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=87.33  E-value=3.6  Score=32.07  Aligned_cols=96  Identities=18%  Similarity=0.124  Sum_probs=60.5

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHH----HhcCC-c--EEEeCCCCCchhhHHHHH
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGV-D--HVVDLSNESVIPSVKEFL  211 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~----~~~g~-~--~v~~~~~~~~~~~~~~~~  211 (344)
                      ....+.+..+||=+|+  +.|..+..+++.. +.++++++. ++-.+.+    ++.|. +  .....+..+.        
T Consensus        75 ~~~d~~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~~--------  143 (256)
T d1qzza2          75 DAYDWSAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP--------  143 (256)
T ss_dssp             HTSCCTTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC--------
T ss_pred             hcCCCccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeecccc--------
Confidence            3445667788888885  7789999999877 679999986 4434333    33342 2  1222221111        


Q ss_pred             HHhcCCCccEEEeCC-----Ch----hhHHHHHhcccCCCEEEEEec
Q 019196          212 KARKLKGVDVLYDPV-----GG----KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       212 ~~~~~~~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~  249 (344)
                         ...++|+++-.-     +.    ..+..+.+.|+|+|+++.+..
T Consensus       144 ---~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         144 ---LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             ---CSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ---ccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence               124689887432     22    235678899999999998764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.32  E-value=0.13  Score=38.68  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      ++..|+|+|+ |+.|+.++..+.+.|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            3467999999 999999999999999999999754

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.08  E-value=3.6  Score=28.80  Aligned_cols=35  Identities=14%  Similarity=0.235  Sum_probs=27.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKI  184 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~  184 (344)
                      +|.|.|+ |.+|..++..+...+.  ++...+.++++.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            5788898 9999998877766654  899999877643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.82  E-value=0.58  Score=40.09  Aligned_cols=32  Identities=28%  Similarity=0.442  Sum_probs=27.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG  180 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~  180 (344)
                      .+|||.|+ |++|..++..+-..|. ++++++.+
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            46999999 9999999998888898 78887765

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=86.82  E-value=0.23  Score=36.49  Aligned_cols=96  Identities=18%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHH--HHHHHHh----cC---CcE-------EEe------CCCCCchh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAE--KIKFLKS----LG---VDH-------VVD------LSNESVIP  205 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~--~~~~~~~----~g---~~~-------v~~------~~~~~~~~  205 (344)
                      +|.|.|- |.+|.++.+.+... ..+++++-...+  ....+-+    .|   ...       +++      +...+.  
T Consensus         3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p--   79 (166)
T d1gado1           3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP--   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG--
T ss_pred             EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh--
Confidence            5889998 99999999887765 347776664433  2333322    12   111       110      111111  


Q ss_pred             hHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          206 SVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                        .++-+  ...++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus        80 --~~i~W--~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          80 --ANLKW--DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             --GGGCH--HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             --HHCCc--cccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence              11111  11379999999997 44556667777776666666544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=86.68  E-value=2.7  Score=29.59  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=29.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKI  184 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~  184 (344)
                      .+|.|.|+ |.+|..++..+...+.  +++.++.++++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            46889998 9999999888877765  799999887643

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.62  E-value=0.97  Score=37.89  Aligned_cols=92  Identities=12%  Similarity=0.222  Sum_probs=61.3

Q ss_pred             EecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh----cCCcE--------EE------eCCCCCchhhHHHHHH
Q 019196          152 VLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDH--------VV------DLSNESVIPSVKEFLK  212 (344)
Q Consensus       152 I~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~~~--------v~------~~~~~~~~~~~~~~~~  212 (344)
                      |+.+-++.|.-.+..++..|+ +|++.+.+++-.+.+++    .+...        ..      .....+    ....+.
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D----a~~~~~  124 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD----ANRLMA  124 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC----HHHHHH
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh----hhhhhH
Confidence            444457889999999998887 89999999998887753    12111        00      011111    222332


Q ss_pred             HhcCCCccEE-EeCCCh--hhHHHHHhcccCCCEEEEEe
Q 019196          213 ARKLKGVDVL-YDPVGG--KLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       213 ~~~~~~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g  248 (344)
                       ..+..||+| +|.-|+  +.++.++++++.+|.+....
T Consensus       125 -~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         125 -ERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             -HSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -hhcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence             235679977 688776  67799999999998877654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.57  E-value=0.3  Score=37.32  Aligned_cols=33  Identities=27%  Similarity=0.233  Sum_probs=27.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARG  180 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~  180 (344)
                      ++|||+||+|-+|..++..+...|.  +|++..++
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~   37 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   37 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            6899999999999999988877776  66666654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=86.38  E-value=0.24  Score=39.80  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=29.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      +|+|+|+ |..|+.++..+...|.+|++++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4899999 9999999999999999999998753

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.17  E-value=2.7  Score=31.85  Aligned_cols=94  Identities=26%  Similarity=0.307  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCC---hHHHHHHHHHHHcCCeEEEEecCHHH-------HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019196          146 SGQVLLVLGAAG---GVGVAAVQIGKVCGATIIAVARGAEK-------IKFLKSLGVDHVVDLSNESVIPSVKEFLKARK  215 (344)
Q Consensus       146 ~~~~vlI~g~~g---~~G~~~~~~~~~~g~~v~~~~~~~~~-------~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~  215 (344)
                      ...+|+|+.|.|   +=|++++..++..|++|.+....+.+       .+..++++...+ +.....            .
T Consensus        39 ~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~  105 (211)
T d2ax3a2          39 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFEPS------------I  105 (211)
T ss_dssp             TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCCGG------------G
T ss_pred             cCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccc-cccccc------------c
Confidence            356788886655   55577888888889988776543221       222244554332 211111            1


Q ss_pred             CCCccEEEeCC-Ch-------hhHHHHHhcccCCC-EEEEEeccCC
Q 019196          216 LKGVDVLYDPV-GG-------KLTKESLKLLNWGA-QILVIGFASG  252 (344)
Q Consensus       216 ~~~~d~vid~~-g~-------~~~~~~~~~l~~~G-~~v~~g~~~~  252 (344)
                      ...+|+++|+. |.       ..+...++++...+ .++.+..+++
T Consensus       106 ~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         106 LNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             GGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             ccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence            13689999986 42       23455666555554 5777776654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=86.12  E-value=2.4  Score=35.16  Aligned_cols=31  Identities=26%  Similarity=0.373  Sum_probs=25.9

Q ss_pred             CEEEEecCCChHHHHHHH-HHHHcCCeEEEEe
Q 019196          148 QVLLVLGAAGGVGVAAVQ-IGKVCGATIIAVA  178 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~-~~~~~g~~v~~~~  178 (344)
                      -+|||+||+|-+|..++. +++..|.+|++++
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            369999999999977665 5677899999986

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.97  E-value=0.35  Score=37.47  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      |+|+|+ |..|+.++..+...|.+|+++++++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799999 9999999999999999999999864

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.66  E-value=0.35  Score=36.98  Aligned_cols=31  Identities=16%  Similarity=0.272  Sum_probs=28.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      -|+|+|+ |+.|+.++..+...|.+|++++..
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            3899999 999999999999999999999864

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.66  E-value=0.73  Score=36.87  Aligned_cols=73  Identities=19%  Similarity=0.315  Sum_probs=42.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEe--cCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGA-TIIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV  226 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (344)
                      |||+||+|-+|..++..+...|. +|++++  .+..+.....+.......+..     +..............+.++-++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKE-----DFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHH-----HHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccch-----HHHHHHhhhhcccchhhhhhhc
Confidence            89999999999999988888897 688775  222233333444333332211     1122222223344677887765


Q ss_pred             C
Q 019196          227 G  227 (344)
Q Consensus       227 g  227 (344)
                      +
T Consensus        77 a   77 (307)
T d1eq2a_          77 A   77 (307)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=85.42  E-value=2.8  Score=34.07  Aligned_cols=100  Identities=17%  Similarity=0.117  Sum_probs=58.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHh----cCC--c--EEEeCCCCCchhhHHHHHH
Q 019196          142 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGV--D--HVVDLSNESVIPSVKEFLK  212 (344)
Q Consensus       142 ~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~----~g~--~--~v~~~~~~~~~~~~~~~~~  212 (344)
                      ..+.++++||=..+  +.|-.++.+++ .|+ +|+.++.++...+.+++    .|.  +  ..+..   +..+.++... 
T Consensus       140 ~~~~~g~~VLdlf~--~~G~~sl~aa~-~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~---d~~~~l~~~~-  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFS--YTAAFSVAAAM-GGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM---DVFDYFKYAR-  212 (317)
T ss_dssp             HTTTBTCEEEEETC--TTTHHHHHHHH-TTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES---CHHHHHHHHH-
T ss_pred             HHhhCCCceeecCC--CCcHHHHHHHh-CCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc---cHHHHHHHHH-
Confidence            45678899886654  33333344443 466 79999999887777753    232  1  12222   2211122221 


Q ss_pred             HhcCCCccEEEeCCC---h-------------hhHHHHHhcccCCCEEEEEec
Q 019196          213 ARKLKGVDVLYDPVG---G-------------KLTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       213 ~~~~~~~d~vid~~g---~-------------~~~~~~~~~l~~~G~~v~~g~  249 (344)
                       ..+..||+||---+   .             ..+..++++|+|+|.++.+..
T Consensus       213 -~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         213 -RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             -HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             -hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             23567999984211   0             245668899999999988654

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=85.25  E-value=0.41  Score=35.41  Aligned_cols=96  Identities=18%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc----CCeEEEEec--CHHHHHHHHhc----C---CcE-------EEe------CCCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC----GATIIAVAR--GAEKIKFLKSL----G---VDH-------VVD------LSNES  202 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~----g~~v~~~~~--~~~~~~~~~~~----g---~~~-------v~~------~~~~~  202 (344)
                      +|.|.|- |.+|.++...+-..    ..+|+++-.  +.+....+-++    |   ...       .++      +...+
T Consensus         3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            5889998 99999998776432    235666553  23334444221    1   110       010      11111


Q ss_pred             chhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          203 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                      +    .++-+  ...++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus        82 p----~~i~W--~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          82 P----AQLPW--GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             G----GGSCT--TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             H----HHCcc--cccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            1    11110  23479999999997 44456667777777767766543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.23  E-value=4.2  Score=28.53  Aligned_cols=34  Identities=24%  Similarity=0.168  Sum_probs=27.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEK  183 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~  183 (344)
                      +|.|.|+ |.+|..++..+...+.  ++...+.++++
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   37 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL   37 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch
Confidence            5788898 9999999888776665  78899988765

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.18  E-value=2.9  Score=34.05  Aligned_cols=113  Identities=15%  Similarity=0.157  Sum_probs=66.6

Q ss_pred             HHHHHHHhcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEecC---HHHHHHHHhcCCcEEEeCCCC---------
Q 019196          134 SHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---AEKIKFLKSLGVDHVVDLSNE---------  201 (344)
Q Consensus       134 a~~~l~~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~~~~g~~~v~~~~~~---------  201 (344)
                      |++.+.....-.+..+|+. ..+|..|.+++..++..|.+++++...   .++.+.++.+|++-+....+.         
T Consensus        62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhh
Confidence            3334433332334444444 444999999999999999977766543   456777788887644321100         


Q ss_pred             --------------C--c----hhhHHHHHHHhcCCCccEEEeCCChh----hHHHHHhcccCCCEEEEEec
Q 019196          202 --------------S--V----IPSVKEFLKARKLKGVDVLYDPVGGK----LTKESLKLLNWGAQILVIGF  249 (344)
Q Consensus       202 --------------~--~----~~~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  249 (344)
                                    .  .    .....++.+.  ...+|.+|-++|+.    .+...++.+.+.-+++.+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q--~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ--DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH--CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHh--cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                          0  0    0012222222  23589999988762    33556667778888887753

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=84.97  E-value=2.1  Score=30.17  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=26.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEK  183 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~  183 (344)
                      +|.|.|+ |.+|..++..+...+.  ++...+.++++
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            5888898 9999999988887765  79999977764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=84.87  E-value=3.2  Score=29.34  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=28.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEK  183 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~  183 (344)
                      ++|.|.|+ |.+|..++..+...|.  +++..+.++++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~   38 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAK   38 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccch
Confidence            57889997 9999988887776664  78888888765

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.68  E-value=0.64  Score=37.40  Aligned_cols=33  Identities=27%  Similarity=0.421  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      .+++|+|.|- |.+|..+++.+...|++|++++.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            4789999999 99999999999999999988764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.50  E-value=0.44  Score=38.71  Aligned_cols=33  Identities=24%  Similarity=0.343  Sum_probs=29.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE  182 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~  182 (344)
                      .|+|+|| |..|++++..++..|.++++.+..++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            6899999 99999999999999999999987643

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.05  E-value=2.6  Score=29.82  Aligned_cols=33  Identities=21%  Similarity=0.322  Sum_probs=27.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~  181 (344)
                      +|.|.|++|.+|..++.++...+.  ++..++.++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            588999889999999999988874  788888654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=83.79  E-value=0.38  Score=39.16  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=28.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      ++|||+|++|-+|..++..+...|..++++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            589999999999999999998889988776654

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.73  E-value=1.3  Score=32.39  Aligned_cols=82  Identities=15%  Similarity=0.142  Sum_probs=51.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEeCCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG  227 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (344)
                      +|.|+|. |.+|...+..++.. +++++++.....+.     ........+.+...           -...+|+|+.|++
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~-----~~~~~~~~~~~~~~-----------~~~~~D~Vvi~tp   67 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL-----DTKTPVFDVADVDK-----------HADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC-----SSSSCEEEGGGGGG-----------TTTTCSEEEECSC
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc-----ccccccccchhhhh-----------hccccceEEEeCC
Confidence            6899998 99998888777765 56777655443211     11111222221111           1136899999998


Q ss_pred             h-hhHHHHHhcccCCCEEEEE
Q 019196          228 G-KLTKESLKLLNWGAQILVI  247 (344)
Q Consensus       228 ~-~~~~~~~~~l~~~G~~v~~  247 (344)
                      . ...+.+..+++.|-.++..
T Consensus        68 ~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          68 SATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             TTTHHHHHHHHHTTTSEEECC
T ss_pred             CcccHHHHHHHHHCCCcEEEe
Confidence            7 4567788888888877653

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.69  E-value=0.64  Score=34.50  Aligned_cols=90  Identities=22%  Similarity=0.275  Sum_probs=51.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEe-cCH-----HHHHHH-Hhc-CC-c-EEEeCCCCCchhhHHHHHHHhcCC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVA-RGA-----EKIKFL-KSL-GV-D-HVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~-~~~-----~~~~~~-~~~-g~-~-~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      +|.|.|++|-+|+-.++++..+ ..++..+. ++.     ++.... ..+ +. + ......+...           ...
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~   71 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRD-----------FSA   71 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGG-----------TCT
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhh-----------hhc
Confidence            6899999999999999999887 55664432 221     122222 111 11 1 1111111111           135


Q ss_pred             CccEEEeCCChhhHHHHH-hcccCCCEEEEEec
Q 019196          218 GVDVLYDPVGGKLTKESL-KLLNWGAQILVIGF  249 (344)
Q Consensus       218 ~~d~vid~~g~~~~~~~~-~~l~~~G~~v~~g~  249 (344)
                      ..|++|-|.+........ ..+..+-++++.+.
T Consensus        72 ~~dvvf~alp~~~s~~~~~~~~~~~~~vIDlSa  104 (179)
T d2g17a1          72 DVDVVFLATAHEVSHDLAPQFLQAGCVVFDLSG  104 (179)
T ss_dssp             TCCEEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred             ccceeeccccchhHHHHhhhhhhcCceeecccc
Confidence            689999999986655544 44555556766553

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.68  E-value=0.54  Score=35.83  Aligned_cols=31  Identities=16%  Similarity=0.369  Sum_probs=28.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      -|+|+|+ |..|+.++..|..+|.+|.++.+.
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            3789999 999999999999999999999864

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.49  E-value=0.38  Score=39.64  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=26.8

Q ss_pred             EEEEecCCChHHHHHHHHHH-----HcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGK-----VCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~-----~~g~~v~~~~~~~  181 (344)
                      -|+|.|| |..|++++..+.     ..|.+|+++++++
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            4899999 999999998874     4689999998763

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=83.44  E-value=2.3  Score=34.96  Aligned_cols=94  Identities=21%  Similarity=0.271  Sum_probs=61.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHH-HHcCC-eEEEEecCHHHHHHH-Hhc----CCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019196          145 SSGQVLLVLGAAGGVGVAAVQIG-KVCGA-TIIAVARGAEKIKFL-KSL----GVDHVVDLSNESVIPSVKEFLKARKLK  217 (344)
Q Consensus       145 ~~~~~vlI~g~~g~~G~~~~~~~-~~~g~-~v~~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (344)
                      +..+++.|+|+ |..+...++.+ ..++. +|.+.++++++.+.+ +++    |.. +....+      .++..     .
T Consensus       126 ~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~-v~~~~s------~~eav-----~  192 (340)
T d1x7da_         126 PNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLT-IRRASS------VAEAV-----K  192 (340)
T ss_dssp             TTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCE-EEECSS------HHHHH-----T
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCC-ceecCC------HHHHH-----h
Confidence            34578999999 98888777655 45566 799999998865543 433    332 221221      22221     5


Q ss_pred             CccEEEeCCChh----hHHHHHhcccCCCEEEEEeccCCC
Q 019196          218 GVDVLYDPVGGK----LTKESLKLLNWGAQILVIGFASGE  253 (344)
Q Consensus       218 ~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~  253 (344)
                      +.|+|+-|+.+.    .+.  ..+++|+-.+..+|.....
T Consensus       193 ~ADIi~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~p~  230 (340)
T d1x7da_         193 GVDIITTVTADKAYATIIT--PDMLEPGMHLNAVGGDCPG  230 (340)
T ss_dssp             TCSEEEECCCCSSEEEEEC--GGGCCTTCEEEECSCCBTT
T ss_pred             cCCceeeccccCCCCcccc--hhhcCCCCEEeecccchhh
Confidence            789999887542    233  3688999999999876544

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=83.40  E-value=7.8  Score=29.56  Aligned_cols=94  Identities=14%  Similarity=0.153  Sum_probs=53.3

Q ss_pred             CEEEEecCCCh----HHHHHHHHHHHc--CCeEEEE-ecCHHHHH-HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCc
Q 019196          148 QVLLVLGAAGG----VGVAAVQIGKVC--GATIIAV-ARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV  219 (344)
Q Consensus       148 ~~vlI~g~~g~----~G~~~~~~~~~~--g~~v~~~-~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  219 (344)
                      =+|.|+|. |.    ++......++..  +++++++ +++.++.+ .+++++......+++      .+++.   ....+
T Consensus        17 irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~------~~~l~---~~~~i   86 (237)
T d2nvwa1          17 IRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDS------LESFA---QYKDI   86 (237)
T ss_dssp             EEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESC------HHHHH---HCTTC
T ss_pred             eEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecc------hhhcc---ccccc
Confidence            37899998 54    333334444443  5687754 55555544 346676443222222      33333   23579


Q ss_pred             cEEEeCCChh-hHHHHHhcccCC-----CEEEEEeccC
Q 019196          220 DVLYDPVGGK-LTKESLKLLNWG-----AQILVIGFAS  251 (344)
Q Consensus       220 d~vid~~g~~-~~~~~~~~l~~~-----G~~v~~g~~~  251 (344)
                      |+|+.|+... ..+.+..++..+     ++-+++..+.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            9999999874 455555665543     4567776443

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.20  E-value=0.65  Score=35.36  Aligned_cols=30  Identities=33%  Similarity=0.450  Sum_probs=27.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      |+|+|+ |+.|+.++..|...|.+|+++.+.
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            788999 999999999999999999999754

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.20  E-value=0.59  Score=36.02  Aligned_cols=32  Identities=28%  Similarity=0.288  Sum_probs=28.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      -|+|+|+ |+.|+.++..+...|.+|++++..+
T Consensus         8 DviIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            4789999 9999999999999999999998653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=83.18  E-value=1.4  Score=34.69  Aligned_cols=33  Identities=21%  Similarity=0.294  Sum_probs=29.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR  179 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~  179 (344)
                      .+++|+|.|. |.+|..+++.+...|++|++++.
T Consensus        35 ~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            5789999998 99999999999999999987764

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.16  E-value=0.54  Score=36.13  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=28.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      -|+|+|+ |+.|+.++..|...|.+|++++..
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            4789999 999999999999999999999865

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.08  E-value=0.57  Score=35.84  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=28.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .++|+|+ |+.|+.++..+..+|.+|+++...
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            4789999 999999999999999999999864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.04  E-value=0.98  Score=30.63  Aligned_cols=34  Identities=21%  Similarity=0.285  Sum_probs=27.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCH
Q 019196          147 GQVLLVLGAAGGVGVAAVQIGKVC---GATIIAVARGA  181 (344)
Q Consensus       147 ~~~vlI~g~~g~~G~~~~~~~~~~---g~~v~~~~~~~  181 (344)
                      .++++|+|+ |.+|.-.+..+..+   |.+|+++.+++
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999999 99999888776544   77999988764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.02  E-value=0.49  Score=38.40  Aligned_cols=32  Identities=13%  Similarity=0.277  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .|+|+|| |..|+.++..+...|.+|++++.++
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4899999 9999999999988899999999764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.02  E-value=0.92  Score=32.65  Aligned_cols=35  Identities=29%  Similarity=0.457  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCH
Q 019196          146 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGA  181 (344)
Q Consensus       146 ~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~  181 (344)
                      -+++|+|+|| |-+|.=++..+.++|+ .|+++.+.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4678999999 9999999988888998 577776643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.95  E-value=1.1  Score=33.58  Aligned_cols=39  Identities=18%  Similarity=0.175  Sum_probs=32.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCHHHHHHHHh
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS  189 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~  189 (344)
                      +|.|.|. |-+|+..+..+ +.|.+|++.+.++++.+.+++
T Consensus         2 kI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence            5788888 99999888766 469999999999998887754

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.75  E-value=0.46  Score=34.91  Aligned_cols=96  Identities=17%  Similarity=0.184  Sum_probs=53.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CCeEEEEecC--HHHHHHHHh----cC---CcE-------EEe------CCCCCc
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC---GATIIAVARG--AEKIKFLKS----LG---VDH-------VVD------LSNESV  203 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~---g~~v~~~~~~--~~~~~~~~~----~g---~~~-------v~~------~~~~~~  203 (344)
                      +|.|.|- |.+|.++.+.+-..   +.+|+++-..  .+....+-+    .|   ...       .++      +...+.
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            6889998 99999999876532   3577766433  344444422    12   110       000      111111


Q ss_pred             hhhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          204 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                          +++-+.  ..++|+|+||+|. ...+.+...+..+-+-|.+..+.
T Consensus        81 ----~~i~W~--~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          81 ----SKLPWK--DLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             ----GGSCHH--HHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----hhCCcc--ccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence                111111  1269999999997 45566667777776556665443

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.66  E-value=0.59  Score=34.95  Aligned_cols=32  Identities=13%  Similarity=0.086  Sum_probs=28.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      .+|+|+|+ |+.|+.++..+...|.++++++..
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            57999999 999999999899999999888743

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.44  E-value=0.59  Score=37.81  Aligned_cols=32  Identities=28%  Similarity=0.538  Sum_probs=28.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      -|+|+|+ |..|+.++.-|...|++|++++..+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4899999 9999999999999999999998753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.43  E-value=0.57  Score=38.38  Aligned_cols=31  Identities=23%  Similarity=0.430  Sum_probs=28.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      |+|+|+ |..|+.++..++..|.+|++++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789999 9999999999999999999998653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=82.35  E-value=0.61  Score=36.88  Aligned_cols=32  Identities=19%  Similarity=0.185  Sum_probs=28.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA  181 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~~  181 (344)
                      .|+|+|+ |.+|+.++.-+...|.+|+++++.+
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899999 9999999988888899999999753

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.88  E-value=3  Score=28.67  Aligned_cols=58  Identities=22%  Similarity=0.304  Sum_probs=45.3

Q ss_pred             HhcCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCHHHHHHHHhcCCcEEEe
Q 019196          140 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVD  197 (344)
Q Consensus       140 ~~~~~~~~~~vlI~g~~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  197 (344)
                      ..+++..-+.+++.-.+-..-+.+++.++.+|. ++++...+++..+.++++|++.+++
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            566777767666654445667888889999887 6888888888888899999998885

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.73  E-value=6.8  Score=28.21  Aligned_cols=96  Identities=15%  Similarity=0.208  Sum_probs=55.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEec---CHHHHHHHHhc----C---CcE-------EEe------CCCCCch
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVAR---GAEKIKFLKSL----G---VDH-------VVD------LSNESVI  204 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~---~~~~~~~~~~~----g---~~~-------v~~------~~~~~~~  204 (344)
                      +|.|.|- |.+|.++...+-.. ..+++++-.   +.+....+-++    |   ...       .++      +...+. 
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p-   79 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP-   79 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG-
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCCh-
Confidence            5889998 99999999887654 457776653   23445555332    2   111       000      111111 


Q ss_pred             hhHHHHHHHhcCCCccEEEeCCCh-hhHHHHHhcccCCCEEEEEeccC
Q 019196          205 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS  251 (344)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  251 (344)
                         .++-+.  ..++|+|+||+|. ...+.+...+..+.+-|.+..+.
T Consensus        80 ---~~i~W~--~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          80 ---SQIPWG--KCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             ---GGCCHH--HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             ---HHcccc--ccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence               111111  1379999999997 34455667777776666665543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.54  E-value=0.82  Score=34.78  Aligned_cols=30  Identities=30%  Similarity=0.422  Sum_probs=27.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      ++|+|+ |+.|+.++..+...|.+|.+++..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            788999 999999999999999999999754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.49  E-value=0.67  Score=38.07  Aligned_cols=33  Identities=15%  Similarity=0.254  Sum_probs=27.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCH
Q 019196          148 QVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGA  181 (344)
Q Consensus       148 ~~vlI~g~~g~~G~~~~~~~~~~g--~~v~~~~~~~  181 (344)
                      ++|+|+|| |..|++++..++..|  .+|++..+++
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            68999999 999999987665554  5899999874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=81.04  E-value=0.19  Score=36.18  Aligned_cols=89  Identities=16%  Similarity=0.095  Sum_probs=47.7

Q ss_pred             EEEEecCCChHHHHHHHHHH-Hc---CCeEEEEecCHHHHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEEe
Q 019196          149 VLLVLGAAGGVGVAAVQIGK-VC---GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD  224 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~-~~---g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (344)
                      +|.|+|++|-+|+-.++++. +.   ..++....++...-+ .-.++.+........+    ...      ....|++|-
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~~~~~~~~~~~~~~~----~~~------~~~~DvvF~   70 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-APNFGKDAGMLHDAFD----IES------LKQLDAVIT   70 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CCCSSSCCCBCEETTC----HHH------HTTCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-ccccCCcceeeecccc----hhh------hccccEEEE
Confidence            58999999999999997553 22   346665554422111 0011111110000011    111      146899999


Q ss_pred             CCChhhHHHHHhcccCCC---EEEEEe
Q 019196          225 PVGGKLTKESLKLLNWGA---QILVIG  248 (344)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G---~~v~~g  248 (344)
                      |++..........+...|   .+++.+
T Consensus        71 alp~~~s~~~~~~l~~~g~~~~VIDlS   97 (147)
T d1mb4a1          71 CQGGSYTEKVYPALRQAGWKGYWIDAA   97 (147)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred             ecCchHHHHHhHHHHHcCCceEEEeCC
Confidence            999877666555444444   366543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=80.69  E-value=4.5  Score=28.26  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=28.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCHHHH
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKI  184 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~  184 (344)
                      +|.|.|+ |.+|...+..+...+.  ++...+.++++.
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~   38 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP   38 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence            4788998 9999999888887764  899999876643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=80.23  E-value=0.79  Score=36.35  Aligned_cols=30  Identities=30%  Similarity=0.331  Sum_probs=27.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 019196          150 LLVLGAAGGVGVAAVQIGKVCGATIIAVARG  180 (344)
Q Consensus       150 vlI~g~~g~~G~~~~~~~~~~g~~v~~~~~~  180 (344)
                      |+|+|+ |.+|+.++.-+...|.+|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            899999 999999999888899999999875

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=80.15  E-value=0.22  Score=40.93  Aligned_cols=25  Identities=32%  Similarity=0.236  Sum_probs=21.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVCGAT  173 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~g~~  173 (344)
                      +|||+|++|-+|..++..+...|..
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~   26 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYP   26 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCC
Confidence            6999999999999999988777653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.11  E-value=1.6  Score=32.13  Aligned_cols=88  Identities=23%  Similarity=0.254  Sum_probs=49.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCHHHHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCCccEEE
Q 019196          149 VLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY  223 (344)
Q Consensus       149 ~vlI~g~~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (344)
                      +|.|+|++|-+|.-.++++..+ ..++..+.++...-+...+    +-.+..  ....+    .+++.     ...|++|
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~--~~~~~----~~~~~-----~~~dvvf   71 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSI--LSEFD----PEKVS-----KNCDVLF   71 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCB--CBCCC----HHHHH-----HHCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhcccc--ccccC----HhHhc-----cccceEE
Confidence            6899999999999999988776 4466655444321121211    111111  11111    11221     2589999


Q ss_pred             eCCChhhHHHHHhcccCCCEEEEEe
Q 019196          224 DPVGGKLTKESLKLLNWGAQILVIG  248 (344)
Q Consensus       224 d~~g~~~~~~~~~~l~~~G~~v~~g  248 (344)
                      -|.+........... .+-++++.+
T Consensus        72 ~a~p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          72 TALPAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             ECCSTTHHHHHHTTC-CSCEEEESS
T ss_pred             EccccHHHHHHHHhh-ccceEEecC
Confidence            999986555544433 445666543